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ONTOLOGY REPORT - ANNOTATIONS


Term:viral process
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Accession:GO:0016032 term browser browse the term
Definition:A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
Comment:See also the biological process terms 'viral infectious cycle ; GO:0019058' and 'lysogeny ; GO:0030069'.
Synonyms:exact_synonym: virus process
 related_synonym: viral infection;   virulence
 alt_id: GO:0022415
 xref: Wikipedia:Viral_life_cycle


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viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bicd1 BICD cargo adaptor 1 involved_in ISO (PMID:20089649) BHF-UCL PMID:20089649 NCBI chrNW_004955505:3,330,933...3,544,752
Ensembl chrNW_004955505:3,336,803...3,544,752
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:22574148) CACAO PMID:22574148 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) AgBase PMID:12857889 NCBI chrNW_004955415:14,539,284...14,560,614
Ensembl chrNW_004955415:14,536,266...14,560,632
JBrowse link
coreceptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:12915581) BHF-UCL PMID:12915581 NCBI chrNW_004955555:1,959,702...1,985,679 JBrowse link
DNA-templated viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:11096080) UniProt PMID:11096080 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
JBrowse link
early viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt2 cyclin T2 involved_in ISO (PMID:21509660) UniProt PMID:21509660 NCBI chrNW_004955440:2,424,976...2,468,388
Ensembl chrNW_004955440:2,424,978...2,470,811
JBrowse link
G Mon1b MON1 homolog B, secretory trafficking associated involved_in ISO (PMID:21509660) UniProt PMID:21509660 NCBI chrNW_004955522:459,961...470,543
Ensembl chrNW_004955522:461,175...468,740
JBrowse link
endocytosis involved in viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tpcn1 two pore segment channel 1 involved_in ISO (PMID:25722412) UniProt PMID:25722412 NCBI chrNW_004955482:9,538,572...9,594,739
Ensembl chrNW_004955482:9,542,079...9,592,972
JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kpna2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chrNW_004955478:7,121,432...7,134,327
Ensembl chrNW_004955478:7,121,432...7,134,327
JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chrNW_004955452:10,493,025...10,542,898
Ensembl chrNW_004955452:10,492,653...10,542,898
JBrowse link
establishment of viral latency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb3 cAMP responsive element binding protein 3 involved_in ISO (PMID:20091349) UniProt PMID:20091349 NCBI chrNW_004955472:564,227...568,708
Ensembl chrNW_004955472:564,493...568,491
JBrowse link
fusion of virus membrane with host plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas6 growth arrest specific 6 involved_in ISO (PMID:21501828) UniProt PMID:21501828 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809
JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO (PMID:11296287) UniProt PMID:11296287 NCBI chrNW_004955532:2,120,781...2,125,083
Ensembl chrNW_004955532:2,120,781...2,123,726
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:12915581) BHF-UCL PMID:12915581 NCBI chrNW_004955555:1,959,702...1,985,679 JBrowse link
induction by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5544501|PMID:24310610) UniProt PMID:24310610 MGI:5544501 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965
JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:32276428) UniProt PMID:32276428 NCBI chrNW_004955413:4,557,969...4,563,697
Ensembl chrNW_004955413:4,558,259...4,563,582
JBrowse link
induction by virus of host cell-cell fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd4 CD4 molecule involved_in ISO (PMID:9166430) UniProt PMID:9166430 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535
JBrowse link
intracellular transport of viral protein in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynlt1 dynein light chain Tctex-type 1 involved_in ISO (PMID:18647839) UniProt PMID:18647839 NCBI chrNW_004955439:3,833,525...3,842,393
Ensembl chrNW_004955439:3,833,525...3,842,393
JBrowse link
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 involved_in ISO (PMID:19008854) BHF-UCL PMID:19008854 NCBI chrNW_004955425:3,581,705...3,588,528 JBrowse link
intracellular transport of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 involved_in ISO (PMID:25540360) AgBase PMID:25540360 NCBI chrNW_004955432:12,383,582...12,657,491
Ensembl chrNW_004955432:12,353,993...12,658,157
JBrowse link
IRES-dependent viral translational initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1 involved_in ISO (PMID:17947529) FlyBase PMID:17947529 NCBI chrNW_004955435:18,009,228...18,050,329
Ensembl chrNW_004955435:18,008,352...18,050,329
JBrowse link
G Denr density regulated re-initiation and release factor involved_in ISO (PMID:20713520) UniProt PMID:20713520 NCBI chrNW_004955482:5,954,319...5,970,832
Ensembl chrNW_004955482:5,954,319...5,970,916
JBrowse link
G Eif2d eukaryotic translation initiation factor 2D involved_in ISO (PMID:20713520) UniProt PMID:20713520 NCBI chrNW_004955406:42,163,508...42,181,482
Ensembl chrNW_004955406:42,163,632...42,181,337
JBrowse link
G Eif3a eukaryotic translation initiation factor 3 subunit A involved_in ISO (PMID:23766293), (PMID:24357634), (PMID:9573242) UniProt PMID:9573242 PMID:23766293 PMID:24357634 NCBI chrNW_004955431:23,542,842...23,578,892
Ensembl chrNW_004955431:23,543,838...23,578,757
JBrowse link
G Eif3b eukaryotic translation initiation factor 3 subunit B involved_in ISO (PMID:9573242) UniProt PMID:9573242 NCBI chrNW_004955460:12,918,349...12,941,150
Ensembl chrNW_004955460:12,917,389...12,941,126
JBrowse link
G Eif3d eukaryotic translation initiation factor 3 subunit D involved_in ISO (PMID:9573242) UniProt PMID:9573242 NCBI chrNW_004955413:23,096,440...23,110,312
Ensembl chrNW_004955413:23,092,749...23,110,312
JBrowse link
G Eif3f eukaryotic translation initiation factor 3 subunit F involved_in ISO (PMID:9573242) UniProt PMID:9573242 NCBI chrNW_004955414:23,805,406...23,812,776
Ensembl chrNW_004955414:23,804,705...23,817,044
JBrowse link
G Mcts1 MCTS1 re-initiation and release factor involved_in ISO (PMID:20713520) UniProt PMID:20713520 NCBI chrNW_004955572:1,272,870...1,285,190
Ensembl chrNW_004955572:1,272,870...1,285,445
JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:12414943) UniProt PMID:12414943 NCBI chrNW_004955458:747,770...773,885
Ensembl chrNW_004955458:750,226...773,483
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 involved_in ISO (PMID:21518806)
(PMID:17947529)
UniProt
FlyBase
PMID:17947529 PMID:21518806 NCBI chrNW_004955495:6,990,565...7,002,492
Ensembl chrNW_004955495:6,987,182...7,002,492
JBrowse link
G Ssb small RNA binding exonuclease protection factor La involved_in ISO (PMID:12384597) UniProt PMID:12384597 NCBI chrNW_004955449:4,806,468...4,815,175 JBrowse link
late viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnt2 cyclin T2 involved_in ISO (PMID:21509660) UniProt PMID:21509660 NCBI chrNW_004955440:2,424,976...2,468,388
Ensembl chrNW_004955440:2,424,978...2,470,811
JBrowse link
G Mon1b MON1 homolog B, secretory trafficking associated involved_in ISO (PMID:21509660) UniProt PMID:21509660 NCBI chrNW_004955522:459,961...470,543
Ensembl chrNW_004955522:461,175...468,740
JBrowse link
G Usf1 upstream transcription factor 1 involved_in ISO (PMID:2249772) BHF-UCL PMID:2249772 NCBI chrNW_004955468:12,814,810...12,821,383
Ensembl chrNW_004955468:12,814,810...12,821,383
JBrowse link
modulation by host of viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxl2 F-box and leucine rich repeat protein 2 involved_in ISO (PMID:15893726) UniProt PMID:15893726 NCBI chrNW_004955421:512,197...617,524
Ensembl chrNW_004955421:512,158...617,524
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in ISO (PMID:24514761) UniProt PMID:24514761 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
JBrowse link
G Phb prohibitin involved_in ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chrNW_004955451:12,110,290...12,119,870
Ensembl chrNW_004955451:12,110,290...12,120,124
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
modulation by host of viral RNA-binding transcription factor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
modulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc3 proteasome 26S subunit, ATPase 3 involved_in ISO (PMID:2194290), (PMID:8419915) GO_Central PMID:2194290 PMID:8419915 NCBI chrNW_004955422:837,934...843,161
Ensembl chrNW_004955422:837,573...845,341
JBrowse link
modulation by virus of host process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dag1 dystroglycan 1 involved_in ISO (PMID:16254364) UniProt PMID:16254364 NCBI chrNW_004955532:1,446,553...1,465,310
