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ONTOLOGY REPORT - ANNOTATIONS


Term:rhodopsin mediated signaling pathway
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Accession:GO:0016056 term browser browse the term
Definition:The series of molecular signals generated as a consequence of excitation of rhodopsin by a photon and the events that convert the absorbed photons into a cellular response.
Synonyms:exact_synonym: rhodopsin mediated phototransduction;   rhodopsin mediated signalling pathway;   rhodopsin signaling
 alt_id: GO:0009586


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rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnat1 G protein subunit alpha transducin 1 IMP RGD PMID:11931744 RGD:1599009 NCBI chr 8:108,350,935...108,355,671 JBrowse link
G Grk1 G protein-coupled receptor kinase 1 TAS RGD PMID:9147475 RGD:729748 NCBI chr16:76,122,501...76,135,792 JBrowse link
G Opn4 opsin 4 acts_upstream_of_or_within ISO (MGI:4438311|PMID:19793992) RGD PMID:19793992 MGI:4438311 NCBI chr16:9,920,408...9,929,580 JBrowse link
G Pcp2 Purkinje cell protein 2 acts_upstream_of_or_within ISO MGI:3579782 (MGI:3817370|PMID:18768681) RGD PMID:18768681 MGI:3817370 NCBI chr12:1,681,659...1,683,899 JBrowse link
G Rho rhodopsin IDA RGD PMID:8814134 RGD:6893595 NCBI chr 4:148,975,597...148,988,693 JBrowse link
adaptation of rhodopsin mediated signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh11 retinol dehydrogenase 11 acts_upstream_of_or_within ISO MGI:3586379 (MGI:3584215|PMID:15790565) RGD PMID:15790565 MGI:3584215 NCBI chr 6:97,979,377...97,995,252 JBrowse link
G Rs1 retinoschisin 1 acts_upstream_of_or_within ISO MGI:3056058 (MGI:3055638|PMID:15326152) RGD PMID:15326152 MGI:3055638 NCBI chr  X:33,963,657...33,992,115 JBrowse link
regulation of rhodopsin mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 acts_upstream_of_or_within ISO MGI:3054784|MGI:3054793 (MGI:3054118|PMID:15365173), (MGI:3054134|PMID:15365178) RGD PMID:15365173 PMID:15365178 MGI:3054118 MGI:3054134 NCBI chr10:56,655,693...56,664,922 JBrowse link
G Grk1 G protein-coupled receptor kinase 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:15946941)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:15946941 GO_REF:0000024 GO_REF:0000107 NCBI chr16:76,122,501...76,135,792 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    signaling 7457
      signal transduction 6880
        phototransduction 29
          rhodopsin mediated signaling pathway 8
            adaptation of rhodopsin mediated signaling 2
            light-induced release of internally sequestered calcium ion 0
            phospholipase C-activating rhodopsin mediated signaling pathway 0
            regulation of rhodopsin mediated signaling pathway + 2
Path 2
Term Annotations click to browse term
  biological_process 19492
    response to stimulus 10355
      response to abiotic stimulus 1528
        response to radiation 540
          response to light stimulus 356
            detection of light stimulus 53
              detection of visible light 41
                phototransduction, visible light 10
                  rhodopsin mediated signaling pathway 8
                    adaptation of rhodopsin mediated signaling 2
                    light-induced release of internally sequestered calcium ion 0
                    phospholipase C-activating rhodopsin mediated signaling pathway 0
                    regulation of rhodopsin mediated signaling pathway + 2
paths to the root