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ONTOLOGY REPORT - ANNOTATIONS


Term:organic acid catabolic process
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Accession:GO:0016054 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of organic acids, any acidic compound containing carbon in covalent linkage.
Synonyms:exact_synonym: organic acid breakdown;   organic acid catabolism;   organic acid degradation


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10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1l1 aldehyde dehydrogenase 1 family, member L1 involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 4:123,516,553...123,564,067
Ensembl chr 4:123,516,788...123,557,501
JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family, member L2 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:26,375,866...26,425,838
Ensembl chr 7:26,375,866...26,425,108
JBrowse link
2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phyh phytanoyl-CoA 2-hydroxylase IDA RGD PMID:10588950 RGD:727286 NCBI chr17:77,287,580...77,304,482
Ensembl chr17:77,287,188...77,304,530
JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) RGD PMID:21998747 NCBI chr 1:261,291,742...261,319,743
Ensembl chr 1:261,291,870...261,318,984
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) RGD PMID:24895913 NCBI chr 2:251,634,368...251,766,009
Ensembl chr 2:251,634,431...251,766,014
JBrowse link
G Ddah2 dimethylarginine dimethylaminohydrolase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:5,049,260...5,052,573
Ensembl chr20:5,049,496...5,052,585
JBrowse link
G Fah fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2155424|MGI:2155425 (MGI:1929783|PMID:11209059)
Ensembl
RGD
PMID:11209059 GO_REF:0000107 MGI:1929783 NCBI chr 1:146,713,663...146,736,339
Ensembl chr 1:146,713,676...146,736,261
JBrowse link
G Nos1 nitric oxide synthase 1 involved_in IBA
IDA
PMID:21873635
PMID:1383204
GO_Central
BHF-UCL
PMID:21873635, PMID:1383204 RGD:13792537, RGD:8553334 NCBI chr12:44,214,949...44,405,530
Ensembl chr12:44,213,943...44,520,341
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO
IBA
IEA
(PMID:7504305)
(MGI:3807772|PMID:1383204)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:1383204 PMID:7504305, PMID:21873635 GO_REF:0000107 MGI:3807772, RGD:13792537 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO
IBA
IEA
(PMID:1378832), (PMID:7488039)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:1378832 PMID:7488039, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:204,562,289...204,582,070
Ensembl chr 1:204,562,289...204,582,070
JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:15753084, PMID:21873635 RGD:8693655, RGD:13792537 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Arg2 arginase 2 involved_in TAS
IBA
IDA
PMID:21873635 RGD
GO_Central
PMID:14871882, PMID:21873635, PMID:15753084 RGD:1358311, RGD:13792537, RGD:8693655 NCBI chr 6:102,311,097...102,338,406
Ensembl chr 6:102,311,116...102,338,520
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:204,562,289...204,582,070
Ensembl chr 1:204,562,289...204,582,070
JBrowse link
arginine deiminase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Padi3 peptidyl arginine deiminase 3 NAS RGD PMID:9192727 RGD:69926 NCBI chr 5:159,309,000...159,336,429
Ensembl chr 5:159,309,000...159,336,429
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 involved_in IBA
IDA
ISO
PMID:21873635
PMID:12753071
(PMID:19839645)
RGD PMID:19839645, PMID:21873635, PMID:12753071 RGD:13792537, RGD:1299508 NCBI chr 1:225,309,737...225,329,743
Ensembl chr 1:225,309,246...225,329,770
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in IBA
ISO
PMID:21873635
(PMID:9163533)
RGD PMID:9163533, PMID:21873635 RGD:13792537 NCBI chr20:48,739,812...48,758,958
Ensembl chr20:48,739,639...48,758,905
JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO (PMID:2241899) RGD PMID:2241899 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 involved_in IBA
ISO
PMID:21873635
(PMID:2567216)
RGD PMID:2567216, PMID:21873635 RGD:13792537 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 IDA RGD PMID:2768248 RGD:1599052 NCBI chr 6:108,146,552...108,167,185
Ensembl chr 6:108,146,582...108,167,185
JBrowse link
bile acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1, member D1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:65,110,706...65,143,930
Ensembl chr 4:65,110,746...65,143,941
JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auh AU RNA binding methylglutaconyl-CoA hydratase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:12,310,178...12,405,224
Ensembl chr17:12,310,214...12,405,205
JBrowse link
G Bcat1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) RGD PMID:14755340 MGI:3027291 NCBI chr 4:179,259,305...179,340,021
Ensembl chr 4:179,259,308...179,339,795
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within IDA
ISO
MGI:3028726 (MGI:3027291|PMID:14755340) RGD PMID:14755340, PMID:11733007 MGI:3027291, RGD:1582175 NCBI chr 1:101,553,900...101,572,103
Ensembl chr 1:101,554,642...101,572,080
JBrowse link
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha involved_in TAS
ISO
IEA
IBA
ISS
(PMID:7883996)
GO_REF:0000002
PMID:21873635
GO_REF:0000024
RGD
InterPro
HGNC-UCL
PMID:7883996, PMID:2822716, PMID:21873635 GO_REF:0000002 GO_REF:0000024, RGD:631719, RGD:13792537 NCBI chr 1:82,423,291...82,452,094
Ensembl chr 1:82,423,277...82,452,281
JBrowse link
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta involved_in ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000107
PMID:21873635
(PMID:2022752)
HGNC-UCL
Ensembl
RGD
PMID:2022752, PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 8:91,464,229...91,656,134
Ensembl chr 8:91,464,229...91,656,134
JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase involved_in TAS
IDA
PMID:1377677 RGD
HGNC-UCL
PMID:11562470, PMID:1377677 RGD:68918, RGD:68712 NCBI chr 1:199,351,628...199,356,299
Ensembl chr 1:199,351,628...199,356,881
JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:82,604,369...82,702,429
Ensembl chr 4:82,604,373...82,702,429
JBrowse link
G Hibch 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:53,446,185...53,526,727
Ensembl chr 9:53,446,194...53,526,728
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) RGD PMID:7640268 NCBI chr 3:110,669,355...110,689,789
Ensembl chr 3:110,669,312...110,690,173
JBrowse link
G Slc25a44 solute carrier family 25, member 44 involved_in ISO (PMID:31435015)
(MGI:6359503|PMID:31435015)
RGD PMID:31435015 MGI:6359503 NCBI chr 2:187,772,013...187,786,829
Ensembl chr 2:187,774,062...187,786,731
JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acads acyl-CoA dehydrogenase short chain involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:3968063, PMID:21873635 RGD:2317678, RGD:13792537 NCBI chr12:47,254,503...47,263,747
Ensembl chr12:47,254,484...47,263,747
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6450264|PMID:18799520) RGD PMID:18799520 MGI:6450264 NCBI chr19:46,455,745...46,470,070
Ensembl chr19:46,455,761...46,482,050
JBrowse link
carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pon1 paraoxonase 1 involved_in ISO (PMID:7638166) RGD PMID:7638166 NCBI chr 4:30,249,749...30,276,297
Ensembl chr 4:30,249,742...30,276,372
JBrowse link
G Pon3 paraoxonase 3 involved_in ISO (PMID:15772423) RGD PMID:15772423 NCBI chr 4:30,311,981...30,338,679
Ensembl chr 4:30,311,982...30,338,679
JBrowse link
cellular amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:100,811,727...100,836,901
Ensembl chr 1:100,830,064...100,836,677
JBrowse link
G Lao1 L-amino acid oxidase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:138,011,760...138,021,653
Ensembl chr 5:138,011,760...138,021,644
JBrowse link
G Pcca propionyl-CoA carboxylase subunit alpha TAS RGD PMID:2745462 RGD:633579 NCBI chr15:108,960,509...109,306,879
Ensembl chr15:108,960,562...109,306,603
JBrowse link
G Pccb propionyl-CoA carboxylase subunit beta TAS RGD PMID:3464942 RGD:633580 NCBI chr 8:109,368,887...109,418,871
Ensembl chr 8:109,368,624...109,418,872
JBrowse link
G RGD1308564 similar to L-amino acid oxidase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:43,715,911...43,733,329
Ensembl chr10:43,715,907...43,733,320
JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in IBA
ISO
IEA
PMID:21873635
(MGI:5442503|PMID:20603179)
GO_REF:0000107
(PMID:16616139), (PMID:20603179)
RGD
Ensembl
PMID:16616139 PMID:20603179, PMID:21873635 GO_REF:0000107 MGI:5442503, RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
G Ddo D-aspartate oxidase involved_in IBA
ISO
PMID:21873635
(MGI:5442503|PMID:20603179)
(PMID:20603179)
RGD PMID:20603179, PMID:21873635 MGI:5442503, RGD:13792537 NCBI chr20:48,739,812...48,758,958
Ensembl chr20:48,739,639...48,758,905
JBrowse link
