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ONTOLOGY REPORT - ANNOTATIONS

Term:rRNA catabolic process
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Accession:GO:0016075 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of rRNA, ribosomal RNA, a structural constituent of ribosomes.
Synonyms:exact_synonym: rRNA breakdown;   rRNA catabolism;   rRNA degradation


show annotations for term's descendants           Sort by:
rRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr11:45,046,040...45,075,973
Ensembl chr11:45,044,508...45,075,963 		JBrowse link
G DIS3L DIS3 like exosome 3'-5' exoribonuclease involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:164,310,120...164,352,182
Ensembl chr 1:164,310,448...164,353,537 		JBrowse link
G ERN2 endoplasmic reticulum to nucleus signaling 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:22,510,067...22,537,872
Ensembl chr 3:22,510,558...22,537,868 		JBrowse link
G EXOSC4 exosome component 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:618,993...621,336
Ensembl chr 4:618,990...621,342 		JBrowse link
G EXOSC5 exosome component 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:49,373,378...49,381,875
Ensembl chr 6:49,373,379...49,382,034 		JBrowse link
G EXOSC6 exosome component 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:13,295,591...13,296,942
Ensembl chr 6:13,295,125...13,296,914 		JBrowse link
G EXOSC7 exosome component 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:28,176,806...28,206,435
Ensembl chr13:28,176,793...28,208,975 		JBrowse link
G SLFN11 schlafen family member 11 involved_in ISO PMID:29563550 UniProt PMID:29563550 RGD:13601999 NCBI chr12:39,974,519...39,996,257
Ensembl chr12:39,974,730...39,996,255 		JBrowse link
G SLFN14 schlafen family member 14 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:39,947,791...39,962,823
Ensembl chr12:39,950,458...39,962,820 		JBrowse link
G TRIR telomerase RNA component interacting RNase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:66,262,377...66,265,427
Ensembl chr 2:66,262,424...66,265,426 		JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr13:83,063,810...83,174,497
Ensembl chr13:83,065,957...83,174,477 		JBrowse link
nonfunctional rRNA decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PELO pelota mRNA surveillance and ribosome rescue factor involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:32,130,254...32,146,114
Ensembl chr16:32,142,034...32,148,287 		JBrowse link
regulation of rRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX49 DEAD-box helicase 49 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,922,985...58,930,710
Ensembl chr 2:58,922,988...58,930,716 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17667
    cellular process 17205
      metabolic process 10557
        catabolic process 2565
          macromolecule catabolic process 1481
            nucleic acid catabolic process 388
              RNA catabolic process 359
                rRNA catabolic process 13
                  cytoplasmic polyadenylation-dependent rRNA catabolic process 0
                  nonfunctional rRNA decay 1
                  regulation of rRNA catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 17667
    cellular process 17205
      metabolic process 10557
        primary metabolic process 9295
          nucleobase-containing compound metabolic process 5226
            nucleic acid metabolic process 4719
              RNA metabolic process 4189
                RNA catabolic process 359
                  rRNA catabolic process 13
                    cytoplasmic polyadenylation-dependent rRNA catabolic process 0
                    nonfunctional rRNA decay 1
                    regulation of rRNA catabolic process + 1
paths to the root