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ONTOLOGY REPORT - ANNOTATIONS


Term:mRNA metabolic process
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Accession:GO:0016071 term browser browse the term
Definition:The chemical reactions and pathways involving mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.
Synonyms:exact_synonym: mRNA metabolism


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mRNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cebpg CCAAT/enhancer binding protein gamma ISO MGI:MGI:2177053 (MGI:MGI:1202156|PMID:9494081) RGD PMID:9494081 MGI:MGI:1202156 NCBI chr 1:91,286,956...91,297,459
Ensembl chr 1:91,287,917...91,296,656
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO (MGI:MGI:6286426|PMID:25921091) RGD PMID:25921091 MGI:MGI:6286426 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Tbrg4 transforming growth factor beta regulator 4 ISO
ISS
(PMID:28335001)
GO_REF:0000024
RGD
UniProt
PMID:28335001 GO_REF:0000024 NCBI chr14:86,876,800...86,885,603
Ensembl chr14:86,877,627...86,885,584
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 ISO (PMID:21336257) RGD PMID:21336257 NCBI chr 1:255,660,165...255,842,671
Ensembl chr 1:255,665,238...255,815,733
JBrowse link
G Dhx36 DEAH-box helicase 36 ISS
ISO
GO_REF:0000024
(PMID:26489465)
UniProt
RGD
PMID:26489465 GO_REF:0000024 NCBI chr 2:152,785,844...152,824,549
Ensembl chr 2:152,785,844...152,824,547
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 ISO (PMID:28297718) RGD PMID:28297718 NCBI chr18:29,608,588...29,611,212
Ensembl chr18:29,608,588...29,611,212
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IMP RGD PMID:20805360 RGD:10042974 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578
JBrowse link
G Khsrp KH-type splicing regulatory protein IEA
ISO
ISS
GO_REF:0000107
(PMID:16126846), (PMID:28275056)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16126846, PMID:28275056 GO_REF:0000024, GO_REF:0000107 NCBI chr 9:10,013,795...10,023,670
Ensembl chr 9:10,013,854...10,022,924
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase ISO (PMID:24726324) RGD PMID:24726324 NCBI chr 2:207,277,088...207,301,245
Ensembl chr 2:207,278,161...207,300,854
JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 ISO
IBA
(PMID:29180010)
PMID:21873635
(MGI:MGI:6105829|PMID:27616329)
RGD PMID:27616329, PMID:29180010, PMID:21873635 MGI:MGI:6105829, RGD:13792537 NCBI chr 5:173,646,055...173,654,140
Ensembl chr 5:173,646,195...173,653,905
JBrowse link
G Qk quaking ISO (MGI:MGI:5316962|PMID:20631256) RGD PMID:20631256 MGI:MGI:5316962 NCBI chr 1:50,983,647...51,050,692 JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:24375645) RGD PMID:24375645 NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 ISO (MGI:MGI:5706859|PMID:26000482), (MGI:MGI:5751631|PMID:26255671) RGD PMID:26000482, PMID:26255671 MGI:MGI:5706859, MGI:MGI:5751631 NCBI chr13:78,723,028...78,794,663
Ensembl chr13:78,722,763...78,789,266
JBrowse link
G Tardbp TAR DNA binding protein ISO (PMID:28335005) RGD PMID:28335005 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048
JBrowse link
G Trim71 tripartite motif containing 71 ISO (PMID:23125361) RGD PMID:23125361 NCBI chr 8:122,553,015...122,604,787
Ensembl chr 8:122,553,015...122,604,787
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase ISO (PMID:24726324), (PMID:26255671) RGD PMID:24726324, PMID:26255671 NCBI chr16:20,824,888...20,845,632
Ensembl chr16:20,824,864...20,845,243
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A ISO
IBA
ISS
(PMID:19909337)
PMID:21873635
(MGI:MGI:3842851|PMID:19322177), (MGI:MGI:5706859|PMID:26000482), (MGI:MGI:5706909|PMID:23185455), (MGI:MGI:5707103|PMID:26134560), (MGI:MGI:5751631|PMID:26255671)
GO_REF:0000024
RGD
UniProt
PMID:19322177, PMID:19909337, PMID:23185455, PMID:26000482, PMID:26134560, PMID:26255671, PMID:21873635 GO_REF:0000024, MGI:MGI:3842851, MGI:MGI:5706859, MGI:MGI:5706909, MGI:MGI:5707103, MGI:MGI:5751631, RGD:13792537 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D ISO (MGI:MGI:5707103|PMID:26134560) RGD PMID:26134560 MGI:MGI:5707103 NCBI chr 1:1,937,620...1,972,919
Ensembl chr 1:1,938,419...1,972,918
JBrowse link
G Zfp36 zinc finger protein 36 IEA
ISO
ISS
GO_REF:0000107
(MGI:MGI:5784976|PMID:22701344), (MGI:MGI:5788345|PMID:27193233), (MGI:MGI:5795824|PMID:17288565)
(PMID:11719186), (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15687258), (PMID:15766526), (PMID:20221403), (PMID:27193233), (PMID:9703499)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9703499, PMID:11719186, PMID:14679154, PMID:15187101, PMID:15634918, PMID:15687258, PMID:15766526, PMID:17288565, PMID:20221403, PMID:22701344, PMID:27193233 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5784976, MGI:MGI:5788345, MGI:MGI:5795824 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:4818820|PMID:20622884), (MGI:MGI:5779430|PMID:27102483), (MGI:MGI:5784967|PMID:24733888), (MGI:MGI:5784968|PMID:24700863), (MGI:MGI:5784976|PMID:22701344)
(PMID:12198173), (PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:25014217), (PMID:25106868), (PMID:26542173)
UniProt
RGD
PMID:12198173, PMID:15467755, PMID:15538381, PMID:15687258, PMID:18326031, PMID:19179481, PMID:20622884, PMID:22701344, PMID:24700863, PMID:24733888, PMID:25014217, PMID:25106868, PMID:26542173, PMID:27102483 GO_REF:0000024, MGI:MGI:4818820, MGI:MGI:5779430, MGI:MGI:5784967, MGI:MGI:5784968, MGI:MGI:5784976 NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 ISO (PMID:25106868)
(MGI:MGI:4818820|PMID:20622884), (MGI:MGI:5784976|PMID:22701344)
RGD PMID:20622884, PMID:22701344, PMID:25106868 MGI:MGI:4818820, MGI:MGI:5784976 NCBI chr 6:7,417,416...7,423,447
Ensembl chr 6:7,417,425...7,421,456
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 ISO
IBA
(PMID:22547059)
PMID:21873635
RGD PMID:22547059, PMID:21873635 RGD:13792537 NCBI chr13:109,505,021...109,520,976
Ensembl chr13:109,505,697...109,520,419
JBrowse link
G Boll boule homolog, RNA binding protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:61,836,517...61,975,640
Ensembl chr 9:64,480,031...64,573,660
Ensembl chr 9:64,480,031...64,573,660
JBrowse link
G Dazl deleted in azoospermia-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:12,633,983...12,651,017
Ensembl chr 9:12,633,990...12,650,938
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISS
ISO
GO_REF:0000024
(MGI:MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)
UniProt
RGD
PMID:14517288, PMID:19029303, PMID:26489465, PMID:27616329, PMID:29180010 GO_REF:0000024, MGI:MGI:6105829 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 ISO
ISS
(PMID:12034726)
GO_REF:0000024
RGD
UniProt
PMID:12034726 GO_REF:0000024 NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 ISO (MGI:MGI:5306322|PMID:12456657) RGD PMID:12456657 MGI:MGI:5306322
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353
JBrowse link
G LOC108348134 protein boule-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:64,447,890...64,573,812
Ensembl chr 9:64,480,031...64,573,660
JBrowse link
G LOC681410 hypothetical protein LOC681410 IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:6,909,166...6,912,145
Ensembl chr17:6,909,728...6,910,630
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288, PMID:15014438, PMID:20932473 NCBI chr13:47,785,157...47,871,684
Ensembl chr13:47,785,161...47,831,110
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718
JBrowse link
G Rbm10 RNA binding motif protein 10 ISO
IEA
(MGI:MGI:4367529|PMID:19508861)
GO_REF:0000107
RGD
Ensembl
PMID:19508861 GO_REF:0000107, MGI:MGI:4367529 NCBI chr  X:1,754,869...1,786,973
Ensembl chr  X:1,754,861...1,786,978
JBrowse link
G Rbm38 RNA binding motif protein 38 ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:171,037,891...171,050,500
Ensembl chr 3:171,037,957...171,050,475
JBrowse link
G Tardbp TAR DNA binding protein ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048
JBrowse link
G Tirap TIR domain containing adaptor protein ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:36,382,029...36,399,625
Ensembl chr 8:36,385,353...36,388,224
JBrowse link
G Zfp36 zinc finger protein 36 ISO
ISS
(PMID:15014438)
GO_REF:0000024
RGD
UniProt
PMID:15014438 GO_REF:0000024 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569
JBrowse link
7-methylguanosine mRNA capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmtr1 cap methyltransferase 1 IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:20713356), (PMID:21310715)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20713356, PMID:21310715, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr20:8,324,968...8,385,174
Ensembl chr20:8,312,792...8,368,764
JBrowse link
G Cmtr2 cap methyltransferase 2 ISO
IBA
(PMID:21310715)
PMID:21873635
RGD PMID:21310715, PMID:21873635 RGD:13792537 NCBI chr19:41,426,536...41,433,367
Ensembl chr19:41,427,504...41,433,346
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 ISO
ISS
(PMID:12434151)
GO_REF:0000024
RGD
UniProt
PMID:12434151 GO_REF:0000024 NCBI chr 5:61,734,118...61,767,098
Ensembl chr 5:61,734,118...61,766,481
JBrowse link
G Ramac RNA guanine-7 methyltransferase activating subunit ISO (PMID:22099306) RGD PMID:22099306 NCBI chr 1:143,583,675...143,589,563
Ensembl chr 1:143,583,675...143,589,556
JBrowse link
G Rngtt RNA guanylyltransferase and 5'-phosphatase ISO
IBA
(PMID:9473487)
PMID:21873635
RGD PMID:9473487, PMID:21873635 RGD:13792537 NCBI chr 5:48,561,325...48,779,214
Ensembl chr 5:48,561,339...48,779,207
JBrowse link
G Rnmt RNA (guanine-7-) methyltransferase ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:27422871), (PMID:9790902)
UniProt
RGD
PMID:9790902, PMID:27422871, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr18:64,084,746...64,108,246
Ensembl chr18:64,084,795...64,108,246
JBrowse link
alternative mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07056845.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:43,601,513...43,602,285 JBrowse link
G Cdk13 cyclin-dependent kinase 13 ISO (MGI:MGI:3699439|PMID:17261272) RGD PMID:17261272 MGI:MGI:3699439 NCBI chr17:49,833,194...49,922,932
Ensembl chr17:49,833,400...49,921,550
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 ISO (PMID:19720736) RGD PMID:19720736 NCBI chr18:17,689,090...18,079,835
Ensembl chr18:17,698,038...17,716,880
JBrowse link
G Ddx17 DEAD-box helicase 17 ISO
IBA
(MGI:MGI:5883203|PMID:24910439)
PMID:21873635
(PMID:24275493), (PMID:24910439)
RGD PMID:24275493, PMID:24910439, PMID:21873635 MGI:MGI:5883203, RGD:13792537 NCBI chr 7:120,761,843...120,765,012
Ensembl chr 7:120,761,826...120,780,641
JBrowse link
G Ddx5 DEAD-box helicase 5 ISO (MGI:MGI:5883203|PMID:24910439)
(PMID:24275493), (PMID:24910439)
RGD PMID:24275493, PMID:24910439 MGI:MGI:5883203 NCBI chr10:94,979,759...94,988,461
Ensembl chr10:94,980,928...94,988,461
JBrowse link
G Dhx9 DExH-box helicase 9 ISO (PMID:28221134) RGD PMID:28221134 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Esrp1 epithelial splicing regulatory protein 1 ISO MGI:MGI:1924661 (MGI:MGI:5699497|PMID:26371508) RGD PMID:26371508 MGI:MGI:5699497 NCBI chr 5:24,576,988...24,631,758
Ensembl chr 5:24,576,991...24,631,698
JBrowse link
G Esrp2 epithelial splicing regulatory protein 2 ISO
IEA
MGI:MGI:1917326 (MGI:MGI:5699497|PMID:26371508)
GO_REF:0000107
RGD
Ensembl
PMID:26371508 GO_REF:0000107, MGI:MGI:5699497 NCBI chr19:38,113,412...38,120,578
Ensembl chr19:38,113,412...38,120,578
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO (MGI:MGI:3575934|PMID:15798186) RGD PMID:15798186 MGI:MGI:3575934 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M ISO
IBA
(PMID:19874820)
PMID:21873635
RGD PMID:19874820, PMID:21873635 RGD:13792537 NCBI chr 7:18,516,253...18,554,536
Ensembl chr 7:18,516,512...18,554,227
JBrowse link
G Insr insulin receptor IEP RGD PMID:23633480 RGD:9685423 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Kdm1a lysine demethylase 1A IEP RGD PMID:20164337 RGD:9588288 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 ISO MGI:MGI:3052922 (MGI:MGI:3821939|PMID:19075228), (MGI:MGI:5009479|PMID:19720736) RGD PMID:19075228, PMID:19720736 MGI:MGI:3821939, MGI:MGI:5009479 NCBI chr 2:150,698,248...150,867,791
Ensembl chr 2:150,756,185...150,869,690
JBrowse link
G Pqbp1 polyglutamine binding protein 1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(MGI:MGI:5477858|PMID:23512658)
(PMID:23512658)
Ensembl
UniProt
RGD
PMID:23512658 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5477858 NCBI chr  X:15,448,570...15,453,130
Ensembl chr  X:15,348,138...15,453,130
JBrowse link
G Puf60 poly-U binding splicing factor 60 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,129,237...117,140,234
Ensembl chr 7:117,129,237...117,140,214
JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 ISO MGI:MGI:6442563 (MGI:MGI:6402838|PMID:32109384) RGD PMID:32109384 MGI:MGI:6402838 NCBI chr 7:118,157,093...118,396,733
Ensembl chr 7:118,156,946...118,396,728
JBrowse link
G Rbm17 RNA binding motif protein 17 ISO
IBA
(PMID:17589525)
PMID:21873635
RGD PMID:17589525, PMID:21873635 RGD:13792537 NCBI chr17:70,586,345...70,603,289
Ensembl chr17:70,586,394...70,603,267
JBrowse link
G Rsrc1 arginine and serine rich coiled-coil 1 ISO
IBA
(MGI:MGI:3575934|PMID:15798186)
PMID:21873635
RGD PMID:15798186, PMID:21873635 MGI:MGI:3575934, RGD:13792537 NCBI chr 2:164,126,898...164,533,652 JBrowse link
G Scnm1 sodium channel modifier 1 ISO (MGI:MGI:3770352|PMID:17656373) RGD PMID:17656373 MGI:MGI:3770352 NCBI chr 2:196,300,239...196,304,419
Ensembl chr 2:196,300,239...196,304,169
JBrowse link
G Sfpq splicing factor proline and glutamine rich ISO
IBA
(PMID:19874820)
PMID:21873635
RGD PMID:19874820, PMID:21873635 RGD:13792537 NCBI chr 5:145,079,803...145,088,517
Ensembl chr 5:145,079,803...145,088,498
JBrowse link
G Sfswap splicing factor SWAP ISO
IEA
(MGI:MGI:84585|PMID:8940107)
GO_REF:0000107
RGD
Ensembl
PMID:8940107 GO_REF:0000107, MGI:MGI:84585 NCBI chr12:30,740,563...30,811,015
Ensembl chr12:30,740,520...30,811,054
JBrowse link
G Slu7 SLU7 homolog, splicing factor ISO
ISS
(PMID:15728250)
PMID:15181151
RGD PMID:15728250, PMID:15181151 RGD:1304333 NCBI chr10:29,029,556...29,044,919
Ensembl chr10:29,029,590...29,044,583
JBrowse link
G Smptb polypyrimidine tract-binding protein IDA RGD PMID:12578833 RGD:1299129 NCBI chr  X:17,484,839...17,486,721
Ensembl chr  X:17,484,839...17,486,721
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO
IMP
(PMID:8940107) RGD PMID:8940107, PMID:23462647 RGD:11038736 NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 ISO
IBA
ISS
(PMID:22767602)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:22767602, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:159,305,345...159,310,668
Ensembl chr 3:159,305,345...159,310,668
JBrowse link
cap1 mRNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmtr1 cap methyltransferase 1 IEA
IBA
ISS
ISO
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(PMID:21310715)
Ensembl
UniProt
RGD
PMID:21310715, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr20:8,324,968...8,385,174
Ensembl chr20:8,312,792...8,368,764
JBrowse link
G Cmtr2 cap methyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:41,426,536...41,433,367
Ensembl chr19:41,427,504...41,433,346
JBrowse link