D-gluconate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idnk Idnk, gluconokinase involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr17:6,885,323...6,892,603
Ensembl chr17:6,885,221...6,892,497
JBrowse link
G Pgd phosphogluconate dehydrogenase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:165,966,128...165,982,327 JBrowse link
D-glucuronate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
IMP
ISO
PMID:22820017
(MGI:3588122|PMID:15769935)
RGD PMID:15769935, PMID:22820017 MGI:3588122, RGD:13825440 NCBI chr 5:135,482,068...135,498,693
Ensembl chr 5:135,482,068...135,498,822
JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:18544534)
Ensembl
RGD
PMID:18544534, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 involved_in ISO (PMID:16141203) RGD PMID:16141203 NCBI chr 6:107,517,668...107,522,952
Ensembl chr 6:107,517,668...107,522,952
JBrowse link
G Acot8 acyl-CoA thioesterase 8 involved_in IEA
ISO
GO_REF:0000107
(PMID:16141203)
Ensembl
RGD
PMID:16141203 GO_REF:0000107 NCBI chr 3:161,260,837...161,272,495
Ensembl chr 3:161,259,735...161,272,460
JBrowse link
fatty acid alpha-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hacl1 2-hydroxyacyl-CoA lyase 1 involved_in IDA
ISO
IBA
PMID:10468558
(MGI:6105330|PMID:28629946)
(PMID:10468558), (PMID:15644336), (PMID:21708296), (PMID:28289220)
PMID:21873635
RGD PMID:10468558 PMID:15644336 PMID:21708296 PMID:28289220 PMID:28629946, PMID:10468558, PMID:21873635 MGI:6105330, RGD:708588, RGD:13792537 NCBI chr16:7,720,047...7,758,119
Ensembl chr16:7,714,465...7,758,189
JBrowse link
G Hao1 hydroxyacid oxidase 1 involved_in IBA
ISO
PMID:21873635
(PMID:18215067)
RGD PMID:18215067, PMID:21873635 RGD:13792537 NCBI chr 3:127,444,900...127,500,709
Ensembl chr 3:127,444,902...127,500,709
JBrowse link
G Ilvbl ilvB acetolactate synthase like involved_in ISO (PMID:28289220) RGD PMID:28289220 NCBI chr 7:14,044,586...14,054,639
Ensembl chr 7:14,044,586...14,054,639
JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO MGI:2384515 (MGI:2670243|PMID:12897163) RGD PMID:12897163 MGI:2670243 NCBI chr14:108,394,299...108,411,994
Ensembl chr14:108,394,303...108,412,823
JBrowse link
G Phyh phytanoyl-CoA 2-hydroxylase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
(MGI:1097297|PMID:9326939), (MGI:3052413|PMID:12915479)
(PMID:16186124), (PMID:9326939)
PMID:21873635
RGD PMID:9326939 PMID:12915479 PMID:16186124, PMID:10588950, PMID:21873635 MGI:1097297 MGI:3052413, RGD:727286, RGD:13792537 NCBI chr17:77,287,580...77,304,482
Ensembl chr17:77,287,188...77,304,530
JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:10198260)
Ensembl
RGD
PMID:10198260 GO_REF:0000107 NCBI chr 3:119,014,620...119,052,531
Ensembl chr 3:119,014,620...119,052,531
JBrowse link
fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5315378|PMID:10196381)
UniProtKB:P34230|UniProtKB:P41909 (PMID:17542813), (PMID:18757502), (PMID:21145416), (PMID:23671276), (PMID:9425230)
GO_REF:0000024
RGD
UniProt
PMID:9425230 PMID:10196381 PMID:17542813 PMID:18757502 PMID:21145416 PMID:23671276, PMID:21873635 GO_REF:0000024 MGI:5315378, RGD:13792537 NCBI chr  X:157,073,860...157,095,652
Ensembl chr  X:157,072,736...157,095,274
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in IBA
ISO
IEA
PMID:21873635
(MGI:5315378|PMID:10196381)
GO_REF:0000107
UniProtKB:P41909 (PMID:21145416)
RGD
Ensembl
PMID:10196381 PMID:21145416, PMID:21873635 GO_REF:0000107 MGI:5315378, RGD:13792537 NCBI chr 7:132,294,564...132,343,169
Ensembl chr 7:132,294,562...132,343,169
JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in IBA
ISO
PMID:21873635
UniProtKB:P33897 (PMID:24333844), (PMID:9425230)
RGD PMID:9425230 PMID:24333844, PMID:21873635 RGD:13792537 NCBI chr 2:225,335,708...225,389,120
Ensembl chr 2:225,335,718...225,389,120
JBrowse link
G Abcd4 ATP binding cassette subfamily D member 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:108,315,026...108,329,550
Ensembl chr 6:108,315,035...108,329,464
JBrowse link
G Acaa1a acetyl-CoA acyltransferase 1A involved_in IBA
IGI
ISO
IDA
PMID:21873635
PMID:2882519
(PMID:2365812), (PMID:2882519)
PMID:9325339
RGD PMID:2365812 PMID:2882519, PMID:21873635, PMID:2882519, PMID:9325339 RGD:13792537, RGD:8554082, RGD:21201257 NCBI chr 8:128,027,880...128,036,471
Ensembl chr 8:128,027,958...128,036,236
JBrowse link
G Acaa1b acetyl-Coenzyme A acyltransferase 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:127,836,235...127,845,296 JBrowse link
G Acaa2 acetyl-CoA acyltransferase 2 involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:11879205, PMID:21873635 GO_REF:0000041, RGD:2317624, RGD:13792537 NCBI chr18:70,733,872...70,762,395
Ensembl chr18:70,733,872...70,762,395
JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in TAS
IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:2393404)
UniProt
RGD
PMID:2393404, PMID:15358373, PMID:21873635 GO_REF:0000024, RGD:1358266, RGD:13792537 NCBI chr 2:260,124,418...260,148,589
Ensembl chr 2:260,124,418...260,148,589
JBrowse link
G Acads acyl-CoA dehydrogenase short chain TAS RGD PMID:11812788 RGD:632244 NCBI chr12:47,254,503...47,263,747
Ensembl chr12:47,254,484...47,263,747
JBrowse link
G Acadsb acyl-CoA dehydrogenase, short/branched chain TAS RGD PMID:12855692 RGD:1358267 NCBI chr 1:201,981,362...202,022,771
Ensembl chr 1:201,981,357...202,021,008
JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain IDA RGD PMID:8034667 RGD:631729 NCBI chr10:56,619,321...56,624,468
Ensembl chr10:56,619,303...56,624,526
JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 8:58,166,990...58,195,884
Ensembl chr 8:58,166,990...58,195,884
JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:47,972,399...47,992,654
Ensembl chr 1:47,972,399...47,992,653
JBrowse link
G Acat2l1 acetyl-CoA acetyltransferase 2-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:48,008,574...48,025,730
Ensembl chr 1:47,996,521...48,026,268
JBrowse link
G Acox1 acyl-CoA oxidase 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:104,724,534...104,748,003
Ensembl chr10:104,722,958...104,748,050
JBrowse link
G Acox2 acyl-CoA oxidase 2 IDA RGD PMID:1400324, PMID:8654595 RGD:2299949, RGD:2299971 NCBI chr15:18,449,304...18,481,472
Ensembl chr15:18,451,144...18,481,470
JBrowse link
G Acox3 acyl-CoA oxidase 3, pristanoyl involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:80,313,202...80,358,115
Ensembl chr14:80,314,431...80,355,420
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2388007 (MGI:2387247|PMID:12151381)
UniProt
RGD
PMID:12151381 GO_REF:0000024 MGI:2387247 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
G Auh AU RNA binding methylglutaconyl-CoA hydratase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:12,310,178...12,405,224
Ensembl chr17:12,310,214...12,405,205
JBrowse link
G Bdh2 3-hydroxybutyrate dehydrogenase 2 involved_in ISO
IEA
(PMID:16380372)
GO_REF:0000107
RGD
Ensembl
PMID:16380372 GO_REF:0000107 NCBI chr 2:240,461,505...240,482,149
Ensembl chr 2:240,461,505...240,482,145
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A involved_in IEP
IEA
GO_REF:0000041 UniProt PMID:31901136, PMID:31953200 GO_REF:0000041, RGD:25823178, RGD:25823179 NCBI chr 1:218,568,157...218,629,679
Ensembl chr 1:218,569,510...218,629,678
JBrowse link
G Cpt1b carnitine palmitoyltransferase 1B involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:130,395,211...130,404,731
Ensembl chr 7:130,395,194...130,405,347
JBrowse link
G Cpt1c carnitine palmitoyltransferase 1c involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:100,955,094...100,970,579
Ensembl chr 1:100,955,095...100,969,560
JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in TAS
IEA
ISS
IBA
ISO
IEP
GO_REF:0000107
GO_REF:0000024
PMID:21873635
(PMID:20538056)
GO_REF:0000041
Ensembl
UniProt
RGD
PMID:20538056, PMID:16781677, PMID:21873635, PMID:10380116, PMID:10796071 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107, RGD:1600744, RGD:13792537, RGD:21410186, RGD:2326088 NCBI chr 5:127,505,646...127,523,016
Ensembl chr 5:127,505,614...127,523,089
JBrowse link
G Crot carnitine O-octanoyltransferase involved_in IEA
ISO
GO_REF:0000041
GO_REF:0000107
(PMID:21619872)
UniProt
Ensembl
RGD
PMID:21619872 GO_REF:0000041 GO_REF:0000107 NCBI chr 4:22,079,837...22,116,265
Ensembl chr 4:22,081,604...22,116,265
JBrowse link
G Decr1 2,4-dienoyl-CoA reductase 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:15531764)
Ensembl
UniProt
RGD
PMID:15531764 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:29,573,893...29,601,731
Ensembl chr 5:29,573,898...29,601,748
JBrowse link
G Ech1 enoyl-CoA hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:87,009,798...87,015,996
Ensembl chr 1:87,009,730...87,016,005
JBrowse link
G Echdc1 ethylmalonyl-CoA decarboxylase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:30,874,410...30,921,117