Ensembl chrNW_004955532:1,397,900...1,466,312
JBrowse link
G Rraga Ras related GTP binding A involved_in ISO (PMID:8995684) UniProt PMID:8995684 NCBI chrNW_004955434:21,509,528...21,510,885
Ensembl chrNW_004955434:21,509,529...21,510,470
JBrowse link
G Rxra retinoid X receptor alpha involved_in ISO (PMID:11915042) UniProt PMID:11915042 NCBI chrNW_004955513:3,313,544...3,386,544
Ensembl chrNW_004955513:3,335,897...3,386,994
JBrowse link
G Tyms thymidylate synthetase ISO RGD PMID:1247599 RGD:2317429 NCBI chrNW_004955402:9,295,862...9,304,952
Ensembl chrNW_004955402:9,296,321...9,306,631
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:16227268) UniProt PMID:16227268 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
modulation by virus of host transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntrk3 neurotrophic receptor tyrosine kinase 3 ISO RGD PMID:11175319 RGD:2325644 NCBI chrNW_004955416:16,652,931...17,018,188
Ensembl chrNW_004955416:16,652,791...17,018,188
JBrowse link
negative regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnk cyclin K involved_in ISO (PMID:21555514) CACAO PMID:21555514 NCBI chrNW_004955438:20,826,818...20,850,496
Ensembl chrNW_004955438:20,835,825...20,849,999
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:55926|PMID:6327825) MGI PMID:6327825 MGI:55926 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:24380861) AgBase PMID:24380861 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:25244949) AgBase PMID:25244949 NCBI chrNW_004955439:18,664,230...19,953,358
Ensembl chrNW_004955439:18,664,379...19,951,152
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955402:2,274,248...2,309,461
Ensembl chrNW_004955402:2,270,850...2,298,227
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
G Zbed1 zinc finger BED-type containing 1 involved_in ISO (PMID:25210186) UniProt PMID:25210186 NCBI chrNW_004955499:1,484,850...1,487,143 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:23355615) UniProt PMID:23355615 NCBI chrNW_004955452:15,306,398...15,314,959
Ensembl chrNW_004955452:15,305,775...15,314,959
JBrowse link
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955468:11,388,154...11,389,259
Ensembl chrNW_004955468:11,388,192...11,390,314
JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955448:8,366,795...8,373,010
Ensembl chrNW_004955448:8,366,925...8,372,411
JBrowse link
negative regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:1098064|PMID:9343248)
(MGI:2148352|PMID:11483763)
(MGI:3848729|PMID:19358828)
MGI PMID:9343248 PMID:11483763 PMID:19358828 MGI:1098064 MGI:2148352 MGI:3848729 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:12522210) AgBase PMID:12522210 NCBI chrNW_004955420:25,580,449...25,604,277
Ensembl chrNW_004955420:25,580,359...25,604,331
JBrowse link
negative regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
negative regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brd4 bromodomain containing 4 involved_in ISO (PMID:17690245) FlyBase PMID:17690245 NCBI chrNW_004955495:7,959,033...7,989,216
Ensembl chrNW_004955495:7,957,510...7,988,498
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10841574) UniProt PMID:10841574 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:16540471) UniProt PMID:16540471 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO (PMID:17005673) UniProt PMID:17005673 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:25086213) AgBase PMID:25086213 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979
JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:18774950) UniProt PMID:18774950 NCBI chrNW_004955481:1,651,422...1,674,402
Ensembl chrNW_004955481:1,651,902...1,673,893
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:2833704) UniProt PMID:2833704 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Pou2f3 POU class 2 homeobox 3 involved_in ISO (PMID:14645924) UniProt PMID:14645924 NCBI chrNW_004955412:21,261,389...21,339,602
Ensembl chrNW_004955412:21,260,993...21,342,584
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:7745706) BHF-UCL PMID:7745706 NCBI chrNW_004955486:2,656,121...2,674,808
Ensembl chrNW_004955486:2,656,121...2,674,807
JBrowse link
G Tfap4 transcription factor AP-4 involved_in ISO (PMID:14645924), (PMID:16540471) UniProt PMID:14645924 PMID:16540471 NCBI chrNW_004955442:13,160,467...13,174,288
Ensembl chrNW_004955442:13,160,450...13,175,057
JBrowse link
G Znf639 zinc finger protein 639 involved_in ISO (PMID:20484494) UniProt PMID:20484494 NCBI chrNW_004955420:8,513,192...8,522,689
Ensembl chrNW_004955420:8,516,973...8,522,629
JBrowse link
negative regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:15825084) AgBase PMID:15825084 NCBI chrNW_004955403:8,156,660...8,192,018
Ensembl chrNW_004955403:8,156,660...8,194,762
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955583:277,564...283,422 JBrowse link
negative regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmga2 high mobility group AT-hook 2 involved_in ISO (PMID:17005673) UniProt PMID:17005673 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in ISO (PMID:18774950) UniProt PMID:18774950 NCBI chrNW_004955481:1,651,422...1,674,402
Ensembl chrNW_004955481:1,651,902...1,673,893
JBrowse link
G Morc2 MORC family CW-type zinc finger 2 involved_in ISO (PMID:29211708)
(MGI:6271895|PMID:29728365)
UniProt PMID:29211708 PMID:29728365 MGI:6271895 NCBI chrNW_004955455:5,124,737...5,164,495
Ensembl chrNW_004955455:5,124,737...5,164,495
JBrowse link
G Mphosph8 M-phase phosphoprotein 8 involved_in ISO (PMID:29211708) UniProt PMID:29211708 NCBI chrNW_004955497:518,462...546,748 JBrowse link
G Resf1 retroelement silencing factor 1 involved_in ISO (MGI:6271895|PMID:29728365) UniProt PMID:29728365 MGI:6271895 NCBI chrNW_004955505:3,684,848...3,709,624 JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in ISO (MGI:5440670|PMID:20164836), (MGI:6271895|PMID:29728365) UniProt PMID:20164836 PMID:29728365 MGI:5440670 MGI:6271895 NCBI chrNW_004955588:290,497...338,438
Ensembl chrNW_004955588:290,168...338,426
JBrowse link
G Tasor transcription activation suppressor involved_in ISO (PMID:29211708) UniProt PMID:29211708 NCBI chrNW_004955430:6,440,655...6,480,956
Ensembl chrNW_004955430:6,442,084...6,480,802
JBrowse link
G Trim28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within
ISO (MGI:5440670|PMID:20164836)
(MGI:3842857|PMID:19270682)
UniProt
MGI
PMID:19270682 PMID:20164836 MGI:3842857 MGI:5440670 NCBI chrNW_004955584:1,148,903...1,156,001 JBrowse link
negative regulation of transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbln1 fibulin 1 involved_in ISO (PMID:12200142) UniProt PMID:12200142 NCBI chrNW_004955413:29,837,134...29,911,313
Ensembl chrNW_004955413:29,837,134...29,912,222
JBrowse link
negative regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955468:11,388,154...11,389,259
Ensembl chrNW_004955468:11,388,192...11,390,314
JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826
JBrowse link
G Ciita class II major histocompatibility complex transactivator involved_in ISO (PMID:32855215) UniProt PMID:32855215 NCBI chrNW_004955442:7,600,903...7,647,619
Ensembl chrNW_004955442:7,603,893...7,647,624
JBrowse link
G Fcn1 ficolin 1 involved_in ISO (PMID:22851708) UniProt PMID:22851708 NCBI chrNW_004955513:3,690,550...3,697,785
Ensembl chrNW_004955513:3,687,232...3,698,673
JBrowse link
G Fcn3 ficolin 3 involved_in ISO (PMID:22851708) UniProt PMID:22851708 NCBI chrNW_004955452:6,630,548...6,635,334
Ensembl chrNW_004955452:6,630,505...6,635,235
JBrowse link
G Gsn gelsolin involved_in ISO (PMID:23575248) UniProt PMID:23575248 NCBI chrNW_004955419:6,682,202...6,733,361
Ensembl chrNW_004955419:6,682,058...6,733,361
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955490:7,977,771...8,168,912
Ensembl chrNW_004955490:7,973,211...8,088,427
JBrowse link
G Nbn nibrin ISO RGD PMID:22850678 RGD:8693392 NCBI chrNW_004955417:6,840,916...6,880,479
Ensembl chrNW_004955417:6,839,312...6,880,133
JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955448:8,366,795...8,373,010
Ensembl chrNW_004955448:8,366,925...8,372,411
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO RGD PMID:22850678 RGD:8693392 NCBI chrNW_004955408:3,953,801...4,035,494 JBrowse link
G Snx3 sorting nexin 3 involved_in ISO (PMID:18767904) UniProt PMID:18767904 NCBI chrNW_004955411:33,339,974...33,344,563
Ensembl chrNW_004955411:33,340,274...33,345,500
JBrowse link
G Trim10 tripartite motif containing 10 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955583:268,856...277,079
Ensembl chrNW_004955583:269,266...276,675
JBrowse link
G Trim11 tripartite motif containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955581:114,750...123,410
Ensembl chrNW_004955581:114,750...125,143
JBrowse link