cap2 mRNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmtr2 cap methyltransferase 2 ISO
IBA
(PMID:21310715)
PMID:21873635
RGD PMID:21310715, PMID:21873635 RGD:13792537 NCBI chr19:41,426,536...41,433,367
Ensembl chr19:41,427,504...41,433,346
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:70,885,503...70,922,278
Ensembl chr13:70,885,504...70,922,245
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:19029303)
Ensembl
RGD
PMID:19029303, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 ISO (PMID:19029303) RGD PMID:19029303 NCBI chr10:83,774,178...83,823,323
Ensembl chr10:83,780,203...83,822,996
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:19029303)
Ensembl
RGD
PMID:19029303, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342
JBrowse link
G Ybx1 Y box binding protein 1 ISO
ISS
(PMID:19029303)
GO_REF:0000024
RGD
UniProt
PMID:19029303 GO_REF:0000024 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07066144.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 9:3,921,406...3,965,939 JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 ISO MGI:MGI:109382 (MGI:MGI:3807625|PMID:18625844) RGD PMID:18625844 MGI:MGI:3807625 NCBI chr16:54,899,452...54,918,616
Ensembl chr16:54,899,452...54,918,613
JBrowse link
G Dcp1a decapping mRNA 1A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:6,542,415...6,583,856
Ensembl chr16:6,542,216...6,587,619
JBrowse link
G Dcp1b decapping mRNA 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:151,249,654...151,287,018
Ensembl chr 4:151,250,041...151,285,702
JBrowse link
G Dcp2 decapping mRNA 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:35,489,274...35,671,676
Ensembl chr18:35,489,274...35,672,291
JBrowse link
G Dcps decapping enzyme, scavenger IBA
IEA
PMID:21873635
GO_REF:0000104
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 8:36,321,992...36,374,665
Ensembl chr 8:36,321,993...36,374,673
JBrowse link
G LOC100909830 mRNA-decapping enzyme 2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:78,577,303...78,610,463
Ensembl chr18:78,584,312...78,607,983
JBrowse link
G LOC100912393 mRNA-decapping enzyme 2-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:3,940,948...3,965,964
Ensembl chr18:35,489,274...35,672,291
JBrowse link
G LOC103690064 m7GpppN-mRNA hydrolase-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:35,849,655...35,883,568
Ensembl chr18:35,850,132...35,876,585
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:71,046,475...71,057,883
Ensembl chr16:71,046,475...71,057,883
JBrowse link
G Noct nocturnin ISO MGI:MGI:1298230 (MGI:MGI:3807625|PMID:18625844) RGD PMID:18625844 MGI:MGI:3807625 NCBI chr 2:140,286,661...140,306,869
Ensembl chr 2:140,286,661...140,306,869
JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 ISO
IBA
(MGI:MGI:3807625|PMID:18625844)
PMID:21873635
RGD PMID:18625844, PMID:21873635 MGI:MGI:3807625, RGD:13792537 NCBI chr12:9,214,116...9,331,901
Ensembl chr12:9,216,536...9,331,195
JBrowse link
G Patl1 PAT1 homolog 1, processing body mRNA decay factor ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:20584987), (PMID:20852261)
UniProt
RGD
PMID:20584987, PMID:20852261, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:228,337,756...228,369,719
Ensembl chr 1:228,337,767...228,369,761
JBrowse link
G Patl2 PAT1 homolog 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:114,065,814...114,075,404
Ensembl chr 3:114,066,840...114,074,803
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcp1a decapping mRNA 1A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:6,542,415...6,583,856
Ensembl chr16:6,542,216...6,587,619
JBrowse link
G Dcp1b decapping mRNA 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:151,249,654...151,287,018
Ensembl chr 4:151,250,041...151,285,702
JBrowse link
G Edc3 enhancer of mRNA decapping 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:62,482,126...62,527,665
Ensembl chr 8:62,482,140...62,526,202
JBrowse link
G Edc4 enhancer of mRNA decapping 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:37,852,659...37,864,651
Ensembl chr19:37,852,659...37,866,355
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex, subunit 6 ISO
IEA
ISS
(PMID:20065043)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20065043 GO_REF:0000024, GO_REF:0000107 NCBI chr10:35,144,291...35,195,126
Ensembl chr10:35,146,337...35,187,416
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 ISO
IBA
(PMID:20065043), (PMID:21336257)
PMID:21873635
RGD PMID:20065043, PMID:21336257, PMID:21873635 RGD:13792537 NCBI chr16:54,899,452...54,918,616
Ensembl chr16:54,899,452...54,918,613
JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 ISO
IBA
(PMID:20065043)
PMID:21873635
RGD PMID:20065043, PMID:21873635 RGD:13792537 NCBI chr10:43,538,150...43,551,271
Ensembl chr10:43,538,160...43,551,271
JBrowse link
G Exosc2 exosome component 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:10,151,734...10,161,997
Ensembl chr 3:10,151,284...10,161,989
JBrowse link
G Exosc3 exosome component 3 ISO
IBA
(PMID:11782436)
PMID:21873635
RGD PMID:11782436, PMID:21873635 RGD:13792537 NCBI chr 5:60,866,498...60,871,734
Ensembl chr 5:60,868,502...60,871,705
JBrowse link
G Exosc5 exosome component 5 ISO (PMID:11782436) RGD PMID:11782436 NCBI chr 1:82,452,104...82,461,607
Ensembl chr 1:82,452,469...82,461,606
JBrowse link
G Exosc7 exosome component 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:132,204,628...132,229,968
Ensembl chr 8:132,204,604...132,229,969
JBrowse link
G Exosc8 exosome component 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:143,925,643...143,932,240
Ensembl chr 2:143,925,546...143,931,940
JBrowse link
G Exosc9 exosome component 9 ISO
IBA
(PMID:11782436)
PMID:21873635
RGD PMID:11782436, PMID:21873635 RGD:13792537 NCBI chr 2:123,264,679...123,275,623
Ensembl chr 2:123,264,694...123,294,880
JBrowse link
generation of catalytic spliceosome for first transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prpf19 pre-mRNA processing factor 19 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:226,947,065...226,958,147
Ensembl chr 1:226,947,105...226,958,144
JBrowse link
G Xab2 XPA binding protein 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:2,158,391...2,170,397
Ensembl chr12:2,158,389...2,170,504
JBrowse link
generation of catalytic spliceosome for second transesterification step term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isy1 ISY1 splicing factor homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:119,721,659...119,742,349
Ensembl chr 4:119,721,660...119,742,349
JBrowse link
G Prpf18 pre-mRNA processing factor 18 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:77,601,914...77,632,507
Ensembl chr17:77,601,877...77,663,980
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO (PMID:16086026) RGD PMID:16086026 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Dcp2 decapping mRNA 2 ISO (PMID:18172165) RGD PMID:18172165 NCBI chr18:35,489,274...35,671,676
Ensembl chr18:35,489,274...35,672,291
JBrowse link
G Eri1 exoribonuclease 1 NOT ISO
ISS
(PMID:18172165)
GO_REF:0000024
RGD
UniProt
PMID:18172165 GO_REF:0000024 NCBI chr16:60,307,148...60,327,237
Ensembl chr16:60,307,148...60,327,236
JBrowse link
G Exosc10 exosome component 10 ISO
IBA
(PMID:18172165)
PMID:21873635
RGD PMID:18172165, PMID:21873635 RGD:13792537 NCBI chr 5:165,374,964...165,398,195
Ensembl chr 5:165,374,951...165,398,217
JBrowse link
G Exosc4 exosome component 4 ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 7:117,390,302...117,393,044
Ensembl chr 7:117,390,285...117,393,719
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated ISO (PMID:18172165) RGD PMID:18172165 NCBI chr16:71,046,475...71,057,883
Ensembl chr16:71,046,475...71,057,883
JBrowse link
G Mtpap mitochondrial poly(A) polymerase ISO (PMID:18172165) RGD PMID:18172165 NCBI chr17:56,046,507...56,068,185
Ensembl chr17:56,046,509...56,068,125
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISO
ISS
(PMID:18172165)
GO_REF:0000024
RGD
UniProt
PMID:18172165 GO_REF:0000024 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
JBrowse link
G Tent4a terminal nucleotidyltransferase 4A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:36,400,056...36,433,238
Ensembl chr 1:36,400,443...36,433,238
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO
IBA
(PMID:18172165)
PMID:21873635
RGD PMID:18172165, PMID:21873635 RGD:13792537 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812
JBrowse link
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific NOT ISO
ISS
(PMID:18172165)
GO_REF:0000024
RGD
UniProt
PMID:18172165 GO_REF:0000024 NCBI chr 1:225,151,462...225,162,445
Ensembl chr 1:225,151,404...225,162,595
JBrowse link
G Tut4 terminal uridylyl transferase 4 NOT ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 5:128,063,880...128,168,726
Ensembl chr 5:128,083,118...128,168,207
JBrowse link
G Tut7 terminal uridylyl transferase 7 NOT ISO (PMID:18172165) RGD PMID:18172165 NCBI chr17:5,225,854...5,279,674
Ensembl chr17:5,225,835...5,271,794
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase ISO (PMID:16086026) RGD PMID:16086026 NCBI chr16:20,824,888...20,845,632
Ensembl chr16:20,824,864...20,845,243
JBrowse link
G Xrn1 5'-3' exoribonuclease 1 ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 8:103,774,125...103,883,563
Ensembl chr 8:103,774,358...103,878,899
JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde12 phosphodiesterase 12 IEA
ISO
GO_REF:0000107
(PMID:21245038), (PMID:21666256)
Ensembl
RGD
PMID:21245038, PMID:21666256 GO_REF:0000107 NCBI chr16:2,357,028...2,367,069
Ensembl chr16:2,357,028...2,367,253
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 ISO
IBA
(PMID:20691904)
PMID:21873635
(MGI:MGI:4881376|PMID:20691904)
RGD PMID:20691904, PMID:21873635 MGI:MGI:4881376, RGD:13792537 NCBI chr14:113,530,470...113,561,645
Ensembl chr14:113,530,470...113,561,645
JBrowse link
G Supv3l1 Suv3 like RNA helicase IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19864255)
Ensembl
UniProt
RGD
PMID:19864255 GO_REF:0000024, GO_REF:0000107 NCBI chr20:32,057,530...32,080,170
Ensembl chr20:32,057,454...32,080,088
JBrowse link
mitochondrial mRNA polyadenylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 ISO (PMID:18083837) RGD PMID:18083837 NCBI chr14:113,530,470...113,561,645
Ensembl chr14:113,530,470...113,561,645
JBrowse link
mitochondrial mRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbrg4 transforming growth factor beta regulator 4 ISO
ISS
(PMID:28335001)
GO_REF:0000024
RGD
UniProt
PMID:28335001 GO_REF:0000024 NCBI chr14:86,876,800...86,885,603
Ensembl chr14:86,877,627...86,885,584
JBrowse link
mRNA 3'-end processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rprd1a regulation of nuclear pre-mRNA domain containing 1A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:16,450,160...16,497,913
Ensembl chr18:16,453,369...16,497,886
JBrowse link
G Rprd1b regulation of nuclear pre-mRNA domain containing 1B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:154,507,029...154,553,312
Ensembl chr 3:154,507,035...154,553,312
JBrowse link
G Rprd2 regulation of nuclear pre-mRNA domain containing 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:197,882,666...197,937,844
Ensembl chr 2:197,886,160...197,935,567
JBrowse link
G Zc3h3 zinc finger CCCH type containing 3 ISO (MGI:MGI:3619747|PMID:16115198) RGD PMID:16115198 MGI:MGI:3619747 NCBI chr 7:116,787,762...116,872,536
Ensembl chr 7:116,787,766...116,872,511
JBrowse link
mRNA 3'-end processing by stem-loop binding and cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf2 cleavage and polyadenylation specific factor 2 ISO
IBA
(PMID:18688255)
PMID:21873635
RGD PMID:18688255, PMID:21873635 RGD:13792537 NCBI chr 6:125,870,372...125,898,039
Ensembl chr 6:125,870,372...125,898,874
JBrowse link
G Cpsf3 cleavage and polyadenylation specific factor 3 ISO
IBA
(PMID:18688255)
PMID:21873635
(MGI:MGI:4418605|PMID:18955505)
RGD PMID:18688255, PMID:18955505, PMID:21873635 MGI:MGI:4418605, RGD:13792537 NCBI chr 6:43,363,792...43,391,712
Ensembl chr 6:43,363,792...43,391,712
JBrowse link
G LOC100363294 stem-loop binding protein-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:27,550,426...27,557,699
Ensembl chr18:27,554,062...27,557,699
JBrowse link
G Lsm11 LSM11, U7 small nuclear RNA associated ISO
IBA
(MGI:MGI:2676509|PMID:12975319)
PMID:21873635
RGD PMID:12975319, PMID:21873635 MGI:MGI:2676509, RGD:13792537 NCBI chr10:31,023,561...31,041,700
Ensembl chr10:31,028,697...31,041,626
JBrowse link
G Slbp stem-loop binding protein ISO
IBA
(MGI:MGI:4353869|PMID:19470752)
PMID:21873635
RGD PMID:19470752, PMID:21873635 MGI:MGI:4353869, RGD:13792537 NCBI chr14:82,356,916...82,366,368
Ensembl chr14:82,356,916...82,366,368
JBrowse link
G Zfp473 zinc finger protein 473 ISO (PMID:16714279) RGD PMID:16714279 NCBI chr 1:100,736,319...100,755,498
Ensembl chr 1:100,736,243...100,746,021
JBrowse link
mRNA 3'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isy1 ISY1 splicing factor homolog IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:119,721,659...119,742,349
Ensembl chr 4:119,721,660...119,742,349
JBrowse link
G Slu7 SLU7 homolog, splicing factor ISO
ISS
(PMID:15728250)
PMID:15181151
RGD PMID:15728250, PMID:15181151 RGD:1304333 NCBI chr10:29,029,556...29,044,919
Ensembl chr10:29,029,590...29,044,583
JBrowse link
mRNA 5'-splice site recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prpf39 pre-mRNA processing factor 39 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:86,785,793...86,810,806
Ensembl chr 6:86,785,771...86,810,316
JBrowse link
G Psip1 PC4 and SFRS1 interacting protein 1 ISO
IEA
ISS
(PMID:9885563)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9885563 GO_REF:0000024, GO_REF:0000107 NCBI chr 5:101,555,691...101,588,659
Ensembl chr 5:101,555,694...101,588,598
JBrowse link
G Sfswap splicing factor SWAP ISO
IBA
IEA
(MGI:MGI:84585|PMID:8940107)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:8940107, PMID:21873635 GO_REF:0000107, MGI:MGI:84585, RGD:13792537 NCBI chr12:30,740,563...30,811,015
Ensembl chr12:30,740,520...30,811,054
JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:7,409,401...7,427,581
Ensembl chr20:7,409,401...7,427,581
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO (PMID:8940107), (PMID:9885563) RGD PMID:8940107, PMID:9885563 NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197
JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 ISO (PMID:11684676) RGD PMID:11684676 NCBI chr 5:48,456,777...48,484,017
Ensembl chr 5:48,456,757...48,485,912
JBrowse link
mRNA alternative polyadenylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpsf6 cleavage and polyadenylation specific factor 6 ISO (PMID:20695905), (PMID:23187700), (PMID:29276085) RGD PMID:20695905, PMID:23187700, PMID:29276085 NCBI chr 7:60,385,688...60,417,661
Ensembl chr 7:60,385,688...60,416,925
JBrowse link
G Cpsf7 cleavage and polyadenylation specific factor 7 ISS
ISO
GO_REF:0000024
(PMID:29276085)
UniProt
RGD
PMID:29276085 GO_REF:0000024 NCBI chr 1:226,572,399...226,596,185
Ensembl chr 1:226,573,105...226,596,131
JBrowse link
G Nudt21 nudix hydrolase 21 ISS
ISO
GO_REF:0000024
(PMID:17098938), (PMID:20695905), (PMID:23187700), (PMID:29276085)
UniProt
RGD
PMID:17098938, PMID:20695905, PMID:23187700, PMID:29276085 GO_REF:0000024 NCBI chr19:11,451,366...11,470,637