Ensembl chr 1:30,874,418...30,917,882
JBrowse link
G Echdc2 enoyl CoA hydratase domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:127,770,570...127,789,568
Ensembl chr 5:127,770,570...127,789,567
JBrowse link
G Echs1 enoyl-CoA hydratase, short chain 1 involved_in TAS
IBA
IEA
ISO
ISS
IMP
PMID:21873635
GO_REF:0000041
(PMID:26251176)
GO_REF:0000024
UniProt
RGD
PMID:26251176, PMID:2806264, PMID:21873635, PMID:12379132 GO_REF:0000024 GO_REF:0000041, RGD:68828, RGD:13792537, RGD:2317616 NCBI chr 1:212,570,213...212,579,040
Ensembl chr 1:212,570,195...212,579,057
Ensembl chr 1:212,570,195...212,579,057
JBrowse link
G Eci1 enoyl-CoA delta isomerase 1 acts_upstream_of_or_within
involved_in
TAS
ISO
IEA
IDA
IBA
MGI:2180887 (MGI:2180251|PMID:11916962)
GO_REF:0000107
PMID:11781327
PMID:21873635
GO_REF:0000041
RGD
Ensembl
UniProt
PMID:11916962, PMID:1958319, PMID:11781327, PMID:21873635 GO_REF:0000041 GO_REF:0000107 MGI:2180251, RGD:61567, RGD:2306199, RGD:13792537 NCBI chr10:13,797,573...13,810,918
Ensembl chr10:13,797,562...13,810,913
JBrowse link
G Eci2 enoyl-CoA delta isomerase 2 involved_in IDA
IEA
GO_REF:0000041 UniProt PMID:11781327 GO_REF:0000041, RGD:2306199 NCBI chr17:30,556,926...30,573,324
Ensembl chr17:30,556,884...30,639,040
JBrowse link
G Ehhadh enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase involved_in
acts_upstream_of_or_within
IDA
ISO
IBA
IEA
PMID:12106015
MGI:1857810 (MGI:3711634|PMID:17442273)
PMID:11781327
PMID:21873635
GO_REF:0000041
(PMID:15060085)
RGD
UniProt
PMID:15060085 PMID:17442273, PMID:12106015, PMID:11781327, PMID:21873635 GO_REF:0000041 MGI:3711634, RGD:21201263, RGD:2306199, RGD:13792537 NCBI chr11:82,945,104...82,978,364
Ensembl chr11:82,945,104...82,978,364
JBrowse link
G Fabp3 fatty acid binding protein 3 NAS RGD PMID:3036869 RGD:728828 NCBI chr 5:148,528,854...148,535,597
Ensembl chr 5:148,528,725...148,535,565
JBrowse link
G Hadh hydroxyacyl-CoA dehydrogenase involved_in IMP
ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000041
(PMID:2817332)
(PMID:11489939)
UniProt
RGD
PMID:2817332 PMID:11489939, PMID:17491019 GO_REF:0000024 GO_REF:0000041, RGD:2302227 NCBI chr 2:236,353,445...236,395,067
Ensembl chr 2:236,353,445...236,395,067
JBrowse link
G Hadha hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
IBA
MGI:2137697 (MGI:2135592|PMID:11390422)
GO_REF:0000041
PMID:21873635
RGD
UniProt
PMID:11390422, PMID:1730633, PMID:21873635 GO_REF:0000041 MGI:2135592, RGD:1600572, RGD:13792537 NCBI chr 6:27,589,840...27,628,921
Ensembl chr 6:27,589,657...27,629,175
JBrowse link
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:1730633, PMID:21873635 GO_REF:0000041, RGD:1600572, RGD:13792537 NCBI chr 6:27,555,408...27,589,539
Ensembl chr 6:27,555,412...27,582,995
JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:12917011)
GO_REF:0000041
UniProt
Ensembl
RGD
PMID:12917011 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr  X:21,696,796...21,699,241
Ensembl chr  X:21,696,772...21,699,241
JBrowse link
G Hsd17b4 hydroxysteroid (17-beta) dehydrogenase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
ISS
GO_REF:0000041
MGI:2385822 (MGI:3711634|PMID:17442273)
PMID:21873635
(PMID:10400999), (PMID:10706581), (PMID:15060085), (PMID:9482850)
GO_REF:0000024
UniProt
RGD
PMID:9482850 PMID:10400999 PMID:10706581 PMID:15060085 PMID:17442273, PMID:21873635 GO_REF:0000024 GO_REF:0000041 MGI:3711634, RGD:13792537 NCBI chr18:44,810,462...44,897,677
Ensembl chr18:44,810,388...44,897,640
JBrowse link
G Lep leptin acts_upstream_of_or_within ISO MGI:2651874 (MGI:5444071|PMID:22958918) RGD PMID:22958918 MGI:5444071 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Mtln mitoregulin involved_in ISO (PMID:32243843) RGD PMID:32243843 NCBI chr 3:120,372,665...120,373,523 JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in ISO (PMID:10528859), (PMID:9765053) RGD PMID:9765053 PMID:10528859 NCBI chr 2:98,251,756...98,269,185
Ensembl chr 2:98,252,925...98,269,184
JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO MGI:2154454|MGI:2176228|MGI:2384516 (MGI:1096198|PMID:9288097), (MGI:3711634|PMID:17442273) RGD PMID:9288097 PMID:17442273 MGI:1096198 MGI:3711634 NCBI chr 4:156,983,914...157,009,675
Ensembl chr 4:156,983,915...157,009,674
Ensembl chr 4:156,983,915...157,009,674
JBrowse link
G Pex7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within ISO MGI:3052739 (MGI:3052413|PMID:12915479) RGD PMID:12915479 MGI:3052413 NCBI chr 1:15,311,768...15,374,702
Ensembl chr 1:15,311,770...15,374,850
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta acts_upstream_of_or_within ISO (PMID:14676330) RGD PMID:14676330 NCBI chr20:7,818,289...7,883,482
Ensembl chr20:7,818,289...7,885,333
JBrowse link
G Scp2 sterol carrier protein 2 involved_in IDA PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chr 5:127,647,934...127,735,703
Ensembl chr 5:127,620,274...127,735,739
JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO MGI:104663 (MGI:5444071|PMID:22958918) RGD PMID:22958918 MGI:5444071 NCBI chr 5:150,684,891...150,703,846
Ensembl chr 5:150,684,133...150,704,117
JBrowse link
G Slc25a17 solute carrier family 25 member 17 involved_in ISO UniProtKB:Q06497 (PMID:12445829) RGD PMID:12445829 NCBI chr 7:122,539,293...122,581,777
Ensembl chr 7:122,539,293...122,581,777
JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO
IEA
(PMID:10198260)
GO_REF:0000107
RGD
Ensembl
PMID:10198260 GO_REF:0000107 NCBI chr 3:119,014,620...119,052,531
Ensembl chr 3:119,014,620...119,052,531
JBrowse link
fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad11 acyl-CoA dehydrogenase family, member 11 involved_in ISO (PMID:21237683) RGD PMID:21237683 NCBI chr 8:112,594,758...112,676,275
Ensembl chr 8:112,594,691...112,676,280
JBrowse link
G Acadl acyl-CoA dehydrogenase, long chain involved_in IDA
ISO
IBA
(MGI:3526480|PMID:15639194)
PMID:21873635
RGD PMID:15639194, PMID:3968063, PMID:21873635 MGI:3526480, RGD:2317678, RGD:13792537 NCBI chr 9:73,833,368...73,871,857
Ensembl chr 9:73,833,388...73,871,888
JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in IDA
IEA
ISO
GO_REF:0000107
(MGI:4412440|PMID:18459129)
(PMID:16972171), (PMID:1902818), (PMID:19224950), (PMID:25416781), (PMID:3597357)
Ensembl
RGD
PMID:1902818 PMID:3597357 PMID:16972171 PMID:18459129 PMID:19224950 PMID:25416781, PMID:3968063 GO_REF:0000107 MGI:4412440, RGD:2317678 NCBI chr 2:260,124,418...260,148,589
Ensembl chr 2:260,124,418...260,148,589
JBrowse link
G Acads acyl-CoA dehydrogenase short chain involved_in IDA
IEA
ISO
GO_REF:0000107
(PMID:3597357)
Ensembl
RGD
PMID:3597357, PMID:3968063 GO_REF:0000107, RGD:2317678 NCBI chr12:47,254,503...47,263,747
Ensembl chr12:47,254,484...47,263,747
JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3526480|PMID:15639194)
GO_REF:0000024
(PMID:7668252), (PMID:9599005)
Ensembl
RGD
UniProt
PMID:7668252 PMID:9599005 PMID:15639194 GO_REF:0000024 GO_REF:0000107 MGI:3526480 NCBI chr10:56,619,321...56,624,468
Ensembl chr10:56,619,303...56,624,526
JBrowse link
G Etfa electron transfer flavoprotein subunit alpha involved_in ISO
ISS
IBA
(PMID:25416781)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:25416781, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 8:60,028,786...60,086,352
Ensembl chr 8:60,028,789...60,086,403
JBrowse link
G Etfb electron transfer flavoprotein subunit beta involved_in ISO
ISS
(PMID:25416781)
(MGI:5700285|PMID:25023281)
GO_REF:0000024
RGD
UniProt
PMID:25023281 PMID:25416781 GO_REF:0000024 MGI:5700285 NCBI chr 1:98,472,776...98,486,940
Ensembl chr 1:98,472,745...98,486,976
JBrowse link
G Etfdh electron transfer flavoprotein dehydrogenase involved_in IEA
ISO
GO_REF:0000107
(PMID:17412732)
Ensembl
RGD
PMID:17412732 GO_REF:0000107 NCBI chr 2:178,367,547...178,389,641
Ensembl chr 2:178,367,549...178,389,608
JBrowse link
G Gcdh glutaryl-CoA dehydrogenase involved_in ISO
IBA
(PMID:25416781)
PMID:21873635
RGD PMID:25416781, PMID:21873635 RGD:13792537 NCBI chr19:26,000,497...26,006,970
Ensembl chr19:26,000,497...26,006,970
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO
IC
(PMID:3597357)
PMID:6401713
RGD PMID:3597357, PMID:6401713 RGD:8554099 NCBI chr 3:110,669,355...110,689,789
Ensembl chr 3:110,669,312...110,690,173
JBrowse link
fatty acid beta-oxidation using acyl-CoA oxidase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acox1 acyl-CoA oxidase 1 involved_in IDA
ISO
IEA
IBA
(PMID:18536048)
GO_REF:0000041
PMID:21873635
RGD
UniProt
PMID:18536048, PMID:1400324, PMID:21873635 GO_REF:0000041, RGD:2299949, RGD:13792537 NCBI chr10:104,724,534...104,748,003
Ensembl chr10:104,722,958...104,748,050
JBrowse link
G Acox2 acyl-CoA oxidase 2 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:27884763)
Ensembl
RGD
PMID:27884763, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr15:18,449,304...18,481,472