G Trim25 tripartite motif containing 25 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955451:5,918,287...5,934,252
Ensembl chrNW_004955451:5,918,287...5,934,258
JBrowse link
G Trim26 tripartite motif containing 26 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955583:303,081...325,560
Ensembl chrNW_004955583:303,081...325,560
JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955456:16,181,890...16,185,598
Ensembl chrNW_004955456:16,182,453...16,184,669
JBrowse link
G Trim59 tripartite motif containing 59 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955448:10,962,181...10,971,948
Ensembl chrNW_004955448:10,962,549...10,963,736
JBrowse link
G Trim8 tripartite motif containing 8 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955485:7,784,625...7,798,131
Ensembl chrNW_004955485:7,782,794...7,797,022
JBrowse link
negative regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase RNA specific acts_upstream_of_or_within ISO (MGI:4939544|PMID:21173229) MGI PMID:21173229 MGI:4939544 NCBI chrNW_004955545:1,078,319...1,106,938
Ensembl chrNW_004955545:1,078,319...1,106,938
JBrowse link
G Banf1 BAF nuclear assembly factor 1 involved_in ISO (PMID:18005698) UniProt PMID:18005698 NCBI chrNW_004955422:19,337,038...19,338,824
Ensembl chrNW_004955422:19,337,038...19,338,824
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:10490959) BHF-UCL PMID:10490959 NCBI chrNW_004955481:10,293,758...10,301,118
Ensembl chrNW_004955481:10,293,399...10,301,143
JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in ISO (PMID:19189853), (PMID:19840259)
(MGI:5487533|PMID:20038207)
UniProt PMID:19189853 PMID:19840259 PMID:20038207 MGI:5487533 NCBI chrNW_004955441:4,908,318...4,944,343 JBrowse link
G Fam111a FAM111 trypsin like peptidase A involved_in ISO (PMID:23093934) UniProt PMID:23093934 NCBI chrNW_004955511:3,722,483...3,736,001
Ensembl chrNW_004955511:3,731,116...3,740,140
JBrowse link
G Ifi16 interferon gamma inducible protein 16 involved_in ISO (PMID:22291595) UniProt PMID:22291595 NCBI chrNW_004955468:10,828,726...10,845,853 JBrowse link
G Ifih1 interferon induced with helicase C domain 1 involved_in ISO (PMID:33727702) UniProt PMID:33727702 NCBI chrNW_004955449:11,538,869...11,596,502
Ensembl chrNW_004955449:11,538,889...11,593,349
JBrowse link
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 involved_in ISO (PMID:19008854), (PMID:21976647) UniProt PMID:19008854 PMID:21976647 NCBI chrNW_004955425:3,581,705...3,588,528 JBrowse link
G Ifit5 interferon induced protein with tetratricopeptide repeats 5 involved_in ISO (PMID:23774268) UniProt PMID:23774268 NCBI chrNW_004955425:3,569,448...3,575,043 JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:19008854) BHF-UCL PMID:19008854 NCBI chrNW_004955434:23,301,623...23,302,304 JBrowse link
G Ilf3 interleukin enhancer binding factor 3 involved_in ISO (MGI:4867319|PMID:21123651) UniProt PMID:21123651 MGI:4867319 NCBI chrNW_004955495:1,814,012...1,844,605
Ensembl chrNW_004955495:1,827,860...1,844,369
JBrowse link
G Isg15 ISG15 ubiquitin like modifier involved_in ISO (PMID:19357168)
(PMID:33727702)
UniProt PMID:19357168 PMID:33727702 NCBI chrNW_004955486:9,706,878...9,707,876
Ensembl chrNW_004955486:9,706,703...9,707,949
JBrowse link
G Isg20 interferon stimulated exonuclease gene 20 involved_in ISO (PMID:21036379) UniProt PMID:21036379 NCBI chrNW_004955416:16,305,534...16,321,596
Ensembl chrNW_004955416:16,311,499...16,321,102
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:25193851) AgBase PMID:25193851 NCBI chrNW_004955420:25,580,449...25,604,277
Ensembl chrNW_004955420:25,580,359...25,604,331
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:20451243)
(MGI:4881394|PMID:20451243)
UniProt PMID:20451243 MGI:4881394 NCBI chrNW_004955415:14,691,918...14,704,782
Ensembl chrNW_004955415:14,695,438...14,703,672
JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in ISO (PMID:31133753) UniProt PMID:31133753 NCBI chrNW_004955474:6,796,068...6,814,906
Ensembl chrNW_004955474:6,796,066...6,814,906
JBrowse link
G Oas3 2'-5'-oligoadenylate synthetase 3 involved_in ISO (PMID:19056102), (PMID:19923450), (PMID:23196181) UniProt PMID:19056102 PMID:19923450 PMID:23196181 NCBI chrNW_004955482:9,339,174...9,359,266 JBrowse link
G Oasl 2'-5'-oligoadenylate synthetase like involved_in ISO (PMID:18931074), (PMID:20074559) UniProt PMID:18931074 PMID:20074559 NCBI chrNW_004955455:10,658,080...10,682,493
Ensembl chrNW_004955455:10,657,440...10,682,546
JBrowse link
G Parp10 poly(ADP-ribose) polymerase family member 10 involved_in ISO (PMID:22176891) UniProt PMID:22176891 NCBI chrNW_004955454:2,644,718...2,651,962
Ensembl chrNW_004955454:2,645,003...2,651,604
JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in ISO (PMID:15308695)
(MGI:5284800|PMID:15308695)
UniProt PMID:15308695 MGI:5284800 NCBI chrNW_004955474:10,953,381...10,989,100 JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:19264593) BHF-UCL PMID:19264593 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Rnasel ribonuclease L involved_in ISO (PMID:19923450), (PMID:23196181) UniProt PMID:19923450 PMID:23196181 NCBI chrNW_004955406:21,413,950...21,424,860
Ensembl chrNW_004955406:21,411,980...21,425,052
JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in ISO (PMID:21957124)
(MGI:5431072|PMID:21880757)
UniProt PMID:21880757 PMID:21957124 MGI:5431072 NCBI chrNW_004955487:1,988,226...2,001,731
Ensembl chrNW_004955487:1,987,405...2,001,731
JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chrNW_004955495:1,431,677...1,437,035
Ensembl chrNW_004955495:1,431,023...1,440,821
JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO (PMID:12417631) BHF-UCL PMID:12417631 NCBI chrNW_004955437:3,664,290...3,729,832 JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (PMID:12417631) BHF-UCL PMID:12417631 NCBI chrNW_004955410:9,807,936...10,034,760
Ensembl chrNW_004955410:9,811,584...9,942,323
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:10490959) BHF-UCL PMID:10490959 NCBI chrNW_004955437:117,267...119,899
Ensembl chrNW_004955437:117,206...120,700
JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:24882218)
(MGI:5645191|PMID:24882218)
UniProt PMID:24882218 MGI:5645191 NCBI chrNW_004955414:21,495,593...21,513,703
Ensembl chrNW_004955414:21,481,129...21,514,548
JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO (PMID:21102435), (PMID:21876179) UniProt PMID:21102435 PMID:21876179 RGD:8554819 NCBI chrNW_004955494:3,925,478...3,985,469
Ensembl chrNW_004955494:3,926,413...3,983,736
JBrowse link
negative regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 involved_in ISO (PMID:25086213) AgBase PMID:25086213 NCBI chrNW_004955405:43,124,447...43,128,873
Ensembl chrNW_004955405:43,124,510...43,130,979
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:19207730), (PMID:22347431) UniProt PMID:19207730 PMID:22347431 NCBI chrNW_004955456:7,381,923...7,383,203 JBrowse link
negative regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apcs amyloid P component, serum involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955468:11,388,154...11,389,259
Ensembl chrNW_004955468:11,388,192...11,390,314
JBrowse link
G Crebbp CREB binding protein involved_in ISO (MGI:2151262|PMID:11583620) CAFA PMID:11583620 MGI:2151262 NCBI chrNW_004955442:13,559,496...13,691,913
Ensembl chrNW_004955442:13,559,496...13,692,004
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:25193851) AgBase PMID:25193851 NCBI chrNW_004955420:25,580,449...25,604,277
Ensembl chrNW_004955420:25,580,359...25,604,331
JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004955425:7,704,371...7,708,951
Ensembl chrNW_004955425:7,702,137...7,709,006
JBrowse link
negative regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mid2 midline 2 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955490:7,977,771...8,168,912
Ensembl chrNW_004955490:7,973,211...8,088,427
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Trim11 tripartite motif containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955581:114,750...123,410
Ensembl chrNW_004955581:114,750...125,143
JBrowse link
G Trim13 tripartite motif containing 13 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955431:3,324,331...3,395,724
Ensembl chrNW_004955431:3,324,331...3,395,724
JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955583:277,564...283,422 JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955414:20,066,109...20,077,331
Ensembl chrNW_004955414:20,070,359...20,077,595
JBrowse link
G Trim25 tripartite motif containing 25 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955451:5,918,287...5,934,252
Ensembl chrNW_004955451:5,918,287...5,934,258
JBrowse link
G Trim26 tripartite motif containing 26 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955583:303,081...325,560
