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ONTOLOGY REPORT - ANNOTATIONS


Term:viral process
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Accession:GO:0016032 term browser browse the term
Definition:A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
Comment:See also the biological process terms 'viral infectious cycle ; GO:0019058' and 'lysogeny ; GO:0030069'.
Synonyms:exact_synonym: virus process
 related_synonym: viral infection;   virulence
 alt_id: GO:0022415
 xref: Wikipedia:Viral_life_cycle


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viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AAAS aladin WD repeat nucleoporin involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr12:53,307,456...53,321,610
Ensembl chr12:53,307,456...53,324,864
JBrowse link
G BICD1 BICD cargo adaptor 1 involved_in IMP (PMID:20089649) BHF-UCL PMID:20089649 NCBI chr12:32,106,773...32,383,637
Ensembl chr12:32,106,835...32,383,633
JBrowse link
G CALCOCO2 calcium binding and coiled-coil domain 2 involved_in TAS (PMID:7540613) PINC PMID:7540613 NCBI chr17:48,831,035...48,865,245
Ensembl chr17:48,831,018...48,866,522
JBrowse link
G CCL1 C-C motif chemokine ligand 1 involved_in TAS (PMID:9417093) PINC PMID:9417093 NCBI chr17:34,360,328...34,363,233
Ensembl chr17:34,360,328...34,363,233
JBrowse link
G CHMP1A charged multivesicular body protein 1A involved_in TAS Reactome Reactome:R-HSA-9610942 Reactome:R-HSA-9610954 NCBI chr16:89,644,435...89,657,708
Ensembl chr16:89,640,816...89,657,738
JBrowse link
G ERVK-5 endogenous retrovirus group K member 5 involved_in IEA InterPro GO_REF:0000002
G ERVK-6 endogenous retrovirus group K member 6, envelope involved_in IEA InterPro GO_REF:0000002
G ERVK-7 endogenous retrovirus group K member 7 involved_in IEA InterPro GO_REF:0000002
G GFI1 growth factor independent 1 transcriptional repressor involved_in TAS (PMID:8441411) PINC PMID:8441411 NCBI chr 1:92,473,043...92,486,925
Ensembl chr 1:92,473,043...92,486,925
JBrowse link
G HCFC2 host cell factor C2 involved_in TAS (PMID:10196288) PINC PMID:10196288 NCBI chr12:104,064,526...104,108,954
Ensembl chr12:104,064,531...104,106,524
JBrowse link
G NDC1 NDC1 transmembrane nucleoporin involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 1:53,765,478...53,838,296
Ensembl chr 1:53,765,478...53,838,463
JBrowse link
G NUP107 nucleoporin 107 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr12:68,686,971...68,745,809
Ensembl chr12:68,686,951...68,745,809
JBrowse link
G NUP133 nucleoporin 133 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 1:229,440,259...229,508,342
Ensembl chr 1:229,440,259...229,508,341
JBrowse link
G NUP153 nucleoporin 153 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 6:17,615,036...17,706,925
Ensembl chr 6:17,615,035...17,706,925
JBrowse link
G NUP155 nucleoporin 155 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 5:37,288,137...37,371,106
Ensembl chr 5:37,288,137...37,371,106
JBrowse link
G NUP160 nucleoporin 160 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr11:47,778,083...47,848,544
Ensembl chr11:47,778,087...47,848,555
JBrowse link
G NUP188 nucleoporin 188 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 9:128,947,699...129,007,096
Ensembl chr 9:128,947,699...129,007,096
JBrowse link
G NUP205 nucleoporin 205 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 7:135,557,917...135,648,753
Ensembl chr 7:135,557,917...135,648,757
JBrowse link
G NUP210 nucleoporin 210 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 3:13,316,235...13,420,322
Ensembl chr 3:13,316,235...13,420,322
JBrowse link
G NUP214 nucleoporin 214 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 9:131,125,586...131,234,663
Ensembl chr 9:131,125,586...131,234,663
JBrowse link
G NUP35 nucleoporin 35 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 2:183,117,480...183,161,680
Ensembl chr 2:183,117,513...183,161,680
JBrowse link
G NUP37 nucleoporin 37 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr12:102,073,103...102,120,131
Ensembl chr12:102,073,103...102,120,120
JBrowse link
G NUP42 nucleoporin 42 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 7:23,181,298...23,201,011
Ensembl chr 7:23,181,841...23,201,011
JBrowse link
G NUP43 nucleoporin 43 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 6:149,724,315...149,746,529
Ensembl chr 6:149,724,315...149,749,665
JBrowse link
G NUP50 nucleoporin 50 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr22:45,163,925...45,188,017
Ensembl chr22:45,163,925...45,188,017
JBrowse link
G NUP54 nucleoporin 54 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 4:76,114,664...76,148,434
Ensembl chr 4:76,114,659...76,148,444
JBrowse link
G NUP58 nucleoporin 58 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr13:25,301,084...25,349,795
Ensembl chr13:25,301,556...25,349,800
JBrowse link
G NUP62 nucleoporin 62 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr19:49,906,825...49,929,504
Ensembl chr19:49,906,825...49,929,763
JBrowse link
G NUP85 nucleoporin 85 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr17:75,205,557...75,235,758
Ensembl chr17:75,205,659...75,235,758
JBrowse link
G NUP88 nucleoporin 88 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr17:5,384,833...5,419,662
Ensembl chr17:5,360,963...5,419,676
JBrowse link
G NUP93 nucleoporin 93 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr16:56,730,129...56,850,286
Ensembl chr16:56,730,118...56,850,286
JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr11:3,675,010...3,797,554
Ensembl chr11:3,671,083...3,797,792
JBrowse link
G PARD6A par-6 family cell polarity regulator alpha involved_in TAS (PMID:9482110) PINC PMID:9482110 NCBI chr16:67,660,956...67,662,774
Ensembl chr16:67,660,946...67,662,774
JBrowse link
G POM121 POM121 transmembrane nucleoporin involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 7:72,879,357...72,951,459
Ensembl chr 7:72,879,365...72,951,440
JBrowse link
G POM121C POM121 transmembrane nucleoporin C involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 7:75,416,786...75,486,299
Ensembl chr 7:75,416,786...75,486,299
JBrowse link
G RAE1 ribonucleic acid export 1 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr20:57,351,239...57,379,202
Ensembl chr20:57,351,223...57,379,211
JBrowse link
G RAN RAN, member RAS oncogene family involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr12:130,871,879...130,877,678
Ensembl chr12:130,872,037...130,877,678
JBrowse link
G RANBP1 RAN binding protein 1 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr22:20,116,104...20,127,355
Ensembl chr22:20,115,938...20,127,355
JBrowse link
G RANBP2 RAN binding protein 2 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 2:108,719,446...108,785,809
Ensembl chr 2:108,719,482...108,785,809
JBrowse link
G RCC1 regulator of chromosome condensation 1 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 1:28,506,043...28,538,989
Ensembl chr 1:28,505,943...28,539,300
JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 3:10,300,931...10,321,112
Ensembl chr 3:10,293,131...10,321,112
JBrowse link
G SEH1L SEH1 like nucleoporin involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr18:12,947,988...12,987,665
Ensembl chr18:12,947,133...12,987,536
JBrowse link
G TP53 tumor protein p53 involved_in IMP (PMID:22574148) CACAO PMID:22574148 NCBI chr17:7,668,421...7,687,490
Ensembl chr17:7,661,779...7,687,538
JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 1:186,311,652...186,375,253
Ensembl chr 1:186,311,652...186,375,693
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in TAS Reactome Reactome:R-HSA-9610942 Reactome:R-HSA-9610954 NCBI chr16:69,311,350...69,326,939
Ensembl chr16:69,311,350...69,326,939
JBrowse link
G XPO1 exportin 1 involved_in TAS Reactome Reactome:R-HSA-162599 NCBI chr 2:61,477,849...61,538,522
Ensembl chr 2:61,476,032...61,538,741
JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SIGLEC1 sialic acid binding Ig like lectin 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:3,686,970...3,712,600
Ensembl chr20:3,686,970...3,712,600
JBrowse link
coreceptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NECTIN2 nectin cell adhesion molecule 2 involved_in IDA
IBA
(PMID:12915581)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:12915581 PMID:21873635 NCBI chr19:44,846,297...44,889,223
Ensembl chr19:44,846,175...44,889,223
JBrowse link
DNA-templated viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX9 DExH-box helicase 9 involved_in IDA (PMID:11096080) UniProt PMID:11096080 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
early viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNT2 cyclin T2 involved_in IDA (PMID:21509660) UniProt PMID:21509660 NCBI chr 2:134,918,810...134,959,342
Ensembl chr 2:134,918,235...134,959,342
JBrowse link
G MON1B MON1 homolog B, secretory trafficking associated involved_in IDA (PMID:21509660) UniProt PMID:21509660 NCBI chr16:77,191,190...77,202,398
Ensembl chr16:77,190,835...77,202,398
JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KPNA2 karyopherin subunit alpha 2 acts_upstream_of_or_within IMP (PMID:28189564) MGI PMID:28189564 NCBI chr17:68,035,735...68,046,854
Ensembl chr17:68,035,636...68,047,364
JBrowse link
G KPNA6 karyopherin subunit alpha 6 acts_upstream_of_or_within IMP (PMID:28189564) MGI PMID:28189564 NCBI chr 1:32,108,043...32,176,563
Ensembl chr 1:32,108,056...32,176,563
JBrowse link
establishment of integrated proviral latency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BANF1 BAF nuclear assembly factor 1 involved_in TAS Reactome Reactome:R-HSA-162592 Reactome:R-HSA-175567 NCBI chr11:66,002,079...66,004,149
Ensembl chr11:66,002,228...66,004,149
JBrowse link
G HMGA1 high mobility group AT-hook 1 involved_in TAS Reactome Reactome:R-HSA-162592 Reactome:R-HSA-175567 NCBI chr 6:34,236,873...34,246,231
Ensembl chr 6:34,236,873...34,246,231
JBrowse link
G LIG4 DNA ligase 4 involved_in TAS Reactome Reactome:R-HSA-162592 NCBI chr13:108,207,442...108,218,349
Ensembl chr13:108,207,439...108,218,368
JBrowse link
G PPIA peptidylprolyl isomerase A involved_in TAS Reactome Reactome:R-HSA-162592 NCBI chr 7:44,795,960...44,803,117
Ensembl chr 7:44,796,680...44,824,564
JBrowse link
G PSIP1 PC4 and SFRS1 interacting protein 1 involved_in TAS Reactome Reactome:R-HSA-162592 Reactome:R-HSA-175567 NCBI chr 9:15,464,066...15,511,004
Ensembl chr 9:15,464,066...15,510,995
JBrowse link
G XRCC4 X-ray repair cross complementing 4 involved_in TAS Reactome Reactome:R-HSA-162592 NCBI chr 5:83,077,534...83,370,333
Ensembl chr 5:83,077,498...83,353,787
JBrowse link
G XRCC5 X-ray repair cross complementing 5 involved_in TAS Reactome Reactome:R-HSA-162592 NCBI chr 2:216,109,348...216,206,293
Ensembl chr 2:216,107,464...216,206,303
JBrowse link
G XRCC6 X-ray repair cross complementing 6 involved_in TAS Reactome Reactome:R-HSA-162592 NCBI chr22:41,621,295...41,664,041
Ensembl chr22:41,621,163...41,664,048
JBrowse link
establishment of viral latency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CREB3 cAMP responsive element binding protein 3 involved_in IDA (PMID:20091349) UniProt PMID:20091349 NCBI chr 9:35,732,666...35,736,999
Ensembl chr 9:35,732,598...35,736,999
JBrowse link
G IRF7 interferon regulatory factor 7 involved_in TAS (PMID:21490621) UniProt PMID:21490621 NCBI chr11:612,555...615,999
Ensembl chr11:612,553...615,983
JBrowse link
fusion of virus membrane with host endosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTSL cathepsin L involved_in IDA (PMID:16081529), (PMID:18562523) UniProt PMID:16081529 PMID:18562523 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,724,051...87,731,469
JBrowse link
fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCR5 C-C motif chemokine receptor 5 involved_in TAS Reactome Reactome:R-HSA-164524 NCBI chr 3:46,370,142...46,376,206
Ensembl chr 3:46,370,854...46,376,206
JBrowse link
G CD4 CD4 molecule involved_in TAS Reactome Reactome:R-HSA-164524 NCBI chr12:6,789,528...6,820,799
Ensembl chr12:6,786,858...6,820,799
JBrowse link
G CTSL cathepsin L involved_in IDA (PMID:32855215) UniProt PMID:32855215 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,724,051...87,731,469
JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 involved_in TAS Reactome Reactome:R-HSA-164524 NCBI chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,118,149
JBrowse link
G GAS6 growth arrest specific 6 involved_in IDA (PMID:21501828) UniProt PMID:21501828 NCBI chr13:113,820,549...113,864,076
Ensembl chr13:113,820,549...113,864,076
JBrowse link
G HYAL2 hyaluronidase 2 involved_in IDA (PMID:11296287) UniProt PMID:11296287 NCBI chr 3:50,317,802...50,322,768
Ensembl chr 3:50,317,790...50,322,782
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:12915581)
GO_Central
BHF-UCL
PMID:12915581 PMID:21873635 NCBI chr19:44,846,297...44,889,223
Ensembl chr19:44,846,175...44,889,223
JBrowse link
G PPIA peptidylprolyl isomerase A involved_in TAS Reactome Reactome:R-HSA-164524 NCBI chr 7:44,795,960...44,803,117
Ensembl chr 7:44,796,680...44,824,564
JBrowse link
induction by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr15:39,934,115...40,035,591
Ensembl chr15:39,934,115...40,035,591
JBrowse link
G PHB2 prohibitin 2 involved_in IMP (PMID:32276428) UniProt PMID:32276428 NCBI chr12:6,965,327...6,970,753
Ensembl chr12:6,965,327...6,970,780
JBrowse link
induction by virus of host cell-cell fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD4 CD4 molecule involved_in IDA (PMID:9166430) UniProt PMID:9166430 NCBI chr12:6,789,528...6,820,799
Ensembl chr12:6,786,858...6,820,799
JBrowse link
intracellular transport of viral protein in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNLT1 dynein light chain Tctex-type 1 involved_in IMP (PMID:18647839) UniProt PMID:18647839 NCBI chr 6:158,636,474...158,644,743
Ensembl chr 6:158,636,474...158,644,743
JBrowse link
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 involved_in IDA (PMID:19008854) BHF-UCL PMID:19008854 NCBI chr10:89,392,623...89,406,487
