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ONTOLOGY REPORT - ANNOTATIONS

Term:rRNA catabolic process
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Accession:GO:0016075 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of rRNA, ribosomal RNA, a structural constituent of ribosomes.
Synonyms:exact_synonym: rRNA breakdown;   rRNA catabolism;   rRNA degradation


show annotations for term's descendants           Sort by:
rRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr13:53,982,914...54,011,076
Ensembl chr13:72,760,610...72,787,325 		JBrowse link
G DIS3L DIS3 like exosome 3'-5' exoribonuclease involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr15:45,246,867...45,287,521
Ensembl chr15:63,523,512...63,563,813 		JBrowse link
G ERN2 endoplasmic reticulum to nucleus signaling 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:14,397,697...14,420,618
Ensembl chr16:23,940,716...23,963,894 		JBrowse link
G EXOSC4 exosome component 4 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr 8:143,837,256...143,839,292 JBrowse link
G EXOSC5 exosome component 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr19:38,379,884...38,391,309
Ensembl chr19:46,886,326...46,897,703 		JBrowse link
G EXOSC7 exosome component 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:44,877,339...44,913,510
Ensembl chr 3:45,932,343...46,023,269 		JBrowse link
G EXOSC8 exosome component 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:18,208,074...18,217,426
Ensembl chr13:36,638,406...36,647,273 		JBrowse link
G EXOSC9 exosome component 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:114,001,770...114,017,395
Ensembl chr 4:125,138,668...125,154,288 		JBrowse link
G SLFN11 schlafen family member 11 involved_in ISO PMID:29563550 UniProt PMID:29563550 RGD:13601999 NCBI chr17:21,412,361...21,436,650
Ensembl chr17:21,715,569...21,727,019 		JBrowse link
G SLFN12 schlafen family member 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,359,252...21,384,308
Ensembl chr17:21,652,566...21,676,326 		JBrowse link
G SLFN13 schlafen family member 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:21,343,027...21,354,521
Ensembl chr17:21,641,078...21,646,159 		JBrowse link
G SLFN14 schlafen family member 14 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr17:21,232,934...21,250,368
Ensembl chr17:21,530,009...21,539,589 		JBrowse link
G TRIR telomerase RNA component interacting RNase involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:12,293,236...12,297,338
Ensembl chr19:13,038,837...13,046,866 		JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 3:139,337,337...139,481,479
Ensembl chr 3:146,930,988...147,073,827 		JBrowse link
nonfunctional rRNA decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PELO pelota mRNA surveillance and ribosome rescue factor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 5:61,229,841...61,247,565
Ensembl chr 5:62,851,099...62,865,786 		JBrowse link
regulation of rRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX49 DEAD-box helicase 49 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:18,357,682...18,366,614
Ensembl chr19:19,364,949...19,373,869 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16644
    cellular process 16207
      metabolic process 10770
        catabolic process 2488
          macromolecule catabolic process 1380
            nucleic acid catabolic process 324
              RNA catabolic process 294
                rRNA catabolic process 16
                  cytoplasmic polyadenylation-dependent rRNA catabolic process 0
                  nonfunctional rRNA decay 1
                  regulation of rRNA catabolic process + 1
Path 2
Term Annotations click to browse term
  biological_process 16644
    cellular process 16207
      metabolic process 10770
        primary metabolic process 9466
          nucleobase-containing compound metabolic process 5308
            nucleic acid metabolic process 4796
              RNA metabolic process 4268
                RNA catabolic process 294
                  rRNA catabolic process 16
                    cytoplasmic polyadenylation-dependent rRNA catabolic process 0
                    nonfunctional rRNA decay 1
                    regulation of rRNA catabolic process + 1
paths to the root