Ensembl chr19:11,450,760...11,467,644
JBrowse link
G Virma vir like m6A methyltransferase associated ISO (PMID:29507755) RGD PMID:29507755 NCBI chr 5:25,042,743...25,121,403
Ensembl chr 5:25,042,710...25,120,264
JBrowse link
G Ythdc1 YTH domain containing 1 ISO (MGI:MGI:6161521|PMID:29799838) RGD PMID:29799838 MGI:MGI:6161521 NCBI chr14:22,971,834...23,002,326
Ensembl chr14:22,971,836...23,002,011
JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC118772.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:70,484,134...70,506,963 JBrowse link
G Ago3 argonaute RISC catalytic component 3 ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:144,355,792...144,436,509
Ensembl chr 5:144,364,269...144,436,509
JBrowse link
G Ago4 argonaute RISC component 4 ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:144,501,875...144,557,165
Ensembl chr 5:144,504,938...144,556,889
JBrowse link
G Cnot10 CCR4-NOT transcription complex, subunit 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:122,634,681...122,696,466
Ensembl chr 8:122,634,685...122,679,720
JBrowse link
G Cnot9 CCR4-NOT transcription complex subunit 9 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:81,783,349...81,808,815
Ensembl chr 9:81,783,349...81,808,805
JBrowse link
G Dcp2 decapping mRNA 2 ISO (MGI:MGI:4849882|PMID:21070968)
(PMID:21070968), (PMID:28002401)
RGD PMID:21070968, PMID:28002401 MGI:MGI:4849882 NCBI chr18:35,489,274...35,671,676
Ensembl chr18:35,489,274...35,672,291
JBrowse link
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:93,767,837...94,161,106
Ensembl chr 9:93,660,680...94,160,760
JBrowse link
G Dxo decapping exoribonuclease ISS
ISO
GO_REF:0000024
(MGI:MGI:5488528|PMID:23523372), (MGI:MGI:6368104|PMID:28283058)
(PMID:29601584)
UniProt
RGD
PMID:23523372, PMID:28283058, PMID:29601584 GO_REF:0000024, MGI:MGI:5488528, MGI:MGI:6368104 NCBI chr20:4,517,307...4,519,391
Ensembl chr20:4,517,307...4,519,389
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A ISO
ISS
(PMID:10205060)
GO_REF:0000024
RGD
UniProt
PMID:10205060 GO_REF:0000024 NCBI chr20:4,875,834...4,881,751
Ensembl chr20:4,877,324...4,879,779
JBrowse link
G Hspa1b heat shock protein family A (Hsp70) member 1B ISO
ISS
(PMID:10205060)
GO_REF:0000024
RGD
UniProt
PMID:10205060 GO_REF:0000024 NCBI chr20:4,877,638...4,880,112
Ensembl chr20:2,699,712...2,701,815
JBrowse link
G Khsrp KH-type splicing regulatory protein ISO
IEA
(MGI:MGI:5439239|PMID:22844247)
GO_REF:0000107
RGD
Ensembl
PMID:22844247 GO_REF:0000107, MGI:MGI:5439239 NCBI chr 9:10,013,795...10,023,670
Ensembl chr 9:10,013,854...10,022,924
JBrowse link
G LOC108348108 heat shock 70 kDa protein 1A ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr20:2,699,707...2,701,856
Ensembl chr20:4,877,324...4,879,779
Ensembl chr20:4,877,324...4,879,779
JBrowse link
G LOC688828 similar to Nucleoside diphosphate-linked moiety X motif 16 (Nudix motif 16) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:113,687,983...113,689,657
Ensembl chr 8:113,687,975...113,689,681
JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:12515382) RGD PMID:12515382 NCBI chr20:4,966,817...4,970,567
Ensembl chr20:4,966,817...4,970,568
JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:12515382) RGD PMID:12515382 NCBI chr 4:87,016,003...87,019,219
Ensembl chr 4:87,016,003...87,019,219
Ensembl chr 6:87,016,003...87,019,219
JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:12515382) RGD PMID:12515382 NCBI chr19:32,770,640...32,785,215
Ensembl chr19:32,770,655...32,785,215
JBrowse link
G Mettl14 methyltransferase like 14 ISO (MGI:MGI:5927282|PMID:28965759) RGD PMID:28965759 MGI:MGI:5927282 NCBI chr 2:227,566,811...227,583,047
Ensembl chr 2:227,566,815...227,582,895
JBrowse link
G Mettl16 methyltransferase like 16 ISO
IEA
(MGI:MGI:6114846|PMID:29262316)
GO_REF:0000107
RGD
Ensembl
PMID:29262316 GO_REF:0000107, MGI:MGI:6114846 NCBI chr10:61,626,595...61,682,947
Ensembl chr10:61,626,597...61,672,136
JBrowse link
G Mettl3 methyltransferase-like 3 ISO (MGI:MGI:5927282|PMID:28965759), (MGI:MGI:6094929|PMID:28792938), (MGI:MGI:6095345|PMID:28637692) RGD PMID:28637692, PMID:28792938, PMID:28965759 MGI:MGI:5927282, MGI:MGI:6094929, MGI:MGI:6095345 NCBI chr15:28,710,299...28,721,491
Ensembl chr15:28,710,300...28,721,127
JBrowse link
G Mirlet7b microRNA let-7b ISO MGI:MGI:2676795|MGI:MGI:3619050 (MGI:MGI:5439239|PMID:22844247) RGD PMID:22844247 MGI:MGI:5439239 NCBI chr 7:126,590,627...126,590,711
Ensembl chr 7:126,590,627...126,590,711
JBrowse link
G Mirlet7c1 microRNA let-7c-1 ISO MGI:MGI:2676794|MGI:MGI:3619050 (MGI:MGI:5439239|PMID:22844247) RGD PMID:22844247 MGI:MGI:5439239 NCBI chr11:16,052,873...16,052,966
Ensembl chr11:16,052,868...16,052,975
JBrowse link
G Mirlet7c2 microRNA let-7c-2 ISO MGI:MGI:2676794|MGI:MGI:2676795 (MGI:MGI:5439239|PMID:22844247) RGD PMID:22844247 MGI:MGI:5439239 NCBI chr 7:126,590,212...126,590,306
Ensembl chr 7:126,590,212...126,590,306
JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 ISO (MGI:MGI:4431145|PMID:20133598) RGD PMID:20133598 MGI:MGI:4431145 NCBI chr 1:79,894,450...79,895,910
Ensembl chr 1:79,894,450...79,895,910
JBrowse link
G Nudt12 nudix hydrolase 12 ISO (MGI:MGI:6368680|PMID:31101919) RGD PMID:31101919 MGI:MGI:6368680 NCBI chr 9:105,680,603...105,693,374
Ensembl chr 9:105,680,670...105,693,357
JBrowse link
G Nudt16 nudix hydrolase 16 ISO
IBA
(MGI:MGI:4849882|PMID:21070968)
PMID:21873635
(PMID:21070968), (PMID:21337011)
RGD PMID:21070968, PMID:21337011, PMID:21873635 MGI:MGI:4849882, RGD:13792537 NCBI chr 8:113,673,069...113,675,124
Ensembl chr 8:113,672,758...113,675,128
JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 NOT IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:10,829,866...10,831,782
Ensembl chr10:10,829,867...10,831,782
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 ISO (PMID:12721301), (PMID:16055741) RGD PMID:12721301, PMID:16055741 NCBI chr14:113,530,470...113,561,645
Ensembl chr14:113,530,470...113,561,645
JBrowse link
G Rida reactive intermediate imine deaminase A homolog ISS
ISO
GO_REF:0000024
(PMID:30930054)
UniProt
RGD
PMID:30930054 GO_REF:0000024 NCBI chr 7:73,256,506...73,270,308
Ensembl chr 7:73,256,508...73,270,308
JBrowse link
G Slfn14 schlafen family member 14 ISO (MGI:MGI:5705207|PMID:25996083) RGD PMID:25996083 MGI:MGI:5705207 NCBI chr10:70,493,340...70,504,810 JBrowse link
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 ISO (PMID:27558897), (PMID:30559377), (PMID:30930054)
(MGI:MGI:6316439|PMID:29855337), (MGI:MGI:6316688|PMID:30065315), (MGI:MGI:6317061|PMID:30150673)
RGD PMID:27558897, PMID:29855337, PMID:30065315, PMID:30150673, PMID:30559377, PMID:30930054 MGI:MGI:6316439, MGI:MGI:6316688, MGI:MGI:6317061 NCBI chr 5:150,364,490...150,390,173
Ensembl chr 5:150,365,101...150,390,099
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D ISO
IBA
MGI:MGI:5588370 (MGI:MGI:5567042|PMID:24415781)
PMID:21873635
RGD PMID:24415781, PMID:21873635 MGI:MGI:5567042, RGD:13792537 NCBI chr 1:1,937,620...1,972,919
Ensembl chr 1:1,938,419...1,972,918
JBrowse link
G Zfp36 zinc finger protein 36 ISS
ISO
GO_REF:0000024
(PMID:10330172), (PMID:10751406), (PMID:11782475), (PMID:20221403)
UniProt
RGD
PMID:10330172, PMID:10751406, PMID:11782475, PMID:20221403 GO_REF:0000024 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 IDA PMID:10751406 MGI PMID:10751406 RGD:1580602 NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 ISO (MGI:MGI:5320815|PMID:22367205) RGD PMID:22367205 MGI:MGI:5320815 NCBI chr 6:7,417,416...7,423,447
Ensembl chr 6:7,417,425...7,421,456
JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 ISO (MGI:MGI:49288|PMID:1370712) RGD PMID:1370712 MGI:MGI:49288 NCBI chr 7:97,559,653...97,707,872
Ensembl chr 7:97,559,841...97,695,739
JBrowse link
mRNA cis splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07008904.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:77,783,851...77,784,522 JBrowse link
G AABR07055789.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 7:10,064,414...10,068,532 JBrowse link
G Cactin cactin, spliceosome C complex subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,258,526...11,266,509
Ensembl chr 7:11,261,201...11,266,630
JBrowse link
G Cwc15 CWC15 spliceosome-associated protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:12,994,131...13,004,958
Ensembl chr 8:12,994,155...13,004,957
JBrowse link
G Dcps decapping enzyme, scavenger IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:18426921)
Ensembl
UniProt
RGD
PMID:18426921 GO_REF:0000024, GO_REF:0000107 NCBI chr 8:36,321,992...36,374,665
Ensembl chr 8:36,321,993...36,374,673
JBrowse link
G LOC310177 similar to RIKEN cDNA 0610040D20 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:77,783,788...77,784,626 JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:61,734,118...61,767,098
Ensembl chr 5:61,734,118...61,766,481
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 ISS
ISO
GO_REF:0000024
(PMID:18426921)
UniProt
RGD
PMID:18426921 GO_REF:0000024 NCBI chr11:72,071,838...72,103,087
Ensembl chr11:72,921,282...72,929,003
JBrowse link
G Prpf40a pre-mRNA processing factor 40 homolog A IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:38,680,583...38,741,570
Ensembl chr 3:38,682,146...38,741,113
JBrowse link
G Prpf40b pre-mRNA processing factor 40 homolog B IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:140,958,952...140,981,588
Ensembl chr 7:140,967,282...140,981,583
JBrowse link
G Rbm19 RNA binding motif protein 19 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,907,978...41,993,969
Ensembl chr12:41,907,740...41,993,957
JBrowse link
G Rbm22 RNA binding motif protein 22 ISO
ISS
(PMID:22246180)
GO_REF:0000024
RGD
UniProt
PMID:22246180 GO_REF:0000024 NCBI chr18:55,828,158...55,839,421
Ensembl chr18:55,828,158...55,838,966
JBrowse link
G Rbm4b RNA binding motif protein 4B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,009,397...220,019,488
Ensembl chr 1:220,009,397...220,019,486
JBrowse link
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:220,762,496...220,771,158
Ensembl chr 1:220,762,349...220,771,181
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:154,205,358...154,219,550
Ensembl chr 5:154,205,402...154,213,801
JBrowse link
G Srsf12 serine and arginine rich splicing factor 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:48,456,777...48,484,017
Ensembl chr 5:48,456,757...48,485,912
JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:105,792,779...105,795,986
Ensembl chr10:105,792,779...105,795,958
JBrowse link
G Srsf3 serine and arginine rich splicing factor 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:6,288,285...6,298,218
Ensembl chr20:6,288,267...6,298,213
JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:150,032,999...150,060,769
Ensembl chr 5:150,032,999...150,060,765
JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:104,611,026...104,640,033
Ensembl chr 6:104,611,026...104,615,302
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:159,305,345...159,310,668
Ensembl chr 3:159,305,345...159,310,668
JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:2,879,312...2,886,505
Ensembl chr 6:2,880,518...2,886,465
JBrowse link
G Srsf8 serine and arginine rich splicing factor 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:49,529,525...49,530,166
NCBI chr  X:49,644,973...49,705,870
Ensembl chr  X:49,529,318...49,530,166
JBrowse link
G Srsf9 serine and arginine rich splicing factor 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:47,039,714...47,046,022
Ensembl chr12:47,039,716...47,046,022
JBrowse link
G Wbp11 WW domain binding protein 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,772,166...170,785,613
Ensembl chr 4:170,772,163...170,810,080
Ensembl chr 4:170,772,163...170,810,080
JBrowse link
G Wbp11l1 WW domain-binding protein 11-like 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:170,154,257...170,167,724
Ensembl chr 4:170,154,227...170,186,942
JBrowse link
G Wbp4 WW domain binding protein 4 ISO
ISS
(PMID:19592703)
GO_REF:0000024
RGD
UniProt
PMID:19592703 GO_REF:0000024 NCBI chr15:61,745,989...61,772,516
Ensembl chr15:61,745,989...61,772,516
JBrowse link
mRNA cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ern1 endoplasmic reticulum to nucleus signaling 1 ISO (MGI:MGI:6114871|PMID:25164867) RGD PMID:25164867 MGI:MGI:6114871 NCBI chr10:94,588,555...94,682,072
Ensembl chr10:94,588,555...94,681,914
JBrowse link
G LOC103690054 DNA-directed RNA polymerase II subunit RPB9 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:91,041,173...91,042,258
Ensembl chr 1:91,041,214...91,042,230
Ensembl chr 1:91,041,214...91,042,230
JBrowse link
G Polr1h RNA polymerase I subunit H IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:2,088,518...2,092,436
Ensembl chr20:2,088,533...2,092,436
JBrowse link
G Polr2i RNA polymerase II subunit I IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:88,686,812...88,688,249
Ensembl chr 1:88,686,731...88,688,258
JBrowse link
mRNA cleavage involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 NOT ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:144,444,390...144,479,430
Ensembl chr 5:144,448,792...144,479,306
JBrowse link
G Ago2 argonaute RISC catalytic component 2 ISO
IEA
ISS
(MGI:MGI:5616320|PMID:16357216)
(PMID:15260970), (PMID:17524464), (PMID:18771919)
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:15260970, PMID:16357216, PMID:17524464, PMID:18771919 GO_REF:0000024, GO_REF:0000104, MGI:MGI:5616320 NCBI chr 7:114,339,607...114,377,277
Ensembl chr 7:114,339,434...114,380,613
JBrowse link
G Ago3 argonaute RISC catalytic component 3 NOT ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:144,355,792...144,436,509
Ensembl chr 5:144,364,269...144,436,509
JBrowse link
G Ago4 argonaute RISC component 4 NOT ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:144,501,875...144,557,165
Ensembl chr 5:144,504,938...144,556,889
JBrowse link
G Mir196a microRNA 196a ISO (MGI:MGI:3042528|PMID:15105502), (MGI:MGI:3510301|PMID:15361871) RGD PMID:15105502, PMID:15361871 MGI:MGI:3042528, MGI:MGI:3510301 NCBI chr 7:144,584,235...144,584,344
Ensembl chr 7:144,584,235...144,584,344
JBrowse link
G Mir196b microRNA 196b ISO (MGI:MGI:3042528|PMID:15105502) RGD PMID:15105502 MGI:MGI:3042528 NCBI chr 4:82,199,056...82,199,140
Ensembl chr 4:82,199,056...82,199,140
JBrowse link
G Mir196c microRNA 196c ISO (MGI:MGI:3042528|PMID:15105502), (MGI:MGI:3510301|PMID:15361871) RGD PMID:15105502, PMID:15361871 MGI:MGI:3042528, MGI:MGI:3510301 NCBI chr10:84,113,578...84,113,657
Ensembl chr10:84,113,578...84,113,657
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase ISO (PMID:16289642) RGD PMID:16289642 NCBI chr 2:207,277,088...207,301,245
Ensembl chr 2:207,278,161...207,300,854
JBrowse link
mRNA cleavage involved in gene silencing by siRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 NOT ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:144,444,390...144,479,430
Ensembl chr 5:144,448,792...144,479,306
JBrowse link
G Ago2 argonaute RISC catalytic component 2 IEA
ISO
GO_REF:0000107
(PMID:15260970), (PMID:22795694)
Ensembl
RGD
PMID:15260970, PMID:22795694 GO_REF:0000107 NCBI chr 7:114,339,607...114,377,277
Ensembl chr 7:114,339,434...114,380,613
JBrowse link
