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ONTOLOGY REPORT - ANNOTATIONS

Term:rRNA catabolic process
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Accession:GO:0016075 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of rRNA, ribosomal RNA, a structural constituent of ribosomes.
Synonyms:exact_synonym: rRNA breakdown;   rRNA catabolism;   rRNA degradation

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rRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in ISO (PMID:20368444) UniProt PMID:20368444 NCBI chrNW_004955404:33,897,681...33,924,069
Ensembl chrNW_004955404:33,897,237...33,924,069 		JBrowse link
G Dis3l DIS3 like exosome 3'-5' exoribonuclease involved_in ISO (PMID:20368444)
(PMID:20531389)		 UniProt PMID:20368444 PMID:20531389 NCBI chrNW_004955450:9,279,323...9,313,402
Ensembl chrNW_004955450:9,279,323...9,314,507 		JBrowse link
G Ern2 endoplasmic reticulum to nucleus signaling 2 involved_in ISO (PMID:11175748) UniProt PMID:11175748 NCBI chrNW_004955493:2,217,187...2,233,920
Ensembl chrNW_004955493:2,217,384...2,233,920 		JBrowse link
G Slfn11 schlafen family member 11 involved_in ISO PMID:29563550 UniProt PMID:29563550 RGD:13601999 NCBI chrNW_004955481:9,885,798...9,900,330 JBrowse link
G Slfn14 schlafen family member 14 involved_in ISO (PMID:25996083) UniProt PMID:25996083 NCBI chrNW_004955481:10,037,941...10,046,549
Ensembl chrNW_004955481:10,037,941...10,046,549 		JBrowse link
G Trir telomerase RNA component interacting RNase involved_in ISO (PMID:28322335) UniProt PMID:28322335 NCBI chrNW_004955415:31,831,093...31,834,796
Ensembl chrNW_004955415:31,831,093...31,834,796 		JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO (PMID:20368444) UniProt PMID:20368444 NCBI chrNW_004955508:3,441,540...3,561,896
Ensembl chrNW_004955508:3,441,683...3,561,805 		JBrowse link
regulation of rRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx49 DEAD-box helicase 49 involved_in ISO (PMID:29618122) CACAO PMID:29618122 NCBI chrNW_004955524:2,760,692...2,767,709
Ensembl chrNW_004955524:2,760,860...2,767,665 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12572
    cellular process 12010
      metabolic process 7974
        catabolic process 1974
          macromolecule catabolic process 1149
            nucleic acid catabolic process 273
              RNA catabolic process 248
                rRNA catabolic process 8
                  cytoplasmic polyadenylation-dependent rRNA catabolic process 0
                  nonfunctional rRNA decay 0
                  regulation of rRNA catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 12572
    cellular process 12010
      metabolic process 7974
        primary metabolic process 7007
          nucleobase-containing compound metabolic process 3910
            nucleic acid metabolic process 3521
              RNA metabolic process 3058
                RNA catabolic process 248
                  rRNA catabolic process 8
                    cytoplasmic polyadenylation-dependent rRNA catabolic process 0
                    nonfunctional rRNA decay 0
                    regulation of rRNA catabolic process + 1
paths to the root