Ensembl chr15:18,451,144...18,481,470
JBrowse link
G Acox3 acyl-CoA oxidase 3, pristanoyl involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:1400324, PMID:21873635, PMID:8654595, PMID:8026493 GO_REF:0000041, RGD:2299949, RGD:13792537, RGD:2299971, RGD:2299969 NCBI chr14:80,313,202...80,358,115
Ensembl chr14:80,314,431...80,355,420
JBrowse link
G Acoxl acyl-CoA oxidase-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:120,414,311...120,724,809
Ensembl chr 3:120,414,291...120,726,336
JBrowse link
G Crat carnitine O-acetyltransferase involved_in ISO
IEA
ISS
(PMID:23485643)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:23485643 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:8,967,984...8,981,959
Ensembl chr 3:8,968,417...8,981,362
JBrowse link
fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase, long chain acts_upstream_of_or_within ISO (MGI:5660099|PMID:21151927) RGD PMID:21151927 MGI:5660099 NCBI chr 9:73,833,368...73,871,857
Ensembl chr 9:73,833,388...73,871,888
JBrowse link
G Acadvl acyl-CoA dehydrogenase, very long chain acts_upstream_of_or_within ISO MGI:3606688 (MGI:5660099|PMID:21151927) RGD PMID:21151927 MGI:5660099 NCBI chr10:56,619,321...56,624,468
Ensembl chr10:56,619,303...56,624,526
JBrowse link
G Acot7 acyl-CoA thioesterase 7 acts_upstream_of_or_within ISO (MGI:2158988|PMID:11834298) RGD PMID:11834298 MGI:2158988 NCBI chr 5:169,357,582...169,450,215
Ensembl chr 5:169,357,517...169,450,219
JBrowse link
G Acot8 acyl-CoA thioesterase 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:161,260,837...161,272,495
Ensembl chr 3:161,259,735...161,272,460
JBrowse link
G Acox1 acyl-CoA oxidase 1 involved_in ISO (PMID:32169171) RGD PMID:32169171 NCBI chr10:104,724,534...104,748,003
Ensembl chr10:104,722,958...104,748,050
JBrowse link
G Eci2 enoyl-CoA delta isomerase 2 involved_in ISO (PMID:10419495) RGD PMID:10419495 NCBI chr17:30,556,926...30,573,324
Ensembl chr17:30,556,884...30,639,040
JBrowse link
G Faah fatty acid amide hydrolase involved_in IDA
IBA
ISO
PMID:21873635
PMID:9122178
(PMID:9122178)
PMID:17649977
RGD PMID:9122178, PMID:12734197, PMID:21873635, PMID:9122178, PMID:17649977 RGD:1625736, RGD:13792537, RGD:8554689, RGD:14397564 NCBI chr 5:134,852,899...134,872,095
Ensembl chr 5:134,852,875...134,871,775
JBrowse link
G Faahl fatty-acid amide hydrolase-like involved_in IDA
IBA
PMID:17649977
PMID:21873635
PMID:9122178
UniProt
GO_Central
PMID:17649977, PMID:21873635, PMID:9122178 RGD:14397564, RGD:13792537, RGD:8554689 NCBI chr 5:134,330,204...134,349,400
Ensembl chr 5:134,331,929...134,348,995
JBrowse link
G Lep leptin IDA RGD PMID:12058043 RGD:625499 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Lpin1 lipin 1 involved_in IBA
ISO
PMID:21873635
(MGI:3770090|PMID:16950137)
RGD PMID:16950137, PMID:21873635 MGI:3770090, RGD:13792537 NCBI chr 6:41,796,214...41,905,149
Ensembl chr 6:41,799,749...41,870,046
JBrowse link
G Lpin2 lipin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:119,517,101...119,591,533
Ensembl chr 9:119,517,101...119,591,533
JBrowse link
G Lpin3 lipin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:156,874,805...156,899,601
Ensembl chr 3:156,886,454...156,899,436
JBrowse link
G Pcca propionyl-CoA carboxylase subunit alpha TAS RGD PMID:2745462 RGD:633579 NCBI chr15:108,960,509...109,306,879
Ensembl chr15:108,960,562...109,306,603
JBrowse link
G Pccb propionyl-CoA carboxylase subunit beta TAS RGD PMID:3464942 RGD:633580 NCBI chr 8:109,368,887...109,418,871
Ensembl chr 8:109,368,624...109,418,872
JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) RGD PMID:12764149 NCBI chr 8:96,564,877...96,614,386
Ensembl chr 8:96,564,877...96,614,348
JBrowse link
G Pm20d2 peptidase M20 domain containing 2 NOT|involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:48,416,005...48,437,054
Ensembl chr 5:48,420,302...48,436,531
JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in IBA
IC
ISO
PMID:21873635
PMID:10447691
(PMID:11561735)
RGD PMID:11561735, PMID:21873635, PMID:10447691 RGD:13792537, RGD:631980 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family, member A1 involved_in
acts_upstream_of_or_within
ISS
ISO
TAS
IEA
GO_REF:0000024
MGI:2180159 (MGI:2151301|PMID:11544478), (MGI:3050939|PMID:15262267)
PMID:7814412
(PMID:15037717), (PMID:9683595)
GO_REF:0000041
UniProt
RGD
PMID:9683595 PMID:11544478 PMID:15037717 PMID:15262267, PMID:7814412 GO_REF:0000024 GO_REF:0000041 MGI:2151301 MGI:3050939, RGD:632258 NCBI chr17:42,133,076...42,159,413
Ensembl chr17:42,133,076...42,159,413
JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glud1 glutamate dehydrogenase 1 involved_in TAS
IBA
ISO
PMID:21873635
(PMID:11032875), (PMID:6121377)
RGD PMID:6121377 PMID:11032875, PMID:12684230, PMID:21873635 RGD:1601355, RGD:13792537 NCBI chr16:10,661,486...10,695,557
Ensembl chr16:10,662,021...10,695,557
JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within IDA
ISO
(MGI:53641|PMID:4193185) RGD PMID:4193185, PMID:16489927 MGI:53641, RGD:13504861 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within IDA
ISO
(MGI:53641|PMID:4193185) RGD PMID:4193185, PMID:16489927 MGI:53641, RGD:13504861 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) RGD PMID:4193185 MGI:53641 NCBI chr 1:263,246,248...263,269,762
Ensembl chr 1:263,246,248...263,269,762
JBrowse link
G Got2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) RGD PMID:4193185 MGI:53641 NCBI chr19:9,587,637...9,613,323
Ensembl chr19:9,587,653...9,613,340
JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase, iron containing, 1 involved_in ISO
ISS
(PMID:16435184)
GO_REF:0000024
RGD
UniProt
PMID:16435184 GO_REF:0000024 NCBI chr 5:9,403,194...9,429,783
Ensembl chr 5:9,403,196...9,429,859
JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 IDA RGD PMID:8999827 RGD:1625237 NCBI chr17:89,171,576...89,234,770
Ensembl chr17:89,171,250...89,238,040
JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in
acts_upstream_of_or_within
TAS
ISO
IEA
IBA
ISS
(MGI:5320252|PMID:22228304)
MGI:3514104 (MGI:3623875|PMID:16641247)
GO_REF:0000107
PMID:21873635
(PMID:22049910)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16641247 PMID:22049910 PMID:22228304, PMID:1918000, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3623875 MGI:5320252, RGD:728510, RGD:13792537 NCBI chr 9:54,212,622...54,284,879
Ensembl chr 9:54,212,767...54,284,872
JBrowse link
G Gls2 glutaminase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:2,605,679...2,621,853
Ensembl chr 7:2,605,719...2,621,852
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase IDA RGD PMID:8463258 RGD:633710 NCBI chr14:33,580,541...33,614,919
Ensembl chr14:33,580,541...33,614,919
JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gldc glycine decarboxylase involved_in ISO (PMID:28244183) RGD PMID:28244183 NCBI chr 1:248,295,140...248,377,122
Ensembl chr 1:248,297,331...248,377,093
JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07007134.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:282,557,426...282,557,923 JBrowse link
G AABR07067762.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 9:61,738,471...61,739,134 JBrowse link
G Amt aminomethyltransferase involved_in ISO
IBA
(PMID:16051266)
PMID:21873635
RGD PMID:16051266, PMID:21873635 RGD:13792537 NCBI chr 8:117,068,388...117,078,633
Ensembl chr 8:117,068,582...117,077,913
JBrowse link
G Gcsh glycine cleavage system protein H involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:6402507, PMID:21873635 RGD:1598699, RGD:13792537 NCBI chr19:49,522,054...49,532,811
Ensembl chr19:49,522,054...49,532,811
JBrowse link
G Gldc glycine decarboxylase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:6778858, PMID:21873635 RGD:1642728, RGD:13792537 NCBI chr 1:248,295,140...248,377,122
Ensembl chr 1:248,297,331...248,377,093
JBrowse link
G RGD1563099 similar to Gcsh protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:282,557,429...282,557,979 JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in ISO (PMID:18215067) RGD PMID:18215067 NCBI chr 3:127,444,900...127,500,709
Ensembl chr 3:127,444,902...127,500,709
JBrowse link
glyoxylate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:22198249) RGD PMID:22198249 NCBI chr 9:100,281,339...100,291,292
Ensembl chr 9:100,281,339...100,291,291
JBrowse link
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in IBA
ISO
PMID:21873635
(PMID:20018850)
RGD PMID:20018850, PMID:21873635 RGD:13792537 NCBI chr 2:60,337,667...60,379,144
Ensembl chr 2:60,337,667...60,379,420
JBrowse link
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:20797690) RGD PMID:20797690 NCBI chr 1:261,291,742...261,319,743
Ensembl chr 1:261,291,870...261,318,984
JBrowse link
histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:34,362,635...34,406,282