G Ago3 argonaute RISC catalytic component 3 NOT ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:144,355,792...144,436,509
Ensembl chr 5:144,364,269...144,436,509
JBrowse link
G Ago4 argonaute RISC component 4 NOT ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:144,501,875...144,557,165
Ensembl chr 5:144,504,938...144,556,889
JBrowse link
mRNA cleavage involved in mRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ern1 endoplasmic reticulum to nucleus signaling 1 ISO (PMID:21317875) RGD PMID:21317875 NCBI chr10:94,588,555...94,682,072
Ensembl chr10:94,588,555...94,681,914
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP, Elav-like family member 1 IDA PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr 3:79,768,900...79,844,548
Ensembl chr 3:79,823,945...79,842,082
JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like ISO (MGI:MGI:3828348|PMID:17452450) RGD PMID:17452450 MGI:MGI:3828348 NCBI chr14:15,059,101...15,148,255
Ensembl chr14:15,059,387...15,146,586
JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase ISS
ISO
IEA
GO_REF:0000024
(PMID:28002401), (PMID:30197295)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28002401, PMID:30197295 GO_REF:0000024, GO_REF:0000107 NCBI chr19:16,774,549...17,115,098
Ensembl chr19:16,772,744...17,115,113
JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 ISO (PMID:27157137) RGD PMID:27157137 NCBI chr 9:94,425,191...94,550,431
Ensembl chr 9:94,425,252...94,550,431
JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R IMP RGD PMID:15798208 RGD:9854643 NCBI chr 5:154,668,194...154,699,967
Ensembl chr 5:154,668,179...154,699,966
JBrowse link
G Mettl14 methyltransferase like 14 ISO (MGI:MGI:5559905|PMID:24394384), (MGI:MGI:5927282|PMID:28965759) RGD PMID:24394384, PMID:28965759 MGI:MGI:5559905, MGI:MGI:5927282 NCBI chr 2:227,566,811...227,583,047
Ensembl chr 2:227,566,815...227,582,895
JBrowse link
G Mettl16 methyltransferase like 16 ISO
IEA
(MGI:MGI:6114846|PMID:29262316)
GO_REF:0000107
RGD
Ensembl
PMID:29262316 GO_REF:0000107, MGI:MGI:6114846 NCBI chr10:61,626,595...61,682,947
Ensembl chr10:61,626,597...61,672,136
JBrowse link
G Mettl3 methyltransferase-like 3 ISO (MGI:MGI:5559905|PMID:24394384), (MGI:MGI:5621227|PMID:25569111), (MGI:MGI:5621254|PMID:25456834), (MGI:MGI:5927282|PMID:28965759), (MGI:MGI:6094929|PMID:28792938), (MGI:MGI:6095345|PMID:28637692) RGD PMID:24394384, PMID:25456834, PMID:25569111, PMID:28637692, PMID:28792938, PMID:28965759 MGI:MGI:5559905, MGI:MGI:5621227, MGI:MGI:5621254, MGI:MGI:5927282, MGI:MGI:6094929, MGI:MGI:6095345 NCBI chr15:28,710,299...28,721,491
Ensembl chr15:28,710,300...28,721,127
JBrowse link
G Pum1 pumilio RNA-binding family member 1 ISO (MGI:MGI:5640888|PMID:25768905) RGD PMID:25768905 MGI:MGI:5640888 NCBI chr 5:148,781,239...148,911,776
Ensembl chr 5:148,781,222...148,911,803
JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:29104163) RGD PMID:29104163 NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876
JBrowse link
G Rida reactive intermediate imine deaminase A homolog ISS
ISO
GO_REF:0000024
(PMID:30930054)
UniProt
RGD
PMID:30930054 GO_REF:0000024 NCBI chr 7:73,256,506...73,270,308
Ensembl chr 7:73,256,508...73,270,308
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 IEA
ISO
GO_REF:0000107
(MGI:MGI:6271078|PMID:29353861)
Ensembl
RGD
PMID:29353861 GO_REF:0000107, MGI:MGI:6271078 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 ISO (MGI:MGI:6271078|PMID:29353861) RGD PMID:29353861 MGI:MGI:6271078 NCBI chr 6:42,180,864...42,289,910
Ensembl chr 6:42,180,894...42,289,908
JBrowse link
G Ythdf1 YTH N(6)-methyladenosine RNA binding protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:176,415,911...176,431,423
Ensembl chr 3:176,415,914...176,431,423
JBrowse link
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 ISO
IBA
(PMID:27558897), (PMID:28106072), (PMID:30559377), (PMID:30930054)
PMID:21873635
(MGI:MGI:6316439|PMID:29855337), (MGI:MGI:6316688|PMID:30065315), (MGI:MGI:6317061|PMID:30150673)
RGD PMID:27558897, PMID:28106072, PMID:29855337, PMID:30065315, PMID:30150673, PMID:30559377, PMID:30930054, PMID:21873635 MGI:MGI:6316439, MGI:MGI:6316688, MGI:MGI:6317061, RGD:13792537 NCBI chr 5:150,364,490...150,390,173
Ensembl chr 5:150,365,101...150,390,099
JBrowse link
G Ythdf3 YTH N(6)-methyladenosine RNA binding protein 3 ISO
IBA
(PMID:28106072)
PMID:21873635
RGD PMID:28106072, PMID:21873635 RGD:13792537 NCBI chr 2:100,677,388...100,711,365
Ensembl chr 2:100,677,411...100,710,417
JBrowse link
mRNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbll1 Cbl proto-oncogene like 1 ISO (PMID:29507755) RGD PMID:29507755 NCBI chr 6:50,772,718...50,786,861
Ensembl chr 6:50,772,829...50,786,967
JBrowse link
G Cmtr1 cap methyltransferase 1 ISO
ISS
(PMID:20713356)
GO_REF:0000024
RGD
UniProt
PMID:20713356 GO_REF:0000024 NCBI chr20:8,324,968...8,385,174
Ensembl chr20:8,312,792...8,368,764
JBrowse link
G LOC103692719 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 6:136,244,466...136,250,496
Ensembl chr 6:136,150,785...136,250,752
JBrowse link
G Mettl14 methyltransferase like 14 ISO
IBA
(PMID:24316715), (PMID:25719671), (PMID:27281194), (PMID:27373337), (PMID:27627798)
PMID:21873635
(MGI:MGI:5559905|PMID:24394384), (MGI:MGI:5927282|PMID:28965759)
RGD PMID:24316715, PMID:24394384, PMID:25719671, PMID:27281194, PMID:27373337, PMID:27627798, PMID:28965759, PMID:21873635 MGI:MGI:5559905, MGI:MGI:5927282, RGD:13792537 NCBI chr 2:227,566,811...227,583,047
Ensembl chr 2:227,566,815...227,582,895
JBrowse link
G Mettl16 methyltransferase like 16 ISO
IEA
(PMID:30197297), (PMID:30197299)
GO_REF:0000107
(MGI:MGI:6199095|PMID:30197299)
RGD
Ensembl
PMID:30197297, PMID:30197299 GO_REF:0000107, MGI:MGI:6199095 NCBI chr10:61,626,595...61,682,947
Ensembl chr10:61,626,597...61,672,136
JBrowse link
G Mettl3 methyltransferase-like 3 ISO (PMID:22575960), (PMID:24284625), (PMID:24316715), (PMID:25719671), (PMID:27281194), (PMID:27373337), (PMID:27627798), (PMID:28297716)
(MGI:MGI:5527005|PMID:24209618), (MGI:MGI:5621227|PMID:25569111), (MGI:MGI:5621254|PMID:25456834), (MGI:MGI:5927282|PMID:28965759), (MGI:MGI:6094929|PMID:28792938)
RGD PMID:22575960, PMID:24209618, PMID:24284625, PMID:24316715, PMID:25456834, PMID:25569111, PMID:25719671, PMID:27281194, PMID:27373337, PMID:27627798, PMID:28297716, PMID:28792938, PMID:28965759 MGI:MGI:5527005, MGI:MGI:5621227, MGI:MGI:5621254, MGI:MGI:5927282, MGI:MGI:6094929 NCBI chr15:28,710,299...28,721,491
Ensembl chr15:28,710,300...28,721,127
JBrowse link
G Mettl8 methyltransferase like 8 ISO MGI:MGI:5903742 (MGI:MGI:5903638|PMID:28655767)
(PMID:28655767)
RGD PMID:28655767 MGI:MGI:5903638 NCBI chr 3:57,257,394...57,642,096 JBrowse link
G Nsun2 NOP2/Sun RNA methyltransferase 2 ISO (PMID:22395603), (PMID:28418038), (PMID:31358969)
(MGI:MGI:6368099|PMID:23871666)
RGD PMID:22395603, PMID:23871666, PMID:28418038, PMID:31358969 MGI:MGI:6368099 NCBI chr 1:36,295,650...36,319,906
Ensembl chr 1:36,295,650...36,319,966
JBrowse link
G Pcif1 phosphorylated CTD interacting factor 1 ISO (PMID:30467178), (PMID:30487554), (PMID:31279658), (PMID:31279659)
(MGI:MGI:6368443|PMID:30487554)
RGD PMID:30467178, PMID:30487554, PMID:31279658, PMID:31279659 MGI:MGI:6368443 NCBI chr 3:161,343,883...161,356,815
Ensembl chr 3:161,343,883...161,356,815
JBrowse link
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit ISO
ISS
(PMID:29072297)
GO_REF:0000024
RGD
UniProt
PMID:29072297 GO_REF:0000024 NCBI chr11:47,047,342...47,052,420
Ensembl chr11:47,047,342...47,052,418
JBrowse link
G Trmt6 tRNA methyltransferase 6 ISO (PMID:29072297), (PMID:29107537) RGD PMID:29072297, PMID:29107537 NCBI chr 3:125,458,692...125,470,413
Ensembl chr 3:125,458,692...125,470,413
JBrowse link
G Trmt61a tRNA methyltransferase 61A ISS
ISO
GO_REF:0000024
(PMID:29072297), (PMID:29107537)
UniProt
RGD
PMID:29072297, PMID:29107537 GO_REF:0000024 NCBI chr 6:136,150,768...136,156,785
Ensembl chr 6:136,150,785...136,250,752
JBrowse link
G Virma vir like m6A methyltransferase associated ISO (PMID:24981863), (PMID:29507755) RGD PMID:24981863, PMID:29507755 NCBI chr 5:25,042,743...25,121,403
Ensembl chr 5:25,042,710...25,120,264
JBrowse link
G Wtap WT1 associated protein ISO
IBA
(PMID:24316715), (PMID:24407421), (PMID:24981863)
PMID:21873635
RGD PMID:24316715, PMID:24407421, PMID:24981863, PMID:21873635 RGD:13792537 NCBI chr 1:47,942,500...47,967,633
Ensembl chr 1:47,942,500...47,967,631
JBrowse link
G Zc3h13 zinc finger CCCH type containing 13 ISO (PMID:29507755)
(MGI:MGI:6158697|PMID:29547716)
RGD PMID:29507755, PMID:29547716 MGI:MGI:6158697 NCBI chr15:57,340,522...57,405,287
Ensembl chr15:57,340,579...57,405,287
JBrowse link
mRNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor ISO
IEA
MGI:MGI:104663 (MGI:MGI:4943819|PMID:20541607)
GO_REF:0000107
RGD
Ensembl
PMID:20541607 GO_REF:0000107, MGI:MGI:4943819 NCBI chr 1:250,426,027...250,514,245
Ensembl chr 1:250,426,158...250,514,866
JBrowse link
G Adarb1 adenosine deaminase, RNA-specific, B1 IDA RGD PMID:14660658 RGD:1358272 NCBI chr20:11,972,352...12,101,022
Ensembl chr20:11,972,381...12,101,047
JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 IDA
ISO
MGI:MGI:2157186|MGI:MGI:2157378|MGI:MGI:3664540 (MGI:MGI:1340097|PMID:10403781), (MGI:MGI:2157316|PMID:8692961), (MGI:MGI:80219|PMID:8626621), (MGI:MGI:894899|PMID:9240444) RGD PMID:8626621, PMID:8692961, PMID:9240444, PMID:10403781, PMID:8511591 MGI:MGI:1340097, MGI:MGI:2157316, MGI:MGI:80219, MGI:MGI:894899, RGD:634661 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
JBrowse link
G Apobec2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 ISO MGI:MGI:2157186 (MGI:MGI:80219|PMID:8626621) RGD PMID:8626621 MGI:MGI:80219 NCBI chr 9:14,529,218...14,542,731
Ensembl chr 9:14,529,218...14,542,731
JBrowse link
G Dnajb11 DnaJ heat shock protein family (Hsp40) member B11 ISO (MGI:MGI:2154591|PMID:11584023) RGD PMID:11584023 MGI:MGI:2154591 NCBI chr11:81,741,342...81,757,806
Ensembl chr11:81,741,297...81,757,813
JBrowse link
mRNA polyadenylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcyl1 adenosylhomocysteinase-like 1 ISO (MGI:MGI:3848108|PMID:19224921)
(PMID:19224921)
RGD PMID:19224921 MGI:MGI:3848108 NCBI chr 2:210,438,884...210,474,350
Ensembl chr 2:210,438,893...210,473,761
JBrowse link
G Aplp1 amyloid beta precursor like protein 1 ISO (MGI:MGI:3610697|PMID:16314516) RGD PMID:16314516 MGI:MGI:3610697 NCBI chr 1:88,897,525...88,908,750
Ensembl chr 1:88,897,532...88,908,750
JBrowse link
G App amyloid beta precursor protein ISO
ISS
(MGI:MGI:3610697|PMID:16314516)
GO_REF:0000024
RGD
UniProt
PMID:16314516 GO_REF:0000024, MGI:MGI:3610697 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Cdc73 cell division cycle 73 ISO
IEA
ISS
(PMID:21329879)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21329879 GO_REF:0000024, GO_REF:0000107 NCBI chr13:60,403,771...60,496,511
Ensembl chr13:60,403,771...60,496,511
JBrowse link
G Clp1 cleavage factor polyribonucleotide kinase subunit 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:72,125,269...72,137,122
Ensembl chr 3:72,125,273...72,128,973
JBrowse link
G Cpsf1 cleavage and polyadenylation specific factor 1 ISO
IBA
(PMID:7590244)
PMID:21873635
RGD PMID:7590244, PMID:21873635 RGD:13792537 NCBI chr 7:117,661,779...117,672,373
Ensembl chr 7:117,661,661...117,672,373
JBrowse link
G Cpsf2 cleavage and polyadenylation specific factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:125,870,372...125,898,039
Ensembl chr 6:125,870,372...125,898,874
JBrowse link
G Cpsf3 cleavage and polyadenylation specific factor 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:43,363,792...43,391,712
Ensembl chr 6:43,363,792...43,391,712
JBrowse link
G Cstf2 cleavage stimulation factor subunit 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:104,882,726...104,909,746
Ensembl chr  X:104,882,704...104,909,739
JBrowse link
G Fip1l1 factor interacting with PAPOLA and CPSF1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:36,150,381...36,208,395
Ensembl chr14:36,150,399...36,208,373
JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component ISO
ISS
(PMID:21329879)
GO_REF:0000024
RGD
UniProt
PMID:21329879 GO_REF:0000024 NCBI chr 8:82,380,906...82,405,293
Ensembl chr 8:82,380,757...82,405,644
JBrowse link
G Mtpap mitochondrial poly(A) polymerase ISO
IBA
(PMID:21292163)
PMID:21873635
RGD PMID:21292163, PMID:21873635 RGD:13792537 NCBI chr17:56,046,507...56,068,185
Ensembl chr17:56,046,509...56,068,125
JBrowse link
G Nudt21 nudix hydrolase 21 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:11,451,366...11,470,637
Ensembl chr19:11,450,760...11,467,644
JBrowse link
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like ISO MGI:MGI:5437740 (MGI:MGI:5437387|PMID:22621333) RGD PMID:22621333 MGI:MGI:5437387 NCBI chr 3:160,410,733...160,447,073
Ensembl chr 3:160,410,757...160,444,940
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component ISO
ISS
(PMID:21329879)
GO_REF:0000024
RGD
UniProt
PMID:21329879 GO_REF:0000024 NCBI chr 1:85,362,421...85,367,999
Ensembl chr 1:85,362,268...85,368,031
JBrowse link
G Papola poly (A) polymerase alpha ISO
IBA
(PMID:19224921), (PMID:7590244)
PMID:21873635
RGD PMID:7590244, PMID:19224921, PMID:21873635 RGD:13792537 NCBI chr 6:129,609,068...129,662,002
Ensembl chr 6:129,609,074...129,661,531
JBrowse link
G Papolg poly(A) polymerase gamma IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:108,624,359...108,658,371
Ensembl chr14:108,624,359...108,658,371
JBrowse link
G Pcf11 PCF11 cleavage and polyadenylation factor subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:157,463,014...157,494,134
Ensembl chr 1:157,468,626...157,494,008
JBrowse link
G Scaf8 SR-related CTD-associated factor 8 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:44,017,801...44,120,619
Ensembl chr 1:44,019,059...44,120,615
JBrowse link
G Ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase ISO
IBA
ISS
(PMID:20861839)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20861839, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:173,152,964...173,182,720
Ensembl chr 5:173,152,964...173,182,719
JBrowse link
G Sympk symplekin ISO
IBA
(PMID:20861839)
PMID:21873635
RGD PMID:20861839, PMID:21873635 RGD:13792537 NCBI chr 1:79,931,097...79,959,461
Ensembl chr 1:79,931,156...79,959,461
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B ISO (PMID:28383716) RGD PMID:28383716 NCBI chr19:19,771,289...19,834,759
Ensembl chr19:19,771,677...19,832,812
JBrowse link
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:18288197), (PMID:21102410)
UniProt
RGD
PMID:18288197, PMID:21102410, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:225,151,462...225,162,445
Ensembl chr 1:225,151,404...225,162,595
JBrowse link
G Tut4 terminal uridylyl transferase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:128,063,880...128,168,726
Ensembl chr 5:128,083,118...128,168,207
JBrowse link
G Tut7 terminal uridylyl transferase 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:5,225,854...5,279,674
Ensembl chr17:5,225,835...5,271,794
JBrowse link
G Wdr33 WD repeat domain 33 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:24,584,832...24,689,681
Ensembl chr18:24,584,900...24,689,636
JBrowse link
mRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:250,426,027...250,514,245