Ensembl chr10:89,392,546...89,406,487
JBrowse link
intracellular transport of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AAAS aladin WD repeat nucleoporin involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr12:53,307,456...53,321,610
Ensembl chr12:53,307,456...53,324,864
JBrowse link
G CD209 CD209 molecule involved_in TAS (PMID:11337487) UniProt PMID:11337487 NCBI chr19:7,739,993...7,747,534
Ensembl chr19:7,739,993...7,747,564
JBrowse link
G CLEC4M C-type lectin domain family 4 member M involved_in TAS (PMID:11337487) UniProt PMID:11337487 NCBI chr19:7,763,243...7,769,605
Ensembl chr19:7,763,210...7,769,605
JBrowse link
G DYNC1I1 dynein cytoplasmic 1 intermediate chain 1 involved_in ISO (PMID:25540360) AgBase PMID:25540360 NCBI chr 7:95,772,554...96,110,322
Ensembl chr 7:95,772,506...96,110,322
JBrowse link
G KPNA1 karyopherin subunit alpha 1 involved_in TAS Reactome Reactome:R-HSA-168297 Reactome:R-HSA-168310 Reactome:R-HSA-168317 Reactome:R-HSA-168337 NCBI chr 3:122,421,902...122,514,939
Ensembl chr 3:122,421,902...122,514,945
JBrowse link
G KPNB1 karyopherin subunit beta 1 involved_in TAS Reactome Reactome:R-HSA-168310 Reactome:R-HSA-168317 Reactome:R-HSA-168337 NCBI chr17:47,649,919...47,685,505
Ensembl chr17:47,649,476...47,685,505
JBrowse link
G MVB12A multivesicular body subunit 12A involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr19:17,405,741...17,425,332
Ensembl chr19:17,405,722...17,433,724
JBrowse link
G MVB12B multivesicular body subunit 12B involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr 9:126,326,829...126,507,040
Ensembl chr 9:126,326,829...126,507,041
JBrowse link
G NDC1 NDC1 transmembrane nucleoporin involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 1:53,765,478...53,838,296
Ensembl chr 1:53,765,478...53,838,463
JBrowse link
G NMT2 N-myristoyltransferase 2 involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr10:15,104,588...15,168,693
Ensembl chr10:15,102,584...15,168,693
JBrowse link
G NUP107 nucleoporin 107 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr12:68,686,971...68,745,809
Ensembl chr12:68,686,951...68,745,809
JBrowse link
G NUP133 nucleoporin 133 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 1:229,440,259...229,508,342
Ensembl chr 1:229,440,259...229,508,341
JBrowse link
G NUP153 nucleoporin 153 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 6:17,615,036...17,706,925
Ensembl chr 6:17,615,035...17,706,925
JBrowse link
G NUP155 nucleoporin 155 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 5:37,288,137...37,371,106
Ensembl chr 5:37,288,137...37,371,106
JBrowse link
G NUP160 nucleoporin 160 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr11:47,778,083...47,848,544
Ensembl chr11:47,778,087...47,848,555
JBrowse link
G NUP188 nucleoporin 188 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 9:128,947,699...129,007,096
Ensembl chr 9:128,947,699...129,007,096
JBrowse link
G NUP205 nucleoporin 205 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 7:135,557,917...135,648,753
Ensembl chr 7:135,557,917...135,648,757
JBrowse link
G NUP210 nucleoporin 210 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 3:13,316,235...13,420,322
Ensembl chr 3:13,316,235...13,420,322
JBrowse link
G NUP214 nucleoporin 214 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 9:131,125,586...131,234,663
Ensembl chr 9:131,125,586...131,234,663
JBrowse link
G NUP35 nucleoporin 35 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 2:183,117,480...183,161,680
Ensembl chr 2:183,117,513...183,161,680
JBrowse link
G NUP37 nucleoporin 37 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr12:102,073,103...102,120,131
Ensembl chr12:102,073,103...102,120,120
JBrowse link
G NUP42 nucleoporin 42 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 7:23,181,298...23,201,011
Ensembl chr 7:23,181,841...23,201,011
JBrowse link
G NUP43 nucleoporin 43 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 6:149,724,315...149,746,529
Ensembl chr 6:149,724,315...149,749,665
JBrowse link
G NUP50 nucleoporin 50 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr22:45,163,925...45,188,017
Ensembl chr22:45,163,925...45,188,017
JBrowse link
G NUP54 nucleoporin 54 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 4:76,114,664...76,148,434
Ensembl chr 4:76,114,659...76,148,444
JBrowse link
G NUP58 nucleoporin 58 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr13:25,301,084...25,349,795
Ensembl chr13:25,301,556...25,349,800
JBrowse link
G NUP62 nucleoporin 62 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr19:49,906,825...49,929,504
Ensembl chr19:49,906,825...49,929,763
JBrowse link
G NUP85 nucleoporin 85 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr17:75,205,557...75,235,758
Ensembl chr17:75,205,659...75,235,758
JBrowse link
G NUP88 nucleoporin 88 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr17:5,384,833...5,419,662
Ensembl chr17:5,360,963...5,419,676
JBrowse link
G NUP93 nucleoporin 93 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr16:56,730,129...56,850,286
Ensembl chr16:56,730,118...56,850,286
JBrowse link
G NUP98 nucleoporin 98 and 96 precursor involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr11:3,675,010...3,797,554
Ensembl chr11:3,671,083...3,797,792
JBrowse link
G POM121 POM121 transmembrane nucleoporin involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 7:72,879,357...72,951,459
Ensembl chr 7:72,879,365...72,951,440
JBrowse link
G POM121C POM121 transmembrane nucleoporin C involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 7:75,416,786...75,486,299
Ensembl chr 7:75,416,786...75,486,299
JBrowse link
G RAE1 ribonucleic acid export 1 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr20:57,351,239...57,379,202
Ensembl chr20:57,351,223...57,379,211
JBrowse link
G RAN RAN, member RAS oncogene family involved_in TAS Reactome Reactome:R-HSA-168880 NCBI chr12:130,871,879...130,877,678
Ensembl chr12:130,872,037...130,877,678
JBrowse link
G RANBP2 RAN binding protein 2 involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 2:108,719,446...108,785,809
Ensembl chr 2:108,719,482...108,785,809
JBrowse link
G RPS27A ribosomal protein S27a involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr 2:55,231,903...55,235,853
Ensembl chr 2:55,231,903...55,235,853
JBrowse link
G SEC13 SEC13 homolog, nuclear pore and COPII coat complex component involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 3:10,300,931...10,321,112
Ensembl chr 3:10,293,131...10,321,112
JBrowse link
G SEH1L SEH1 like nucleoporin involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr18:12,947,988...12,987,665
Ensembl chr18:12,947,133...12,987,536
JBrowse link
G TPR translocated promoter region, nuclear basket protein involved_in TAS Reactome Reactome:R-HSA-1176059 NCBI chr 1:186,311,652...186,375,253
Ensembl chr 1:186,311,652...186,375,693
JBrowse link
G TSG101 tumor susceptibility 101 involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr11:18,480,311...18,526,942
Ensembl chr11:18,468,336...18,526,951
JBrowse link
G UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr19:18,563,766...18,577,550
Ensembl chr19:18,571,730...18,577,550
JBrowse link
G UBAP1 ubiquitin associated protein 1 involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr 9:34,179,005...34,252,523
Ensembl chr 9:34,179,005...34,252,523
JBrowse link
G UBB ubiquitin B involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr17:16,380,779...16,382,745
Ensembl chr17:16,380,798...16,382,745
JBrowse link
G UBC ubiquitin C involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr12:124,911,646...124,914,650
Ensembl chr12:124,911,604...124,917,368
JBrowse link
G VPS28 VPS28 subunit of ESCRT-I involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr 8:144,423,617...144,428,548
Ensembl chr 8:144,423,601...144,428,563
JBrowse link
G VPS37A VPS37A subunit of ESCRT-I involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr 8:17,246,903...17,333,455
Ensembl chr 8:17,246,931...17,302,427
JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr12:122,865,330...122,896,143
Ensembl chr12:122,865,330...122,896,127
JBrowse link
G VPS37C VPS37C subunit of ESCRT-I involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr11:61,130,257...61,161,426
Ensembl chr11:61,130,257...61,161,615
JBrowse link
G VPS37D VPS37D subunit of ESCRT-I involved_in TAS Reactome Reactome:R-HSA-174490 NCBI chr 7:73,665,346...73,672,110
Ensembl chr 7:73,667,831...73,672,112
JBrowse link
G XPO1 exportin 1 involved_in TAS Reactome Reactome:R-HSA-168857 Reactome:R-HSA-168880 NCBI chr 2:61,477,849...61,538,522
Ensembl chr 2:61,476,032...61,538,741
JBrowse link
IRES-dependent viral translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSDE1 cold shock domain containing E1 involved_in IDA (PMID:17947529) FlyBase PMID:17947529 NCBI chr 1:114,716,916...114,757,984
Ensembl chr 1:114,716,913...114,758,676
JBrowse link
G DENR density regulated re-initiation and release factor involved_in IDA (PMID:20713520) UniProt PMID:20713520 NCBI chr12:122,752,824...122,771,064
Ensembl chr12:122,752,824...122,771,064
JBrowse link
G EIF2D eukaryotic translation initiation factor 2D involved_in IDA (PMID:20713520) UniProt PMID:20713520 NCBI chr 1:206,572,484...206,612,466
Ensembl chr 1:206,571,292...206,612,465
JBrowse link
G EIF3A eukaryotic translation initiation factor 3 subunit A involved_in IDA (PMID:23766293), (PMID:24357634), (PMID:9573242) UniProt PMID:9573242 PMID:23766293 PMID:24357634 NCBI chr10:119,033,670...119,080,817
Ensembl chr10:119,033,670...119,080,823
JBrowse link
G EIF3B eukaryotic translation initiation factor 3 subunit B involved_in IDA (PMID:9573242) UniProt PMID:9573242 NCBI chr 7:2,354,086...2,380,745
Ensembl chr 7:2,354,086...2,380,745
JBrowse link
G EIF3D eukaryotic translation initiation factor 3 subunit D involved_in IDA (PMID:9573242) UniProt PMID:9573242 NCBI chr22:36,510,855...36,529,166
Ensembl chr22:36,510,855...36,529,184
JBrowse link
G EIF3F eukaryotic translation initiation factor 3 subunit F involved_in IDA (PMID:9573242) UniProt PMID:9573242 NCBI chr11:7,987,337...8,001,852
Ensembl chr11:7,970,251...8,001,862
JBrowse link
G MCTS1 MCTS1 re-initiation and release factor involved_in IDA (PMID:20713520) UniProt PMID:20713520 NCBI chr  X:120,604,101...120,621,159
Ensembl chr  X:120,594,010...120,621,159
JBrowse link
G PCBP2 poly(rC) binding protein 2 involved_in IDA (PMID:12414943) UniProt PMID:12414943 NCBI chr12:53,452,102...53,481,162
Ensembl chr12:53,452,102...53,481,162
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 involved_in IMP
IDA
(PMID:21518806)
(PMID:17947529)
UniProt
FlyBase
PMID:17947529 PMID:21518806 NCBI chr19:797,452...812,316
Ensembl chr19:797,075...812,327
JBrowse link
G SSB small RNA binding exonuclease protection factor La involved_in IDA (PMID:12384597) UniProt PMID:12384597 NCBI chr 2:169,798,871...169,812,064
Ensembl chr 2:169,791,933...169,812,064
JBrowse link
late viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNT2 cyclin T2 involved_in IDA (PMID:21509660) UniProt PMID:21509660 NCBI chr 2:134,918,810...134,959,342
Ensembl chr 2:134,918,235...134,959,342
JBrowse link
G MON1B MON1 homolog B, secretory trafficking associated involved_in IDA (PMID:21509660) UniProt PMID:21509660 NCBI chr16:77,191,190...77,202,398
Ensembl chr16:77,190,835...77,202,398
JBrowse link
G USF1 upstream transcription factor 1 involved_in IDA (PMID:2249772) BHF-UCL PMID:2249772 NCBI chr 1:161,039,251...161,045,977
Ensembl chr 1:161,039,251...161,045,977
JBrowse link
G USF2 upstream transcription factor 2, c-fos interacting involved_in IC (PMID:8576131) BHF-UCL PMID:8576131 NCBI chr19:35,268,962...35,279,821
Ensembl chr19:35,268,962...35,279,821
JBrowse link
microtubule-dependent intracellular transport of viral material towards nucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DYNLT1 dynein light chain Tctex-type 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:158,636,474...158,644,743
Ensembl chr 6:158,636,474...158,644,743
JBrowse link
mitigation of host immune response by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in TAS Reactome Reactome:R-HSA-168896 NCBI chr 2:37,099,210...37,157,065
Ensembl chr 2:37,099,210...37,157,522
JBrowse link
G SCRIB scribble planar cell polarity protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:143,790,925...143,815,773
Ensembl chr 8:143,790,920...143,815,773
JBrowse link
modification by virus of host mRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPSF4 cleavage and polyadenylation specific factor 4 involved_in TAS Reactome Reactome:R-HSA-168859 NCBI chr 7:99,438,912...99,457,373
Ensembl chr 7:99,438,922...99,457,373
JBrowse link
G PABPN1 poly(A) binding protein nuclear 1 involved_in TAS Reactome Reactome:R-HSA-168883 NCBI chr14:23,321,457...23,326,163
Ensembl chr14:23,321,457...23,326,163
JBrowse link
modulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IFI27 interferon alpha inducible protein 27 involved_in IMP (PMID:27777077) UniProt PMID:27777077 NCBI chr14:94,110,736...94,116,690
Ensembl chr14:94,104,836...94,116,698
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBXL2 F-box and leucine rich repeat protein 2 involved_in IMP (PMID:15893726) UniProt PMID:15893726 NCBI chr 3:33,277,025...33,422,698
Ensembl chr 3:33,277,025...33,403,662
JBrowse link
G FMR1 FMRP translational regulator 1 involved_in IMP (PMID:24514761) UniProt PMID:24514761 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,919...147,951,125
JBrowse link
G PHB prohibitin involved_in ISS UniProt GO_REF:0000024 NCBI chr17:49,404,052...49,414,882
Ensembl chr17:49,404,052...49,414,901
JBrowse link
G VAPB VAMP associated protein B and C involved_in IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IGI (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:205,712,822...205,750,220
Ensembl chr 1:205,712,822...205,750,182