Ensembl chrNW_004955583:303,081...325,560
JBrowse link
G Trim27 tripartite motif containing 27 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955465:13,891,001...13,902,767
Ensembl chrNW_004955465:13,890,900...13,903,016
JBrowse link
G Trim28 tripartite motif containing 28 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955584:1,148,903...1,156,001 JBrowse link
G Trim32 tripartite motif containing 32 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955419:11,151,751...11,168,046
Ensembl chrNW_004955419:11,151,751...11,168,041
JBrowse link
G Trim35 tripartite motif containing 35 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955403:49,821,150...49,841,634
Ensembl chrNW_004955403:49,823,222...49,841,617
JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955456:16,181,890...16,185,598
Ensembl chrNW_004955456:16,182,453...16,184,669
JBrowse link
G Trim8 tripartite motif containing 8 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955485:7,784,625...7,798,131
Ensembl chrNW_004955485:7,782,794...7,797,022
JBrowse link
negative regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Larp7 La ribonucleoprotein 7, transcriptional regulator involved_in ISO (PMID:18249148), (PMID:18483487) FlyBase PMID:18249148 PMID:18483487 NCBI chrNW_004955457:14,178,674...14,200,164
Ensembl chrNW_004955457:14,178,947...14,192,193
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955490:7,977,771...8,168,912
Ensembl chrNW_004955490:7,973,211...8,088,427
JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:16873258) BHF-UCL PMID:16873258 NCBI chrNW_004955453:4,774,739...4,856,238 JBrowse link
G Trim11 tripartite motif containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955581:114,750...123,410
Ensembl chrNW_004955581:114,750...125,143
JBrowse link
G Trim13 tripartite motif containing 13 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955431:3,324,331...3,395,724
Ensembl chrNW_004955431:3,324,331...3,395,724
JBrowse link
G Trim14 tripartite motif containing 14 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955419:27,390,098...27,420,727
Ensembl chrNW_004955419:27,390,173...27,419,681
JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955414:20,066,109...20,077,331
Ensembl chrNW_004955414:20,070,359...20,077,595
JBrowse link
G Trim27 tripartite motif containing 27 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955465:13,891,001...13,902,767
Ensembl chrNW_004955465:13,890,900...13,903,016
JBrowse link
G Trim32 tripartite motif containing 32 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955419:11,151,751...11,168,046
Ensembl chrNW_004955419:11,151,751...11,168,041
JBrowse link
G Trim62 tripartite motif containing 62 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955452:11,348,001...11,377,413
Ensembl chrNW_004955452:11,347,741...11,378,040
JBrowse link
G Trim8 tripartite motif containing 8 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955485:7,784,625...7,798,131
Ensembl chrNW_004955485:7,782,794...7,797,022
JBrowse link
G Ubp1 upstream binding protein 1 involved_in ISO (PMID:8114710) GO_Central PMID:8114710 NCBI chrNW_004955421:618,696...681,994
Ensembl chrNW_004955421:618,696...681,994
JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:14679154) UniProt PMID:14679154 NCBI chrNW_004955468:152,744...155,140
Ensembl chrNW_004955468:152,744...155,140
JBrowse link
negative stranded viral RNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg16l1 autophagy related 16 like 1 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chrNW_004955453:2,884,497...2,917,581
Ensembl chrNW_004955453:2,880,928...2,917,581
JBrowse link
G Atg16l2 autophagy related 16 like 2 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chrNW_004955414:18,600,904...18,618,048
Ensembl chrNW_004955414:18,604,505...18,618,046
JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chrNW_004955411:31,501,191...31,646,407
Ensembl chrNW_004955411:31,522,420...31,646,827
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
positive regulation by host of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in ISO (MGI:5787727|PMID:26581985) AgBase PMID:26581985 MGI:5787727 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) AgBase PMID:15989969 NCBI chrNW_004955450:11,241,279...11,246,628
Ensembl chrNW_004955450:11,241,279...11,249,056
JBrowse link
G Stom stomatin involved_in ISO (MGI:5616479|PMID:25262680) AgBase PMID:25262680 MGI:5616479 NCBI chrNW_004955419:6,642,807...6,673,407
Ensembl chrNW_004955419:6,643,012...6,675,513
JBrowse link
G Tbc1d20 TBC1 domain family member 20 involved_in ISO (PMID:17686842) AgBase PMID:17686842 NCBI chrNW_004955597:291,541...313,799
Ensembl chrNW_004955597:291,541...314,292
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955402:2,274,248...2,309,461
Ensembl chrNW_004955402:2,270,850...2,298,227
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
G Ythdc2 YTH domain containing 2 involved_in ISO (PMID:21559518) AgBase PMID:21559518 NCBI chrNW_004955408:33,380,822...33,448,188
Ensembl chrNW_004955408:33,381,023...33,446,239
JBrowse link
positive regulation by host of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) AgBase PMID:25593157 NCBI chrNW_004955450:14,545,586...14,574,161
Ensembl chrNW_004955450:14,512,381...14,574,696
JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:25122793) AgBase PMID:25122793 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888
JBrowse link
G Cav2 caveolin 2 involved_in ISO (PMID:25556234) AgBase PMID:25556234 NCBI chrNW_004955432:22,240,041...22,242,200 JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:1098064|PMID:9343248)
(MGI:2148352|PMID:11483763)
MGI PMID:9343248 PMID:11483763 MGI:1098064 MGI:2148352 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Cfl1 cofilin 1 involved_in ISO (PMID:25556234) AgBase PMID:25556234 NCBI chrNW_004955422:19,479,181...19,482,571
Ensembl chrNW_004955422:19,479,181...19,482,571
JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chrNW_004955415:4,434,486...4,462,505
Ensembl chrNW_004955415:4,434,453...4,461,751
JBrowse link
G Ifng interferon gamma involved_in ISO (MGI:4840165|PMID:20889566) ARUK-UCL PMID:20889566 MGI:4840165 NCBI chrNW_004955458:14,643,333...14,648,020
Ensembl chrNW_004955458:14,643,313...14,648,045
JBrowse link
G Igf2r insulin like growth factor 2 receptor involved_in ISO (PMID:20889566) ARUK-UCL PMID:20889566 NCBI chrNW_004955439:20,754,915...20,874,759
Ensembl chrNW_004955439:20,752,855...20,851,281
JBrowse link
G Pc pyruvate carboxylase involved_in ISO (PMID:23861867) AgBase PMID:23861867 NCBI chrNW_004955422:18,421,100...18,536,591
Ensembl chrNW_004955422:18,420,596...18,536,436
JBrowse link
G Ppib peptidylprolyl isomerase B involved_in ISO (PMID:15989969) AgBase PMID:15989969 NCBI chrNW_004955450:11,241,279...11,246,628
Ensembl chrNW_004955450:11,241,279...11,249,056
JBrowse link
positive regulation by host of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav2 caveolin 2 involved_in ISO (PMID:25556234) AgBase PMID:25556234 NCBI chrNW_004955432:22,240,041...22,242,200 JBrowse link
G Pc pyruvate carboxylase involved_in ISO (PMID:23861867) AgBase PMID:23861867 NCBI chrNW_004955422:18,421,100...18,536,591
Ensembl chrNW_004955422:18,420,596...18,536,436
JBrowse link
G Vapa VAMP associated protein A involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955402:2,274,248...2,309,461
Ensembl chrNW_004955402:2,270,850...2,298,227
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:19515777) AgBase PMID:19515777 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
positive regulation by host of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd1 chromodomain helicase DNA binding protein 1 involved_in ISO (PMID:25297984) CACAO PMID:25297984 NCBI chrNW_004955418:14,200,618...14,268,361
Ensembl chrNW_004955418:14,200,617...14,268,361
JBrowse link
G Ctdp1 CTD phosphatase subunit 1 involved_in ISO (PMID:15723517) CAFA PMID:15723517 NCBI chrNW_004955402:62,817,822...62,914,250
Ensembl chrNW_004955402:62,817,974...62,914,276
JBrowse link
G Ep300 E1A binding protein p300 involved_in ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 involved_in ISO (PMID:26748656) AgBase PMID:26748656 NCBI chrNW_004955524:3,037,825...3,044,296
Ensembl chrNW_004955524:3,036,953...3,044,296
JBrowse link
G Hpn hepsin involved_in ISO (PMID:15614436) UniProt PMID:15614436 NCBI chrNW_004955468:4,384,630...4,399,881
Ensembl chrNW_004955468:4,384,630...4,400,379
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:2833704) UniProt PMID:2833704 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO (PMID:7657162) UniProt PMID:7657162 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698
JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