Ensembl chr 1:250,426,158...250,514,866
JBrowse link
G AABR07031533.1 IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr18:18,003,537...18,079,560 JBrowse link
G AABR07035787.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr12:22,466,601...22,470,972 JBrowse link
G AABR07051190.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:260,653...262,124 JBrowse link
G AABR07065078.1 IEA GO_REF:0000043 UniProt GO_REF:0000043 Ensembl chr 6:107,156,263...107,164,033 JBrowse link
G Adar adenosine deaminase, RNA-specific IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:189,045,551...189,085,448
Ensembl chr 2:189,062,443...189,083,236
JBrowse link
G Adarb1 adenosine deaminase, RNA-specific, B1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:11,972,352...12,101,022
Ensembl chr20:11,972,381...12,101,047
JBrowse link
G Adarb2 adenosine deaminase, RNA-specific, B2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:58,098,979...58,653,137
Ensembl chr17:58,104,559...58,301,260
JBrowse link
G Akap8l A-kinase anchoring protein 8 like ISO (PMID:17594903) RGD PMID:17594903 NCBI chr 7:14,340,168...14,369,835
Ensembl chr 7:14,340,170...14,369,821
JBrowse link
G Alkbh5 alkB homolog 5, RNA demethylase ISO
IBA
ISS
(PMID:23177736)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:23177736, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:46,906,314...46,927,759
Ensembl chr10:46,906,115...46,930,579
JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
JBrowse link
G Apobec4 apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:70,157,098...70,165,686
Ensembl chr13:70,157,522...70,165,568
JBrowse link
G Arl6ip4 ADP-ribosylation factor like GTPase 6 interacting protein 4 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:37,904,376...37,906,521
Ensembl chr12:37,904,379...37,906,521
JBrowse link
G Brdt bromodomain testis associated IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:3,437,876...3,462,613
Ensembl chr14:3,405,995...3,462,629
JBrowse link
G C1qbp complement C1q binding protein IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:57,613,876...57,618,527
Ensembl chr10:57,613,879...57,618,527
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:22,577,723...22,622,555
Ensembl chr 8:22,577,715...22,622,560
JBrowse link
G Cdk12 cyclin-dependent kinase 12 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:86,157,186...86,210,657
Ensembl chr10:86,157,608...86,222,707
JBrowse link
G Cir1 corepressor interacting with RBPJ, CIR1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:59,994,547...60,023,843
Ensembl chr 3:59,994,181...60,023,913
JBrowse link
G Clasrp CLK4-associating serine/arginine rich protein IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:80,491,520...80,515,761
Ensembl chr 1:80,491,480...80,515,694
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:143,171,457...143,278,485
Ensembl chr 1:143,171,264...143,278,485
JBrowse link
G Cpsf6 cleavage and polyadenylation specific factor 6 ISO (PMID:14690600) RGD PMID:14690600 NCBI chr 7:60,385,688...60,417,661
Ensembl chr 7:60,385,688...60,416,925
JBrowse link
G Csdc2 cold shock domain containing C2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:123,168,811...123,183,336
Ensembl chr 7:123,168,811...123,183,335
JBrowse link
G Cstf1 cleavage stimulation factor subunit 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:170,380,413...170,392,162
Ensembl chr 3:170,380,719...170,392,160
JBrowse link
G Cstf3 cleavage stimulation factor subunit 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:94,530,586...94,603,378
Ensembl chr 3:94,530,586...94,607,588
JBrowse link
G Ctnnbl1 catenin, beta like 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:154,212,245...154,373,170
Ensembl chr 3:154,212,202...154,373,169
JBrowse link
G Da2-19 uncharacterized LOC302729 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:48,196,789...48,213,506
Ensembl chr  X:48,196,916...48,213,505
JBrowse link
G Ddx1 DEAD-box helicase 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:38,422,892...38,453,762
Ensembl chr 6:38,422,888...38,453,797
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:130,001,387...130,144,557
Ensembl chr 5:130,001,372...130,085,838
JBrowse link
G Ern2 endoplasmic reticulum to nucleus signaling 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:192,126,023...192,142,865
Ensembl chr 1:192,126,023...192,142,854
JBrowse link
G Fblim1 filamin binding LIM protein 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:160,122,466...160,158,921
Ensembl chr 5:160,122,425...160,158,386
JBrowse link
G Fmr1 FMRP translational regulator 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
G Gpatch1 G patch domain containing 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:91,529,096...91,578,032
Ensembl chr 1:91,529,112...91,578,048
JBrowse link
G H2afb3 H2A histone family, member B3 ISO (PMID:22795134) RGD PMID:22795134 NCBI chr  X:88,602,135...88,602,485
Ensembl chr  X:88,602,135...88,602,485
JBrowse link
G Habp4 hyaluronan binding protein 4 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:1,679,561...1,702,245
Ensembl chr17:1,679,627...1,701,623
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:144,865,302...144,871,592
Ensembl chr 7:144,865,608...144,871,585
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ISO
IEA
(PMID:2557628)
GO_REF:0000002
RGD
InterPro
PMID:2557628 GO_REF:0000002 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
JBrowse link
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:62,481,222...62,491,356
Ensembl chr 3:62,481,323...62,487,227
JBrowse link
G Hnrnpf heterogeneous nuclear ribonucleoprotein F IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:149,957,143...149,978,896
Ensembl chr 4:149,957,206...149,978,895
JBrowse link
G Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:35,872,619...35,879,911
Ensembl chr10:35,870,232...35,879,910
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:6,664,730...6,676,753
Ensembl chr17:6,665,659...6,676,654
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:86,994,090...87,006,776
Ensembl chr 1:86,996,093...87,006,776
JBrowse link
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:2,698,983...2,729,715
Ensembl chr 6:2,699,961...2,729,394
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:44,989,401...44,993,261
Ensembl chr 8:44,990,014...44,993,179
JBrowse link
G Iws1 interacts with SUPT6H, CTD assembly factor 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr18:24,849,508...24,891,339
Ensembl chr18:24,849,545...24,880,317
JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:105,781,752...105,787,803
Ensembl chr10:105,781,753...105,787,803
JBrowse link
G Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:147,927,145...147,953,093
Ensembl chr 5:147,927,152...147,953,093
JBrowse link
G Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:39,501,431...40,008,707
Ensembl chr 9:39,539,530...40,008,680
JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 IDA RGD PMID:11118435 RGD:632715 NCBI chr 7:110,031,819...110,179,475
Ensembl chr 7:110,031,696...110,179,468
JBrowse link
G Khsrp KH-type splicing regulatory protein IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:10,013,795...10,023,670
Ensembl chr 9:10,013,854...10,022,924
JBrowse link
G Larp7 La ribonucleoprotein 7, transcriptional regulator IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:231,866,888...231,882,002
Ensembl chr 2:231,867,135...231,881,939
JBrowse link
G Lgals3 galectin 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:24,153,602...24,165,537
Ensembl chr15:24,141,651...24,165,537
JBrowse link
G LOC100910882 RNA-binding protein 39-like IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:152,226,011...152,259,236
Ensembl chr 3:151,691,514...151,724,654
Ensembl chr 3:151,691,514...151,724,654
JBrowse link
G LOC108348175 protein quaking-like IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:50,828,585...50,936,459 JBrowse link
G LOC679894 similar to THO complex subunit 2 (Tho2) IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:6,561,962...6,601,906
Ensembl chr14:6,581,983...6,587,141
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr16:71,046,475...71,057,883
Ensembl chr16:71,046,475...71,057,883
JBrowse link
G Magoh mago homolog, exon junction complex subunit IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:127,480,465...127,487,617
Ensembl chr 5:127,480,485...127,487,603
JBrowse link
G Mbnl2 muscleblind-like splicing regulator 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:105,640,097...105,797,933
Ensembl chr15:105,640,097...105,797,932
JBrowse link
G Mettl3 methyltransferase-like 3 ISO (MGI:MGI:5527005|PMID:24209618) RGD PMID:24209618 MGI:MGI:5527005 NCBI chr15:28,710,299...28,721,491
Ensembl chr15:28,710,300...28,721,127
JBrowse link
G Mtpap mitochondrial poly(A) polymerase IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:56,046,507...56,068,185
Ensembl chr17:56,046,509...56,068,125
JBrowse link
G Nsrp1 nuclear speckle splicing regulatory protein 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:63,098,115...63,131,779
Ensembl chr10:63,098,116...63,133,185
JBrowse link
G Nudt21 nudix hydrolase 21 ISO
IBA
ISS
(PMID:8626397)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:8626397, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:11,451,366...11,470,637
Ensembl chr19:11,450,760...11,467,644
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:75,409,581...75,421,874
Ensembl chr 7:75,409,581...75,422,268
JBrowse link
G Pabpn1 poly(A) binding protein, nuclear 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:33,555,640...33,560,251
Ensembl chr15:33,555,640...33,560,242
JBrowse link
G Pan2 poly(A) specific ribonuclease subunit PAN2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:2,717,021...2,736,541
Ensembl chr 7:2,718,700...2,736,157
JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:9,214,116...9,331,901
Ensembl chr12:9,216,536...9,331,195
JBrowse link
G Pdcd11 programmed cell death 11 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:266,866,931...266,908,042
Ensembl chr 1:266,866,931...266,908,042
JBrowse link
G Pde12 phosphodiesterase 12 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:2,357,028...2,367,069
Ensembl chr16:2,357,028...2,367,253
JBrowse link
G Phrf1 PHD and ring finger domains 1 IMP RGD PMID:8692929 RGD:1299392 NCBI chr 1:214,215,673...214,248,906
Ensembl chr 1:214,215,992...214,248,901
JBrowse link
G Pnn pinin, desmosome associated protein IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:80,159,364...80,167,677
Ensembl chr 6:80,159,364...80,167,677
JBrowse link
G Ppil3 peptidylprolyl isomerase like 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:65,315,407...65,329,145
Ensembl chr 9:65,315,410...65,329,066
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO
IEA
(PMID:17594903)
GO_REF:0000107
RGD
Ensembl
PMID:17594903 GO_REF:0000107 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Prmt9 protein arginine methyltransferase 9 ISO (PMID:25737013) RGD PMID:25737013 NCBI chr19:34,067,008...34,105,626
Ensembl chr19:34,070,632...34,105,610
JBrowse link
G Prpf18 pre-mRNA processing factor 18 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:77,601,914...77,632,507
Ensembl chr17:77,601,877...77,663,980
JBrowse link
G Prpf38b pre-mRNA processing factor 38B IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:211,706,245...211,715,271
Ensembl chr 2:211,706,228...211,715,311
JBrowse link
G Prpf4b pre-mRNA processing factor 4B IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:30,680,454...30,714,542
Ensembl chr17:30,683,640...30,714,495
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IMP
IEA
GO_REF:0000043 UniProt PMID:16177139 GO_REF:0000043, RGD:10045980 NCBI chr 7:12,663,965...12,673,723
Ensembl chr 7:12,663,965...12,673,718
JBrowse link
G Ptbp3 polypyrimidine tract binding protein 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:76,670,074...76,756,196
Ensembl chr 5:76,673,990...76,756,147
JBrowse link
G Puf60 poly-U binding splicing factor 60 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:117,129,237...117,140,234
Ensembl chr 7:117,129,237...117,140,214
JBrowse link
G Qk quaking IMP RGD PMID:21253564 RGD:10045996 NCBI chr 1:50,983,647...51,050,692 JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:192,933,264...192,965,160
Ensembl chr 1:192,933,540...192,965,158
JBrowse link
G Rbfox1 RNA binding fox-1 homolog 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:8,312,961...10,437,778
Ensembl chr10:8,312,961...8,654,892
JBrowse link
G Rbfox2 RNA binding fox-1 homolog 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:118,157,093...118,396,733
Ensembl chr 7:118,156,946...118,396,728
JBrowse link
G Rbfox3 RNA binding fox-1 homolog 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:107,517,916...107,850,764
Ensembl chr10:107,516,995...107,539,658
JBrowse link
G Rbm20 RNA binding motif protein 20 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:274,391,932...274,589,816
Ensembl chr 1:274,391,932...274,589,816
JBrowse link
G Rbm25l1 RNA binding motif protein 25-like 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:10,457,316...10,460,540
Ensembl chr10:10,457,320...10,460,756
JBrowse link
G Rbm26 RNA binding motif protein 26 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:89,262,683...89,339,323
Ensembl chr15:89,266,710...89,339,323
JBrowse link
G Rbm27 RNA binding motif protein 27 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:36,596,568...36,657,157
Ensembl chr18:36,596,585...36,656,314
JBrowse link
G Rbm39 RNA binding motif protein 39 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:151,691,498...151,724,723
Ensembl chr 3:151,691,514...151,724,654
JBrowse link
G Rbm4 RNA binding motif protein 4 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:220,038,403...220,049,756
Ensembl chr 1:220,039,734...220,048,966
JBrowse link
G Rbmxl1b RNA binding motif protein, X-linked-like 1B IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:42,186,612...42,188,294
Ensembl chr 4:42,186,612...42,188,289
JBrowse link
G Rnasel ribonuclease L IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:71,188,712...71,202,636
Ensembl chr13:71,192,142...71,202,625
JBrowse link
G Scaf1 SR-related CTD-associated factor 1 IMP RGD PMID:8692929 RGD:1299392 NCBI chr 1:100,997,724...101,010,855
Ensembl chr 1:100,997,745...101,008,266
JBrowse link
G Scaf4 SR-related CTD-associated factor 4 IMP RGD PMID:8692929 RGD:1299392 NCBI chr11:30,371,713...30,428,073
Ensembl chr11:30,371,713...30,428,073
JBrowse link
G Scaf8 SR-related CTD-associated factor 8 IMP RGD PMID:8692929 RGD:1299392 NCBI chr 1:44,017,801...44,120,619
Ensembl chr 1:44,019,059...44,120,615
JBrowse link
G Sf3a1 splicing factor 3a, subunit 1 ISO (PMID:15647371) RGD PMID:15647371 NCBI chr14:84,393,182...84,413,931
Ensembl chr14:84,393,182...84,413,931
JBrowse link
G Sf3a2 splicing factor 3a, subunit 2 ISO (PMID:15647371) RGD PMID:15647371 NCBI chr 7:11,777,826...11,784,373
Ensembl chr 7:11,777,826...11,783,849
JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 ISO (PMID:15647371) RGD PMID:15647371 NCBI chr 5:142,702,721...142,722,350
Ensembl chr 5:142,702,685...142,722,341
JBrowse link