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PSMC3 proteasome 26S subunit, ATPase 3 involved_in IDA (PMID:2194290), (PMID:8419915) GO_Central PMID:2194290 PMID:8419915 NCBI chr11:47,418,775...47,426,473
Ensembl chr11:47,418,769...47,426,473
JBrowse link
modulation by virus of host cellular process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP8 caspase 8 involved_in TAS Reactome Reactome:R-HSA-9687458 NCBI chr 2:201,233,443...201,287,711
Ensembl chr 2:201,233,443...201,287,711
JBrowse link
G KPNA1 karyopherin subunit alpha 1 involved_in TAS Reactome Reactome:R-HSA-168276 NCBI chr 3:122,421,902...122,514,939
Ensembl chr 3:122,421,902...122,514,945
JBrowse link
G KPNA2 karyopherin subunit alpha 2 involved_in TAS Reactome Reactome:R-HSA-168276 NCBI chr17:68,035,735...68,046,854
Ensembl chr17:68,035,636...68,047,364
JBrowse link
G KPNA3 karyopherin subunit alpha 3 involved_in TAS Reactome Reactome:R-HSA-168276 NCBI chr13:49,699,307...49,792,682
Ensembl chr13:49,699,320...49,792,682
JBrowse link
G KPNA4 karyopherin subunit alpha 4 involved_in TAS Reactome Reactome:R-HSA-168276 NCBI chr 3:160,495,007...160,565,571
Ensembl chr 3:160,495,007...160,565,571
JBrowse link
G KPNA5 karyopherin subunit alpha 5 involved_in TAS Reactome Reactome:R-HSA-168276 NCBI chr 6:116,677,643...116,741,867
Ensembl chr 6:116,681,187...116,741,867
JBrowse link
G KPNA7 karyopherin subunit alpha 7 involved_in TAS Reactome Reactome:R-HSA-168276 NCBI chr 7:99,145,467...99,219,417
Ensembl chr 7:99,173,572...99,250,075
JBrowse link
G KPNB1 karyopherin subunit beta 1 involved_in TAS Reactome Reactome:R-HSA-168276 NCBI chr17:47,649,919...47,685,505
Ensembl chr17:47,649,476...47,685,505
JBrowse link
G MLKL mixed lineage kinase domain like pseudokinase involved_in TAS Reactome Reactome:R-HSA-9698677 NCBI chr16:74,671,855...74,700,889
Ensembl chr16:74,671,855...74,700,960
JBrowse link
G RIPK1 receptor interacting serine/threonine kinase 1 involved_in TAS Reactome Reactome:R-HSA-9686336 Reactome:R-HSA-9687465 NCBI chr 6:3,063,967...3,115,187
Ensembl chr 6:3,063,824...3,115,187
JBrowse link
G RIPK3 receptor interacting serine/threonine kinase 3 involved_in TAS Reactome Reactome:R-HSA-9686336 Reactome:R-HSA-9687455 NCBI chr14:24,336,025...24,339,991
Ensembl chr14:24,336,025...24,340,022
JBrowse link
modulation by virus of host process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD209 CD209 molecule involved_in TAS (PMID:11337487) UniProt PMID:11337487 NCBI chr19:7,739,993...7,747,534
Ensembl chr19:7,739,993...7,747,564
JBrowse link
G CLEC4M C-type lectin domain family 4 member M involved_in TAS (PMID:11337487) UniProt PMID:11337487 NCBI chr19:7,763,243...7,769,605
Ensembl chr19:7,763,210...7,769,605
JBrowse link
G DAG1 dystroglycan 1 involved_in IDA (PMID:16254364) UniProt PMID:16254364 NCBI chr 3:49,468,703...49,535,618
Ensembl chr 3:49,468,703...49,535,618
JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in NAS (PMID:14990717) UniProt PMID:14990717 NCBI chr 7:139,561,570...139,777,998
Ensembl chr 7:139,561,570...139,777,998
JBrowse link
G RRAGA Ras related GTP binding A involved_in IDA (PMID:8995684) UniProt PMID:8995684 NCBI chr 9:19,049,427...19,051,025
Ensembl chr 9:19,049,427...19,051,025
JBrowse link
G RXRA retinoid X receptor alpha involved_in IDA (PMID:11915042) UniProt PMID:11915042 NCBI chr 9:134,326,455...134,440,585
Ensembl chr 9:134,317,098...134,440,585
JBrowse link
G TYMS thymidylate synthetase involved_in IEA
ISO
Ensembl
RGD
PMID:1247599 GO_REF:0000107 RGD:2317429 NCBI chr18:657,653...673,578
Ensembl chr18:657,653...673,578
JBrowse link
G VAPB VAMP associated protein B and C involved_in IDA (PMID:16227268) UniProt PMID:16227268 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
modulation by virus of host transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NTRK3 neurotrophic receptor tyrosine kinase 3 involved_in IEA
ISO
Ensembl
RGD
PMID:11175319 GO_REF:0000107 RGD:2325644 NCBI chr15:87,859,749...88,256,796
Ensembl chr15:87,859,751...88,256,768
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCL8 C-C motif chemokine ligand 8 involved_in IDA (PMID:20181935) ARUK-UCL PMID:20181935 NCBI chr17:34,319,435...34,321,402
Ensembl chr17:34,319,435...34,321,402
JBrowse link
G CCNK cyclin K involved_in IDA (PMID:21555514) CACAO PMID:21555514 NCBI chr14:99,481,409...99,512,440
Ensembl chr14:99,481,169...99,535,044
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chr19:42,507,306...42,528,482
Ensembl chr19:42,507,304...42,561,234
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in ISO (PMID:24380861) AgBase PMID:24380861 NCBI chr  X:41,333,308...41,364,472
Ensembl chr  X:41,333,348...41,364,472
JBrowse link
G EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr15:39,934,115...40,035,591
Ensembl chr15:39,934,115...40,035,591
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IDA (PMID:25244949) AgBase PMID:25244949 NCBI chr 6:161,347,417...162,727,802
Ensembl chr 6:161,347,417...162,727,775
JBrowse link
G VAPA VAMP associated protein A involved_in IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr18:9,914,016...9,960,021
Ensembl chr18:9,914,016...9,960,021
JBrowse link
G VAPB VAMP associated protein B and C involved_in IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
G ZBED1 zinc finger BED-type containing 1 involved_in IDA (PMID:25210186) UniProt PMID:25210186 NCBI chr  X:2,486,435...2,500,976
NCBI chr  Y:2,486,435...2,500,976
Ensembl chr  X:2,486,414...2,500,976
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IDA (PMID:23355615) UniProt PMID:23355615 NCBI chr 1:37,474,518...37,484,377
Ensembl chr 1:37,474,580...37,484,377
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum involved_in IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:159,587,826...159,588,865
Ensembl chr 1:159,587,826...159,588,865
JBrowse link
G PTX3 pentraxin 3 involved_in IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:157,436,850...157,443,633
Ensembl chr 3:157,436,850...157,443,633
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:159,587,826...159,588,865
Ensembl chr 1:159,587,826...159,588,865
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:2148352|PMID:11483763)
(MGI:3848729|PMID:19358828)
(MGI:1098064|PMID:9343248)
MGI PMID:9343248 PMID:11483763 PMID:19358828 MGI:1098064 MGI:2148352 MGI:3848729 NCBI chr19:42,507,306...42,528,482
Ensembl chr19:42,507,304...42,561,234
JBrowse link
G CRP C-reactive protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:159,712,289...159,714,589
Ensembl chr 1:159,712,289...159,714,589
JBrowse link
G LTF lactotransferrin involved_in IMP (PMID:12522210) AgBase PMID:12522210 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234
JBrowse link
G PTX3 pentraxin 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:157,436,850...157,443,633
Ensembl chr 3:157,436,850...157,443,633
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VAPB VAMP associated protein B and C involved_in IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRD4 bromodomain containing 4 involved_in IDA (PMID:17690245) FlyBase PMID:17690245 NCBI chr19:15,235,519...15,332,539
Ensembl chr19:15,235,519...15,332,545
JBrowse link
G CCL3 C-C motif chemokine ligand 3 involved_in IDA (PMID:10841574) UniProt PMID:10841574 NCBI chr17:36,088,256...36,090,143
Ensembl chr17:36,088,256...36,090,169
JBrowse link
G CCL4 C-C motif chemokine ligand 4 involved_in IDA (PMID:10841574) UniProt PMID:10841574 NCBI chr17:36,103,827...36,105,614
Ensembl chr17:36,103,827...36,105,621
JBrowse link
G CCL4L1 C-C motif chemokine ligand 4 like 1 involved_in IDA (PMID:10841574) UniProt PMID:10841574 Ensembl chr17:36,210,924...36,212,878 JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in IDA (PMID:10841574) UniProt PMID:10841574 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G HDAC1 histone deacetylase 1 involved_in IMP (PMID:16540471) UniProt PMID:16540471 NCBI chr 1:32,292,083...32,333,628
Ensembl chr 1:32,292,083...32,333,635
JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IDA (PMID:17005673) UniProt PMID:17005673 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G HMOX1 heme oxygenase 1 involved_in ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,214
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IDA (PMID:18774950) UniProt PMID:18774950 NCBI chr17:1,494,575...1,516,735
Ensembl chr17:1,494,577...1,516,742
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit involved_in IDA (PMID:2833704) UniProt PMID:2833704 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048
JBrowse link
G POU2F3 POU class 2 homeobox 3 involved_in IDA (PMID:14645924) UniProt PMID:14645924 NCBI chr11:120,236,638...120,319,945
Ensembl chr11:120,236,640...120,319,945
JBrowse link
G REST RE1 silencing transcription factor involved_in IDA (PMID:17555596) UniProt PMID:17555596 NCBI chr 4:56,907,900...56,935,847
Ensembl chr 4:56,907,876...56,966,808
JBrowse link
G TARDBP TAR DNA binding protein involved_in IDA (PMID:7745706) BHF-UCL PMID:7745706 NCBI chr 1:11,012,654...11,030,528
Ensembl chr 1:11,012,344...11,030,528
JBrowse link
G TFAP4 transcription factor AP-4 involved_in NAS
IDA
(PMID:7933101)
(PMID:14645924), (PMID:16540471)
UniProt PMID:7933101 PMID:14645924 PMID:16540471 NCBI chr16:4,257,186...4,273,023
Ensembl chr16:4,257,186...4,273,075
JBrowse link
G ZNF639 zinc finger protein 639 involved_in IMP (PMID:20484494) UniProt PMID:20484494 NCBI chr 3:179,322,876...179,338,583
Ensembl chr 3:179,323,031...179,338,583
JBrowse link
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STAT1 signal transducer and activator of transcription 1 involved_in IMP (PMID:15825084) AgBase PMID:15825084 NCBI chr 2:190,968,989...191,014,197
Ensembl chr 2:190,908,460...191,020,960
JBrowse link
G VAPB VAMP associated protein B and C involved_in IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BST2 bone marrow stromal cell antigen 2 involved_in IDA (PMID:19036818), (PMID:20686043), (PMID:20943977) UniProt PMID:19036818 PMID:20686043 PMID:20943977 NCBI chr19:17,402,939...17,405,630
Ensembl chr19:17,402,939...17,405,630
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in ISO (PMID:20167191) AgBase PMID:20167191 NCBI chr21:41,420,329...41,459,214
Ensembl chr21:41,420,020...41,470,071
JBrowse link
G TRIM15 tripartite motif containing 15 involved_in IMP (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:30,163,546...30,172,693
Ensembl chr 6:30,163,206...30,172,693
JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:8,602,170...8,612,970
Ensembl chr12:8,602,170...8,612,867
JBrowse link
G APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:38,957,609...38,963,184
Ensembl chr22:38,952,741...38,992,778
JBrowse link
G APOBEC3A_B APOBEC3A and APOBEC3B deletion hybrid involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr22:38,952,741...38,992,778 JBrowse link
G APOBEC3B apolipoprotein B mRNA editing enzyme catalytic subunit 3B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:38,982,347...38,992,779
Ensembl chr22:38,982,347...38,992,804
JBrowse link
G APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:39,014,236...39,020,352
Ensembl chr22:39,014,257...39,020,352
JBrowse link
G APOBEC3D apolipoprotein B mRNA editing enzyme catalytic subunit 3D involved_in IBA
IDA
(PMID:21873635)
(PMID:21835787)
GO_Central
UniProt
PMID:21835787 PMID:21873635 NCBI chr22:39,021,127...39,033,277
Ensembl chr22:39,021,113...39,033,277
JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F involved_in IDA
IBA
(PMID:17121840), (PMID:21835787)
(PMID:21873635)
UniProt
GO_Central
PMID:17121840 PMID:21835787 PMID:21873635 NCBI chr22:39,019,081...39,055,972
Ensembl chr22:39,040,604...39,055,972
JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G involved_in IBA
IDA
(PMID:21873635)
(PMID:16571802), (PMID:17121840), (PMID:21835787)
GO_Central
UniProt
PMID:16571802 PMID:17121840 PMID:21835787 PMID:21873635 NCBI chr22:39,077,005...39,087,743
Ensembl chr22:39,077,067...39,087,743
JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H involved_in IDA
IBA
(PMID:18779051), (PMID:21835787)
(PMID:21873635)
UniProt
GO_Central
PMID:18779051 PMID:21835787 PMID:21873635 NCBI chr22:39,097,203...39,104,067
Ensembl chr22:39,097,224...39,104,067
JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in IDA (PMID:17005673) UniProt PMID:17005673 NCBI chr12:65,824,460...65,966,291
Ensembl chr12:65,824,460...65,966,291
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IDA (PMID:18774950) UniProt PMID:18774950 NCBI chr17:1,494,575...1,516,735
Ensembl chr17:1,494,577...1,516,742
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 involved_in ISS
IMP
(PMID:29211708) UniProt PMID:29211708 GO_REF:0000024 NCBI chr22:30,925,130...30,968,774
Ensembl chr22:30,925,130...30,968,774
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 involved_in IMP (PMID:29211708) UniProt PMID:29211708 NCBI chr13:19,633,648...19,673,441
Ensembl chr13:19,633,659...19,673,441
JBrowse link
G RESF1 retroelement silencing factor 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr12:31,959,415...31,993,107
Ensembl chr12:31,959,370...31,993,107
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:150,926,263...150,964,737
Ensembl chr 1:150,926,263...150,964,744
JBrowse link
G TASOR transcription activation suppressor involved_in IMP (PMID:29211708) UniProt PMID:29211708 NCBI chr 3:56,620,132...56,683,265
Ensembl chr 3:56,620,132...56,683,265
JBrowse link
G TRIM28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3842857|PMID:19270682) Ensembl
MGI
PMID:19270682 GO_REF:0000107 MGI:3842857 NCBI chr19:58,544,064...58,550,722
Ensembl chr19:58,544,064...58,550,722
JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FBLN1 fibulin 1 involved_in IMP (PMID:12200142) UniProt PMID:12200142 NCBI chr22:45,502,883...45,601,135
Ensembl chr22:45,502,238...45,601,135
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum involved_in IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:159,587,826...159,588,865
Ensembl chr 1:159,587,826...159,588,865
JBrowse link
G CD74 CD74 molecule involved_in IDA (PMID:32855215) UniProt PMID:32855215 NCBI chr 5:150,401,637...150,412,910
