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ONTOLOGY REPORT - ANNOTATIONS

Term:rRNA catabolic process
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Accession:GO:0016075 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of rRNA, ribosomal RNA, a structural constituent of ribosomes.
Synonyms:exact_synonym: rRNA breakdown;   rRNA catabolism;   rRNA degradation

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rRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:27,760,665...27,786,403
Ensembl chrNW_004624751:27,760,776...27,785,613 		JBrowse link
G Dis3l DIS3 like exosome 3'-5' exoribonuclease involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624781:6,326,815...6,357,778
Ensembl chrNW_004624781:6,326,815...6,357,563 		JBrowse link
G Ern2 endoplasmic reticulum to nucleus signaling 2 involved_in ISO (PMID:11175748) UniProt PMID:11175748 NCBI chrNW_004624782:8,823,114...8,840,073
Ensembl chrNW_004624782:8,823,146...8,840,280 		JBrowse link
G Exosc4 exosome component 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:12,744,266...12,746,253
Ensembl chrNW_004624735:12,744,266...12,746,289 		JBrowse link
G Exosc5 exosome component 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:197,666...203,595
Ensembl chrNW_004624907:197,666...203,600 		JBrowse link
G Exosc7 exosome component 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:75,541,677...75,561,826
Ensembl chrNW_004624730:75,541,568...75,561,767 		JBrowse link
G Exosc9 exosome component 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624777:2,087,005...2,097,473 JBrowse link
G Slfn14 schlafen family member 14 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624875:3,058,460...3,071,325
Ensembl chrNW_004624875:3,058,591...3,070,651 		JBrowse link
G Trir telomerase RNA component interacting RNase involved_in ISO (PMID:28322335) UniProt PMID:28322335 NCBI chrNW_004624901:356,151...360,001 JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:18,903,506...19,021,392
Ensembl chrNW_004624730:18,907,959...19,020,724 		JBrowse link
nonfunctional rRNA decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pelo pelota mRNA surveillance and ribosome rescue factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624759:6,525,529...6,527,320
Ensembl chrNW_004624759:6,525,418...6,527,322 		JBrowse link
regulation of rRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx49 DEAD-box helicase 49 involved_in ISO (PMID:29618122) CACAO PMID:29618122 NCBI chrNW_004624908:1,963,701...1,970,634
Ensembl chrNW_004624908:1,963,738...1,970,634 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15172
    cellular process 14790
      metabolic process 9450
        catabolic process 2288
          macromolecule catabolic process 1289
            nucleic acid catabolic process 314
              RNA catabolic process 284
                rRNA catabolic process 12
                  cytoplasmic polyadenylation-dependent rRNA catabolic process 0
                  nonfunctional rRNA decay 1
                  regulation of rRNA catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 15172
    cellular process 14790
      metabolic process 9450
        primary metabolic process 8379
          nucleobase-containing compound metabolic process 4594
            nucleic acid metabolic process 4132
              RNA metabolic process 3635
                RNA catabolic process 284
                  rRNA catabolic process 12
                    cytoplasmic polyadenylation-dependent rRNA catabolic process 0
                    nonfunctional rRNA decay 1
                    regulation of rRNA catabolic process + 1
paths to the root