G Smn1 survival of motor neuron 1, telomeric IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:30,360,101...30,371,147
Ensembl chr 2:30,360,100...30,371,147
JBrowse link
G Smndc1 survival motor neuron domain containing 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:274,096,068...274,107,138
Ensembl chr 1:274,096,068...274,107,138
JBrowse link
G Snrnp27 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:118,478,075...118,487,633
Ensembl chr 4:118,478,075...118,534,280
JBrowse link
G Son SON DNA and RNA binding protein ISO
IBA
(PMID:21504830)
PMID:21873635
RGD PMID:21504830, PMID:21873635 RGD:13792537 NCBI chr11:31,806,598...31,837,769
Ensembl chr11:31,806,618...31,837,763
JBrowse link
G Srek1 splicing regulatory glutamic acid and lysine rich protein 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:33,806,035...33,841,594
Ensembl chr 2:33,809,807...33,841,499
JBrowse link
G Srek1ip1 SREK1-interacting protein 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:34,923,187...34,940,410 JBrowse link
G Srrm1 serine and arginine repetitive matrix 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:153,675,619...153,708,187
Ensembl chr 5:153,675,624...153,708,170
JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 ISO
IBA
(MGI:MGI:4414616|PMID:19737518)
PMID:21873635
RGD PMID:19737518, PMID:21873635 MGI:MGI:4414616, RGD:13792537 NCBI chr12:45,726,192...45,884,644
Ensembl chr12:45,727,112...45,882,548
JBrowse link
G Sugp1 SURP and G patch domain containing 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:21,100,923...21,131,795
Ensembl chr16:21,100,924...21,131,795
JBrowse link
G Sugp2 SURP and G patch domain containing 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:20,908,162...20,939,574
Ensembl chr16:20,910,177...20,939,545
JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:75,032,365...75,038,547
Ensembl chr10:75,032,365...75,038,547
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342
JBrowse link
G Tardbp TAR DNA binding protein IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:165,432,089...165,442,232
Ensembl chr 5:165,432,095...165,442,048
JBrowse link
G Tcerg1 transcription elongation regulator 1 ISO
IEA
(PMID:20215116)
GO_REF:0000107
RGD
Ensembl
PMID:20215116 GO_REF:0000107 NCBI chr18:36,796,290...36,889,966
Ensembl chr18:36,829,062...36,889,966
JBrowse link
G Tdrd3 tudor domain containing 3 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:70,732,164...70,864,855
Ensembl chr15:70,790,125...70,859,185
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:22,746,290...22,798,252
Ensembl chr 2:22,747,547...22,798,214
JBrowse link
G Thoc2 THO complex 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:128,153,824...128,268,327
Ensembl chr  X:128,161,895...128,268,322
JBrowse link
G Thoc5 THO complex 5 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:85,138,219...85,171,729
Ensembl chr14:85,142,279...85,171,726
JBrowse link
G Thoc6 THO complex 6 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:12,989,135...12,994,495
Ensembl chr10:12,989,135...12,994,495
JBrowse link
G Thoc7 THO complex 7 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:12,569,235...12,584,101
Ensembl chr15:12,569,235...12,584,094
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:144,178,248...144,221,318
Ensembl chr 5:144,179,023...144,221,263
JBrowse link
G Trub2 TruB pseudouridine synthase family member 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:8,338,479...8,348,746
Ensembl chr 3:8,338,484...8,348,746
JBrowse link
G Tsen15 tRNA splicing endonuclease subunit 15 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:69,765,093...69,781,019
Ensembl chr13:69,765,091...69,781,019
JBrowse link
G Tsen2 tRNA splicing endonuclease subunit 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:147,455,506...147,490,869
Ensembl chr 4:147,455,533...147,490,733
JBrowse link
G Tsen34 tRNA splicing endonuclease subunit 34 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:64,023,924...64,031,756
Ensembl chr 1:64,024,240...64,030,175
Ensembl chr 1:64,024,240...64,030,175
JBrowse link
G Tsen34l1 tRNA splicing endonuclease subunit 34-like 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:64,092,224...64,100,061
Ensembl chr 1:64,092,226...64,099,277
JBrowse link
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:225,151,462...225,162,445
Ensembl chr 1:225,151,404...225,162,595
JBrowse link
G Tut4 terminal uridylyl transferase 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:128,063,880...128,168,726
Ensembl chr 5:128,083,118...128,168,207
JBrowse link
G Tut7 terminal uridylyl transferase 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:5,225,854...5,279,674
Ensembl chr17:5,225,835...5,271,794
JBrowse link
G Virma vir like m6A methyltransferase associated IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:25,042,743...25,121,403
Ensembl chr 5:25,042,710...25,120,264
JBrowse link
G Wtap WT1 associated protein IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:47,942,500...47,967,633
Ensembl chr 1:47,942,500...47,967,631
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:141,224,858...141,298,272
Ensembl chr 3:141,225,290...141,298,265
JBrowse link
G Ybx1 Y box binding protein 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:103,308,032...103,313,074
Ensembl chr 6:103,308,045...103,313,074
JBrowse link
G Zfp830 zinc finger protein 830 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:70,118,250...70,119,714
Ensembl chr10:70,118,250...70,119,716
JBrowse link
G Zranb2 zinc finger RANBP2-type containing 2 IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:263,864,088...263,877,872
Ensembl chr 2:263,864,331...263,877,821
JBrowse link
mRNA pseudouridine synthesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkc1 dyskerin pseudouridine synthase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:155,844,914...155,862,363
Ensembl chr  X:155,844,857...155,862,475
JBrowse link
G Pus1 pseudouridine synthase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:51,936,721...51,945,930
Ensembl chr12:51,937,175...51,945,928
JBrowse link
G Pus3 pseudouridine synthase 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:36,760,874...36,769,167
Ensembl chr 8:36,766,977...36,769,162
JBrowse link
G Pus7 pseudouridine synthase 7 ISO (PMID:28073919) RGD PMID:28073919 NCBI chr 4:7,889,727...7,931,357
Ensembl chr 4:7,889,869...7,930,706
JBrowse link
G Trub1 TruB pseudouridine synthase family member 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:28073919)
UniProt
RGD
PMID:28073919, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:278,311,362...278,418,347
Ensembl chr 1:278,311,244...278,418,336
JBrowse link
mRNA splice site selection term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP, Elav-like family member 1 ISO
IBA
(MGI:MGI:1930458|PMID:11158314)
PMID:21873635
(PMID:11158314)
RGD PMID:11158314, PMID:21873635 MGI:MGI:1930458, RGD:13792537 NCBI chr 3:79,768,900...79,844,548
Ensembl chr 3:79,823,945...79,842,082
JBrowse link
G Celf2 CUGBP, Elav-like family member 2 ISO
IBA
IEA
(MGI:MGI:1930458|PMID:11158314)
PMID:21873635
(PMID:11158314)
GO_REF:0000107
RGD
Ensembl
PMID:11158314, PMID:21873635 GO_REF:0000107, MGI:MGI:1930458, RGD:13792537 NCBI chr17:75,259,269...75,660,154
Ensembl chr17:75,352,389...75,654,951
JBrowse link
G Celf3 CUGBP, Elav-like family member 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:195,716,373...195,732,872
Ensembl chr 2:195,719,543...195,730,274
JBrowse link
G Celf4 CUGBP, Elav-like family member 4 ISO
IBA
(MGI:MGI:1930458|PMID:11158314)
PMID:21873635
RGD PMID:11158314, PMID:21873635 MGI:MGI:1930458, RGD:13792537 NCBI chr18:17,689,090...18,079,835
Ensembl chr18:17,698,038...17,716,880
JBrowse link
G Celf5 CUGBP, Elav-like family member 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:11,095,449...11,119,941
Ensembl chr 7:11,095,468...11,119,941
JBrowse link
G Celf6 CUGBP, Elav-like family member 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:64,364,491...64,428,452
Ensembl chr 8:64,364,741...64,428,386
JBrowse link
G Khdc4 KH domain containing 4, pre-mRNA splicing factor ISO (PMID:19641227) RGD PMID:19641227 NCBI chr 2:188,051,657...188,080,280
Ensembl chr 2:188,052,236...188,080,301
JBrowse link
G Luc7l LUC7-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:15,538,878...15,572,651
Ensembl chr10:15,538,872...15,568,638
JBrowse link
G Luc7l2 LUC7-like 2 pre-mRNA splicing factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:66,290,319...66,357,970
Ensembl chr 4:66,290,389...66,354,711
JBrowse link
G Luc7l3 LUC7-like 3 pre-mRNA splicing factor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:81,991,147...82,027,119
Ensembl chr10:81,991,147...82,027,119
JBrowse link
G Mbnl1 muscleblind-like splicing regulator 1 ISO MGI:MGI:3052922 (MGI:MGI:2682447|PMID:14671308), (MGI:MGI:3655436|PMID:16717059) RGD PMID:14671308, PMID:16717059 MGI:MGI:2682447, MGI:MGI:3655436 NCBI chr 2:150,698,248...150,867,791
Ensembl chr 2:150,756,185...150,869,690
JBrowse link
G Nol3 nucleolar protein 3 ISO
IEA
ISS
(PMID:10196175)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:10196175 GO_REF:0000024, GO_REF:0000107 NCBI chr19:37,232,567...37,236,668
Ensembl chr19:37,235,001...37,236,649
JBrowse link
G Ptbp2 polypyrimidine tract binding protein 2 ISO MGI:MGI:4124189 (MGI:MGI:1859428|PMID:10829067), (MGI:MGI:5430666|PMID:22802532) RGD PMID:10829067, PMID:22802532 MGI:MGI:1859428, MGI:MGI:5430666 NCBI chr 2:223,261,444...223,323,075
Ensembl chr 2:223,262,852...223,322,585
JBrowse link
G Puf60 poly-U binding splicing factor 60 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:117,129,237...117,140,234
Ensembl chr 7:117,129,237...117,140,214
JBrowse link
G Rbmx RNA binding motif protein, X-linked IMP RGD PMID:19282290 RGD:2316827 NCBI chr  X:159,881,835...159,891,405
Ensembl chr  X:159,884,885...159,891,326
JBrowse link
G Rbmxl1 RBMX like 1 IDA PMID:19282290 UniProt PMID:19282290 RGD:2316827 NCBI chr19:33,081,473...33,084,988
Ensembl chr19:33,083,412...33,084,915
JBrowse link
G Setx senataxin ISO (PMID:19515850) RGD PMID:19515850 NCBI chr 3:7,680,430...7,731,815
Ensembl chr 3:7,686,503...7,730,539
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 ISO (PMID:9774382) RGD PMID:9774382 NCBI chr 5:154,205,358...154,219,550
Ensembl chr 5:154,205,402...154,213,801
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 ISO
IBA
ISS
(PMID:12549914)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:12549914, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:159,305,345...159,310,668
Ensembl chr 3:159,305,345...159,310,668
JBrowse link
G Ythdc1 YTH domain containing 1 ISO
ISS
(PMID:20167602)
GO_REF:0000024
RGD
UniProt
PMID:20167602 GO_REF:0000024 NCBI chr14:22,971,834...23,002,326
Ensembl chr14:22,971,836...23,002,011
JBrowse link
mRNA splicing, via endonucleolytic cleavage and ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ern1 endoplasmic reticulum to nucleus signaling 1 ISO (PMID:11779464), (PMID:19328063), (PMID:19622636), (PMID:20625543), (PMID:21317875) RGD PMID:11779464, PMID:19328063, PMID:19622636, PMID:20625543, PMID:21317875 NCBI chr10:94,588,555...94,682,072
Ensembl chr10:94,588,555...94,681,914
JBrowse link
mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07008911.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 2:78,282,959...78,283,473 JBrowse link
G AABR07037800.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:31,054,394...31,055,344 JBrowse link
G AABR07042226.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:150,660,743...150,666,309 JBrowse link
G AABR07042323.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:152,781,188...152,781,574 JBrowse link
G AABR07054367.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 3:150,135,821...150,153,775 JBrowse link
G AC113901.1 IEA GO_REF:0000002 InterPro GO_REF:0000002 Ensembl chr 2:78,427,178...78,427,751 JBrowse link
G AC126899.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr19:44,396,248...44,396,610 JBrowse link
G Aqr aquarius intron-binding spliceosomal factor ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 3:105,570,399...105,640,431
Ensembl chr 3:105,570,292...105,640,463
JBrowse link
G Bcas2 BCAS2, pre-mRNA processing factor ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 2:205,662,633...205,670,514
Ensembl chr 2:205,662,588...205,670,511
JBrowse link
G Bud13 BUD13 homolog ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(PMID:29360106)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29360106, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 8:50,573,026...50,588,860
Ensembl chr 8:50,573,026...50,588,858
JBrowse link
G Bud31 BUD31 homolog ISO
IBA
(PMID:28076346)
PMID:21873635
RGD PMID:28076346, PMID:21873635 RGD:13792537 NCBI chr12:11,232,963...11,240,449
Ensembl chr12:11,232,964...11,240,400
JBrowse link
G Casc3 CASC3 exon junction complex subunit ISS
ISO
IEA
GO_REF:0000024
(PMID:29301961)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29301961 GO_REF:0000024, GO_REF:0000107 NCBI chr10:86,724,534...86,744,485
Ensembl chr10:86,724,427...86,745,927
JBrowse link
G Cdc40 cell division cycle 40 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr20:48,503,973...48,574,546
Ensembl chr20:48,503,973...48,574,546
JBrowse link
G Cdc5l cell division cycle 5-like ISO
ISS
(PMID:28076346)
GO_REF:0000024
RGD
UniProt
PMID:28076346 GO_REF:0000024 NCBI chr 9:17,949,764...17,988,514
Ensembl chr 9:17,949,764...17,988,509
JBrowse link
G Crnkl1 crooked neck pre-mRNA splicing factor 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:28076346)
UniProt
RGD
PMID:28076346, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 6:18,349,226...18,351,540
Ensembl chr 6:18,349,167...18,351,536
JBrowse link
G Cwc15 CWC15 spliceosome-associated protein ISS
ISO
GO_REF:0000024
(PMID:28076346)
UniProt
RGD
PMID:28076346 GO_REF:0000024 NCBI chr 8:12,994,131...13,004,958
Ensembl chr 8:12,994,155...13,004,957
JBrowse link
G Cwc22 CWC22 spliceosome associated protein homolog ISO
IBA
(PMID:29360106)
PMID:21873635
RGD PMID:29360106, PMID:21873635 RGD:13792537 NCBI chr 3:64,731,145...64,780,127
Ensembl chr 3:64,731,381...64,766,472
JBrowse link
G Cwc25 CWC25 spliceosome-associated protein homolog ISO
IBA
(PMID:29301961)
PMID:21873635
RGD PMID:29301961, PMID:21873635 RGD:13792537 NCBI chr10:85,684,898...85,709,568
Ensembl chr10:85,684,898...85,709,568
JBrowse link
G Cwf19l1 CWF19 like cell cycle control factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:263,887,014...263,910,251
Ensembl chr 1:263,887,015...263,910,251
JBrowse link
G Cwf19l2 CWF19 like cell cycle control factor 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:18,970,616...19,037,176
Ensembl chr 6:18,970,564...19,055,924
JBrowse link
G Dbr1 debranching RNA lariats 1 ISO
IBA
(MGI:MGI:1890021|PMID:10982890)
PMID:21873635
RGD PMID:10982890, PMID:21873635 MGI:MGI:1890021, RGD:13792537 NCBI chr 8:107,826,690...107,838,186
Ensembl chr 8:107,826,424...107,838,339
JBrowse link
G Ddx23 DEAD-box helicase 23 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:140,325,453...140,342,730
Ensembl chr 7:140,325,431...140,342,727
JBrowse link
G Ddx39a DExD-box helicase 39A ISO
IBA
UniProtKB:Q07478 (PMID:15047853)
PMID:21873635
RGD PMID:15047853, PMID:21873635 RGD:13792537 NCBI chr19:24,846,530...24,854,886