G Rrp1b ribosomal RNA processing 1B involved_in ISO (PMID:26311876) UniProt PMID:26311876 NCBI chrNW_004955407:38,553,866...38,577,547
Ensembl chrNW_004955407:38,553,814...38,577,465
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 involved_in ISO (PMID:16687403) BHF-UCL PMID:16687403 NCBI chrNW_004955455:8,420,263...8,457,105
Ensembl chrNW_004955455:8,415,839...8,457,097
JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:15905409)
(PMID:19818711)
UniProt PMID:15905409 PMID:19818711 NCBI chrNW_004955438:1,561,562...1,601,492
Ensembl chrNW_004955438:1,561,568...1,601,492
JBrowse link
G Sp1 Sp1 transcription factor involved_in ISO (PMID:2833704) UniProt PMID:2833704 NCBI chrNW_004955458:644,435...677,360
Ensembl chrNW_004955458:644,378...677,441
JBrowse link
G Taf11 TATA-box binding protein associated factor 11 involved_in ISO (PMID:9108034) UniProt PMID:9108034 NCBI chrNW_004955437:2,908,939...2,916,154
Ensembl chrNW_004955437:2,908,939...2,916,154
JBrowse link
G Tfap4 transcription factor AP-4 involved_in ISO (PMID:2833704) UniProt PMID:2833704 NCBI chrNW_004955442:13,160,467...13,174,288
Ensembl chrNW_004955442:13,160,450...13,175,057
JBrowse link
G Znf639 zinc finger protein 639 involved_in ISO (PMID:20484494) UniProt PMID:20484494 NCBI chrNW_004955420:8,513,192...8,522,689
Ensembl chrNW_004955420:8,516,973...8,522,629
JBrowse link
positive regulation by virus of viral protein levels in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:23137809) AgBase PMID:23137809 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO (PMID:18160438) AgBase PMID:18160438 NCBI chrNW_004955450:9,923,560...9,947,519
Ensembl chrNW_004955450:9,923,560...9,942,658
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO (PMID:23907398) AgBase PMID:23907398 NCBI chrNW_004955445:8,971,585...9,003,647 JBrowse link
G Tbc1d20 TBC1 domain family member 20 involved_in ISO (PMID:17686842) AgBase PMID:17686842 NCBI chrNW_004955597:291,541...313,799
Ensembl chrNW_004955597:291,541...314,292
JBrowse link
positive regulation of apoptotic process by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2 associated agonist of cell death acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Bcl2l11 BCL2 like 11 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chrNW_004955470:2,740,682...2,780,225 JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 involved_in ISO (PMID:24514761) UniProt PMID:24514761 NCBI chrNW_004955498:566,741...594,837
Ensembl chrNW_004955498:566,688...595,360
JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Top2a DNA topoisomerase II alpha involved_in ISO (PMID:16712776) UniProt PMID:16712776 NCBI chrNW_004955451:14,928,273...14,964,855
Ensembl chrNW_004955451:14,929,136...14,964,723
JBrowse link
G Top2b DNA topoisomerase II beta involved_in ISO (PMID:16712776) UniProt PMID:16712776 NCBI chrNW_004955430:17,457,603...17,523,115
Ensembl chrNW_004955430:17,457,603...17,507,012
JBrowse link
positive regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) UniProt PMID:11595185 PMID:15218037 NCBI chrNW_004955414:33,154,812...33,193,769
Ensembl chrNW_004955414:33,154,812...33,193,769
JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in ISO (PMID:15218037) UniProt PMID:15218037 NCBI chrNW_004955482:5,879,273...5,884,217
Ensembl chrNW_004955482:5,859,234...5,884,665
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chrNW_004955484:7,368,938...7,375,964 JBrowse link
positive regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bsg basigin (Ok blood group) involved_in ISO (PMID:11353871), (PMID:15688292)
(PMID:29739904)
UniProt PMID:11353871 PMID:15688292 PMID:29739904 NCBI chrNW_004955495:7,148,806...7,156,296 JBrowse link
G Cd4 CD4 molecule involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535
JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:24942581) CAFA PMID:24942581 NCBI chrNW_004955415:4,129,151...4,138,336
Ensembl chrNW_004955415:4,129,254...4,137,826
JBrowse link
G Lgals1 galectin 1 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chrNW_004955413:24,072,086...24,075,452
Ensembl chrNW_004955413:24,072,086...24,075,452
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chrNW_004955481:5,234,125...5,249,564 JBrowse link
G Nectin1 nectin cell adhesion molecule 1 involved_in ISO (PMID:11277703) AgBase PMID:11277703 NCBI chrNW_004955412:20,683,007...20,745,069
Ensembl chrNW_004955412:20,682,861...20,745,069
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:21670307) UniProt PMID:21670307 NCBI chrNW_004955506:1,307,932...1,322,011
Ensembl chrNW_004955506:1,307,932...1,324,027
JBrowse link
G Tmprss2 transmembrane serine protease 2 involved_in ISO (PMID:21068237), (PMID:24227843), (PMID:32404436) UniProt PMID:21068237 PMID:24227843 PMID:32404436 NCBI chrNW_004955407:40,958,562...40,985,415
Ensembl chrNW_004955407:40,957,122...40,976,644
JBrowse link
G Tmprss4 transmembrane serine protease 4 involved_in ISO (PMID:32404436) UniProt PMID:32404436 NCBI chrNW_004955412:19,258,955...19,292,766
Ensembl chrNW_004955412:19,258,949...19,292,829
JBrowse link
G Trim11 tripartite motif containing 11 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)
UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955581:114,750...123,410
Ensembl chrNW_004955581:114,750...125,143
JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004955414:20,066,109...20,077,331
Ensembl chrNW_004955414:20,070,359...20,077,595
JBrowse link
positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase RNA specific involved_in ISO (PMID:18362360)
(MGI:5447606|PMID:18362360)
(PMID:19651874)
UniProt PMID:18362360 PMID:19651874 MGI:5447606 NCBI chrNW_004955545:1,078,319...1,106,938
Ensembl chrNW_004955545:1,078,319...1,106,938
JBrowse link
G Adarb1 adenosine deaminase RNA specific B1 involved_in ISO (PMID:21289159) UniProt PMID:21289159 NCBI chrNW_004955407:41,886,286...41,962,846
Ensembl chrNW_004955407:41,886,286...41,962,897
JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:23386060) UniProt PMID:23386060 NCBI chrNW_004955463:285,228...306,077
Ensembl chrNW_004955463:285,228...306,077
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:23137809) AgBase PMID:23137809 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:20862261) AgBase PMID:20862261 NCBI chrNW_004955565:1,387,043...1,403,624
Ensembl chrNW_004955565:1,386,973...1,404,220
JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 (inactive) involved_in ISO (PMID:26567527) AgBase PMID:26567527 NCBI chrNW_004955456:14,291,445...14,318,310
Ensembl chrNW_004955456:14,291,260...14,318,310
JBrowse link
G Hacd3 3-hydroxyacyl-CoA dehydratase 3 involved_in ISO (PMID:18160438) AgBase PMID:18160438 NCBI chrNW_004955450:9,923,560...9,947,519
Ensembl chrNW_004955450:9,923,560...9,942,658
JBrowse link
G Ifit1 interferon induced protein with tetratricopeptide repeats 1 involved_in ISO (PMID:19416887) BHF-UCL PMID:19416887 NCBI chrNW_004955425:3,581,705...3,588,528 JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chrNW_004955408:9,002,443...9,080,938
Ensembl chrNW_004955408:9,002,458...9,080,938
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5693363|PMID:21191019) AgBase PMID:21191019 MGI:5693363 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
G Nr5a2 nuclear receptor subfamily 5 group A member 2 involved_in ISO (PMID:19264593) BHF-UCL PMID:19264593 NCBI chrNW_004955406:36,263,257...36,415,494
Ensembl chrNW_004955406:36,263,184...36,415,525
JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chrNW_004955417:15,872,906...15,885,246
Ensembl chrNW_004955417:15,868,934...15,885,247
JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:15231837) UniProt PMID:15231837 NCBI chrNW_004955430:7,272,911...7,277,726
Ensembl chrNW_004955430:7,272,765...7,277,726
JBrowse link
G Pkn2 protein kinase N2 involved_in ISO (PMID:15364941) AgBase PMID:15364941 NCBI chrNW_004955423:5,467,017...5,575,435
Ensembl chrNW_004955423:5,467,017...5,575,620
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of_or_within ISO (PMID:22479552) ARUK-UCL PMID:22479552 NCBI chrNW_004955413:30,306,563...30,366,245
Ensembl chrNW_004955413:30,307,219...30,359,500
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chrNW_004955456:7,381,923...7,383,203 JBrowse link
G Ppid peptidylprolyl isomerase D involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chrNW_004955471:12,309,224...12,323,198
Ensembl chrNW_004955471:12,305,236...12,323,198
JBrowse link
G Ppie peptidylprolyl isomerase E involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chrNW_004955452:17,242,255...17,256,776
Ensembl chrNW_004955452:17,242,286...17,254,860
JBrowse link
G Ppih peptidylprolyl isomerase H involved_in ISO (PMID:19932913) UniProt PMID:19932913 NCBI chrNW_004955537:2,211,566...2,229,444
Ensembl chrNW_004955537:2,211,410...2,230,452