Ensembl chr 7:34,361,633...34,406,318
JBrowse link
G Hal histidine ammonia lyase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:52899|PMID:8486363)
RGD PMID:8486363, PMID:21873635 MGI:52899, RGD:13792537 NCBI chr 7:34,326,087...34,356,413
Ensembl chr 7:34,326,087...34,356,413
JBrowse link
G Hdc histidine decarboxylase involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:2138019|PMID:11478947)
(PMID:22767596)
GO_REF:0000107
RGD
Ensembl
PMID:11478947 PMID:22767596, PMID:21873635 GO_REF:0000107 MGI:2138019, RGD:13792537 NCBI chr 3:119,057,524...119,075,599
Ensembl chr 3:119,057,517...119,075,619
JBrowse link
G Uroc1 urocanate hydratase 1 involved_in ISO
IBA
(PMID:19304569)
PMID:21873635
RGD PMID:19304569, PMID:21873635 RGD:13792537 NCBI chr 4:122,244,744...122,276,357
Ensembl chr 4:122,244,711...122,276,361
JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,362,635...34,406,282
Ensembl chr 7:34,361,633...34,406,318
JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,806,957...12,820,466
Ensembl chr20:12,806,957...12,820,466
JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,326,087...34,356,413
Ensembl chr 7:34,326,087...34,356,413
JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:122,244,744...122,276,357
Ensembl chr 4:122,244,711...122,276,361
JBrowse link
histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,362,635...34,406,282
Ensembl chr 7:34,361,633...34,406,318
JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr20:12,806,957...12,820,466
Ensembl chr20:12,806,957...12,820,466
JBrowse link
G Hal histidine ammonia lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:34,326,087...34,356,413
Ensembl chr 7:34,326,087...34,356,413
JBrowse link
G Uroc1 urocanate hydratase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:122,244,744...122,276,357
Ensembl chr 4:122,244,711...122,276,361
JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blmh bleomycin hydrolase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:63,197,367...63,240,447
Ensembl chr10:63,197,364...63,240,332
JBrowse link
G Cbs cystathionine beta synthase involved_in ISO
ISS
(PMID:18776696), (PMID:24416422)
GO_REF:0000024
RGD
UniProt
PMID:18776696 PMID:24416422 GO_REF:0000024 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISO (PMID:11466310) RGD PMID:11466310 NCBI chr 1:37,743,089...37,774,485
Ensembl chr 1:37,743,147...37,774,015
JBrowse link
homogentisate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:146,713,663...146,736,339
Ensembl chr 1:146,713,676...146,736,261
JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadsb acyl-CoA dehydrogenase, short/branched chain involved_in ISO
IEA
ISS
(PMID:11013134)
GO_REF:0000041
GO_REF:0000024
RGD
UniProt
PMID:11013134 GO_REF:0000024 GO_REF:0000041 NCBI chr 1:201,981,362...202,022,771
Ensembl chr 1:201,981,357...202,021,008
JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:1979337), (PMID:8103405) RGD PMID:1979337 PMID:8103405 NCBI chr 8:58,166,990...58,195,884
Ensembl chr 8:58,166,990...58,195,884
JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
MGI:3772355 (MGI:3770498|PMID:17767905)
GO_REF:0000107
RGD
Ensembl
PMID:17767905, PMID:11733007 GO_REF:0000107 MGI:3770498, RGD:1582175 NCBI chr 1:101,553,900...101,572,103
Ensembl chr 1:101,554,642...101,572,080
JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase IMP RGD PMID:27472223 RGD:39131293 NCBI chr 1:199,351,628...199,356,299
Ensembl chr 1:199,351,628...199,356,881
JBrowse link
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 involved_in ISO
IEA
ISS
(PMID:18996107), (PMID:19706438)
GO_REF:0000107
GO_REF:0000041
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18996107 PMID:19706438 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr  X:21,696,796...21,699,241
Ensembl chr  X:21,696,772...21,699,241
JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:17696873), (PMID:18492492), (PMID:22198249) RGD PMID:17696873 PMID:18492492 PMID:22198249 NCBI chr 9:100,281,339...100,291,292
Ensembl chr 9:100,281,339...100,291,291
JBrowse link
G Gpt glutamic--pyruvic transaminase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:117,759,083...117,761,932
Ensembl chr 7:117,759,083...117,761,931
JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine-glyoxylate aminotransferase 2 involved_in ISO
IBA
(PMID:20018850)
PMID:21873635
RGD PMID:20018850, PMID:21873635 RGD:13792537 NCBI chr 2:60,337,667...60,379,144
Ensembl chr 2:60,337,667...60,379,420
JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:18492492) RGD PMID:18492492 NCBI chr 9:100,281,339...100,291,292
Ensembl chr 9:100,281,339...100,291,291
JBrowse link
G Cbs cystathionine beta synthase involved_in ISO (PMID:15520012) RGD PMID:15520012 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Cdo1 cysteine dioxygenase type 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16611641, PMID:21873635 RGD:2301357, RGD:13792537 NCBI chr18:40,702,027...40,716,901
Ensembl chr18:40,701,984...40,716,686
JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in IDA PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 7:143,781,520...143,810,880
Ensembl chr 7:143,781,702...143,793,970
JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in IDA PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chr 7:143,781,520...143,810,880
Ensembl chr 7:143,781,702...143,793,970
JBrowse link
L-kynurenine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kyat1 kynurenine aminotransferase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:8,752,289...8,785,617
Ensembl chr 3:8,752,625...8,766,433
JBrowse link
G Kyat3 kynurenine aminotransferase 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:248,644,473...248,690,289
Ensembl chr 2:248,649,441...248,690,089
JBrowse link
G Kynu kynureninase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:28,416,926...28,566,939
Ensembl chr 3:28,416,954...28,566,928
JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase acts_upstream_of_or_within ISO (MGI:1350812|PMID:10567240) RGD PMID:10567240 MGI:1350812 NCBI chr 4:50,152,005...50,208,935
Ensembl chr 4:50,152,452...50,200,328
JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in ISO
IBA
(PMID:10642506)
PMID:21873635
RGD PMID:10642506, PMID:21873635 RGD:13792537 NCBI chr10:64,951,986...64,964,865
Ensembl chr10:64,952,119...64,964,862
JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr16:32,832,001...32,868,680
Ensembl chr16:32,832,061...32,868,702
JBrowse link
G Aass aminoadipate-semialdehyde synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:50,152,005...50,208,935
Ensembl chr 4:50,152,452...50,200,328
JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 6:108,936,534...108,961,322
Ensembl chr 6:108,936,664...108,959,803
JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase involved_in IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 1:146,713,663...146,736,339
Ensembl chr 1:146,713,676...146,736,261
JBrowse link
G Gstz1 glutathione S-transferase zeta 1 involved_in IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 6:111,176,798...111,187,246
Ensembl chr 6:111,176,798...111,187,244
JBrowse link
G Hgd homogentisate 1, 2-dioxygenase involved_in IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr11:65,983,221...66,034,555
Ensembl chr11:65,983,221...66,034,573
JBrowse link
G Hpd 4-hydroxyphenylpyruvate dioxygenase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr12:38,828,606...38,839,956
Ensembl chr12:38,828,444...38,839,969
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:17356132), (PMID:25767141)
Ensembl
RGD
PMID:17356132 PMID:25767141 GO_REF:0000107 NCBI chr 1:100,811,727...100,836,901
Ensembl chr 1:100,830,064...100,836,677
JBrowse link
G Pah phenylalanine hydroxylase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 7:28,066,639...28,129,772
Ensembl chr 7:28,066,635...28,129,769
JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:4155291, PMID:21873635 RGD:5128604, RGD:13792537 NCBI chr14:70,164,682...70,178,284
Ensembl chr14:70,164,650...70,178,284
JBrowse link
G Tat tyrosine aminotransferase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr19:41,675,639...41,686,195
Ensembl chr19:41,675,355...41,686,229
JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in ISO (PMID:18776696) RGD PMID:18776696 NCBI chr20:10,361,987...10,386,663
Ensembl chr20:10,361,988...10,386,751
JBrowse link
G Sds serine dehydratase involved_in IEA
ISO
GO_REF:0000107
(PMID:15689518), (PMID:18342636)
Ensembl
RGD
PMID:15689518 PMID:18342636 GO_REF:0000107 NCBI chr12:41,620,429...41,627,741
Ensembl chr12:41,620,393...41,627,741
JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO
IBA
(PMID:17482557)
PMID:21873635
RGD PMID:17482557, PMID:21873635 RGD:13792537 NCBI chr10:47,030,813...47,059,216
Ensembl chr10:47,031,050...47,059,216
JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:70,824,718...70,829,822
Ensembl chr 7:70,824,715...70,829,815
JBrowse link
lactate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldhd lactate dehydrogenase D involved_in IBA
ISO
PMID:21873635
(PMID:30931947)
RGD PMID:30931947, PMID:21873635 RGD:13792537 NCBI chr19:43,826,989...43,848,937
Ensembl chr19:43,826,993...43,848,937
JBrowse link
leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Auh AU RNA binding methylglutaconyl-CoA hydratase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:12,310,178...12,405,224
Ensembl chr17:12,310,214...12,405,205
JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase IMP RGD PMID:27472223 RGD:39131293 NCBI chr 1:199,351,628...199,356,299
Ensembl chr 1:199,351,628...199,356,881
JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:154,294,841...154,308,582
Ensembl chr 5:154,294,806...154,308,640
JBrowse link
G Hmgcll1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:83,069,837...83,204,778
Ensembl chr 8:83,070,545...83,205,441
JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in IEA
IDA
ISO
GO_REF:0000041
PMID:6401713
(PMID:7640268)
UniProt
RGD
PMID:7640268, PMID:6401713 GO_REF:0000041, RGD:8554099 NCBI chr 3:110,669,355...110,689,789
Ensembl chr 3:110,669,312...110,690,173
JBrowse link
G Mccc1 methylcrotonyl-CoA carboxylase subunit 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:122,550,777...122,690,540
Ensembl chr 2:122,550,775...122,690,617
JBrowse link
G Mccc2 methylcrotonyl-CoA carboxylase subunit 2 involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 2:30,175,017...30,246,028
Ensembl chr 2:30,175,018...30,246,010
JBrowse link
leukotriene B4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp4f1 cytochrome P450, family 4, subfamily f, polypeptide 1 involved_in IDA
IBA
PMID:14634044
PMID:21873635
PMID:10486137
UniProt
GO_Central
PMID:14634044, PMID:21873635, PMID:10486137 RGD:2301710, RGD:13792537, RGD:2301713 NCBI chr 7:15,179,472...15,191,113
Ensembl chr 7:15,179,467...15,190,796
JBrowse link
G Cyp4f18 cytochrome P450, family 4, subfamily f, polypeptide 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:19,501,680...19,528,935
Ensembl chr16:19,410,810...19,528,999
JBrowse link
G Cyp4f4 cytochrome P450, family 4, subfamily f, polypeptide 4 involved_in IBA
IDA
PMID:21873635
PMID:14634044
PMID:9344476
GO_Central
UniProt
PMID:21873635, PMID:14634044, PMID:9344476 RGD:13792537, RGD:2301710, RGD:15090848 NCBI chr 7:14,891,062...14,907,250
Ensembl chr 7:14,891,001...14,907,305
JBrowse link
G Cyp4f40 cytochrome P450, family 4, subfamily f, polypeptide 40 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:14,865,941...14,880,084
Ensembl chr 7:14,865,941...14,880,084
JBrowse link
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO
ISS
UniProtKB:P34230 (PMID:18757502), (PMID:23671276)
GO_REF:0000024
RGD
UniProt
PMID:18757502 PMID:23671276 GO_REF:0000024 NCBI chr  X:157,073,860...157,095,652
Ensembl chr  X:157,072,736...157,095,274
JBrowse link
G Acadl acyl-CoA dehydrogenase, long chain involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:3968063, PMID:21873635 RGD:2317678, RGD:13792537 NCBI chr 9:73,833,368...73,871,857
Ensembl chr 9:73,833,388...73,871,888
JBrowse link
G Adtrp androgen-dependent TFPI-regulating protein involved_in ISO
IEA
(PMID:27018888)
GO_REF:0000107
RGD
Ensembl
PMID:27018888 GO_REF:0000107 NCBI chr17:22,619,913...22,688,296
Ensembl chr17:22,619,891...22,688,307
JBrowse link
G Aig1 androgen-induced 1 involved_in ISO (PMID:27018888) RGD PMID:27018888 NCBI chr 1:7,816,841...8,038,805
Ensembl chr 1:7,816,838...8,038,665
JBrowse link
G Lipe lipase E, hormone sensitive type acts_upstream_of_or_within ISO (MGI:3654969|PMID:16804080) RGD PMID:16804080 MGI:3654969 NCBI chr 1:82,248,031...82,266,727
Ensembl chr 1:82,248,046...82,266,727
JBrowse link
malonate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO (PMID:21642549), (PMID:21846720) RGD PMID:21642549 PMID:21846720 NCBI chr19:55,594,801...55,635,312
Ensembl chr19:55,594,831...55,635,122
JBrowse link
medium-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd1 abhydrolase domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:26,787,807...26,792,795
Ensembl chr 6:26,784,058...26,792,808
JBrowse link
G Abhd2 abhydrolase domain containing 2, acylglycerol lipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:140,998,240...141,087,405
Ensembl chr 1:140,998,240...141,087,405
JBrowse link
G Abhd3 abhydrolase domain containing 3, phospholipase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:1,892,413...1,946,840
Ensembl chr18:1,892,413...1,946,840
JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in IDA
IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:1970566)
Ensembl
RGD
PMID:1970566, PMID:3968063, PMID:21873635 GO_REF:0000107, RGD:2317678, RGD:13792537 NCBI chr 2:260,124,418...260,148,589
Ensembl chr 2:260,124,418...260,148,589
JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mat1a methionine adenosyltransferase 1A involved_in ISO
IEA
ISS
(PMID:10677294)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:10677294 GO_REF:0000024 GO_REF:0000107 NCBI chr16:18,690,649...18,709,135
Ensembl chr16:18,690,246...18,709,133
JBrowse link
N-acetylneuraminate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd2 amidohydrolase domain containing 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:13,528,400...13,536,949
Ensembl chr10:13,528,413...13,536,899
JBrowse link
G Gnpda1 glucosamine-6-phosphate deaminase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:31,479,117...31,489,154
Ensembl chr18:31,479,117...31,487,671
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:62,628,102...62,646,158
Ensembl chr14:62,628,111...62,646,110
JBrowse link
G Nagk N-acetylglucosamine kinase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 4:115,473,848...115,485,027
Ensembl chr 4:115,473,811...115,481,438
JBrowse link
G Npl N-acetylneuraminate pyruvate lyase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr13:70,938,073...70,981,179
Ensembl chr13:70,938,082...70,980,913
JBrowse link
G Renbp renin binding protein involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:156,854,490...156,863,548
Ensembl chr  X:156,854,594...156,863,528
JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) RGD PMID:19278978 NCBI chr13:50,091,644...50,153,808
Ensembl chr13:50,091,430...50,153,823
JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (MGI:3530688|PMID:15677334), (MGI:3629477|PMID:12920182) RGD PMID:12920182 PMID:15677334 MGI:3530688 MGI:3629477 NCBI chr12:48,127,149...48,238,969
Ensembl chr12:48,127,149...48,238,887
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:16814735) RGD PMID:16814735 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Cnr1 cannabinoid receptor 1 IMP RGD PMID:19724020 RGD:2314644 NCBI chr 5:49,307,584...49,333,064
Ensembl chr 5:49,311,030...49,333,056
JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein IDA RGD PMID:11485163 RGD:2316274 NCBI chr13:36,147,667...36,156,076
Ensembl chr13:36,117,119...36,174,908
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A acts_upstream_of_or_within ISO (MGI:5474727|PMID:23209793) RGD PMID:23209793 MGI:5474727 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745
JBrowse link
G Plin5 perilipin 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:5440401|PMID:22532565), (MGI:5559662|PMID:22675471), (MGI:5559666|PMID:21885430)
UniProt
RGD
PMID:21885430 PMID:22532565 PMID:22675471 GO_REF:0000024 MGI:5440401 MGI:5559662 MGI:5559666 NCBI chr 9:10,956,013...10,961,782
Ensembl chr 9:10,956,056...10,961,782
JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase involved_in ISO
ISS
(PMID:25416781)
GO_REF:0000024
(MGI:5700285|PMID:25023281)
RGD
UniProt
PMID:25023281 PMID:25416781 GO_REF:0000024 MGI:5700285 NCBI chr 4:183,655,968...183,665,757
Ensembl chr 4:183,656,013...183,665,754
JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otc ornithine transcarbamylase involved_in ISO (PMID:2556444), (PMID:8112735) RGD PMID:2556444 PMID:8112735 NCBI chr  X:13,524,804...13,601,074
Ensembl chr  X:13,524,607...13,601,069
JBrowse link
phenylacetate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa1a acetyl-CoA acyltransferase 1A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:128,027,880...128,036,471
Ensembl chr 8:128,027,958...128,036,236
JBrowse link
G Acaa1b acetyl-Coenzyme A acyltransferase 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:127,836,235...127,845,296 JBrowse link
G Pon3 paraoxonase 3 IDA RGD PMID:12946270 RGD:1303961 NCBI chr 4:30,311,981...30,338,679
Ensembl chr 4:30,311,982...30,338,679
JBrowse link
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO
ISS
(PMID:23123468)
(MGI:3835692|PMID:18854420), (MGI:3836690|PMID:18723473), (MGI:6189665|PMID:23123468)