Ensembl chr19:24,846,938...24,854,953
JBrowse link
G Ddx39b DExD-box helicase 39B ISO
IBA
UniProtKB:Q07478 (PMID:15047853)
PMID:21873635
RGD PMID:15047853, PMID:21873635 RGD:13792537 NCBI chr20:4,806,103...4,818,600
Ensembl chr20:4,806,108...4,818,568
JBrowse link
G Ddx41 DEAD-box helicase 41 ISO
IBA
(PMID:25920683)
PMID:21873635
RGD PMID:25920683, PMID:21873635 RGD:13792537 NCBI chr17:9,631,925...9,637,317
Ensembl chr17:9,631,925...9,637,316
JBrowse link
G Ddx46 DEAD-box helicase 46 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:9,475,275...9,519,545
Ensembl chr17:9,475,538...9,519,595
JBrowse link
G Dhx16 DEAH-box helicase 16 ISO (PMID:20423332), (PMID:25296192), (PMID:29360106) RGD PMID:20423332, PMID:25296192, PMID:29360106 NCBI chr20:3,368,971...3,386,087
Ensembl chr20:3,367,150...3,386,106
JBrowse link
G Dhx38 DEAH-box helicase 38 ISO
IBA
(PMID:9524131)
PMID:21873635
RGD PMID:9524131, PMID:21873635 RGD:13792537 NCBI chr19:42,110,291...42,127,540
Ensembl chr19:42,110,327...42,127,542
JBrowse link
G Dhx8 DEAH-box helicase 8 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr10:89,645,979...89,683,839
Ensembl chr10:89,645,973...89,683,446
JBrowse link
G Eftud2 elongation factor Tu GTP binding domain containing 2 ISO
IBA
(PMID:28076346)
PMID:21873635
RGD PMID:28076346, PMID:21873635 RGD:13792537 NCBI chr10:90,932,071...90,983,971
Ensembl chr10:90,932,075...90,983,928
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 ISS
ISO
GO_REF:0000024
(PMID:29301961)
UniProt
RGD
PMID:29301961 GO_REF:0000024 NCBI chr10:108,415,201...108,425,195
Ensembl chr10:108,415,202...108,425,206
JBrowse link
G Gpkow G patch domain and KOW motifs ISO (PMID:25296192) RGD PMID:25296192 NCBI chr  X:15,636,567...15,651,332
Ensembl chr  X:15,636,563...15,651,332
JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:26321680)
Ensembl
UniProt
RGD
PMID:26321680 GO_REF:0000024, GO_REF:0000107 NCBI chr 4:81,237,496...81,241,281
Ensembl chr 4:81,237,496...81,241,282
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C ISO
ISS
(PMID:25719671)
GO_REF:0000024
RGD
UniProt
PMID:25719671 GO_REF:0000024 NCBI chr15:28,486,605...28,517,353
Ensembl chr15:28,486,617...28,517,353
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:18,516,253...18,554,536
Ensembl chr 7:18,516,512...18,554,227
JBrowse link
G Htatsf1 HIV-1 Tat specific factor 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:159,514,053...159,528,281
Ensembl chr  X:159,513,800...159,528,281
JBrowse link
G Ik IK cytokine ISS
ISO
GO_REF:0000024
(PMID:28781166)
UniProt
RGD
PMID:28781166 GO_REF:0000024 NCBI chr18:29,587,901...29,602,705
Ensembl chr18:29,587,901...29,608,338
JBrowse link
G Isy1 ISY1 splicing factor homolog ISS
ISO
GO_REF:0000024
(PMID:29301961)
UniProt
RGD
PMID:29301961 GO_REF:0000024 NCBI chr 4:119,721,659...119,742,349
Ensembl chr 4:119,721,660...119,742,349
JBrowse link
G LOC100359574 NHP2 non-histone chromosome protein 2-like 1-like ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:281,863,115...281,864,546
Ensembl chr 1:281,863,918...281,864,304
Ensembl chr 7:281,863,918...281,864,304
JBrowse link
G LOC100360750 Sm protein F-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:47,380,376...47,382,933
Ensembl chr13:47,380,406...47,382,955
Ensembl chr19:47,380,406...47,382,955
JBrowse link
G LOC102548514 crooked neck-like protein 1-like ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:140,125,232...140,141,730
Ensembl chr 3:140,126,797...140,141,679
JBrowse link
G LOC500684 hypothetical protein LOC500684 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:103,932,428...103,935,122
Ensembl chr 6:103,932,428...103,935,122
JBrowse link
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:91,588,215...91,588,629
Ensembl chr 4:118,167,294...118,174,842
Ensembl chr 1:118,167,294...118,174,842
JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ISO
IBA
(PMID:28781166)
PMID:21873635
RGD PMID:28781166, PMID:21873635 RGD:13792537 NCBI chr20:4,966,817...4,970,567
Ensembl chr20:4,966,817...4,970,568
JBrowse link
G Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated ISO
IBA
(PMID:10369684), (PMID:10523320), (PMID:28781166)
PMID:21873635
RGD PMID:10369684, PMID:10523320, PMID:28781166, PMID:21873635 RGD:13792537 NCBI chr 4:123,162,086...123,168,330
Ensembl chr 4:123,162,086...123,168,330
JBrowse link
G Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:28781166) RGD PMID:28781166 NCBI chr16:20,506,399...20,511,818
Ensembl chr16:20,506,399...20,511,818
JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated ISO
IBA
(PMID:28781166)
PMID:21873635
RGD PMID:28781166, PMID:21873635 RGD:13792537 NCBI chr 4:87,016,003...87,019,219
Ensembl chr 4:87,016,003...87,019,219
Ensembl chr 6:87,016,003...87,019,219
JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated ISO
IBA
(PMID:28781166)
PMID:21873635
RGD PMID:28781166, PMID:21873635 RGD:13792537 NCBI chr19:32,770,640...32,785,215
Ensembl chr19:32,770,655...32,785,215
JBrowse link
G Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 7:11,724,932...11,732,020
Ensembl chr 7:11,724,962...11,727,388
JBrowse link
G Lsm8 LSM8 homolog, U6 small nuclear RNA associated ISO
IBA
(PMID:28781166)
PMID:21873635
RGD PMID:28781166, PMID:21873635 RGD:13792537 NCBI chr 4:45,555,077...45,560,943
Ensembl chr 4:45,555,077...45,560,943
JBrowse link
G Magohb mago homolog B, exon junction complex subunit ISO (PMID:28502770) RGD PMID:28502770 NCBI chr 4:165,514,584...165,522,366
Ensembl chr 4:165,514,530...165,522,418
JBrowse link
G Mettl14 methyltransferase like 14 ISO (PMID:25719671) RGD PMID:25719671 NCBI chr 2:227,566,811...227,583,047
Ensembl chr 2:227,566,815...227,582,895
JBrowse link
G Mettl3 methyltransferase-like 3 NOT ISO
IBA
(MGI:MGI:5621227|PMID:25569111)
PMID:21873635
(PMID:25719671), (PMID:26321680)
(MGI:MGI:6095345|PMID:28637692)
RGD PMID:25569111, PMID:25719671, PMID:26321680, PMID:28637692, PMID:21873635 MGI:MGI:5621227, MGI:MGI:6095345, RGD:13792537 NCBI chr15:28,710,299...28,721,491
Ensembl chr15:28,710,300...28,721,127
JBrowse link
G Mfap1a microfibrillar-associated protein 1A ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 3:113,428,855...113,445,435
Ensembl chr 3:113,272,850...113,445,435
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:61,734,118...61,767,098
Ensembl chr 5:61,734,118...61,766,481
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:72,071,838...72,103,087
Ensembl chr11:72,921,282...72,929,003
JBrowse link
G NEWGENE_1359268 Smad nuclear interacting protein 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:143,063,206...143,070,899
Ensembl chr 5:143,063,099...143,070,884
JBrowse link
G Nono non-POU domain containing, octamer-binding IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:71,324,365...71,342,225
Ensembl chr  X:71,324,365...71,342,225
JBrowse link
G Nova1 NOVA alternative splicing regulator 1 ISO
IBA
IEA
MGI:MGI:2386947 (MGI:MGI:1353882|PMID:10719891)
PMID:21873635
GO_REF:0000107
GO_REF:0000002
RGD
Ensembl
InterPro
PMID:10719891, PMID:21873635 GO_REF:0000002, GO_REF:0000107, MGI:MGI:1353882, RGD:13792537 NCBI chr 6:66,960,126...67,085,836
Ensembl chr 6:66,963,510...67,085,390
JBrowse link
G Nova2 NOVA alternative splicing regulator 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:79,831,737...79,866,147
Ensembl chr 1:79,831,534...79,865,807
JBrowse link
G Phf5a PHD finger protein 5A ISS
IBA
IEA
ISO
GO_REF:0000024
PMID:21873635
GO_REF:0000002
(PMID:12234937), (PMID:29360106)
UniProt
InterPro
RGD
PMID:12234937, PMID:29360106, PMID:21873635 GO_REF:0000002, GO_REF:0000024, RGD:13792537 NCBI chr 7:123,095,286...123,101,851
Ensembl chr 7:123,095,288...123,101,869
JBrowse link
G Plrg1 pleiotropic regulator 1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:28076346)
UniProt
RGD
PMID:28076346, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 2:182,040,338...182,056,669
Ensembl chr 2:182,040,318...182,056,673
JBrowse link
G Ppie peptidylprolyl isomerase E ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 5:140,822,141...140,835,244
Ensembl chr 5:140,822,141...140,834,959
JBrowse link
G Ppil1 peptidylprolyl isomerase like 1 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr20:6,515,638...6,864,571
Ensembl chr20:6,515,638...6,864,571
JBrowse link
G Prpf19 pre-mRNA processing factor 19 ISO
ISS
(PMID:20176811)
GO_REF:0000024
RGD
UniProt
PMID:20176811 GO_REF:0000024 NCBI chr 1:226,947,065...226,958,147
Ensembl chr 1:226,947,105...226,958,144
JBrowse link
G Prpf3 pre-mRNA processing factor 3 ISO
IBA
(PMID:28781166)
PMID:21873635
RGD PMID:28781166, PMID:21873635 RGD:13792537 NCBI chr 2:197,947,010...197,971,464
Ensembl chr 2:197,947,010...197,971,463
JBrowse link
G Prpf31 pre-mRNA processing factor 31 ISO
IBA
(PMID:11867543), (PMID:28781166)
PMID:21873635
RGD PMID:11867543, PMID:28781166, PMID:21873635 RGD:13792537 NCBI chr 1:64,150,786...64,162,461
Ensembl chr 1:64,150,786...64,162,461
JBrowse link
G Prpf38a pre-mRNA processing factor 38A ISO (PMID:26673105), (PMID:28781166) RGD PMID:26673105, PMID:28781166 NCBI chr 5:128,174,835...128,186,532
Ensembl chr 5:128,174,835...128,186,532
JBrowse link
G Prpf4 pre-mRNA processing factor 4 ISO
IBA
(PMID:28781166)
PMID:21873635
RGD PMID:28781166, PMID:21873635 RGD:13792537 NCBI chr 5:78,267,248...78,281,172
Ensembl chr 5:78,267,248...78,281,172
JBrowse link
G Prpf40a pre-mRNA processing factor 40 homolog A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:38,680,583...38,741,570
Ensembl chr 3:38,682,146...38,741,113
JBrowse link
G Prpf40b pre-mRNA processing factor 40 homolog B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:140,958,952...140,981,588
Ensembl chr 7:140,967,282...140,981,583
JBrowse link
G Prpf6 pre-mRNA processing factor 6 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:21549338), (PMID:28781166)
UniProt
RGD
PMID:21549338, PMID:28781166, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:177,098,137...177,162,937
Ensembl chr 3:177,098,073...177,162,916
JBrowse link
G Prpf8 pre-mRNA processing factor 8 ISO (PMID:28781166), (PMID:29301961) RGD PMID:28781166, PMID:29301961 NCBI chr10:63,635,239...63,658,360
Ensembl chr10:63,635,219...63,658,361
JBrowse link
G Pspc1 paraspeckle component 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:36,946,914...37,030,273
Ensembl chr15:36,950,257...37,030,281
JBrowse link
G Raver1 ribonucleoprotein, PTB-binding 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:22,092,084...22,111,863
Ensembl chr 8:22,092,094...22,111,863
JBrowse link
G Raver2 ribonucleoprotein, PTB-binding 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:119,903,449...119,982,723
Ensembl chr 5:119,903,507...119,981,047
JBrowse link
G Rbm10 RNA binding motif protein 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:1,754,869...1,786,973
Ensembl chr  X:1,754,861...1,786,978
JBrowse link
G Rbm15 RNA binding motif protein 15 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:210,079,678...210,090,200
Ensembl chr 2:210,081,770...210,088,949
JBrowse link
G Rbm15b RNA binding motif protein 15B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:115,618,242...115,623,068
Ensembl chr 8:115,618,555...115,621,394
JBrowse link
G Rbm41 RNA binding motif protein 41 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:111,272,347...111,325,203
Ensembl chr  X:111,269,490...111,325,186
JBrowse link
G Rbm5 RNA binding motif protein 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:116,502,941...116,532,178
Ensembl chr 8:116,502,937...116,532,169
JBrowse link
G Rbm6 RNA binding motif protein 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:116,535,403...116,635,851
Ensembl chr 8:116,535,403...116,635,851
JBrowse link
G Rbm8a RNA binding motif protein 8A ISS
ISO
GO_REF:0000024
(PMID:29301961)
UniProt
RGD
PMID:29301961 GO_REF:0000024 NCBI chr 2:198,755,261...198,758,028
Ensembl chr 2:198,755,262...198,758,028
JBrowse link
G Rbmx2 RNA binding motif protein, X-linked 2 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:29360106)
UniProt
RGD
PMID:29360106, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr  X:135,550,931...135,558,440
Ensembl chr  X:135,550,834...135,558,440
JBrowse link
G RGD1566078 similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (Sperm specific antigen 1) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:152,781,177...152,781,621 JBrowse link
G Rnf113a1 ring finger protein 113A1 ISO (PMID:29360106) RGD PMID:29360106 NCBI chr  X:123,806,922...123,808,049
Ensembl chr  X:124,516,949...124,518,077
JBrowse link
G Rnpc3 RNA-binding region (RNP1, RRM) containing 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:216,481,457...216,510,051
Ensembl chr 2:216,481,436...216,509,827
JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,786,339...13,796,720
Ensembl chr10:13,786,459...13,796,717
JBrowse link
G Rsrc1 arginine and serine rich coiled-coil 1 ISO
ISS
(PMID:15798186)
GO_REF:0000024
RGD
UniProt
PMID:15798186 GO_REF:0000024 NCBI chr 2:164,126,898...164,533,652 JBrowse link
G Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP ISO (PMID:28781166) RGD PMID:28781166 NCBI chr 1:220,762,496...220,771,158
Ensembl chr 1:220,762,349...220,771,181
JBrowse link
G Sart3 spliceosome associated factor 3, U4/U6 recycling protein ISO
IBA
(PMID:15314151)
PMID:21873635
RGD PMID:15314151, PMID:21873635 RGD:13792537 NCBI chr12:48,628,198...48,656,096
Ensembl chr12:48,628,278...48,656,096
JBrowse link
G Sf1 splicing factor 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:221,735,512...221,749,216
Ensembl chr 1:221,735,517...221,749,086
JBrowse link
G Sf3a1 splicing factor 3a, subunit 1 ISO (PMID:10882114), (PMID:29360106) RGD PMID:10882114, PMID:29360106 NCBI chr14:84,393,182...84,413,931
Ensembl chr14:84,393,182...84,413,931
JBrowse link
G Sf3a2 splicing factor 3a, subunit 2 ISO
ISS
(PMID:29360106)
GO_REF:0000024
RGD
UniProt
PMID:29360106 GO_REF:0000024 NCBI chr 7:11,777,826...11,784,373
Ensembl chr 7:11,777,826...11,783,849
JBrowse link
G Sf3a3 splicing factor 3a, subunit 3 ISO
IBA
(PMID:29360106)
PMID:21873635
RGD PMID:29360106, PMID:21873635 RGD:13792537 NCBI chr 5:142,702,721...142,722,350
Ensembl chr 5:142,702,685...142,722,341
JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 ISO (MGI:MGI:5605165|PMID:23211737)
(PMID:11252167), (PMID:28781166), (PMID:29360106)
RGD PMID:11252167, PMID:23211737, PMID:28781166, PMID:29360106 MGI:MGI:5605165 NCBI chr 9:61,594,620...61,634,510
Ensembl chr 9:61,594,620...61,634,510
JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 ISO
IBA
(PMID:29360106)
PMID:21873635
RGD PMID:29360106, PMID:21873635 RGD:13792537 NCBI chr 1:220,645,685...220,665,611
Ensembl chr 1:220,645,672...220,665,603
JBrowse link
G Sf3b3 splicing factor 3b, subunit 3 ISO
IBA
(PMID:28781166), (PMID:29360106)
PMID:21873635
RGD PMID:28781166, PMID:29360106, PMID:21873635 RGD:13792537 NCBI chr19:43,392,071...43,429,582
Ensembl chr19:43,392,085...43,429,580
JBrowse link
G Sf3b4 splicing factor 3b, subunit 4 ISO (PMID:29360106) RGD PMID:29360106 NCBI chr 2:198,312,428...198,317,180
Ensembl chr 2:198,312,428...198,317,180
JBrowse link
G Sf3b5 splicing factor 3b, subunit 5 ISO
IBA
(PMID:28781166), (PMID:29360106)
PMID:21873635
RGD PMID:28781166, PMID:29360106, PMID:21873635 RGD:13792537 NCBI chr 1:7,101,715...7,102,427