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:20614012) UniProt PMID:20614012 NCBI chrNW_004955415:31,991,478...31,997,277
Ensembl chrNW_004955415:31,991,479...32,000,250
JBrowse link
G Srpk1 SRSF protein kinase 1 involved_in ISO (PMID:20498328) BHF-UCL PMID:20498328 NCBI chrNW_004955437:3,664,290...3,729,832 JBrowse link
G Srpk2 SRSF protein kinase 2 involved_in ISO (PMID:20498328) BHF-UCL PMID:20498328 NCBI chrNW_004955410:9,807,936...10,034,760
Ensembl chrNW_004955410:9,811,584...9,942,323
JBrowse link
G Stau1 staufen double-stranded RNA binding protein 1 involved_in ISO (PMID:23907398) AgBase PMID:23907398 NCBI chrNW_004955445:8,971,585...9,003,647 JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:11641396) UniProt PMID:11641396 NCBI chrNW_004955458:793,753...798,755
Ensembl chrNW_004955458:793,759...798,806
JBrowse link
G Tmem39a transmembrane protein 39A involved_in ISO (PMID:31849860) UniProt PMID:31849860 NCBI chrNW_004955427:19,118,631...19,184,315
Ensembl chrNW_004955427:19,133,434...19,184,344
JBrowse link
G Vapb VAMP associated protein B and C involved_in ISO (PMID:16227268) UniProt PMID:16227268 NCBI chrNW_004955445:1,098,454...1,122,879
Ensembl chrNW_004955445:1,098,454...1,120,823
JBrowse link
positive regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:25593157) AgBase PMID:25593157 NCBI chrNW_004955450:14,545,586...14,574,161
Ensembl chrNW_004955450:14,512,381...14,574,696
JBrowse link
G Axl AXL receptor tyrosine kinase involved_in ISO (PMID:22673088) FlyBase PMID:22673088 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565
JBrowse link
G Clec4g C-type lectin domain family 4 member G involved_in ISO (PMID:22673088) FlyBase PMID:22673088 NCBI chrNW_004955563:1,571,374...1,574,901
Ensembl chrNW_004955563:1,571,288...1,575,979
JBrowse link
G Kpna2 karyopherin subunit alpha 2 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chrNW_004955478:7,121,432...7,134,327
Ensembl chrNW_004955478:7,121,432...7,134,327
JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564)
(PMID:28189564)
MGI PMID:28189564 MGI:5898166 NCBI chrNW_004955452:10,493,025...10,542,898
Ensembl chrNW_004955452:10,492,653...10,542,898
JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in ISO (PMID:22673088) FlyBase PMID:22673088 NCBI chrNW_004955416:8,361,722...8,377,629
Ensembl chrNW_004955416:8,359,207...8,377,692
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chrNW_004955484:7,368,938...7,375,964 JBrowse link
positive regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) CACAO PMID:22072966 NCBI chrNW_004955429:15,103,792...15,167,498 JBrowse link
G Stom stomatin involved_in ISO (MGI:5616479|PMID:25262680) AgBase PMID:25262680 MGI:5616479 NCBI chrNW_004955419:6,642,807...6,673,407
Ensembl chrNW_004955419:6,643,012...6,675,513
JBrowse link
G Tmem250 transmembrane protein 250 involved_in ISO (PMID:21667337) UniProt PMID:21667337 NCBI chrNW_004955513:4,520,445...4,524,203
Ensembl chrNW_004955513:4,520,445...4,524,203
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (MGI:5619479|PMID:17940959) UniProt PMID:17940959 MGI:5619479 NCBI chrNW_004955484:7,368,938...7,375,964 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (MGI:5619479|PMID:17940959) UniProt PMID:17940959 MGI:5619479 NCBI chrNW_004955402:47,154,350...47,183,979
Ensembl chrNW_004955402:47,154,007...47,184,021
JBrowse link
positive regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:23051622) UniProt PMID:23051622 NCBI chrNW_004955584:1,156,828...1,160,056
Ensembl chrNW_004955584:1,156,828...1,160,056
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO (PMID:23051622) UniProt PMID:23051622 NCBI chrNW_004955407:6,014,478...6,047,916
Ensembl chrNW_004955407:6,014,478...6,047,916
JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in ISO (PMID:23137809) AgBase PMID:23137809 NCBI chrNW_004955511:6,209,777...6,233,594
Ensembl chrNW_004955511:6,209,777...6,233,594
JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:11595185), (PMID:15218037) UniProt PMID:11595185 PMID:15218037 NCBI chrNW_004955414:33,154,812...33,193,769
Ensembl chrNW_004955414:33,154,812...33,193,769
JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in ISO (PMID:15218037) UniProt PMID:15218037 NCBI chrNW_004955482:5,879,273...5,884,217
Ensembl chrNW_004955482:5,859,234...5,884,665
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chrNW_004955484:7,368,938...7,375,964 JBrowse link
positive regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:11096080) UniProt PMID:11096080 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO from cytomegalovirus immediate-early promoter RGD PMID:11746500 RGD:2293493 NCBI chrNW_004955446:11,022,091...11,090,136
Ensembl chrNW_004955446:11,021,971...11,090,136
JBrowse link
G Mdfic MyoD family inhibitor domain containing involved_in ISO (PMID:10671520) UniProt PMID:10671520 NCBI chrNW_004955432:20,790,404...20,869,521
Ensembl chrNW_004955432:20,808,499...20,871,886
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5693363|PMID:21191019) AgBase PMID:21191019 MGI:5693363 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
G Pfn1 profilin 1 ISO RGD PMID:12740026 RGD:2324854 NCBI chrNW_004955467:10,357,838...10,360,651
Ensembl chrNW_004955467:10,357,838...10,360,651
JBrowse link
G Rsf1 remodeling and spacing factor 1 involved_in ISO (PMID:11788598) UniProt PMID:11788598 NCBI chrNW_004955414:14,084,812...14,212,162
Ensembl chrNW_004955414:14,084,812...14,212,156
JBrowse link
positive regulation of viral translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:16680162) UniProt PMID:16680162 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403
JBrowse link
G Cav2 caveolin 2 involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chrNW_004955432:22,240,041...22,242,200 JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chrNW_004955464:7,569,570...7,688,098
Ensembl chrNW_004955464:7,569,566...7,688,098
JBrowse link
G Kiaa0319l KIAA0319 like acts_upstream_of_or_within ISO (MGI:5750797|PMID:26814968) MGI PMID:26814968 MGI:5750797 NCBI chrNW_004955452:13,538,524...13,649,823
Ensembl chrNW_004955452:13,507,010...13,646,751
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:32221306) UniProt PMID:32221306 NCBI chrNW_004955457:6,749,226...6,841,855
Ensembl chrNW_004955457:6,748,534...6,842,489
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:32221306) UniProt PMID:32221306 NCBI chrNW_004955422:16,899,730...16,923,962 JBrowse link
receptor-mediated virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in ISO (PMID:18343844), (PMID:32221306) BHF-UCL PMID:18343844 PMID:32221306 NCBI chrNW_004955519:2,591,229...2,643,705
Ensembl chrNW_004955519:2,591,248...2,633,495
JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:21501828) UniProt PMID:21501828 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809
JBrowse link
G Icam1 intercellular adhesion molecule 1 involved_in ISO (PMID:2538243) BHF-UCL PMID:2538243 NCBI chrNW_004955495:1,561,464...1,573,282
Ensembl chrNW_004955495:1,561,714...1,574,755
JBrowse link
G Lrrc15 leucine rich repeat containing 15 involved_in ISO (PMID:18385238) UniProt PMID:18385238 NCBI chrNW_004955420:14,401,080...14,410,277
Ensembl chrNW_004955420:14,407,926...14,409,656
JBrowse link
regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcl8 C-X-C motif chemokine ligand 8 involved_in ISO (PMID:11483765) UniProt PMID:11483765 NCBI chrNW_004955474:247,326...250,355
Ensembl chrNW_004955474:241,501...250,643
JBrowse link
regulation of viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snf8 SNF8 subunit of ESCRT-II involved_in ISO (PMID:22978549) UniProt PMID:22978549 NCBI chrNW_004955451:12,396,625...12,406,014
Ensembl chrNW_004955451:12,396,625...12,406,014
JBrowse link
regulation of viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in ISO (PMID:12138164) UniProt PMID:12138164 NCBI chrNW_004955526:2,418,217...2,652,025
Ensembl chrNW_004955526:2,636,579...2,652,405
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:11602758) CACAO PMID:11602758 NCBI chrNW_004955555:1,959,702...1,985,679 JBrowse link
G Trim25 tripartite motif containing 25 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955451:5,918,287...5,934,252
Ensembl chrNW_004955451:5,918,287...5,934,258
JBrowse link
G Trim62 tripartite motif containing 62 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955452:11,348,001...11,377,413
Ensembl chrNW_004955452:11,347,741...11,378,040
JBrowse link
regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator involved_in ISO (MGI:3700400|PMID:16950491) UniProt PMID:16950491 MGI:3700400 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Ddx5 DEAD-box helicase 5 ISO RGD PMID:19224332 RGD:5128521 NCBI chrNW_004955478:7,367,049...7,375,043
Ensembl chrNW_004955478:7,366,956...7,376,358
JBrowse link