Ensembl chr 5:150,400,041...150,412,969
JBrowse link
G CIITA class II major histocompatibility complex transactivator involved_in IDA (PMID:32855215) UniProt PMID:32855215 NCBI chr16:10,866,208...10,941,562
Ensembl chr16:10,866,222...10,943,021
JBrowse link
G FCN1 ficolin 1 involved_in IDA (PMID:22851708) UniProt PMID:22851708 NCBI chr 9:134,903,232...134,917,912
Ensembl chr 9:134,903,232...134,917,912
JBrowse link
G FCN3 ficolin 3 involved_in IMP (PMID:22851708) UniProt PMID:22851708 NCBI chr 1:27,369,110...27,374,852
Ensembl chr 1:27,369,110...27,374,824
JBrowse link
G GSN gelsolin involved_in IMP (PMID:23575248) UniProt PMID:23575248 NCBI chr 9:121,201,483...121,332,844
Ensembl chr 9:121,207,794...121,332,843
JBrowse link
G IFITM1 interferon induced transmembrane protein 1 involved_in
acts_upstream_of_or_within
IBA
IDA
ISO
(PMID:21873635)
(PMID:21253575), (PMID:23358889), (PMID:26354436)
(MGI:5780029|PMID:25738301)
GO_Central
UniProt
MGI
PMID:21253575 PMID:21873635 PMID:23358889 PMID:25738301 PMID:26354436 MGI:5780029 NCBI chr11:314,040...315,272
Ensembl chr11:310,041...315,272
JBrowse link
G IFITM2 interferon induced transmembrane protein 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:21253575), (PMID:23358889), (PMID:26354436), (PMID:33563656)
GO_Central
UniProt
PMID:21253575 PMID:21873635 PMID:23358889 PMID:26354436 PMID:33563656 NCBI chr11:307,816...309,395
Ensembl chr11:303,655...309,397
JBrowse link
G IFITM3 interferon induced transmembrane protein 3 involved_in IMP
IDA
IBA
(PMID:23358889)
(PMID:20943977), (PMID:21253575), (PMID:26354436)
(PMID:21873635)
CACAO
UniProt
GO_Central
PMID:20943977 PMID:21253575 PMID:21873635 PMID:23358889 PMID:26354436 NCBI chr11:319,676...320,860
Ensembl chr11:319,676...329,475
JBrowse link
G IFNA2 interferon alpha 2 involved_in IDA (PMID:22783022) BHF-UCL PMID:22783022 NCBI chr 9:21,384,255...21,385,398
Ensembl chr 9:21,384,255...21,385,398
JBrowse link
G LY6E lymphocyte antigen 6 family member E involved_in IDA (PMID:32641482), (PMID:32704094) UniProt PMID:32641482 PMID:32704094 NCBI chr 8:143,018,529...143,022,409
Ensembl chr 8:143,017,982...143,023,832
JBrowse link
G MID2 midline 2 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr  X:107,825,735...107,931,637
Ensembl chr  X:107,825,755...107,931,637
JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:22850678 RGD:8693392 NCBI chr11:94,415,570...94,512,701
Ensembl chr11:94,415,570...94,493,885
JBrowse link
G NBN nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chr 8:89,933,331...89,984,698
Ensembl chr 8:89,933,331...90,003,228
JBrowse link
G PTX3 pentraxin 3 involved_in IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 3:157,436,850...157,443,633
Ensembl chr 3:157,436,850...157,443,633
JBrowse link
G RAD50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chr 5:132,556,977...132,646,349
Ensembl chr 5:132,556,019...132,646,349
JBrowse link
G SNX3 sorting nexin 3 involved_in IDA (PMID:18767904) UniProt PMID:18767904 NCBI chr 6:108,211,222...108,261,040
Ensembl chr 6:108,211,222...108,261,246
JBrowse link
G TRIM10 tripartite motif containing 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:30,151,939...30,163,216
Ensembl chr 6:30,151,943...30,161,211
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IMP (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:228,393,672...228,406,835
Ensembl chr 1:228,393,673...228,406,835
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:56,887,909...56,914,049
Ensembl chr17:56,836,387...56,914,080
JBrowse link
G TRIM26 tripartite motif containing 26 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:30,184,453...30,213,435
Ensembl chr 6:30,184,455...30,213,427
JBrowse link
G TRIM31 tripartite motif containing 31 involved_in IMP (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:30,102,892...30,113,090
Ensembl chr 6:30,102,897...30,113,090
JBrowse link
G TRIM5 tripartite motif containing 5 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr11:5,590,906...5,685,108
Ensembl chr11:5,663,195...5,938,619
JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 7:101,085,424...101,097,967
Ensembl chr 7:101,085,481...101,097,967
JBrowse link
G TRIM59 tripartite motif containing 59 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:160,435,503...160,449,786
Ensembl chr 3:160,432,445...160,485,773
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:102,644,479...102,658,319
Ensembl chr10:102,644,479...102,658,318
JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific acts_upstream_of_or_within ISO (MGI:4939544|PMID:21173229) MGI PMID:21173229 MGI:4939544 NCBI chr 1:154,582,057...154,627,997
Ensembl chr 1:154,581,695...154,628,013
JBrowse link
G APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A involved_in IDA (PMID:16527742) UniProt PMID:16527742 NCBI chr22:38,957,609...38,963,184
Ensembl chr22:38,952,741...38,992,778
JBrowse link
G APOBEC3A_B APOBEC3A and APOBEC3B deletion hybrid involved_in IDA (PMID:16527742) UniProt PMID:16527742 Ensembl chr22:38,952,741...38,992,778 JBrowse link
G APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C involved_in IDA (PMID:21632763) UniProt PMID:21632763 NCBI chr22:39,014,236...39,020,352
Ensembl chr22:39,014,257...39,020,352
JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F involved_in IDA (PMID:16378963), (PMID:17121840) BHF-UCL PMID:16378963 PMID:17121840 NCBI chr22:39,019,081...39,055,972
Ensembl chr22:39,040,604...39,055,972
JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G involved_in IDA (PMID:16378963), (PMID:17121840) UniProt PMID:16378963 PMID:17121840 NCBI chr22:39,077,005...39,087,743
Ensembl chr22:39,077,067...39,087,743
JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H involved_in ISO (MGI:5486557|PMID:16378963) UniProt PMID:16378963 MGI:5486557 NCBI chr22:39,097,203...39,104,067
Ensembl chr22:39,097,224...39,104,067
JBrowse link
G BANF1 BAF nuclear assembly factor 1 involved_in IDA (PMID:18005698) UniProt PMID:18005698 NCBI chr11:66,002,079...66,004,149
Ensembl chr11:66,002,228...66,004,149
JBrowse link
G BST2 bone marrow stromal cell antigen 2 involved_in IDA (PMID:20943977) UniProt PMID:20943977 NCBI chr19:17,402,939...17,405,630
Ensembl chr19:17,402,939...17,405,630
JBrowse link
G BTBD17 BTB domain containing 17 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:74,356,416...74,363,655
Ensembl chr17:74,356,416...74,361,868
JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in IDA (PMID:10490959) BHF-UCL PMID:10490959 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in IMP (PMID:19189853), (PMID:19840259) UniProt PMID:19189853 PMID:19840259 NCBI chr 2:37,099,210...37,157,065
Ensembl chr 2:37,099,210...37,157,522
JBrowse link
G FAM111A FAM111 trypsin like peptidase A involved_in IMP (PMID:23093934) UniProt PMID:23093934 NCBI chr11:59,142,856...59,155,039
Ensembl chr11:59,142,748...59,155,039
JBrowse link
G IFI16 interferon gamma inducible protein 16 involved_in IDA (PMID:22291595) UniProt PMID:22291595 NCBI chr 1:158,999,976...159,055,151
Ensembl chr 1:158,999,968...159,055,155
JBrowse link
G IFIH1 interferon induced with helicase C domain 1 involved_in IDA (PMID:33727702) UniProt PMID:33727702 NCBI chr 2:162,267,074...162,318,684
Ensembl chr 2:162,267,074...162,318,684
JBrowse link
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 involved_in IMP (PMID:19008854), (PMID:21976647) UniProt PMID:19008854 PMID:21976647 NCBI chr10:89,392,623...89,406,487
Ensembl chr10:89,392,546...89,406,487
JBrowse link
G IFIT5 interferon induced protein with tetratricopeptide repeats 5 involved_in IDA (PMID:23774268) UniProt PMID:23774268 NCBI chr10:89,414,568...89,420,997
Ensembl chr10:89,414,568...89,421,605
JBrowse link
G IFITM1 interferon induced transmembrane protein 1 involved_in IBA
IDA
IMP
(PMID:21873635)
(PMID:21253575)
(PMID:21976647)
GO_Central
UniProt
PMID:21253575 PMID:21873635 PMID:21976647 NCBI chr11:314,040...315,272
Ensembl chr11:310,041...315,272
JBrowse link
G IFITM2 interferon induced transmembrane protein 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:21253575)
GO_Central
UniProt
PMID:21253575 PMID:21873635 NCBI chr11:307,816...309,395
Ensembl chr11:303,655...309,397
JBrowse link
G IFITM3 interferon induced transmembrane protein 3 involved_in IDA
IBA
(PMID:20943977), (PMID:21253575)
(PMID:21873635)
UniProt
GO_Central
PMID:20943977 PMID:21253575 PMID:21873635 NCBI chr11:319,676...320,860
Ensembl chr11:319,676...329,475
JBrowse link
G IFNB1 interferon beta 1 involved_in IDA (PMID:19008854) BHF-UCL PMID:19008854 NCBI chr 9:21,077,104...21,077,942
Ensembl chr 9:21,077,104...21,077,942
JBrowse link
G IFNL3 interferon lambda 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:39,243,455...39,245,250
Ensembl chr19:39,243,553...39,245,129
JBrowse link
G ILF3 interleukin enhancer binding factor 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:10,654,346...10,692,400
Ensembl chr19:10,654,261...10,692,417
JBrowse link
G ISG15 ISG15 ubiquitin like modifier involved_in IMP
IDA
(PMID:19357168)
(PMID:33727702)
UniProt PMID:19357168 PMID:33727702 NCBI chr 1:1,013,497...1,014,540
Ensembl chr 1:1,001,138...1,014,540
JBrowse link
G ISG20 interferon stimulated exonuclease gene 20 involved_in IBA
IMP
(PMID:21873635)
(PMID:21036379)
GO_Central
UniProt
PMID:21036379 PMID:21873635 NCBI chr15:88,635,614...88,656,483
Ensembl chr15:88,635,670...88,656,483
JBrowse link
G LTF lactotransferrin involved_in IMP (PMID:25193851) AgBase PMID:25193851 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234
JBrowse link
G MAVS mitochondrial antiviral signaling protein involved_in IDA (PMID:20451243) UniProt PMID:20451243 NCBI chr20:3,846,834...3,876,118
Ensembl chr20:3,846,799...3,876,123
JBrowse link
G MX1 MX dynamin like GTPase 1 involved_in IDA (PMID:14687945), (PMID:15047845), (PMID:16202617) UniProt PMID:14687945 PMID:15047845 PMID:16202617 NCBI chr21:41,420,329...41,459,214
Ensembl chr21:41,420,020...41,470,071
JBrowse link
G N4BP1 NEDD4 binding protein 1 involved_in IDA (PMID:31133753) UniProt PMID:31133753 NCBI chr16:48,538,726...48,610,214
Ensembl chr16:48,538,726...48,620,148
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 involved_in IBA
IDA
(PMID:21873635)
(PMID:18931074), (PMID:19923450), (PMID:23196181)
GO_Central
UniProt
PMID:18931074 PMID:19923450 PMID:21873635 PMID:23196181 NCBI chr12:112,906,956...112,933,219
Ensembl chr12:112,905,856...112,933,219
JBrowse link
G OAS2 2'-5'-oligoadenylate synthetase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:112,978,466...113,011,723
Ensembl chr12:112,978,395...113,011,723
JBrowse link
G OAS3 2'-5'-oligoadenylate synthetase 3 involved_in IBA
IDA
(PMID:21873635)
(PMID:19056102), (PMID:19923450), (PMID:23196181)
GO_Central
UniProt
PMID:19056102 PMID:19923450 PMID:21873635 PMID:23196181 NCBI chr12:112,938,463...112,973,251
Ensembl chr12:112,938,051...112,976,460
JBrowse link
G OASL 2'-5'-oligoadenylate synthetase like involved_in IBA
IDA
(PMID:21873635)
(PMID:18931074), (PMID:20074559)
GO_Central
UniProt
PMID:18931074 PMID:20074559 PMID:21873635 NCBI chr12:121,018,882...121,039,242
Ensembl chr12:121,017,763...121,039,242
JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 involved_in IMP (PMID:22176891) UniProt PMID:22176891 NCBI chr 8:143,977,158...143,986,460
Ensembl chr 8:143,977,153...144,012,772
JBrowse link
G PLSCR1 phospholipid scramblase 1 involved_in IMP (PMID:15308695) UniProt PMID:15308695 NCBI chr 3:146,515,178...146,544,805
Ensembl chr 3:146,515,180...146,544,856
JBrowse link
G PROX1 prospero homeobox 1 involved_in IDA (PMID:19264593) BHF-UCL PMID:19264593 NCBI chr 1:213,983,239...214,041,510
Ensembl chr 1:213,983,181...214,041,510
JBrowse link
G RNASEL ribonuclease L involved_in IBA
IDA
(PMID:21873635)
(PMID:19923450), (PMID:23196181)
GO_Central
UniProt
PMID:19923450 PMID:21873635 PMID:23196181 NCBI chr 1:182,573,634...182,589,285
Ensembl chr 1:182,573,634...182,589,256
JBrowse link
G RSAD2 radical S-adenosyl methionine domain containing 2 involved_in IDA (PMID:21957124) UniProt PMID:21957124 NCBI chr 2:6,865,733...6,898,239
Ensembl chr 2:6,865,557...6,898,239
JBrowse link
G SHFL shiftless antiviral inhibitor of ribosomal frameshifting involved_in IMP (PMID:26735137) UniProt PMID:26735137 NCBI chr19:10,086,119...10,093,249
Ensembl chr19:10,086,122...10,093,252
JBrowse link
G SLPI secretory leukocyte peptidase inhibitor involved_in IDA (PMID:19333378) UniProt PMID:19333378 NCBI chr20:45,252,239...45,254,564
Ensembl chr20:45,252,239...45,254,564
JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IDA (PMID:12417631) BHF-UCL PMID:12417631 NCBI chr 6:35,832,966...35,921,098
Ensembl chr 6:35,832,966...35,921,342
JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IDA (PMID:12417631) BHF-UCL PMID:12417631 NCBI chr 7:105,110,708...105,399,363
Ensembl chr 7:105,110,704...105,399,308
JBrowse link
G TNF tumor necrosis factor involved_in IDA (PMID:10490959) BHF-UCL PMID:10490959 NCBI chr 6:31,575,565...31,578,336
Ensembl chr 6:31,575,565...31,578,336
JBrowse link
G TNIP1 TNFAIP3 interacting protein 1 involved_in TAS (PMID:9923610) UniProt PMID:9923610 NCBI chr 5:151,029,943...151,087,685
Ensembl chr 5:151,029,945...151,093,577
JBrowse link
G TRIM6 tripartite motif containing 6 involved_in IMP (PMID:24882218) UniProt PMID:24882218 NCBI chr11:5,596,111...5,612,952
Ensembl chr11:5,596,109...5,612,958
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 involved_in IDA (PMID:21102435), (PMID:21876179) UniProt PMID:21102435 PMID:21876179 NCBI chr 7:139,043,515...139,109,720
Ensembl chr 7:139,043,515...139,132,122
JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 involved_in ISO (PMID:25086213) AgBase PMID:25086213 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,214
JBrowse link
G IL32 interleukin 32 acts_upstream_of IDA (PMID:23729669) ARUK-UCL PMID:23729669 NCBI chr16:3,065,403...3,069,530
Ensembl chr16:3,065,297...3,082,192
JBrowse link