GO_REF:0000024
RGD
UniProt
PMID:18723473 PMID:18854420 PMID:23123468 GO_REF:0000024 MGI:3835692 MGI:3836690 MGI:6189665 NCBI chr  X:157,073,860...157,095,652
Ensembl chr  X:157,072,736...157,095,274
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO
IEA
ISS
(PMID:10196381)
(MGI:3835692|PMID:18854420), (MGI:3836690|PMID:18723473)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:10196381 PMID:18723473 PMID:18854420 GO_REF:0000024 GO_REF:0000107 MGI:3835692 MGI:3836690 NCBI chr 7:132,294,564...132,343,169
Ensembl chr 7:132,294,562...132,343,169
JBrowse link
G Acsl5 acyl-CoA synthetase long-chain family member 5 IGI RGD PMID:14711823 RGD:2312802 NCBI chr 1:276,240,703...276,290,012
Ensembl chr 1:276,240,703...276,290,008
JBrowse link
G Akt2 AKT serine/threonine kinase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:16814735)
Ensembl
RGD
PMID:16814735 GO_REF:0000107 NCBI chr 1:84,400,939...84,451,223
Ensembl chr 1:84,411,726...84,450,162
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A IMP RGD PMID:19302064 RGD:2311346 NCBI chr 1:218,568,157...218,629,679
Ensembl chr 1:218,569,510...218,629,678
JBrowse link
G Fabp1 fatty acid binding protein 1 IDA peroxisomal RGD PMID:16262600 RGD:1626442 NCBI chr 4:99,063,181...99,066,957
Ensembl chr 4:99,063,181...99,066,954
JBrowse link
G Irs1 insulin receptor substrate 1 involved_in ISO
IEA
(PMID:16814735)
GO_REF:0000107
RGD
Ensembl
PMID:16814735 GO_REF:0000107 NCBI chr 9:88,033,668...88,086,488
Ensembl chr 9:88,033,668...88,086,488
JBrowse link
G Irs2 insulin receptor substrate 2 involved_in ISO (PMID:16814735) RGD PMID:16814735 NCBI chr16:83,824,515...83,848,569
Ensembl chr16:83,824,430...83,848,684
JBrowse link
G Obp2a odorant binding protein 2A acts_upstream_of_or_within ISO (MGI:5297637|PMID:21908604) RGD PMID:21908604 MGI:5297637 NCBI chr 3:2,908,684...2,913,362
Ensembl chr 3:2,910,083...2,913,362
JBrowse link
G Pink1 PTEN induced kinase 1 HMP RGD PMID:25421206 RGD:11560775 NCBI chr 5:156,677,146...156,689,258
Ensembl chr 5:156,677,146...156,689,415
JBrowse link
G Plin5 perilipin 5 involved_in IDA
ISO
PMID:22127648
(MGI:3709110|PMID:17130488)
RGD PMID:17130488, PMID:22127648 MGI:3709110, RGD:8553692 NCBI chr 9:10,956,013...10,961,782
Ensembl chr 9:10,956,056...10,961,782
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:20007935) RGD PMID:20007935 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino-acid oxidase involved_in ISO
IBA
IEA
(PMID:16616139)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:16616139, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr12:48,353,691...48,373,647
Ensembl chr12:48,354,196...48,365,784
JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:88,955,125...88,968,501
Ensembl chr 1:88,955,135...88,968,501
JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:158,090,238...158,115,725
Ensembl chr 5:158,042,587...158,135,733
JBrowse link
G Iffo2 intermediate filament family orphan 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:158,042,587...158,083,311
Ensembl chr 5:158,042,587...158,135,733
JBrowse link
G Prodh1 proline dehydrogenase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:87,058,478...87,075,785
Ensembl chr11:87,058,616...87,075,785
JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:88,955,125...88,968,501
Ensembl chr 1:88,955,135...88,968,501
JBrowse link
G Tas1r2 taste 1 receptor member 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:158,119,894...158,135,733
Ensembl chr 5:158,042,587...158,135,733
JBrowse link
propionate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pck1 phosphoenolpyruvate carboxykinase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:171,213,936...171,219,885
Ensembl chr 3:171,213,936...171,219,871
JBrowse link
G Pck2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:34,216,735...34,224,357
Ensembl chr15:34,216,833...34,224,193
JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qprt quinolinate phosphoribosyltransferase involved_in ISO
IBA
(PMID:24038671), (PMID:3409840), (PMID:9473669)
PMID:21873635
RGD PMID:3409840 PMID:9473669 PMID:24038671, PMID:21873635 RGD:13792537 NCBI chr 1:198,544,262...198,559,556
Ensembl chr 1:198,544,262...198,559,568
JBrowse link
regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5442473|PMID:22619174)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22619174 GO_REF:0000024 GO_REF:0000107 MGI:5442473 NCBI chr 3:55,480,024...55,587,946
Ensembl chr 3:55,480,024...55,587,946
JBrowse link
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (MGI:1095802|PMID:9256488), (MGI:1101351|PMID:9418970), (MGI:5635749|PMID:25255441), (MGI:87573|PMID:9126326) RGD PMID:9126326 PMID:9256488 PMID:9418970 PMID:25255441 MGI:1095802 MGI:1101351 MGI:5635749 MGI:87573 NCBI chr  X:157,073,860...157,095,652
Ensembl chr  X:157,072,736...157,095,274
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A TAS RGD PMID:11087756 RGD:1600733 NCBI chr 1:218,568,157...218,629,679
Ensembl chr 1:218,569,510...218,629,678
JBrowse link
G Lonp2 lon peptidase 2, peroxisomal involved_in ISO (PMID:22002062) RGD PMID:22002062 NCBI chr19:21,400,736...21,492,634
Ensembl chr19:21,400,740...21,492,556
JBrowse link
G Mlycd malonyl-CoA decarboxylase IDA RGD PMID:10516138 RGD:1600797 NCBI chr19:52,032,950...52,048,773
Ensembl chr19:52,032,886...52,048,753
JBrowse link
G Mtor mechanistic target of rapamycin kinase IDA
IMP
RGD PMID:17142137, PMID:17142137 RGD:1625611, RGD:1625611 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Tysnd1 trypsin like peroxisomal matrix peptidase 1 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:22002062)
UniProt
RGD
PMID:22002062, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:31,313,018...31,318,736
Ensembl chr20:31,313,018...31,318,736
JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crabp1 cellular retinoic acid binding protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 8:59,344,097...59,352,135
Ensembl chr 8:59,344,083...59,352,132
JBrowse link
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 involved_in ISO (PMID:10823918)
(MGI:894533|PMID:9250660)
RGD PMID:9250660 PMID:10823918 MGI:894533 NCBI chr 1:256,382,861...256,386,729
Ensembl chr 1:256,382,791...256,386,729
JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in IMP
ISO
(PMID:10823918) RGD PMID:10823918, PMID:21138835 RGD:6771354 NCBI chr 4:116,261,796...116,278,615
Ensembl chr 4:116,261,796...116,278,615
JBrowse link
G Cyp26c1 cytochrome P450, family 26, subfamily C, polypeptide 1 involved_in ISO (PMID:14532297) RGD PMID:14532297 NCBI chr 1:256,369,410...256,380,649
Ensembl chr 1:256,370,850...256,378,335
JBrowse link
G Cyp2w1 cytochrome P450, family 2, subfamily w, polypeptide 1 involved_in ISO (PMID:26936974) RGD PMID:26936974 NCBI chr12:17,382,749...17,387,909
Ensembl chr12:17,383,159...17,387,879
JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase acts_upstream_of_or_within IDA
ISO
(MGI:2183618|PMID:12023972) RGD PMID:12023972, PMID:11741948 MGI:2183618, RGD:730275 NCBI chr 3:150,587,833...150,603,057
Ensembl chr 3:150,587,833...150,603,082
JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sardh sarcosine dehydrogenase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:5,737,203...5,802,153
Ensembl chr 3:5,737,200...5,802,129
JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scly selenocysteine lyase involved_in IMP PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chr 9:98,438,408...98,459,075
Ensembl chr 9:98,438,439...98,459,080
JBrowse link
serine family amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase-like 2 involved_in IBA
ISO
PMID:21873635
(MGI:3690523|PMID:17034760)
RGD PMID:17034760, PMID:21873635 MGI:3690523, RGD:13792537 NCBI chr 4:98,976,559...98,997,187
Ensembl chr 4:98,976,550...98,995,590
JBrowse link
short-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ces1d carboxylesterase 1D involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3654969|PMID:16804080)
Ensembl
RGD
PMID:16804080 GO_REF:0000107 MGI:3654969 NCBI chr19:15,195,514...15,239,827
Ensembl chr19:15,033,108...15,239,821
JBrowse link
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcat glycine C-acetyltransferase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:120,263,068...120,269,365
Ensembl chr 7:120,263,054...120,269,451
JBrowse link
G LOC688286 similar to threonine aldolase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:106,877,585...106,883,706
Ensembl chr10:106,878,085...106,883,423
JBrowse link
G Sds serine dehydratase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,620,429...41,627,741
Ensembl chr12:41,620,393...41,627,741
JBrowse link
G Sdsl serine dehydratase-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:41,636,994...41,647,205
Ensembl chr12:41,636,994...41,647,205
JBrowse link