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:3718936|PMID:17613256) MGI PMID:17613256 MGI:3718936 NCBI chrNW_004955438:17,374,899...17,431,599
Ensembl chrNW_004955438:17,382,493...17,431,797
JBrowse link
G Ppia peptidylprolyl isomerase A involved_in ISO (PMID:11250896) UniProt PMID:11250896 NCBI chrNW_004955456:7,381,923...7,383,203 JBrowse link
regulation of viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamp3 lysosomal associated membrane protein 3 involved_in ISO (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
regulation of viral process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxcr4 C-X-C motif chemokine receptor 4 ISO RGD PMID:9060691 RGD:11352687 NCBI chrNW_004955440:3,456,165...3,460,024
Ensembl chrNW_004955440:3,455,153...3,460,109
JBrowse link
regulation of viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trim25 tripartite motif containing 25 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955451:5,918,287...5,934,252
Ensembl chrNW_004955451:5,918,287...5,934,258
JBrowse link
G Trim62 tripartite motif containing 62 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004955452:11,348,001...11,377,413
Ensembl chrNW_004955452:11,347,741...11,378,040
JBrowse link
G Tsg101 tumor susceptibility 101 NOT|involved_in ISO (PMID:11595185) UniProt PMID:11595185 NCBI chrNW_004955414:33,154,812...33,193,769
Ensembl chrNW_004955414:33,154,812...33,193,769
JBrowse link
regulation of viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:11641396) UniProt PMID:11641396 NCBI chrNW_004955458:793,753...798,755
Ensembl chrNW_004955458:793,759...798,806
JBrowse link
release from viral latency term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb3 cAMP responsive element binding protein 3 involved_in ISO (PMID:20091349) UniProt PMID:20091349 NCBI chrNW_004955472:564,227...568,708
Ensembl chrNW_004955472:564,493...568,491
JBrowse link
G Hcfc1 host cell factor C1 involved_in ISO (MGI:3687690|PMID:9990006) UniProt PMID:9990006 MGI:3687690 NCBI chrNW_004955580:616,477...636,849
Ensembl chrNW_004955580:616,477...635,597
JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:25116364) ParkinsonsUK-UCL PMID:25116364 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 acts_upstream_of_or_within ISO (PMID:14963118) MGI PMID:14963118 NCBI chrNW_004955455:8,420,263...8,457,105
Ensembl chrNW_004955455:8,415,839...8,457,097
JBrowse link
suppression by virus of host apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2 associated agonist of cell death acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Bcl2l1 BCL2 like 1 acts_upstream_of_or_within ISO (PMID:15231831) MGI PMID:15231831 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
JBrowse link
suppression by virus of host autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg7 autophagy related 7 involved_in ISO (PMID:23290079) CACAO PMID:23290079 NCBI chrNW_004955429:14,076,976...14,301,034
Ensembl chrNW_004955429:14,076,960...14,304,236
JBrowse link
transformation of host cell by virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ISO RGD PMID:9630249 RGD:10045968 NCBI chrNW_004955458:1,530,163...1,536,874 JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISO suppresses
(PMID:11296287)
RGD
UniProt
PMID:11296287 PMID:12584308 RGD:633153 NCBI chrNW_004955532:2,120,781...2,125,083
Ensembl chrNW_004955532:2,120,781...2,123,726
JBrowse link
G Insr insulin receptor involved_in ISO (PMID:17001305) BHF-UCL PMID:17001305 NCBI chrNW_004955563:1,867,400...2,011,845
Ensembl chrNW_004955563:1,867,400...2,009,149
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:20000122 RGD:2325807 NCBI chrNW_004955445:11,295,500...11,303,322
Ensembl chrNW_004955445:11,295,448...11,303,288
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:16256070 RGD:7207780 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
viral budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:17701905) UniProt PMID:17701905 NCBI chrNW_004955422:27,482,239...27,526,798
Ensembl chrNW_004955422:27,478,698...27,526,575
JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:15256501) UniProt PMID:15256501 NCBI chrNW_004955419:1,121,127...1,154,356
Ensembl chrNW_004955419:1,121,127...1,154,356
JBrowse link
G Mvb12a multivesicular body subunit 12A involved_in ISO (PMID:18005716) UniProt PMID:18005716 NCBI chrNW_004955524:839,328...842,160
Ensembl chrNW_004955524:839,328...840,664
JBrowse link
G Mvb12b multivesicular body subunit 12B involved_in ISO (PMID:18005716) UniProt PMID:18005716 NCBI chrNW_004955419:1,949,211...2,116,525
Ensembl chrNW_004955419:1,949,156...2,104,098
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of ISO (PMID:15126635) BHF-UCL PMID:15126635 NCBI chrNW_004955409:183,645...281,252
Ensembl chrNW_004955409:183,545...281,318
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (PMID:18641129) UniProt PMID:18641129 NCBI chrNW_004955421:1,034,843...1,109,637
Ensembl chrNW_004955421:1,034,843...1,110,438
JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:15126635), (PMID:18005716)
(MGI:3850622|PMID:15256501)
BHF-UCL
UniProt
PMID:15126635 PMID:15256501 PMID:18005716 MGI:3850622 NCBI chrNW_004955414:33,154,812...33,193,769
Ensembl chrNW_004955414:33,154,812...33,193,769
JBrowse link
G Vta1 vesicle trafficking 1 involved_in ISO (PMID:15644320) UniProt PMID:15644320 NCBI chrNW_004955436:18,017,190...18,072,285
Ensembl chrNW_004955436:18,017,190...18,072,335
JBrowse link
viral budding from plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chrNW_004955584:1,156,828...1,160,056
Ensembl chrNW_004955584:1,156,828...1,160,056
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chrNW_004955422:27,482,239...27,526,798
Ensembl chrNW_004955422:27,478,698...27,526,575
JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in ISO (PMID:14505570) UniProt PMID:14505570 NCBI chrNW_004955417:96,674...135,601
Ensembl chrNW_004955417:96,865...137,739
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:16193069), (PMID:17940959) UniProt PMID:16193069 PMID:17940959 NCBI chrNW_004955484:7,368,938...7,375,964 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:14505570), (PMID:16193069), (PMID:17940959) UniProt PMID:14505570 PMID:16193069 PMID:17940959 NCBI chrNW_004955402:47,154,350...47,183,979
Ensembl chrNW_004955402:47,154,007...47,184,021
JBrowse link
viral budding via host ESCRT complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chrNW_004955402:1,196,912...1,199,480 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:24107264)
(PMID:24878737)
(PMID:23051622)
UniProt PMID:23051622 PMID:24107264 PMID:24878737 NCBI chrNW_004955584:1,156,828...1,160,056
Ensembl chrNW_004955584:1,156,828...1,160,056
JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in ISO (PMID:23051622)
(PMID:24107264)
(PMID:24878737)
UniProt PMID:23051622 PMID:24107264 PMID:24878737 NCBI chrNW_004955407:6,014,478...6,047,916
Ensembl chrNW_004955407:6,014,478...6,047,916
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:24878737)
(PMID:24107264)
UniProt PMID:24107264 PMID:24878737 NCBI chrNW_004955422:27,482,239...27,526,798
Ensembl chrNW_004955422:27,478,698...27,526,575
JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in ISO (PMID:24878737) UniProt PMID:24878737 NCBI chrNW_004955506:1,987,710...1,994,731
Ensembl chrNW_004955506:1,987,195...1,994,666
JBrowse link
G Mitd1 microtubule interacting and trafficking domain containing 1 NOT|involved_in ISO (PMID:23045692) UniProt PMID:23045692 NCBI chrNW_004955470:5,493,361...5,509,437
Ensembl chrNW_004955470:5,493,144...5,509,437
JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (PMID:24107264) UniProt PMID:24107264 NCBI chrNW_004955421:1,034,843...1,109,637
Ensembl chrNW_004955421:1,034,843...1,110,438
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:24107264) UniProt PMID:24107264 NCBI chrNW_004955484:7,368,938...7,375,964 JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in ISO (PMID:24107264) UniProt PMID:24107264 NCBI chrNW_004955402:47,154,350...47,183,979
Ensembl chrNW_004955402:47,154,007...47,184,021
JBrowse link
viral capsid secondary envelopment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ist1 IST1 factor associated with ESCRT-III involved_in ISO (PMID:19129479) UniProt PMID:19129479 NCBI chrNW_004955484:4,589,311...4,630,464
Ensembl chrNW_004955484:4,589,311...4,630,203
JBrowse link
viral entry into host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in ISO (PMID:16051304), (PMID:32221306), (PMID:33000221), (PMID:33082294), (PMID:33713620) UniProt PMID:16051304 PMID:32221306 PMID:33000221 PMID:33082294 PMID:33713620 NCBI chrNW_004955519:2,591,229...2,643,705
Ensembl chrNW_004955519:2,591,248...2,633,495
JBrowse link
G Agtr1 angiotensin II receptor type 1 involved_in ISO (PMID:33713620) UniProt PMID:33713620 NCBI chrNW_004955474:8,733,942...8,781,305