G PPIA peptidylprolyl isomerase A involved_in IMP (PMID:19207730), (PMID:22347431) UniProt PMID:19207730 PMID:22347431 NCBI chr 7:44,795,960...44,803,117
Ensembl chr 7:44,796,680...44,824,564
JBrowse link
negative regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APCS amyloid P component, serum involved_in IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr 1:159,587,826...159,588,865
Ensembl chr 1:159,587,826...159,588,865
JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F involved_in IDA (PMID:17121840) HGNC-UCL PMID:17121840 NCBI chr22:39,019,081...39,055,972
Ensembl chr22:39,040,604...39,055,972
JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G involved_in IDA (PMID:17121840) HGNC-UCL PMID:17121840 NCBI chr22:39,077,005...39,087,743
Ensembl chr22:39,077,067...39,087,743
JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H involved_in IMP (PMID:18827027) UniProt PMID:18827027 NCBI chr22:39,097,203...39,104,067
Ensembl chr22:39,097,224...39,104,067
JBrowse link
G CREBBP CREB binding protein involved_in ISO (MGI:2151262|PMID:11583620) CAFA PMID:11583620 MGI:2151262 NCBI chr16:3,725,054...3,880,727
Ensembl chr16:3,725,054...3,880,713
JBrowse link
G LTF lactotransferrin involved_in IMP (PMID:25193851) AgBase PMID:25193851 NCBI chr 3:46,435,645...46,485,234
Ensembl chr 3:46,435,645...46,485,234
JBrowse link
G MBL2 mannose binding lectin 2 involved_in IDA (PMID:23544079) BHF-UCL PMID:23544079 NCBI chr10:52,765,380...52,772,784
Ensembl chr10:52,765,380...52,772,784
JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP3 charged multivesicular body protein 3 involved_in IMP (PMID:16740483) UniProt PMID:16740483 NCBI chr 2:86,503,430...86,563,443
Ensembl chr 2:86,503,430...86,563,479
JBrowse link
G MID2 midline 2 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr  X:107,825,735...107,931,637
Ensembl chr  X:107,825,755...107,931,637
JBrowse link
G PML PML nuclear body scaffold involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr15:73,994,716...74,047,827
Ensembl chr15:73,994,673...74,047,827
JBrowse link
G RNF103-CHMP3 RNF103-CHMP3 readthrough involved_in IMP (PMID:16740483) UniProt PMID:16740483 NCBI chr 2:86,503,430...86,721,122
Ensembl chr 2:86,505,668...86,721,122
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IMP
IDA
(PMID:18248090) UniProt PMID:18248090 NCBI chr 1:228,393,672...228,406,835
Ensembl chr 1:228,393,673...228,406,835
JBrowse link
G TRIM13 tripartite motif containing 13 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr13:49,997,042...50,018,467
Ensembl chr13:49,995,888...50,020,481
JBrowse link
G TRIM15 tripartite motif containing 15 involved_in IDA
IMP
(PMID:18248090) UniProt PMID:18248090 NCBI chr 6:30,163,546...30,172,693
Ensembl chr 6:30,163,206...30,172,693
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr11:4,384,897...4,393,702
Ensembl chr11:4,384,897...4,393,702
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:56,887,909...56,914,049
Ensembl chr17:56,836,387...56,914,080
JBrowse link
G TRIM26 tripartite motif containing 26 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:30,184,453...30,213,435
Ensembl chr 6:30,184,455...30,213,427
JBrowse link
G TRIM27 tripartite motif containing 27 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 6:28,903,002...28,923,985
Ensembl chr 6:28,903,002...28,923,988
JBrowse link
G TRIM28 tripartite motif containing 28 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr19:58,544,064...58,550,722
Ensembl chr19:58,544,064...58,550,722
JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 9:116,687,305...116,701,299
Ensembl chr 9:116,687,305...116,701,300
JBrowse link
G TRIM35 tripartite motif containing 35 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 8:27,284,886...27,311,272
Ensembl chr 8:27,284,886...27,311,272
JBrowse link
G TRIM5 tripartite motif containing 5 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr11:5,590,906...5,685,108
Ensembl chr11:5,663,195...5,938,619
JBrowse link
G TRIM56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chr 7:101,085,424...101,097,967
Ensembl chr 7:101,085,481...101,097,967
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr10:102,644,479...102,658,319
Ensembl chr10:102,644,479...102,658,318
JBrowse link
negative regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HEXIM1 HEXIM P-TEFb complex subunit 1 involved_in IMP (PMID:18249148) FlyBase PMID:18249148 NCBI chr17:45,148,475...45,152,099
Ensembl chr17:45,148,475...45,152,099
JBrowse link
G IFITM3 interferon induced transmembrane protein 3 involved_in IDA (PMID:20943977) UniProt PMID:20943977 NCBI chr11:319,676...320,860
Ensembl chr11:319,676...329,475
JBrowse link
G LARP7 La ribonucleoprotein 7, transcriptional regulator involved_in IMP (PMID:18249148), (PMID:18483487) FlyBase PMID:18249148 PMID:18483487 NCBI chr 4:112,637,143...112,657,586
Ensembl chr 4:112,637,107...112,657,592
JBrowse link
G MID2 midline 2 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr  X:107,825,735...107,931,637
Ensembl chr  X:107,825,755...107,931,637
JBrowse link
G SP100 SP100 nuclear antigen involved_in IDA (PMID:16873258) BHF-UCL PMID:16873258 NCBI chr 2:230,416,201...230,545,606
Ensembl chr 2:230,415,942...230,545,606
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:228,393,672...228,406,835
Ensembl chr 1:228,393,673...228,406,835
JBrowse link
G TRIM13 tripartite motif containing 13 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr13:49,997,042...50,018,467
Ensembl chr13:49,995,888...50,020,481
JBrowse link
G TRIM14 tripartite motif containing 14 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 9:98,072,014...98,119,420
Ensembl chr 9:98,069,275...98,119,222
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr11:4,384,897...4,393,702
Ensembl chr11:4,384,897...4,393,702
JBrowse link
G TRIM27 tripartite motif containing 27 involved_in IDA
IBA
(PMID:18248090)
(PMID:21873635)
UniProt
GO_Central
PMID:18248090 PMID:21873635 NCBI chr 6:28,903,002...28,923,985
Ensembl chr 6:28,903,002...28,923,988
JBrowse link
G TRIM31 tripartite motif containing 31 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:30,102,892...30,113,090
Ensembl chr 6:30,102,897...30,113,090
JBrowse link
G TRIM32 tripartite motif containing 32 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 9:116,687,305...116,701,299
Ensembl chr 9:116,687,305...116,701,300
JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:33,145,399...33,184,774
Ensembl chr 1:33,145,399...33,182,059
JBrowse link
G TRIM8 tripartite motif containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:102,644,479...102,658,319
Ensembl chr10:102,644,479...102,658,318
JBrowse link
G UBP1 upstream binding protein 1 involved_in IDA (PMID:8114710) GO_Central PMID:8114710 NCBI chr 3:33,388,336...33,440,405
Ensembl chr 3:33,388,336...33,441,371
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IMP (PMID:14679154) UniProt PMID:14679154 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
negative stranded viral RNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG16L1 autophagy related 16 like 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5552992|PMID:24550300)
GO_Central
MGI
PMID:21873635 PMID:24550300 MGI:5552992 NCBI chr 2:233,251,647...233,295,674
Ensembl chr 2:233,210,051...233,295,674
JBrowse link
G ATG16L2 autophagy related 16 like 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5552992|PMID:24550300)
GO_Central
MGI
PMID:21873635 PMID:24550300 MGI:5552992 NCBI chr11:72,814,407...72,845,132
Ensembl chr11:72,814,406...72,843,674
JBrowse link
G ATG5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5552992|PMID:24550300) Ensembl
MGI
PMID:24550300 GO_REF:0000107 MGI:5552992 NCBI chr 6:106,184,476...106,325,789
Ensembl chr 6:106,045,423...106,325,791
JBrowse link
G ATG7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chr 3:11,272,348...11,564,652
Ensembl chr 3:11,272,309...11,557,665
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:123,057,489...123,062,366
Ensembl chr11:123,057,489...123,063,230
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IMP (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:205,712,822...205,750,220
Ensembl chr 1:205,712,822...205,750,182
JBrowse link
G PPIB peptidylprolyl isomerase B involved_in IMP (PMID:15989969) AgBase PMID:15989969 NCBI chr15:64,155,817...64,163,022
Ensembl chr15:64,155,740...64,163,134
JBrowse link
G STOM stomatin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:121,338,987...121,370,250
Ensembl chr 9:121,338,987...121,370,304
JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in IMP (PMID:17686842) AgBase PMID:17686842 NCBI chr20:435,480...462,543
Ensembl chr20:423,596...462,566
JBrowse link
G VAPA VAMP associated protein A involved_in IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr18:9,914,016...9,960,021
Ensembl chr18:9,914,016...9,960,021
JBrowse link
G VAPB VAMP associated protein B and C involved_in IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
G YTHDC2 YTH domain containing 2 involved_in IMP (PMID:21559518) AgBase PMID:21559518 NCBI chr 5:113,513,683...113,595,284
Ensembl chr 5:113,513,694...113,595,285
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in ISO (PMID:25593157) AgBase PMID:25593157 NCBI chr15:60,347,151...60,398,025
Ensembl chr15:60,347,134...60,402,883
JBrowse link
G APOE apolipoprotein E involved_in IMP (PMID:25122793) AgBase PMID:25122793 NCBI chr19:44,905,796...44,909,393
Ensembl chr19:44,905,791...44,909,393
JBrowse link
G CAV2 caveolin 2 involved_in IMP (PMID:25556234) AgBase PMID:25556234 NCBI chr 7:116,499,738...116,508,541
Ensembl chr 7:116,287,380...116,508,541
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:1098064|PMID:9343248)
(MGI:2148352|PMID:11483763)
MGI PMID:9343248 PMID:11483763 MGI:1098064 MGI:2148352 NCBI chr19:42,507,306...42,528,482
Ensembl chr19:42,507,304...42,561,234
JBrowse link
G CFL1 cofilin 1 involved_in IMP (PMID:25556234) AgBase PMID:25556234 NCBI chr11:65,854,673...65,858,180
Ensembl chr11:65,823,022...65,862,026
JBrowse link
G CSF1R colony stimulating factor 1 receptor involved_in ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chr 5:150,053,295...150,113,365
Ensembl chr 5:150,053,291...150,113,372
JBrowse link
G IFNG interferon gamma involved_in ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740
JBrowse link
G IGF2R insulin like growth factor 2 receptor involved_in IMP (PMID:20889566) ARUK-UCL PMID:20889566 NCBI chr 6:159,969,082...160,111,504
Ensembl chr 6:159,969,082...160,113,507
JBrowse link
G PC pyruvate carboxylase involved_in IMP (PMID:23861867) AgBase PMID:23861867 NCBI chr11:66,848,420...66,958,418
Ensembl chr11:66,848,417...66,958,386
JBrowse link
G PPIB peptidylprolyl isomerase B involved_in IMP (PMID:15989969) AgBase PMID:15989969 NCBI chr15:64,155,817...64,163,022
Ensembl chr15:64,155,740...64,163,134
JBrowse link
G ZNF502 zinc finger protein 502 involved_in IMP (PMID:25556234) AgBase PMID:25556234 NCBI chr 3:44,712,660...44,723,831
Ensembl chr 3:44,712,643...44,723,831
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV2 caveolin 2 involved_in IMP (PMID:25556234) AgBase PMID:25556234 NCBI chr 7:116,499,738...116,508,541
Ensembl chr 7:116,287,380...116,508,541
JBrowse link
G PC pyruvate carboxylase involved_in IMP (PMID:23861867) AgBase PMID:23861867 NCBI chr11:66,848,420...66,958,418
Ensembl chr11:66,848,417...66,958,386
JBrowse link
G VAPA VAMP associated protein A involved_in IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr18:9,914,016...9,960,021
Ensembl chr18:9,914,016...9,960,021
JBrowse link
G VAPB VAMP associated protein B and C involved_in IDA (PMID:19515777) AgBase PMID:19515777 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
G ZNF502 zinc finger protein 502 involved_in IMP (PMID:25556234) AgBase PMID:25556234 NCBI chr 3:44,712,660...44,723,831
Ensembl chr 3:44,712,643...44,723,831
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNT1 cyclin T1 involved_in NAS (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr12:48,688,458...48,716,707
Ensembl chr12:48,688,458...48,716,998
JBrowse link
G CHD1 chromodomain helicase DNA binding protein 1 involved_in IMP (PMID:25297984) CACAO PMID:25297984 NCBI chr 5:98,853,985...98,929,772
Ensembl chr 5:98,853,985...98,929,007
JBrowse link
G CTDP1 CTD phosphatase subunit 1 involved_in IDA (PMID:15723517) CAFA PMID:15723517 NCBI chr18:79,679,803...79,756,625
Ensembl chr18:79,679,803...79,754,503
JBrowse link
G EP300 E1A binding protein p300 involved_in IDA (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr22:41,092,592...41,180,077
Ensembl chr22:41,092,592...41,180,077
JBrowse link
G FKBP8 FKBP prolyl isomerase 8 involved_in ISO (PMID:26748656) AgBase PMID:26748656 NCBI chr19:18,531,763...18,543,573
Ensembl chr19:18,531,751...18,544,077
JBrowse link
G HPN hepsin involved_in IDA (PMID:15614436) UniProt PMID:15614436 NCBI chr19:35,040,506...35,066,573
Ensembl chr19:35,040,506...35,066,573
JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit involved_in IDA (PMID:2833704) UniProt PMID:2833704 NCBI chr 1:58,780,791...58,784,047
Ensembl chr 1:58,776,845...58,784,048
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in IDA (PMID:7657162) UniProt PMID:7657162 NCBI chr 4:108,047,548...108,168,932
Ensembl chr 4:108,047,545...108,168,956
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IGI (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:205,712,822...205,750,220
Ensembl chr 1:205,712,822...205,750,182
JBrowse link
G RRP1B ribosomal RNA processing 1B involved_in IMP (PMID:26311876) UniProt PMID:26311876 NCBI chr21:43,659,560...43,696,079
Ensembl chr21:43,659,560...43,696,079
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in IMP (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr19:10,960,999...11,062,277
Ensembl chr19:10,960,932...11,079,426
JBrowse link
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in IMP (PMID:16687403) BHF-UCL PMID:16687403 NCBI chr22:23,786,966...23,838,009
Ensembl chr22:23,786,931...23,838,009
JBrowse link
G SNW1 SNW domain containing 1 involved_in IMP