Ensembl chr 1:7,101,715...7,102,426
JBrowse link
G Sf3b6 splicing factor 3B, subunit 6 ISO
IBA
(MGI:MGI:5605165|PMID:23211737)
PMID:21873635
(PMID:27720643)
RGD PMID:23211737, PMID:27720643, PMID:21873635 MGI:MGI:5605165, RGD:13792537 NCBI chr 6:29,991,232...29,999,668
Ensembl chr 6:29,991,307...29,999,410
JBrowse link
G Sfpq splicing factor proline and glutamine rich IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:145,079,803...145,088,517
Ensembl chr 5:145,079,803...145,088,498
JBrowse link
G Slu7 SLU7 homolog, splicing factor IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr10:29,029,556...29,044,919
Ensembl chr10:29,029,590...29,044,583
JBrowse link
G Smu1 SMU1, DNA replication regulator and spliceosomal factor IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:28781166)
Ensembl
UniProt
RGD
PMID:28781166 GO_REF:0000024, GO_REF:0000107 NCBI chr 5:57,042,301...57,061,379
Ensembl chr 5:57,042,705...57,061,365
JBrowse link
G Snip1 Smad nuclear interacting protein 1 ISS
ISO
GO_REF:0000024
(PMID:29360106)
UniProt
RGD
PMID:29360106 GO_REF:0000024 NCBI chr15:19,275,273...19,282,753
Ensembl chr 5:143,063,099...143,070,884
JBrowse link
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
(PMID:29301961), (PMID:8670905)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8670905, PMID:29301961, PMID:21873635 GO_REF:0000024, GO_REF:0000107, RGD:13792537 NCBI chr 3:119,640,324...119,669,651
Ensembl chr 3:119,640,298...119,669,639
JBrowse link
G Snrnp25 small nuclear ribonucleoprotein U11/U12 subunit 25 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:15,685,999...15,689,338
Ensembl chr10:15,686,008...15,689,325
JBrowse link
G Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:37,531,082...37,538,823
Ensembl chr12:37,531,095...37,538,403
JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 ISO
IBA
ISS
(PMID:9531537)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:9531537, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:101,367,470...101,388,153
Ensembl chr 1:101,367,471...101,388,129
JBrowse link
G Snrpa small nuclear ribonucleoprotein polypeptide A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:83,999,670...84,008,429
Ensembl chr 1:83,999,671...84,008,293
JBrowse link
G Snrpa1 small nuclear ribonucleoprotein polypeptide A' ISO
IBA
(PMID:28076346), (PMID:28781166)
PMID:21873635
RGD PMID:28076346, PMID:28781166, PMID:21873635 RGD:13792537 NCBI chr 1:126,961,389...126,974,453
Ensembl chr 1:126,961,389...126,974,453
JBrowse link
G Snrpb small nuclear ribonucleoprotein polypeptides B and B1 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:28076346), (PMID:28781166)
UniProt
RGD
PMID:28076346, PMID:28781166, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 3:122,696,125...122,703,734
Ensembl chr 3:122,695,939...122,703,734
JBrowse link
G Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ISO
IBA
(PMID:28076346), (PMID:28781166)
PMID:21873635
RGD PMID:28076346, PMID:28781166, PMID:21873635 RGD:13792537 NCBI chr 3:137,138,082...137,147,575
Ensembl chr 3:137,137,980...137,147,575
JBrowse link
G Snrpc small nuclear ribonucleoprotein polypeptide C ISO (PMID:8972845) RGD PMID:8972845 NCBI chr20:7,409,401...7,427,581
Ensembl chr20:7,409,401...7,427,581
JBrowse link
G Snrpd1 small nuclear ribonucleoprotein D1 polypeptide ISO (PMID:28076346) RGD PMID:28076346 NCBI chr18:1,866,066...1,876,613
Ensembl chr18:1,866,080...1,876,613
JBrowse link
G Snrpd2 small nuclear ribonucleoprotein D2 polypeptide ISO (PMID:28076346) RGD PMID:28076346 NCBI chr 1:80,057,140...80,059,990
Ensembl chr 1:80,056,755...80,059,996
JBrowse link
G Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ISO (PMID:28076346) RGD PMID:28076346 NCBI chr20:14,080,562...14,095,644
Ensembl chr20:14,080,565...14,095,181
JBrowse link
G Snrpe small nuclear ribonucleoprotein polypeptide E ISO (PMID:28076346) RGD PMID:28076346 NCBI chr13:50,252,707...50,258,951
Ensembl chr 8:129,371,556...129,371,973
JBrowse link
G Snrpf small nuclear ribonucleoprotein polypeptide F ISO
IBA
(PMID:28076346)
PMID:21873635
RGD PMID:28076346, PMID:21873635 RGD:13792537 NCBI chr 7:34,478,331...34,485,034
Ensembl chr 7:34,478,331...34,485,034
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G ISO
IBA
(PMID:28076346)
PMID:21873635
RGD PMID:28076346, PMID:21873635 RGD:13792537 NCBI chr 4:118,167,267...118,174,846
Ensembl chr 4:118,167,294...118,174,842
JBrowse link
G Snrpn small nuclear ribonucleoprotein polypeptide N IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:195,074,328...195,096,460
Ensembl chr 1:195,074,330...195,096,460
JBrowse link
G Snu13 small nuclear ribonucleoprotein 13 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:28781166)
UniProt
RGD
PMID:28781166, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:123,282,754...123,287,721
Ensembl chr 7:123,282,754...123,287,721
JBrowse link
G Snw1 SNW domain containing 1 ISO (PMID:15194481), (PMID:28076346) RGD PMID:15194481, PMID:28076346 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
G Spen spen family transcriptional repressor IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:160,015,573...160,070,915
Ensembl chr 5:160,015,454...160,070,965
JBrowse link
G Srrm2 serine/arginine repetitive matrix 2 ISO (PMID:28076346) RGD PMID:28076346 NCBI chr10:13,128,820...13,162,956
Ensembl chr10:13,145,099...13,162,343
JBrowse link
G Srsf10 serine and arginine rich splicing factor 10 ISO (PMID:9774382) RGD PMID:9774382 NCBI chr 5:154,205,358...154,219,550
Ensembl chr 5:154,205,402...154,213,801
JBrowse link
G Syf2 SYF2 pre-mRNA-splicing factor ISS
ISO
GO_REF:0000024
(PMID:28076346)
UniProt
RGD
PMID:28076346 GO_REF:0000024 NCBI chr 5:153,269,638...153,277,562
Ensembl chr 5:153,269,526...153,277,563
JBrowse link
G Tra2a transformer 2 alpha homolog ISO (PMID:9546399) RGD PMID:9546399 NCBI chr 4:78,905,380...78,924,203
Ensembl chr 4:78,905,380...78,924,181
JBrowse link
G Tra2b transformer 2 beta homolog ISO
ISS
(PMID:9546399)
GO_REF:0000024
RGD
UniProt
PMID:9546399 GO_REF:0000024 NCBI chr11:82,373,828...82,392,208
Ensembl chr11:82,373,870...82,392,083
JBrowse link
G Txnl4a thioredoxin-like 4A ISO (PMID:28781166) RGD PMID:28781166 NCBI chr18:76,725,221...76,740,673
Ensembl chr18:76,725,247...76,740,688
JBrowse link
G Txnl4b thioredoxin-like 4B IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:42,101,081...42,110,223
Ensembl chr19:42,101,902...42,107,601
JBrowse link
G U2af1 U2 small nuclear RNA auxiliary factor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:10,396,652...10,407,564
Ensembl chr20:10,396,621...10,407,554
JBrowse link
G U2af1l4 U2 small nuclear RNA auxiliary factor 1-like 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:89,017,414...89,019,651
Ensembl chr 1:89,017,479...89,019,937
JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 ISO (PMID:1824937) RGD PMID:1824937 NCBI chr 1:72,312,260...72,329,828
Ensembl chr 1:72,312,727...72,329,856
JBrowse link
G Ubl5 ubiquitin-like 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:21,663,257...21,665,049
Ensembl chr 8:21,663,325...21,665,038
JBrowse link
G Usp39 ubiquitin specific peptidase 39 ISO (PMID:11350945) RGD PMID:11350945 NCBI chr 4:100,181,408...100,211,425
Ensembl chr 4:100,181,455...100,213,858
JBrowse link
G Usp49 ubiquitin specific peptidase 49 ISO (PMID:23824326) RGD PMID:23824326 NCBI chr 9:15,314,875...15,375,365
Ensembl chr 9:15,317,413...15,375,365
JBrowse link
G Wbp4 WW domain binding protein 4 ISS
ISO
GO_REF:0000024
(PMID:28781166)
UniProt
RGD
PMID:28781166 GO_REF:0000024 NCBI chr15:61,745,989...61,772,516
Ensembl chr15:61,745,989...61,772,516
JBrowse link
G Wdr83 WD repeat domain 83 IEA
ISO
GO_REF:0000107
(PMID:11991638)
Ensembl
RGD
PMID:11991638 GO_REF:0000107 NCBI chr19:26,188,644...26,194,193
Ensembl chr19:26,188,638...26,194,198
JBrowse link
G Xab2 XPA binding protein 2 ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:28076346)
UniProt
RGD
PMID:28076346, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:2,158,391...2,170,397
Ensembl chr12:2,158,389...2,170,504
JBrowse link
G Ythdc1 YTH domain containing 1 IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:10564280, PMID:21873635 RGD:634512, RGD:13792537 NCBI chr14:22,971,834...23,002,326
Ensembl chr14:22,971,836...23,002,011
JBrowse link
G Zcrb1 zinc finger CCHC-type and RNA binding motif containing 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:134,588,902...134,602,239
Ensembl chr 7:134,588,903...134,602,239
JBrowse link
G Zmat2 zinc finger, matrin type 2 ISO
IBA
(PMID:28781166)
PMID:21873635
RGD PMID:28781166, PMID:21873635 RGD:13792537 NCBI chr18:29,639,991...29,644,626
Ensembl chr18:29,639,872...29,644,652
JBrowse link
G Zrsr1 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1 ISO
IBA
(MGI:MGI:6192413|PMID:29617656)
PMID:21873635
RGD PMID:29617656, PMID:21873635 MGI:MGI:6192413, RGD:13792537 NCBI chr14:107,750,162...107,751,895
Ensembl chr14:107,750,162...107,751,892
JBrowse link
G Zrsr2 zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2 ISO
IBA
(PMID:9237760)
PMID:21873635
RGD PMID:9237760, PMID:21873635 RGD:13792537 NCBI chr  X:32,304,707...32,327,419
Ensembl chr  X:32,304,757...32,328,364
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO (MGI:MGI:3057047|PMID:15480992) RGD PMID:15480992 MGI:MGI:3057047 NCBI chr 4:155,386,367...155,414,034
Ensembl chr 4:155,386,711...155,401,480
JBrowse link
G Axin2 axin 2 ISO
IEA
(PMID:17072303)
GO_REF:0000107
RGD
Ensembl
PMID:17072303 GO_REF:0000107 NCBI chr10:97,212,483...97,238,824
Ensembl chr10:97,212,432...97,239,642
JBrowse link
G Cirbp cold inducible RNA binding protein ISO
ISS
(PMID:11574538)
GO_REF:0000024
RGD
UniProt
PMID:11574538 GO_REF:0000024 NCBI chr 7:12,400,066...12,405,054
Ensembl chr 7:12,401,207...12,405,022
JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO MGI:MGI:3589208 (MGI:MGI:5439239|PMID:22844247) RGD PMID:22844247 MGI:MGI:5439239 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:29,608,588...29,611,212
Ensembl chr18:29,608,588...29,611,212
JBrowse link
G E2f1 E2F transcription factor 1 ISO (PMID:15766563) RGD PMID:15766563 NCBI chr 3:150,062,895...150,073,721
Ensembl chr 3:150,047,826...150,073,721
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:24335285), (PMID:32354837) RGD PMID:24335285, PMID:32354837 NCBI chr14:83,412,843...83,455,694
Ensembl chr14:83,412,968...83,455,456
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO
ISS
(PMID:19029303), (PMID:21613615), (PMID:31358969)
(MGI:MGI:3037407|PMID:14976220), (MGI:MGI:5287957|PMID:21613615), (MGI:MGI:5559905|PMID:24394384), (MGI:MGI:5922838|PMID:27609837)
GO_REF:0000024
RGD
UniProt
PMID:14976220, PMID:19029303, PMID:21613615, PMID:24394384, PMID:27609837, PMID:31358969 GO_REF:0000024, MGI:MGI:3037407, MGI:MGI:5287957, MGI:MGI:5559905, MGI:MGI:5922838 NCBI chr12:2,461,502...2,502,432
Ensembl chr12:2,461,502...2,502,432
JBrowse link
G Fus FUS RNA binding protein ISO (PMID:27378374) RGD PMID:27378374 NCBI chr 1:199,412,805...199,426,705
Ensembl chr 1:199,412,834...199,426,702
JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO
ISS
IEA
(PMID:12358785)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:12358785 GO_REF:0000024, GO_REF:0000107 NCBI chr 2:56,884,181...56,912,964
Ensembl chr 2:56,887,987...56,910,238
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IDA RGD PMID:15192077 RGD:1357938 NCBI chr14:11,256,163...11,274,684
Ensembl chr14:11,256,268...11,274,578
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U ISO (PMID:17174306) RGD PMID:17174306 NCBI chr13:96,222,093...96,238,845
Ensembl chr13:96,225,912...96,238,572
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator ISO (PMID:25940091), (PMID:28673543) RGD PMID:25940091, PMID:28673543 NCBI chr10:43,435,738...43,501,186
Ensembl chr10:43,446,526...43,498,066
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 ISO MGI:MGI:2179724 (MGI:MGI:2158083|PMID:11741878) RGD PMID:11741878 MGI:MGI:2158083 NCBI chr13:47,785,157...47,871,684
Ensembl chr13:47,785,161...47,831,110
JBrowse link
G Meioc meiosis specific with coiled-coil domain ISO
IBA
(MGI:MGI:5770021|PMID:26742488)
PMID:21873635
RGD PMID:26742488, PMID:21873635 MGI:MGI:5770021, RGD:13792537 NCBI chr10:90,622,954...90,641,883
Ensembl chr10:90,622,992...90,642,151
JBrowse link
G Mtor mechanistic target of rapamycin kinase IMP RGD PMID:21073857 RGD:10040969 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Noct nocturnin ISO
ISS
(MGI:MGI:5308514|PMID:22073225)
GO_REF:0000024
RGD
UniProt
PMID:22073225 GO_REF:0000024, MGI:MGI:5308514 NCBI chr 2:140,286,661...140,306,869
Ensembl chr 2:140,286,661...140,306,869
JBrowse link
G Qk quaking IMP RGD PMID:16855020 RGD:10045995 NCBI chr 1:50,983,647...51,050,692 JBrowse link
G Rbm24 RNA binding motif protein 24 ISO (PMID:29104163) RGD PMID:29104163 NCBI chr17:18,671,037...18,682,876
Ensembl chr17:18,671,044...18,682,876
JBrowse link
G Rbm46 RNA binding motif protein 46 ISO (MGI:MGI:5644240|PMID:25397698) RGD PMID:25397698 MGI:MGI:5644240 NCBI chr 2:181,828,931...181,874,223
Ensembl chr 2:181,831,244...181,874,223
JBrowse link
G Slc11a1 solute carrier family 11 member 1 ISO
IEA
MGI:MGI:1857755 (MGI:MGI:85148|PMID:9009318)
GO_REF:0000107
RGD
Ensembl
PMID:9009318 GO_REF:0000107, MGI:MGI:85148 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706
JBrowse link
G Taf15 TATA-box binding protein associated factor 15 ISO (PMID:27378374) RGD PMID:27378374 NCBI chr10:70,689,863...70,721,892
Ensembl chr10:70,689,863...70,721,892
JBrowse link
G Tent5a terminal nucleotidyltransferase 5A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:92,935,474...92,942,267
Ensembl chr 8:92,937,739...92,942,076
JBrowse link
G Tent5b terminal nucleotidyltransferase 5B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:151,692,068...151,699,381
Ensembl chr 5:151,692,108...151,700,246
JBrowse link
G Tent5c terminal nucleotidyltransferase 5C ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:MGI:5926094|PMID:28931820)
(PMID:28931820)
UniProt
RGD
PMID:28931820, PMID:21873635 GO_REF:0000024, MGI:MGI:5926094, RGD:13792537 NCBI chr 2:202,797,766...202,816,562
Ensembl chr 2:202,798,198...202,816,562
JBrowse link
G Tent5d terminal nucleotidyltransferase 5D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:78,911,641...78,994,467
Ensembl chr  X:78,991,223...78,992,735
JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 ISO
ISS
(PMID:18794151)
GO_REF:0000024
RGD
UniProt
PMID:18794151 GO_REF:0000024 NCBI chr 5:144,178,248...144,221,318
Ensembl chr 5:144,179,023...144,221,263
JBrowse link
G Vegfa vascular endothelial growth factor A IDA RGD PMID:12881220 RGD:1580563 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vip vasoactive intestinal peptide ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:42,169,307...42,177,582
Ensembl chr 1:42,169,501...42,177,582
JBrowse link
G Ybx1 Y box binding protein 1 ISO
ISS
(PMID:31358969)
GO_REF:0000024
RGD
UniProt
PMID:31358969 GO_REF:0000024 NCBI chr 5:138,319,754...138,336,721
Ensembl chr 5:138,319,762...138,336,475
JBrowse link
G Ybx2 Y box binding protein 2 ISO MGI:MGI:3576937 (MGI:MGI:3696301|PMID:17035640) RGD PMID:17035640 MGI:MGI:3696301 NCBI chr10:56,546,689...56,552,339
Ensembl chr10:56,546,710...56,551,863
JBrowse link
mRNA transcription term browser