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ONTOLOGY REPORT - ANNOTATIONS

Term:rRNA catabolic process
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Accession:GO:0016075 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of rRNA, ribosomal RNA, a structural constituent of ribosomes.
Synonyms:exact_synonym: rRNA breakdown;   rRNA catabolism;   rRNA degradation

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rRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936511:8,082,909...8,105,203
Ensembl chrNW_004936511:8,082,406...8,108,233 		JBrowse link
G Dis3l DIS3 like exosome 3'-5' exoribonuclease involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:26,477,014...26,515,380
Ensembl chrNW_004936471:26,477,166...26,515,995 		JBrowse link
G Ern2 endoplasmic reticulum to nucleus signaling 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,332,507...8,350,176
Ensembl chrNW_004936501:8,332,601...8,350,176 		JBrowse link
G Exosc4 exosome component 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:8,097,218...8,099,319
Ensembl chrNW_004936470:8,097,267...8,099,201 		JBrowse link
G Exosc5 exosome component 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936661:3,790,283...3,799,602
Ensembl chrNW_004936661:3,790,302...3,799,660 		JBrowse link
G Exosc6 exosome component 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:23,295,441...23,297,321
Ensembl chrNW_004936475:23,295,500...23,296,318 		JBrowse link
G Exosc7 exosome component 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936695:748,645...776,767
Ensembl chrNW_004936695:750,640...777,113 		JBrowse link
G Exosc8 exosome component 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936472:31,112,733...31,115,639 JBrowse link
G Exosc9 exosome component 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936662:1,062,461...1,073,425
Ensembl chrNW_004936662:1,062,527...1,074,772 		JBrowse link
G LOC101957349 exosome complex component RRP43-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936546:1,032,311...1,033,274 JBrowse link
G Trir telomerase RNA component interacting RNase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,847,065...1,850,557
Ensembl chrNW_004936659:1,846,541...1,850,565 		JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936540:3,959,156...4,073,785
Ensembl chrNW_004936540:3,963,387...4,073,322 		JBrowse link
nonfunctional rRNA decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pelo pelota mRNA surveillance and ribosome rescue factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936480:14,578,718...14,580,690
Ensembl chrNW_004936480:14,577,381...14,582,144 		JBrowse link
regulation of rRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx49 DEAD-box helicase 49 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:2,414,380...2,422,730
Ensembl chrNW_004936596:2,413,505...2,422,759 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16037
    cellular process 15650
      metabolic process 9980
        catabolic process 2417
          macromolecule catabolic process 1356
            nucleic acid catabolic process 320
              RNA catabolic process 290
                rRNA catabolic process 14
                  cytoplasmic polyadenylation-dependent rRNA catabolic process 0
                  nonfunctional rRNA decay 1
                  regulation of rRNA catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 16037
    cellular process 15650
      metabolic process 9980
        primary metabolic process 8867
          nucleobase-containing compound metabolic process 4939
            nucleic acid metabolic process 4448
              RNA metabolic process 3940
                RNA catabolic process 290
                  rRNA catabolic process 14
                    cytoplasmic polyadenylation-dependent rRNA catabolic process 0
                    nonfunctional rRNA decay 1
                    regulation of rRNA catabolic process + 1
paths to the root