IDA
(PMID:19818711)
(PMID:15905409)
UniProt PMID:15905409 PMID:19818711 NCBI chr14:77,717,599...77,761,156
Ensembl chr14:77,717,599...77,761,207
JBrowse link
G SP1 Sp1 transcription factor involved_in IDA (PMID:2833704) UniProt PMID:2833704 NCBI chr12:53,380,176...53,416,446
Ensembl chr12:53,380,176...53,416,446
JBrowse link
G TAF11 TATA-box binding protein associated factor 11 involved_in IDA (PMID:9108034) UniProt PMID:9108034 NCBI chr 6:34,877,462...34,888,071
Ensembl chr 6:34,877,462...34,888,071
JBrowse link
G TFAP4 transcription factor AP-4 involved_in IDA (PMID:2833704) UniProt PMID:2833704 NCBI chr16:4,257,186...4,273,023
Ensembl chr16:4,257,186...4,273,075
JBrowse link
G ZNF639 zinc finger protein 639 involved_in IMP (PMID:20484494) UniProt PMID:20484494 NCBI chr 3:179,322,876...179,338,583
Ensembl chr 3:179,323,031...179,338,583
JBrowse link
positive regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDB1 damage specific DNA binding protein 1 involved_in IMP (PMID:23137809) AgBase PMID:23137809 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596
JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IMP (PMID:18160438) AgBase PMID:18160438 NCBI chr15:65,530,463...65,578,355
Ensembl chr15:65,530,418...65,578,349
JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 involved_in IMP (PMID:23907398) AgBase PMID:23907398 NCBI chr20:49,113,339...49,219,295
Ensembl chr20:49,113,339...49,188,367
JBrowse link
G TBC1D20 TBC1 domain family member 20 involved_in IMP (PMID:17686842) AgBase PMID:17686842 NCBI chr20:435,480...462,543
Ensembl chr20:423,596...462,566
JBrowse link
positive regulation of apoptotic process by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAD BCL2 associated agonist of cell death involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3057092|PMID:15231831) Ensembl
MGI
PMID:15231831 GO_REF:0000107 MGI:3057092 NCBI chr11:64,269,828...64,284,704
Ensembl chr11:64,269,830...64,284,704
JBrowse link
G BCL2L11 BCL2 like 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3057092|PMID:15231831) Ensembl
MGI
PMID:15231831 GO_REF:0000107 MGI:3057092 NCBI chr 2:111,120,914...111,168,445
Ensembl chr 2:111,119,378...111,168,445
JBrowse link
G CCR5 C-C motif chemokine receptor 5 ISO HIV-1 RGD PMID:19034668 RGD:4890424 NCBI chr 3:46,370,142...46,376,206
Ensembl chr 3:46,370,854...46,376,206
JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMR1 FMRP translational regulator 1 involved_in IMP (PMID:24514761) UniProt PMID:24514761 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,919...147,951,125
JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOP2A DNA topoisomerase II alpha involved_in IMP (PMID:16712776) UniProt PMID:16712776 NCBI chr17:40,388,525...40,417,902
Ensembl chr17:40,388,525...40,417,896
JBrowse link
G TOP2B DNA topoisomerase II beta involved_in IMP (PMID:16712776) UniProt PMID:16712776 NCBI chr 3:25,597,905...25,664,907
Ensembl chr 3:25,597,984...25,664,907
JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TSG101 tumor susceptibility 101 involved_in IMP (PMID:11595185), (PMID:15218037) UniProt PMID:11595185 PMID:15218037 NCBI chr11:18,480,311...18,526,942
Ensembl chr11:18,468,336...18,526,951
JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in IMP (PMID:15218037) UniProt PMID:15218037 NCBI chr12:122,865,330...122,896,143
Ensembl chr12:122,865,330...122,896,127
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IMP (PMID:24878737) UniProt PMID:24878737 NCBI chr16:69,311,350...69,326,939
Ensembl chr16:69,311,350...69,326,939
JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSG basigin (Ok blood group) involved_in IDA
IMP
(PMID:29739904)
(PMID:11353871), (PMID:15688292)
UniProt PMID:11353871 PMID:15688292 PMID:29739904 NCBI chr19:571,283...583,493
Ensembl chr19:571,277...583,494
JBrowse link
G CD4 CD4 molecule involved_in IDA (PMID:24942581) CAFA PMID:24942581 NCBI chr12:6,789,528...6,820,799
Ensembl chr12:6,786,858...6,820,799
JBrowse link
G CD74 CD74 molecule involved_in IDA (PMID:24942581) CAFA PMID:24942581 NCBI chr 5:150,401,637...150,412,910
Ensembl chr 5:150,400,041...150,412,969
JBrowse link
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 involved_in IDA (PMID:24942581) CAFA PMID:24942581 NCBI chr 6:32,578,775...32,589,848
Ensembl chr 6:32,578,769...32,589,848
JBrowse link
G LGALS1 galectin 1 involved_in IDA (PMID:21670307) UniProt PMID:21670307 NCBI chr22:37,675,636...37,679,802
Ensembl chr22:37,675,636...37,679,802
JBrowse link
G LGALS9 galectin 9 involved_in IDA (PMID:21670307) UniProt PMID:21670307 NCBI chr17:27,631,172...27,649,560
Ensembl chr17:27,629,798...27,649,560
JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) AgBase PMID:11277703 NCBI chr11:119,638,098...119,729,200
Ensembl chr11:119,623,408...119,729,200
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta involved_in IMP (PMID:21670307) UniProt PMID:21670307 NCBI chr17:81,843,159...81,860,535
Ensembl chr17:81,843,159...81,860,856
JBrowse link
G TMPRSS2 transmembrane serine protease 2 involved_in IDA (PMID:21068237), (PMID:24227843), (PMID:32404436) UniProt PMID:21068237 PMID:24227843 PMID:32404436 NCBI chr21:41,464,305...41,508,158
Ensembl chr21:41,464,300...41,531,116
JBrowse link
G TMPRSS4 transmembrane serine protease 4 involved_in IDA (PMID:32404436) UniProt PMID:32404436 NCBI chr11:118,077,016...118,125,505
Ensembl chr11:118,077,012...118,121,890
JBrowse link
G TRIM11 tripartite motif containing 11 involved_in IMP (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:228,393,672...228,406,835
Ensembl chr 1:228,393,673...228,406,835
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:4,384,897...4,393,702
Ensembl chr11:4,384,897...4,393,702
JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:25,962,723...25,991,231
Ensembl chr 6:25,962,802...25,991,231
JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in IDA
IMP
(PMID:19651874)
(PMID:18362360)
UniProt PMID:18362360 PMID:19651874 NCBI chr 1:154,582,057...154,627,997
Ensembl chr 1:154,581,695...154,628,013
JBrowse link
G ADARB1 adenosine deaminase RNA specific B1 involved_in IMP (PMID:21289159) UniProt PMID:21289159 NCBI chr21:45,074,578...45,226,563
Ensembl chr21:45,073,853...45,226,560
JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in TAS (PMID:10488085) BHF-UCL PMID:10488085 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G CD28 CD28 molecule involved_in NAS (PMID:7492435) UniProt PMID:7492435 NCBI chr 2:203,706,509...203,739,756
Ensembl chr 2:203,706,475...203,738,912
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IMP (PMID:23386060) UniProt PMID:23386060 NCBI chr 8:17,221,981...17,246,857
Ensembl chr 8:17,224,966...17,246,878
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IMP (PMID:23137809) AgBase PMID:23137809 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in IMP (PMID:20862261) AgBase PMID:20862261 NCBI chr  X:41,333,308...41,364,472
Ensembl chr  X:41,333,348...41,364,472
JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) involved_in IMP (PMID:26567527) AgBase PMID:26567527 NCBI chr 7:73,328,154...73,358,625
Ensembl chr 7:73,328,161...73,358,637
JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IMP (PMID:18160438) AgBase PMID:18160438 NCBI chr15:65,530,463...65,578,355
Ensembl chr15:65,530,418...65,578,349
JBrowse link
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 involved_in IDA (PMID:19416887) BHF-UCL PMID:19416887 NCBI chr10:89,392,623...89,406,487
Ensembl chr10:89,392,546...89,406,487
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IMP (PMID:26735137) UniProt PMID:26735137 NCBI chr 5:154,682,979...154,817,605
Ensembl chr 5:154,712,843...154,817,605
JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in IDA (PMID:19264593) BHF-UCL PMID:19264593 NCBI chr 1:200,027,710...200,177,415
Ensembl chr 1:200,027,614...200,177,420
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IMP (PMID:26735137) UniProt PMID:26735137 NCBI chr 8:100,702,916...100,722,088
Ensembl chr 8:100,685,816...100,722,809
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IMP (PMID:15231837) UniProt PMID:15231837 NCBI chr 3:57,556,274...57,656,495
Ensembl chr 3:57,556,274...57,566,848
JBrowse link
G PKN2 protein kinase N2 involved_in IMP (PMID:15364941) AgBase PMID:15364941 NCBI chr 1:88,684,239...88,836,255
Ensembl chr 1:88,684,222...88,836,255
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha acts_upstream_of_or_within IMP (PMID:22479552) ARUK-UCL PMID:22479552 NCBI chr22:46,150,526...46,243,756
Ensembl chr22:46,150,521...46,243,756
JBrowse link
G PPIA peptidylprolyl isomerase A involved_in IMP (PMID:19932913) UniProt PMID:19932913 NCBI chr 7:44,795,960...44,803,117
Ensembl chr 7:44,796,680...44,824,564
JBrowse link
G PPID peptidylprolyl isomerase D involved_in IMP (PMID:19932913) UniProt PMID:19932913 NCBI chr 4:158,709,127...158,723,396
Ensembl chr 4:158,709,127...158,723,396
JBrowse link
G PPIE peptidylprolyl isomerase E involved_in IMP (PMID:19932913) UniProt PMID:19932913 NCBI chr 1:39,738,845...39,765,698
Ensembl chr 1:39,692,182...39,763,914
JBrowse link
G PPIH peptidylprolyl isomerase H involved_in IMP (PMID:19932913) UniProt PMID:19932913 NCBI chr 1:42,657,770...42,681,654
Ensembl chr 1:42,658,335...42,676,758
JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IMP (PMID:20614012) UniProt PMID:20614012 NCBI chr19:12,945,846...12,953,642
Ensembl chr19:12,945,855...12,953,642
JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IDA (PMID:20498328) BHF-UCL PMID:20498328 NCBI chr 6:35,832,966...35,921,098
Ensembl chr 6:35,832,966...35,921,342
JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IDA (PMID:20498328) BHF-UCL PMID:20498328 NCBI chr 7:105,110,708...105,399,363
Ensembl chr 7:105,110,704...105,399,308
JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 involved_in IMP (PMID:23907398) AgBase PMID:23907398 NCBI chr20:49,113,339...49,219,295
Ensembl chr20:49,113,339...49,188,367
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex involved_in IDA (PMID:11641396) UniProt PMID:11641396 NCBI chr12:53,500,923...53,506,431
Ensembl chr12:53,500,921...53,506,431
JBrowse link
G TMEM39A transmembrane protein 39A involved_in IDA (PMID:31849860) UniProt PMID:31849860 NCBI chr 3:119,428,949...119,463,632
Ensembl chr 3:119,428,949...119,468,830
JBrowse link
G TRIM38 tripartite motif containing 38 acts_upstream_of_or_within ISO (MGI:5441682|PMID:22539786) MGI PMID:22539786 MGI:5441682 NCBI chr 6:25,962,723...25,991,231
Ensembl chr 6:25,962,802...25,991,231
JBrowse link
G VAPB VAMP associated protein B and C involved_in IMP (PMID:16227268) UniProt PMID:16227268 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA2 annexin A2 involved_in ISO (PMID:25593157) AgBase PMID:25593157 NCBI chr15:60,347,151...60,398,025
Ensembl chr15:60,347,134...60,402,883
JBrowse link
G AXL AXL receptor tyrosine kinase involved_in IMP (PMID:22673088) FlyBase PMID:22673088 NCBI chr19:41,219,223...41,261,766
Ensembl chr19:41,219,223...41,261,766
JBrowse link
G CD209 CD209 molecule involved_in IMP (PMID:22673088) FlyBase PMID:22673088 NCBI chr19:7,739,993...7,747,534
Ensembl chr19:7,739,993...7,747,564
JBrowse link
G CLEC4G C-type lectin domain family 4 member G involved_in IMP (PMID:22673088) FlyBase PMID:22673088 NCBI chr19:7,728,957...7,732,110
Ensembl chr19:7,728,958...7,733,906
JBrowse link
G KPNA2 karyopherin subunit alpha 2 acts_upstream_of_or_within IMP (PMID:28189564) MGI PMID:28189564 NCBI chr17:68,035,735...68,046,854
Ensembl chr17:68,035,636...68,047,364
JBrowse link
G KPNA6 karyopherin subunit alpha 6 acts_upstream_of_or_within IMP (PMID:28189564) MGI PMID:28189564 NCBI chr 1:32,108,043...32,176,563
Ensembl chr 1:32,108,056...32,176,563
JBrowse link
G TYRO3 TYRO3 protein tyrosine kinase involved_in IMP (PMID:22673088) FlyBase PMID:22673088 NCBI chr15:41,559,212...41,583,589
Ensembl chr15:41,557,675...41,583,589
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IMP (PMID:11595185) UniProt PMID:11595185 NCBI chr16:69,311,350...69,326,939
Ensembl chr16:69,311,350...69,326,939
JBrowse link
positive regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAB7A RAB7A, member RAS oncogene family involved_in IMP (PMID:22072966) CACAO PMID:22072966 NCBI chr 3:128,726,183...128,814,798
Ensembl chr 3:128,693,669...128,825,942
JBrowse link
G STOM stomatin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:121,338,987...121,370,250
Ensembl chr 9:121,338,987...121,370,304
JBrowse link
G TMEM250 transmembrane protein 250 involved_in IDA (PMID:21667337) UniProt PMID:21667337 NCBI chr 9:136,114,581...136,118,875
Ensembl chr 9:136,114,581...136,118,875
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in ISO (MGI:5619479|PMID:17940959) UniProt PMID:17940959 MGI:5619479 NCBI chr16:69,311,350...69,326,939
Ensembl chr16:69,311,350...69,326,939
JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in ISO (MGI:5619479|PMID:17940959) UniProt PMID:17940959 MGI:5619479 NCBI chr18:63,389,190...63,422,495
Ensembl chr18:63,389,190...63,422,483
JBrowse link
positive regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP2A charged multivesicular body protein 2A involved_in IGI
IMP
(PMID:23051622) UniProt PMID:23051622 NCBI chr19:58,551,566...58,555,624
Ensembl chr19:58,551,566...58,555,105
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IGI
IMP
(PMID:23051622) UniProt PMID:23051622 NCBI chr 3:87,227,309...87,255,556
Ensembl chr 3:87,227,271...87,255,556
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IGI
IMP
(PMID:23051622) UniProt PMID:23051622 NCBI chr 2:86,503,430...86,563,443
Ensembl chr 2:86,503,430...86,563,479
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IMP (PMID:23137809) AgBase PMID:23137809 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596
JBrowse link
G RNF103-CHMP3 RNF103-CHMP3 readthrough involved_in IGI
IMP
(PMID:23051622) UniProt PMID:23051622 NCBI chr 2:86,503,430...86,721,122
Ensembl chr 2:86,505,668...86,721,122
JBrowse link