G Tdh L-threonine dehydrogenase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5292271|PMID:21896756)
(MGI:5905531|PMID:26492815)
RGD PMID:21896756 PMID:26492815, PMID:21873635 MGI:5292271 MGI:5905531, RGD:13792537 NCBI chr15:46,667,926...46,682,752
Ensembl chr15:46,667,926...46,681,467
JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase IDA RGD PMID:11802786 RGD:70243 NCBI chr13:44,424,689...44,468,734
Ensembl chr13:44,424,689...44,468,734
JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 6:7,045,145...7,059,227
Ensembl chr 6:7,045,152...7,058,314
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) RGD PMID:17356132 PMID:25767141 NCBI chr 1:100,811,727...100,836,901
Ensembl chr 1:100,830,064...100,836,677
JBrowse link
G Kmo kynurenine 3-monooxygenase involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr13:93,684,324...93,715,378
Ensembl chr13:93,684,437...93,716,227
JBrowse link
G Kynu kynureninase involved_in ISO (PMID:17334708) RGD PMID:17334708 NCBI chr 3:28,416,926...28,566,939
Ensembl chr 3:28,416,954...28,566,928
JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase IDA RGD PMID:7236232 RGD:2303721 NCBI chr 3:28,416,926...28,566,939
Ensembl chr 3:28,416,954...28,566,928
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:7236232, PMID:21873635 RGD:2303721, RGD:13792537 NCBI chr 2:180,897,059...180,914,919
Ensembl chr 2:180,897,011...180,914,940
JBrowse link
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO
IEA
(PMID:32818467), (PMID:32866000)
GO_REF:0000107
RGD
Ensembl
PMID:32818467 PMID:32866000 GO_REF:0000107 NCBI chr 1:100,811,727...100,836,901
Ensembl chr 1:100,830,064...100,836,677
JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:3587527|PMID:15866519)
GO_REF:0000041
RGD
UniProt
PMID:15866519, PMID:21873635 GO_REF:0000041 MGI:3587527, RGD:13792537 NCBI chr10:106,828,963...106,844,314
Ensembl chr10:106,828,981...106,844,314
JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
IBA
GO_REF:0000002
(MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753)
GO_REF:0000107
PMID:21873635
InterPro
RGD
Ensembl
PMID:2419335 PMID:11751753, PMID:10719243, PMID:21873635, PMID:11513477 GO_REF:0000002 GO_REF:0000107 MGI:2151782 MGI:2156954, RGD:2290190, RGD:13792537, RGD:2290543 NCBI chr16:72,216,326...72,228,098
Ensembl chr16:72,216,326...72,228,098
JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:3712725|PMID:17499941), (MGI:3719924|PMID:17671174)
(PMID:17671174)
GO_REF:0000041
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:17499941 PMID:17671174, PMID:21873635 GO_REF:0000041 GO_REF:0000107 MGI:3712725 MGI:3719924, RGD:13792537 NCBI chr16:72,232,852...72,291,227
Ensembl chr16:72,268,943...72,289,156
JBrowse link
G Kynu kynureninase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:28,416,926...28,566,939
Ensembl chr 3:28,416,954...28,566,928
JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:27762317)
GO_REF:0000041
UniProt
RGD
PMID:27762317 GO_REF:0000024 GO_REF:0000041 NCBI chr 2:180,897,059...180,914,919
Ensembl chr 2:180,897,011...180,914,940
JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase involved_in IEA
IBA
GO_REF:0000104
PMID:21873635
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 1:146,713,663...146,736,339
Ensembl chr 1:146,713,676...146,736,261
JBrowse link
G Gstz1 glutathione S-transferase zeta 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:111,176,798...111,187,246
Ensembl chr 6:111,176,798...111,187,244
JBrowse link
G Hpd 4-hydroxyphenylpyruvate dioxygenase involved_in TAS
IBA
IDA
PMID:21873635
PMID:8814303
RGD
GO_Central
UniProt
PMID:12867153, PMID:21873635, PMID:8814303 RGD:632936, RGD:13792537, RGD:8554707 NCBI chr12:38,828,606...38,839,956
Ensembl chr12:38,828,444...38,839,969
JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO
IEA
(PMID:17356132)
GO_REF:0000107
RGD
Ensembl
PMID:17356132 GO_REF:0000107 NCBI chr 1:100,811,727...100,836,901
Ensembl chr 1:100,830,064...100,836,677
JBrowse link
G Tat tyrosine aminotransferase involved_in ISO
ISS
(PMID:7999802)
(MGI:5430853|PMID:21153519)
GO_REF:0000024
RGD
UniProt
PMID:7999802 PMID:21153519 GO_REF:0000024 MGI:5430853 NCBI chr19:41,675,639...41,686,195
Ensembl chr19:41,675,355...41,686,229
JBrowse link
valine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family, member A1 involved_in IDA
IEA
ISO
IBA
GO_REF:0000107
(PMID:23835272)
PMID:21873635
Ensembl
RGD
PMID:23835272, PMID:2768248, PMID:21873635 GO_REF:0000107, RGD:1599052, RGD:13792537 NCBI chr 6:108,146,552...108,167,185
Ensembl chr 6:108,146,582...108,167,185
JBrowse link
G Bckdk branched chain ketoacid dehydrogenase kinase IMP RGD PMID:27472223 RGD:39131293 NCBI chr 1:199,351,628...199,356,299
Ensembl chr 1:199,351,628...199,356,881
JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase involved_in IBA
ISS
ISO
IEA
PMID:21873635
GO_REF:0000024
(PMID:16466957)
GO_REF:0000041
UniProt
RGD
PMID:16466957, PMID:21873635 GO_REF:0000024 GO_REF:0000041, RGD:13792537 NCBI chr 4:82,604,369...82,702,429
Ensembl chr 4:82,604,373...82,702,429
JBrowse link
G Hibch 3-hydroxyisobutyryl-CoA hydrolase involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 9:53,446,185...53,526,727
Ensembl chr 9:53,446,194...53,526,728
JBrowse link
very long-chain fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acox1 acyl-CoA oxidase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:32169171)
Ensembl
RGD
PMID:32169171 GO_REF:0000107 NCBI chr10:104,724,534...104,748,003
Ensembl chr10:104,722,958...104,748,050
JBrowse link
very long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in IBA
ISO
IMP
ISS
PMID:21873635
(MGI:3836690|PMID:18723473)
PMID:25043761
UniProtKB:P34230|UniProtKB:P41909 (PMID:18757502), (PMID:21145416), (PMID:9425230)
GO_REF:0000024
RGD
UniProt
PMID:9425230 PMID:18723473 PMID:18757502 PMID:21145416, PMID:21873635, PMID:25043761 GO_REF:0000024 MGI:3836690, RGD:13792537, RGD:13673760 NCBI chr  X:157,073,860...157,095,652
Ensembl chr  X:157,072,736...157,095,274
JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in IMP
ISO
ISS
IBA
IEA
PMID:25043761
(MGI:3836690|PMID:18723473)
GO_REF:0000024
PMID:21873635
UniProtKB:P41909 (PMID:21145416)
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:18723473 PMID:21145416, PMID:25043761, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3836690, RGD:13673760, RGD:13792537 NCBI chr 7:132,294,564...132,343,169
Ensembl chr 7:132,294,562...132,343,169
JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in IBA
ISO
PMID:21873635
UniProtKB:P33897 (PMID:9425230)
RGD PMID:9425230, PMID:21873635 RGD:13792537 NCBI chr 2:225,335,708...225,389,120
Ensembl chr 2:225,335,718...225,389,120
JBrowse link
G Abcd4 ATP binding cassette subfamily D member 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:108,315,026...108,329,550
Ensembl chr 6:108,315,035...108,329,464
JBrowse link
G Acot2 acyl-CoA thioesterase 2 IDA RGD PMID:7744868 RGD:2315867 NCBI chr 6:107,460,596...107,468,324
Ensembl chr 6:107,460,668...107,467,487
JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:2663647 (MGI:2662022|PMID:12719378)
PMID:21873635
Ensembl
RGD
PMID:12719378, PMID:21873635 GO_REF:0000107 MGI:2662022, RGD:13792537 NCBI chr 3:119,014,620...119,052,531
Ensembl chr 3:119,014,620...119,052,531
JBrowse link
G Slc27a4 solute carrier family 27 member 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3719310|PMID:17522045)
RGD PMID:17522045, PMID:21873635 MGI:3719310, RGD:13792537 NCBI chr 3:8,363,937...8,376,858
Ensembl chr 3:8,363,937...8,376,858
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19638
    metabolic process 11894
      cellular metabolic process 10847
        organic acid metabolic process 1006
          organic acid catabolic process 231
            2-aminobenzenesulfonate catabolic process 0
            6-sulfoquinovose(1-) catabolic process + 0
            alpha-amino acid catabolic process + 81
            aromatic amino acid family catabolic process + 16
            arsonoacetate catabolic process 0
            branched-chain amino acid catabolic process + 13
            carboxylic acid catabolic process + 224
            chrysobactin catabolic process 0
            cspyrone B1 catabolic process 0
            endocrocin catabolic process 0
            fumagillin catabolic process 0
            fumonisin catabolic process 0
            gerfelin catabolic process 0
            gibberellin catabolic process 0
            monensin A catabolic process 0
            monodictyphenone catabolic process 0
            monounsaturated fatty acid catabolic process 0
            pyochelin catabolic process 0
            sulfur amino acid catabolic process + 7
            taurine catabolic process 0
            tensidol B catabolic process 0
            toluene-4-sulfonate catabolic process 0
paths to the root