G TSG101 tumor susceptibility 101 involved_in IMP (PMID:11595185), (PMID:15218037) UniProt PMID:11595185 PMID:15218037 NCBI chr11:18,480,311...18,526,942
Ensembl chr11:18,468,336...18,526,951
JBrowse link
G VPS37B VPS37B subunit of ESCRT-I involved_in IMP (PMID:15218037) UniProt PMID:15218037 NCBI chr12:122,865,330...122,896,143
Ensembl chr12:122,865,330...122,896,127
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IMP (PMID:11595185) UniProt PMID:11595185 NCBI chr16:69,311,350...69,326,939
Ensembl chr16:69,311,350...69,326,939
JBrowse link
positive regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNT1 cyclin T1 involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr12:48,688,458...48,716,707
Ensembl chr12:48,688,458...48,716,998
JBrowse link
G CDK9 cyclin dependent kinase 9 involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr 9:127,786,034...127,790,792
Ensembl chr 9:127,785,679...127,790,792
JBrowse link
G CTDP1 CTD phosphatase subunit 1 involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr18:79,679,803...79,756,625
Ensembl chr18:79,679,803...79,754,503
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IDA (PMID:11096080) UniProt PMID:11096080 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
G GTF2F1 general transcription factor IIF subunit 1 involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr19:6,379,569...6,393,186
Ensembl chr19:6,379,572...6,393,981
JBrowse link
G GTF2F2 general transcription factor IIF subunit 2 involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr13:45,119,830...45,284,893
Ensembl chr13:45,120,510...45,284,893
JBrowse link
G MAP3K1 mitogen-activated protein kinase kinase kinase 1 ISO from cytomegalovirus immediate-early promoter RGD PMID:11746500 RGD:2293493 NCBI chr 5:56,815,543...56,896,152
Ensembl chr 5:56,815,549...56,896,152
JBrowse link
G MDFIC MyoD family inhibitor domain containing involved_in IDA
IBA
(PMID:10671520)
(PMID:21873635)
UniProt
GO_Central
PMID:10671520 PMID:21873635 NCBI chr 7:114,922,094...115,019,917
Ensembl chr 7:114,922,359...115,019,202
JBrowse link
G NELFA negative elongation factor complex member A involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr 4:1,982,717...2,041,914
Ensembl chr 4:1,982,717...2,041,903
JBrowse link
G NELFB negative elongation factor complex member B involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr 9:137,255,327...137,273,542
Ensembl chr 9:137,255,327...137,273,542
JBrowse link
G NELFCD negative elongation factor complex member C/D involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr20:58,981,252...58,995,133
Ensembl chr20:58,981,208...58,995,133
JBrowse link
G NELFE negative elongation factor complex member E involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr 6:31,952,087...31,959,043
Ensembl chr 6:31,952,087...31,959,038
JBrowse link
G NOTCH1 notch receptor 1 involved_in ISO (MGI:5693363|PMID:21191019) AgBase PMID:21191019 MGI:5693363 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G PFN1 profilin 1 ISO RGD PMID:12740026 RGD:2324854 NCBI chr17:4,945,652...4,948,530
Ensembl chr17:4,945,652...4,949,061
JBrowse link
G POLR2A RNA polymerase II subunit A involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr17:7,484,366...7,514,616
Ensembl chr17:7,484,366...7,514,616
JBrowse link
G POLR2B RNA polymerase II subunit B involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr 4:56,978,896...57,031,158
Ensembl chr 4:56,977,722...57,031,158
JBrowse link
G POLR2C RNA polymerase II subunit C involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr16:57,462,679...57,472,009
Ensembl chr16:57,462,660...57,472,009
JBrowse link
G POLR2D RNA polymerase II subunit D involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr 2:127,843,553...127,858,155
Ensembl chr 2:127,843,553...127,858,155
JBrowse link
G POLR2E RNA polymerase II, I and III subunit E involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr19:1,086,574...1,095,387
Ensembl chr19:1,086,574...1,095,380
JBrowse link
G POLR2F RNA polymerase II, I and III subunit F involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr22:37,953,663...38,041,915
Ensembl chr22:37,952,607...38,041,915
JBrowse link
G POLR2G RNA polymerase II subunit G involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr11:62,761,580...62,766,710
Ensembl chr11:62,761,565...62,766,710
JBrowse link
G POLR2H RNA polymerase II, I and III subunit H involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr 3:184,361,710...184,368,594
Ensembl chr 3:184,361,718...184,368,596
JBrowse link
G POLR2I RNA polymerase II subunit I involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr19:36,113,709...36,114,875
Ensembl chr19:36,113,709...36,115,213
JBrowse link
G POLR2J RNA polymerase II subunit J involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr 7:102,473,128...102,478,934
Ensembl chr 7:102,473,118...102,478,907
JBrowse link
G POLR2K RNA polymerase II, I and III subunit K involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr 8:100,150,636...100,154,003
Ensembl chr 8:100,150,623...100,154,003
JBrowse link
G POLR2L RNA polymerase II, I and III subunit L involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr11:839,721...842,529
Ensembl chr11:837,356...842,529
JBrowse link
G RSF1 remodeling and spacing factor 1 involved_in IDA (PMID:11788598) UniProt PMID:11788598 NCBI chr11:77,660,009...77,872,232
Ensembl chr11:77,660,009...77,820,869
JBrowse link
G SUPT4H1 SPT4 homolog, DSIF elongation factor subunit involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr17:58,345,178...58,352,201
Ensembl chr17:58,345,175...58,353,093
JBrowse link
G SUPT5H SPT5 homolog, DSIF elongation factor subunit involved_in TAS Reactome Reactome:R-HSA-167246 NCBI chr19:39,445,582...39,476,670
Ensembl chr19:39,436,156...39,476,670
JBrowse link
positive regulation of viral translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX9 DExH-box helicase 9 involved_in IMP (PMID:16680162) UniProt PMID:16680162 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in IGI (PMID:21047970) CACAO PMID:21047970 NCBI chr 7:116,525,009...116,561,185
Ensembl chr 7:116,524,994...116,561,179
JBrowse link
G CAV2 caveolin 2 involved_in IGI (PMID:21047970) CACAO PMID:21047970 NCBI chr 7:116,499,738...116,508,541
Ensembl chr 7:116,287,380...116,508,541
JBrowse link
G CTSL cathepsin L involved_in IDA (PMID:16081529), (PMID:32221306), (PMID:32855215) UniProt PMID:16081529 PMID:32221306 PMID:32855215 NCBI chr 9:87,726,119...87,731,469
Ensembl chr 9:87,724,051...87,731,469
JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 involved_in IMP (PMID:21047970) CACAO PMID:21047970 NCBI chr 1:51,354,263...51,519,275
Ensembl chr 1:51,354,263...51,519,266
JBrowse link
G KIAA0319L KIAA0319 like acts_upstream_of_or_within ISO (MGI:5750797|PMID:26814968) MGI PMID:26814968 MGI:5750797 NCBI chr 1:35,433,490...35,557,603
Ensembl chr 1:35,433,492...35,557,950
JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing involved_in IDA (PMID:32221306) UniProt PMID:32221306 NCBI chr 2:208,266,178...208,358,747
Ensembl chr 2:208,266,255...208,358,746
JBrowse link
G TPCN2 two pore segment channel 2 involved_in IDA (PMID:32221306) UniProt PMID:32221306 NCBI chr11:69,048,932...69,090,597
Ensembl chr11:69,048,932...69,136,316
JBrowse link
receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE2 angiotensin converting enzyme 2 involved_in IDA (PMID:18343844), (PMID:32221306) BHF-UCL PMID:18343844 PMID:32221306 NCBI chr  X:15,518,197...15,607,211
Ensembl chr  X:15,494,566...15,607,236
JBrowse link
G CD81 CD81 molecule involved_in TAS (PMID:14676841) UniProt PMID:14676841 NCBI chr11:2,376,180...2,397,402
Ensembl chr11:2,376,177...2,397,397
JBrowse link
G GAS6 growth arrest specific 6 involved_in IDA (PMID:21501828) UniProt PMID:21501828 NCBI chr13:113,820,549...113,864,076
Ensembl chr13:113,820,549...113,864,076
JBrowse link
G ICAM1 intercellular adhesion molecule 1 involved_in IDA (PMID:2538243) BHF-UCL PMID:2538243 NCBI chr19:10,271,120...10,286,615
Ensembl chr19:10,271,093...10,286,615
JBrowse link
G LRRC15 leucine rich repeat containing 15 involved_in IMP (PMID:18385238) UniProt PMID:18385238 NCBI chr 3:194,355,249...194,369,743
Ensembl chr 3:194,355,249...194,369,743
JBrowse link
regulation of defense response to virus by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP1B1 adaptor related protein complex 1 subunit beta 1 involved_in TAS Reactome Reactome:R-HSA-164940 NCBI chr22:29,327,680...29,388,570
Ensembl chr22:29,327,680...29,388,583
JBrowse link
G AP1G1 adaptor related protein complex 1 subunit gamma 1 involved_in TAS Reactome Reactome:R-HSA-164940 NCBI chr16:71,729,000...71,808,834
Ensembl chr16:71,729,000...71,809,201
JBrowse link
G AP1M1 adaptor related protein complex 1 subunit mu 1 involved_in TAS Reactome Reactome:R-HSA-164940 NCBI chr19:16,197,911...16,245,906
Ensembl chr19:16,197,854...16,245,906
JBrowse link
G AP1M2 adaptor related protein complex 1 subunit mu 2 involved_in TAS Reactome Reactome:R-HSA-164940 NCBI chr19:10,572,671...10,587,315
Ensembl chr19:10,572,671...10,587,315
JBrowse link
G AP1S1 adaptor related protein complex 1 subunit sigma 1 involved_in TAS Reactome Reactome:R-HSA-164940 NCBI chr 7:101,154,476...101,161,276
Ensembl chr 7:101,154,456...101,161,596
JBrowse link
G AP1S2 adaptor related protein complex 1 subunit sigma 2 involved_in TAS Reactome Reactome:R-HSA-164940 NCBI chr  X:15,825,806...15,854,966
Ensembl chr  X:15,825,806...15,854,931
JBrowse link
G AP1S3 adaptor related protein complex 1 subunit sigma 3 involved_in TAS Reactome Reactome:R-HSA-164940 NCBI chr 2:223,755,326...223,837,582
Ensembl chr 2:223,751,686...223,838,027
JBrowse link
G AP2A1 adaptor related protein complex 2 subunit alpha 1 involved_in TAS Reactome Reactome:R-HSA-167590 Reactome:R-HSA-182218 NCBI chr19:49,767,001...49,807,114
Ensembl chr19:49,767,001...49,807,114
JBrowse link
G AP2A2 adaptor related protein complex 2 subunit alpha 2 involved_in TAS Reactome Reactome:R-HSA-167590 Reactome:R-HSA-182218 NCBI chr11:925,850...1,012,240
Ensembl chr11:924,894...1,012,245
JBrowse link
G AP2B1 adaptor related protein complex 2 subunit beta 1 involved_in TAS Reactome Reactome:R-HSA-167590 Reactome:R-HSA-182218 NCBI chr17:35,587,265...35,726,413
Ensembl chr17:35,578,046...35,726,413
JBrowse link
G AP2M1 adaptor related protein complex 2 subunit mu 1 involved_in TAS Reactome Reactome:R-HSA-164939 Reactome:R-HSA-167590 Reactome:R-HSA-182218 NCBI chr 3:184,174,855...184,184,091
Ensembl chr 3:184,174,689...184,184,091
JBrowse link
G AP2S1 adaptor related protein complex 2 subunit sigma 1 involved_in TAS Reactome Reactome:R-HSA-167590 Reactome:R-HSA-182218 NCBI chr19:46,838,167...46,850,846
Ensembl chr19:46,838,136...46,850,846
JBrowse link
G ARF1 ADP ribosylation factor 1 involved_in TAS Reactome Reactome:R-HSA-167590 NCBI chr 1:228,082,708...228,099,212
Ensembl chr 1:228,082,660...228,099,212
JBrowse link
G ATP6V1H ATPase H+ transporting V1 subunit H involved_in TAS Reactome Reactome:R-HSA-167590 Reactome:R-HSA-182218 NCBI chr 8:53,715,543...53,843,245
Ensembl chr 8:53,715,543...53,843,558
JBrowse link
G B2M beta-2-microglobulin involved_in TAS Reactome Reactome:R-HSA-164940 NCBI chr15:44,711,492...44,718,145
Ensembl chr15:44,711,487...44,718,851
JBrowse link
G CD247 CD247 molecule involved_in TAS Reactome Reactome:R-HSA-164943 NCBI chr 1:167,430,640...167,518,542
Ensembl chr 1:167,430,640...167,518,610
JBrowse link
G CD28 CD28 molecule involved_in TAS Reactome Reactome:R-HSA-164939 NCBI chr 2:203,706,509...203,739,756
Ensembl chr 2:203,706,475...203,738,912
JBrowse link
G CD4 CD4 molecule involved_in TAS Reactome Reactome:R-HSA-167590 NCBI chr12:6,789,528...6,820,799
Ensembl chr12:6,786,858...6,820,799
JBrowse link
G CD8B CD8b molecule involved_in TAS Reactome Reactome:R-HSA-182218 NCBI chr 2:86,815,369...86,861,886
Ensembl chr 2:86,815,339...86,861,924
JBrowse link
G DOCK2 dedicator of cytokinesis 2 involved_in TAS Reactome Reactome:R-HSA-164944 NCBI chr 5:169,637,247...170,083,382
Ensembl chr 5:169,637,268...170,083,382
JBrowse link
G ELMO1 engulfment and cell motility 1 involved_in TAS Reactome Reactome:R-HSA-164944 NCBI chr 7:36,852,906...37,449,326
Ensembl chr 7:36,852,906...37,449,223
JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase involved_in TAS Reactome Reactome:R-HSA-164944 NCBI chr 6:111,660,332...111,873,452
Ensembl chr 6:111,660,332...111,873,452
JBrowse link
G HCK HCK proto-oncogene, Src family tyrosine kinase involved_in TAS Reactome Reactome:R-HSA-164944 NCBI chr20:32,052,242...32,101,856
Ensembl chr20:32,052,197...32,101,856
JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase involved_in TAS Reactome Reactome:R-HSA-164944 Reactome:R-HSA-167590 NCBI chr 1:32,251,265...32,286,165
Ensembl chr 1:32,251,239...32,286,165
JBrowse link
G PACS1 phosphofurin acidic cluster sorting protein 1 involved_in TAS Reactome Reactome:R-HSA-164940 NCBI chr11:66,070,272...66,244,744
Ensembl chr11:66,070,272...66,244,744
JBrowse link
G PAK2 p21 (RAC1) activated kinase 2 involved_in TAS Reactome Reactome:R-HSA-164943 NCBI chr 3:196,739,857...196,832,647
Ensembl chr 3:196,739,857...196,832,647
JBrowse link
G RAC1 Rac family small GTPase 1 involved_in TAS Reactome Reactome:R-HSA-164944 NCBI chr 7:6,374,527...6,403,967
Ensembl chr 7:6,374,527...6,403,967
JBrowse link
regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCL8 C-X-C motif chemokine ligand 8 involved_in IDA (PMID:11483765) UniProt PMID:11483765 NCBI chr 4:73,740,569...73,743,716
Ensembl chr 4:73,740,541...73,743,716
JBrowse link
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SNF8 SNF8 subunit of ESCRT-II involved_in IMP (PMID:22978549) UniProt PMID:22978549 NCBI chr17:48,929,316...48,944,842
Ensembl chr17:48,929,316...48,944,842
JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC104389.5 novel transcript involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr11:5,254,392...5,678,434 JBrowse link
G HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in IDA (PMID:12138164) UniProt PMID:12138164 NCBI chr 6:114,055,586...114,343,023
Ensembl chr 6:114,055,596...114,343,023
JBrowse link
G NECTIN2 nectin cell adhesion molecule 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:11602758)
GO_Central
CACAO
PMID:11602758 PMID:21873635 NCBI chr19:44,846,297...44,889,223
Ensembl chr19:44,846,175...44,889,223
JBrowse link
G TRIM14 tripartite motif containing 14 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:98,072,014...98,119,420
Ensembl chr 9:98,069,275...98,119,222
JBrowse link
G TRIM21 tripartite motif containing 21 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:4,384,897...4,393,702
Ensembl chr11:4,384,897...4,393,702
JBrowse link
G TRIM22 tripartite motif containing 22 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:5,689,790...5,710,863
Ensembl chr11:5,689,697...5,737,089
JBrowse link
G TRIM25 tripartite motif containing 25 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr17:56,887,909...56,914,049
Ensembl chr17:56,836,387...56,914,080
JBrowse link
G TRIM27 tripartite motif containing 27 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:28,903,002...28,923,985
Ensembl chr 6:28,903,002...28,923,988
JBrowse link
G TRIM34 tripartite motif containing 34 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:5,619,944...5,644,398
Ensembl chr11:5,619,764...5,644,398
JBrowse link
G TRIM38 tripartite motif containing 38 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:25,962,723...25,991,231
Ensembl chr 6:25,962,802...25,991,231
JBrowse link
G TRIM5 tripartite motif containing 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:5,590,906...5,685,108
Ensembl chr11:5,663,195...5,938,619
JBrowse link
G TRIM6 tripartite motif containing 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:5,596,111...5,612,952
Ensembl chr11:5,596,109...5,612,958
JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IDA (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:33,145,399...33,184,774
Ensembl chr 1:33,145,399...33,182,059
JBrowse link
G TRIM68 tripartite motif containing 68 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:4,598,672...4,608,231
Ensembl chr11:4,598,672...4,608,231
JBrowse link
G TRIML1 tripartite motif family like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:188,137,229...188,150,768
Ensembl chr 4:188,139,441...188,147,743
JBrowse link
G TRIML2 tripartite motif family like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:188,091,255...188,109,603
Ensembl chr 4:188,091,272...188,109,603
JBrowse link
regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:63,123,346...63,320,280
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G DDX5 DEAD-box helicase 5 involved_in IEA
ISO
Ensembl
RGD
PMID:19224332 GO_REF:0000107 RGD:5128521 NCBI chr17:64,498,254...64,506,866
Ensembl chr17:64,498,254...64,508,199
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr14:95,086,228...95,158,263
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G MIR24-1 microRNA 24-1 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr 9:95,086,021...95,086,088
Ensembl chr 9:95,086,021...95,086,088
JBrowse link
G MIR24-2 microRNA 24-2 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr19:13,836,287...13,836,359
Ensembl chr19:13,836,287...13,836,359
JBrowse link
G MIR378A microRNA 378a acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr 5:149,732,825...149,732,890
Ensembl chr 5:149,732,825...149,732,890
JBrowse link
G MIR93 microRNA 93 acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chr 7:100,093,768...100,093,847
Ensembl chr 7:100,093,768...100,093,847
JBrowse link
G PPIA peptidylprolyl isomerase A involved_in TAS
IMP
(PMID:7590732)
(PMID:11250896)
UniProt PMID:7590732 PMID:11250896 NCBI chr 7:44,795,960...44,803,117
Ensembl chr 7:44,796,680...44,824,564
JBrowse link
regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H acts_upstream_of_or_within ISO (MGI:54738|PMID:293683) MGI PMID:293683 MGI:54738 NCBI chr22:39,097,203...39,104,067
Ensembl chr22:39,097,224...39,104,067
JBrowse link
G LAMP3 lysosomal associated membrane protein 3 involved_in IMP (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chr 3:183,122,215...183,162,761
Ensembl chr 3:183,122,215...183,163,839
JBrowse link
regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CXCR4 C-X-C motif chemokine receptor 4 involved_in IEA
ISO
Ensembl
RGD
PMID:9060691 GO_REF:0000107 RGD:11352687 NCBI chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,118,149
JBrowse link
regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TRIM25 tripartite motif containing 25 involved_in IMP (PMID:18248090) UniProt PMID:18248090 NCBI chr17:56,887,909...56,914,049
Ensembl chr17:56,836,387...56,914,080
JBrowse link
G TRIM31 tripartite motif containing 31 involved_in IMP (PMID:18248090) UniProt PMID:18248090 NCBI chr 6:30,102,892...30,113,090
Ensembl chr 6:30,102,897...30,113,090
JBrowse link
G TRIM62 tripartite motif containing 62 involved_in IMP (PMID:18248090) UniProt PMID:18248090 NCBI chr 1:33,145,399...33,184,774
Ensembl chr 1:33,145,399...33,182,059
JBrowse link
G TSG101 tumor susceptibility 101 NOT|involved_in IMP (PMID:11595185) UniProt PMID:11595185 NCBI chr11:18,480,311...18,526,942
Ensembl chr11:18,468,336...18,526,951
JBrowse link
regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TARBP2 TARBP2 subunit of RISC loading complex involved_in IEA
IDA
(PMID:11641396) InterPro
UniProt
PMID:11641396 GO_REF:0000002 NCBI chr12:53,500,923...53,506,431
Ensembl chr12:53,500,921...53,506,431
JBrowse link
release from viral latency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CREB3 cAMP responsive element binding protein 3 involved_in TAS
IDA
(PMID:10623756)
(PMID:20091349)
UniProt PMID:10623756 PMID:20091349 NCBI chr 9:35,732,666...35,736,999
Ensembl chr 9:35,732,598...35,736,999
JBrowse link
G HCFC1 host cell factor C1 involved_in NAS (PMID:10675337) UniProt PMID:10675337 NCBI chr  X:153,947,556...153,972,360
Ensembl chr  X:153,947,557...153,971,818
JBrowse link
G NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in IMP (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chr 1:205,712,822...205,750,220
Ensembl chr 1:205,712,822...205,750,182
JBrowse link
single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMARCB1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within IDA (PMID:14963118) MGI PMID:14963118 NCBI chr22:23,786,966...23,838,009
Ensembl chr22:23,786,931...23,838,009
JBrowse link
suppression by virus of host apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAD BCL2 associated agonist of cell death involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3057092|PMID:15231831) Ensembl
MGI
PMID:15231831 GO_REF:0000107 MGI:3057092 NCBI chr11:64,269,828...64,284,704
Ensembl chr11:64,269,830...64,284,704
JBrowse link
G BCL2L1 BCL2 like 1 acts_upstream_of_or_within IDA (PMID:15231831) MGI PMID:15231831 NCBI chr20:31,664,452...31,723,963
Ensembl chr20:31,664,452...31,723,989
JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG7 autophagy related 7 involved_in IMP (PMID:23290079) CACAO PMID:23290079 NCBI chr 3:11,272,348...11,564,652
Ensembl chr 3:11,272,309...11,557,665
JBrowse link
suppression by virus of host cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP8 caspase 8 involved_in TAS Reactome Reactome:R-HSA-2672196 Reactome:R-HSA-5692550 NCBI chr 2:201,233,443...201,287,711
Ensembl chr 2:201,233,443...201,287,711
JBrowse link
suppression by virus of host STAT1 activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCRIB scribble planar cell polarity protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:143,790,925...143,815,773
Ensembl chr 8:143,790,920...143,815,773
JBrowse link
suppression by virus of host STAT2 activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCRIB scribble planar cell polarity protein involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:143,790,925...143,815,773
Ensembl chr 8:143,790,920...143,815,773
JBrowse link
transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:9630249 RGD:10045968 NCBI chr12:54,280,726...54,287,087
Ensembl chr12:54,280,193...54,287,088
JBrowse link
G HYAL2 hyaluronidase 2 involved_in IDA
ISO
ISS
(PMID:11296287)
suppresses
UniProt
RGD
PMID:11296287 PMID:12584308 GO_REF:0000024 RGD:633153 NCBI chr 3:50,317,802...50,322,768
Ensembl chr 3:50,317,790...50,322,782
JBrowse link
G INSR insulin receptor involved_in IMP (PMID:17001305) BHF-UCL PMID:17001305 NCBI chr19:7,112,257...7,294,414
Ensembl chr19:7,112,255...7,294,414
JBrowse link
G MMP9 matrix metallopeptidase 9 ISO RGD PMID:20000122 RGD:2325807 NCBI chr20:46,008,908...46,016,561
Ensembl chr20:46,008,908...46,016,561
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor involved_in ISO
IEA
RGD
Ensembl
PMID:16256070 GO_REF:0000107 RGD:7207780 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
uncoating of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPIA peptidylprolyl isomerase A involved_in TAS Reactome Reactome:R-HSA-162585 Reactome:R-HSA-173771 NCBI chr 7:44,795,960...44,803,117
Ensembl chr 7:44,796,680...44,824,564
JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP4B charged multivesicular body protein 4B involved_in IMP (PMID:17701905) UniProt PMID:17701905 NCBI chr20:33,811,348...33,854,366
Ensembl chr20:33,811,348...33,854,366
JBrowse link
G CHMP5 charged multivesicular body protein 5 involved_in IMP (PMID:15644320) UniProt PMID:15644320 NCBI chr 9:33,265,049...33,282,070
Ensembl chr 9:33,264,879...33,282,070
JBrowse link
G LRSAM1 leucine rich repeat and sterile alpha motif containing 1 involved_in IMP (PMID:15256501) UniProt PMID:15256501 NCBI chr 9:127,451,486...127,503,501
Ensembl chr 9:127,451,489...127,503,499
JBrowse link
G MVB12A multivesicular body subunit 12A involved_in IBA
IMP
(PMID:21873635)
(PMID:18005716)
GO_Central
UniProt
PMID:18005716 PMID:21873635 NCBI chr19:17,405,741...17,425,332
Ensembl chr19:17,405,722...17,433,724
JBrowse link
G MVB12B multivesicular body subunit 12B involved_in IMP
IBA
(PMID:18005716)
(PMID:21873635)
UniProt
GO_Central
PMID:18005716 PMID:21873635 NCBI chr 9:126,326,829...126,507,040
Ensembl chr 9:126,326,829...126,507,041
JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of IMP (PMID:15126635) BHF-UCL PMID:15126635 NCBI chr15:55,826,917...55,993,612
Ensembl chr15:55,826,922...55,993,660
JBrowse link
G PDCD6IP programmed cell death 6 interacting protein involved_in IDA (PMID:18641129) UniProt PMID:18641129 NCBI chr 3:33,798,630...33,869,703
Ensembl chr 3:33,798,571...33,869,707
JBrowse link
G TSG101 tumor susceptibility 101 involved_in IMP
ISS
(PMID:15126635), (PMID:18005716) BHF-UCL
UniProt
PMID:15126635 PMID:18005716 GO_REF:0000024 NCBI chr11:18,480,311...18,526,942
Ensembl chr11:18,468,336...18,526,951
JBrowse link
G VTA1 vesicle trafficking 1 involved_in IMP (PMID:15644320) UniProt PMID:15644320 NCBI chr 6:142,147,263...142,224,685
Ensembl chr 6:142,147,162...142,224,685
JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP2A charged multivesicular body protein 2A involved_in IMP (PMID:14505570) UniProt PMID:14505570 NCBI chr19:58,551,566...58,555,624
Ensembl chr19:58,551,566...58,555,105
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IMP (PMID:14505570) UniProt PMID:14505570 NCBI chr 2:86,503,430...86,563,443
Ensembl chr 2:86,503,430...86,563,479
JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IMP (PMID:14505570) UniProt PMID:14505570 NCBI chr20:33,811,348...33,854,366
Ensembl chr20:33,811,348...33,854,366
JBrowse link
G CHMP4C charged multivesicular body protein 4C involved_in IMP (PMID:14505570) UniProt PMID:14505570 NCBI chr 8:81,732,448...81,759,515
Ensembl chr 8:81,732,448...81,759,515
JBrowse link
G RNF103-CHMP3 RNF103-CHMP3 readthrough involved_in IMP (PMID:14505570) UniProt PMID:14505570 NCBI chr 2:86,503,430...86,721,122
Ensembl chr 2:86,505,668...86,721,122
JBrowse link
G VPS4A vacuolar protein sorting 4 homolog A involved_in IMP (PMID:16193069), (PMID:17940959) UniProt PMID:16193069 PMID:17940959 NCBI chr16:69,311,350...69,326,939
Ensembl chr16:69,311,350...69,326,939
JBrowse link
G VPS4B vacuolar protein sorting 4 homolog B involved_in IMP (PMID:14505570), (PMID:16193069), (PMID:17940959) UniProt PMID:14505570 PMID:16193069 PMID:17940959 NCBI chr18:63,389,190...63,422,495
Ensembl chr18:63,389,190...63,422,483
JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP1A charged multivesicular body protein 1A involved_in NAS (PMID:20588296) ParkinsonsUK-UCL PMID:20588296 NCBI chr16:89,644,435...89,657,708
Ensembl chr16:89,640,816...89,657,738
JBrowse link
G CHMP1B charged multivesicular body protein 1B involved_in NAS
IDA
(PMID:20588296)
(PMID:24878737)
ParkinsonsUK-UCL
UniProt
PMID:20588296 PMID:24878737 NCBI chr18:11,851,413...11,854,444
Ensembl chr18:11,851,413...11,854,444
JBrowse link
G CHMP2A charged multivesicular body protein 2A involved_in TAS
IMP
IGI
IDA
(PMID:20588296)
(PMID:23051622)
(PMID:24107264)
(PMID:24878737)
ParkinsonsUK-UCL
UniProt
PMID:20588296 PMID:23051622 PMID:24107264 PMID:24878737 NCBI chr19:58,551,566...58,555,624
Ensembl chr19:58,551,566...58,555,105
JBrowse link
G CHMP2B charged multivesicular body protein 2B involved_in IGI
TAS
IMP
IDA
(PMID:24107264)
(PMID:20588296)
(PMID:23051622)
(PMID:24878737)
UniProt
ParkinsonsUK-UCL
PMID:20588296 PMID:23051622 PMID:24107264 PMID:24878737 NCBI chr 3:87,227,309...87,255,556
Ensembl chr 3:87,227,271...87,255,556
JBrowse link
G CHMP3 charged multivesicular body protein 3 involved_in IMP
TAS
IDA
(PMID:16740483), (PMID:23051622)
(PMID:20588296)
(PMID:24878737)
UniProt
ParkinsonsUK-UCL
PMID:16740483 PMID:20588296 PMID:23051622 PMID:24878737 NCBI chr 2:86,503,430...86,563,443
Ensembl chr 2:86,503,430...86,563,479
JBrowse link
G CHMP4A charged multivesicular body protein 4A involved_in TAS
IDA
IGI
(PMID:20588296)
(PMID:24878737)
(PMID:24107264)
ParkinsonsUK-UCL
UniProt
PMID:20588296 PMID:24107264 PMID:24878737 NCBI chr14:24,209,615...24,213,488
Ensembl chr14:24,209,615...24,213,830
JBrowse link
G CHMP4B charged multivesicular body protein 4B involved_in IDA