Ensembl chrNW_004955474:8,733,942...8,781,255
JBrowse link
G Avpr1b arginine vasopressin receptor 1B involved_in ISO (PMID:33713620) UniProt PMID:33713620 NCBI chrNW_004955406:41,706,088...41,716,173
Ensembl chrNW_004955406:41,705,305...41,716,173
JBrowse link
G Axl AXL receptor tyrosine kinase involved_in ISO (PMID:21047970) CACAO PMID:21047970 NCBI chrNW_004955555:189,445...218,509
Ensembl chrNW_004955555:189,174...218,565
JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:49235|PMID:1719235) MGI PMID:1719235 MGI:49235 NCBI chrNW_004955555:426,894...446,235 JBrowse link
G Clec4g C-type lectin domain family 4 member G involved_in ISO (PMID:16051304), (PMID:24623090) FlyBase PMID:16051304 PMID:24623090 NCBI chrNW_004955563:1,571,374...1,574,901
Ensembl chrNW_004955563:1,571,288...1,575,979
JBrowse link
G Ctsb cathepsin B involved_in ISO (MGI:5640952|PMID:15831716) CACAO PMID:15831716 MGI:5640952 NCBI chrNW_004955403:53,086,236...53,100,217
Ensembl chrNW_004955403:53,085,574...53,093,809
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:20202662) CACAO PMID:20202662 NCBI chrNW_004955464:7,569,570...7,688,098
Ensembl chrNW_004955464:7,569,566...7,688,098
JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO (PMID:21501828) UniProt PMID:21501828 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809
JBrowse link
G Gpr15 G protein-coupled receptor 15 involved_in ISO (PMID:15650194) UniProt PMID:15650194 NCBI chrNW_004955427:115,513...137,557
Ensembl chrNW_004955427:115,513...119,710
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO (PMID:23029581) CACAO PMID:23029581 NCBI chrNW_004955422:18,173,438...18,192,357
Ensembl chrNW_004955422:18,170,616...18,192,412
JBrowse link
G Hyal2 hyaluronidase 2 ISO facilitates RGD PMID:12584308 RGD:633153 NCBI chrNW_004955532:2,120,781...2,125,083
Ensembl chrNW_004955532:2,120,781...2,123,726
JBrowse link
G Itgav integrin subunit alpha V involved_in ISO (PMID:25063885) UniProt PMID:25063885 NCBI chrNW_004955403:11,588,536...11,669,809
Ensembl chrNW_004955403:11,592,339...11,659,297
JBrowse link
G Itgb3 integrin subunit beta 3 involved_in ISO (PMID:25063885) UniProt PMID:25063885 NCBI chrNW_004955478:9,788,192...9,830,254 JBrowse link
G Lamp3 lysosomal associated membrane protein 3 NOT|involved_in ISO (PMID:21810281) ParkinsonsUK-UCL PMID:21810281 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO RGD PMID:12584355 RGD:1599797 NCBI chrNW_004955412:20,683,007...20,745,069
Ensembl chrNW_004955412:20,682,861...20,745,069
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:21866101), (PMID:21866103)
(MGI:5289741|PMID:21866103), (MGI:5619456|PMID:21866101)
CACAO PMID:21866101 PMID:21866103 MGI:5289741 MGI:5619456 NCBI chrNW_004955402:11,699,434...11,742,899
Ensembl chrNW_004955402:11,699,434...11,742,899
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:33000221), (PMID:33082294) UniProt PMID:33000221 PMID:33082294 NCBI chrNW_004955462:4,101,997...4,241,012
Ensembl chrNW_004955462:4,101,999...4,241,012
JBrowse link
G Phb prohibitin involved_in ISO (MGI:6436975|PMID:29324904) UniProt PMID:29324904 MGI:6436975 NCBI chrNW_004955451:12,110,290...12,119,870
Ensembl chrNW_004955451:12,110,290...12,120,124
JBrowse link
G Siglec1 sialic acid binding Ig like lectin 1 involved_in ISO (PMID:12857889) AgBase PMID:12857889 NCBI chrNW_004955415:14,539,284...14,560,614
Ensembl chrNW_004955415:14,536,266...14,560,632
JBrowse link
G Slc3a2 solute carrier family 3 member 2 involved_in ISO (PMID:30341327) UniProt PMID:30341327 NCBI chrNW_004955599:376,133...391,434
Ensembl chrNW_004955599:376,245...391,311
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:22573858) UniProt PMID:22573858 NCBI chrNW_004955414:22,117,929...22,121,744
Ensembl chrNW_004955414:22,117,930...22,121,744
JBrowse link
G Uvrag UV radiation resistance associated acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chrNW_004955414:15,733,116...16,043,555
Ensembl chrNW_004955414:15,731,519...16,043,555
JBrowse link
G Vamp8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:24550300) MGI PMID:24550300 NCBI chrNW_004955424:1,922,830...1,926,844
Ensembl chrNW_004955424:1,923,092...1,926,728
JBrowse link
G Vps16 VPS16 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chrNW_004955415:13,791,611...13,813,500
Ensembl chrNW_004955415:13,791,611...13,813,500
JBrowse link
G Vps18 VPS18 core subunit of CORVET and HOPS complexes acts_upstream_of_or_within ISO (MGI:5552992|PMID:24550300) MGI PMID:24550300 MGI:5552992 NCBI chrNW_004955416:7,772,653...7,780,408
Ensembl chrNW_004955416:7,772,653...7,782,542
JBrowse link
G Znf639 zinc finger protein 639 involved_in ISO (PMID:20484494) UniProt PMID:20484494 NCBI chrNW_004955420:8,513,192...8,522,689
Ensembl chrNW_004955420:8,516,973...8,522,629
JBrowse link
viral exocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP ribosylation factor like GTPase 8B involved_in ISO (PMID:33157038)
(MGI:6508519|PMID:33157038)
UniProt PMID:33157038 MGI:6508519 NCBI chrNW_004955421:8,231,337...8,276,907
Ensembl chrNW_004955421:8,231,582...8,276,907
JBrowse link
viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas6 growth arrest specific 6 involved_in ISO (PMID:21501828) UniProt PMID:21501828 NCBI chrNW_004955404:276,397...303,864
Ensembl chrNW_004955404:275,946...304,809
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO (PMID:23029581) CACAO PMID:23029581 NCBI chrNW_004955422:18,173,438...18,192,357
Ensembl chrNW_004955422:18,170,616...18,192,412
JBrowse link
G Kpna6 karyopherin subunit alpha 6 acts_upstream_of_or_within ISO (MGI:5898166|PMID:28189564) MGI PMID:28189564 MGI:5898166 NCBI chrNW_004955452:10,493,025...10,542,898
Ensembl chrNW_004955452:10,492,653...10,542,898
JBrowse link
G Vcp valosin containing protein involved_in ISO (PMID:22379090) CACAO PMID:22379090 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
viral life cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Furin furin, paired basic amino acid cleaving enzyme involved_in ISO (PMID:8940009) BHF-UCL PMID:8940009 NCBI chrNW_004955416:14,915,031...14,947,634
Ensembl chrNW_004955416:14,936,546...14,949,252
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO (PMID:8940009)
(MGI:3799615|PMID:8940009)
BHF-UCL PMID:8940009 MGI:3799615 NCBI chrNW_004955512:2,914,834...3,333,440
Ensembl chrNW_004955512:2,917,243...3,333,688
JBrowse link
viral protein processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spcs1 signal peptidase complex subunit 1 involved_in ISO (PMID:27383988) UniProt PMID:27383988 NCBI chrNW_004955430:2,689,927...2,692,119
Ensembl chrNW_004955430:2,689,927...2,692,119
JBrowse link
G Spcs3 signal peptidase complex subunit 3 involved_in ISO (PMID:27383988) UniProt PMID:27383988 NCBI chrNW_004955403:31,451,426...31,461,032
Ensembl chrNW_004955403:31,454,710...31,461,826
JBrowse link
viral release from host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ist1 IST1 factor associated with ESCRT-III involved_in ISO (PMID:19129479) UniProt PMID:19129479 NCBI chrNW_004955484:4,589,311...4,630,464
Ensembl chrNW_004955484:4,589,311...4,630,203
JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:22072966) CACAO PMID:22072966 NCBI chrNW_004955429:15,103,792...15,167,498 JBrowse link
viral replication complex formation and maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chrNW_004955442:19,446,955...19,594,790
Ensembl chrNW_004955442:19,446,955...19,598,725
JBrowse link
viral RNA genome packaging term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx6 DEAD-box helicase 6 involved_in ISO (PMID:22022269) CACAO PMID:22022269 NCBI chrNW_004955412:19,854,785...19,889,422
Ensembl chrNW_004955412:19,854,785...19,889,426
JBrowse link
G Pc pyruvate carboxylase involved_in ISO (PMID:23861867) AgBase PMID:23861867 NCBI chrNW_004955422:18,421,100...18,536,591
Ensembl chrNW_004955422:18,420,596...18,536,436
JBrowse link
viral RNA genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chrNW_004955452:2,255,940...2,299,042
Ensembl chrNW_004955452:2,255,117...2,299,042
JBrowse link
G Eea1 early endosome antigen 1 involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chrNW_004955405:29,760,332...29,959,553
Ensembl chrNW_004955405:29,760,332...29,868,755
JBrowse link
G Pcbp1 poly(rC) binding protein 1 involved_in ISO (PMID:12414943) UniProt PMID:12414943 NCBI chrNW_004955424:15,045,642...15,047,184
Ensembl chrNW_004955424:15,046,011...15,047,081
JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:12414943) UniProt PMID:12414943 NCBI chrNW_004955458:747,770...773,885
Ensembl chrNW_004955458:750,226...773,483
JBrowse link
G Pi4ka phosphatidylinositol 4-kinase alpha involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chrNW_004955442:19,446,955...19,594,790
Ensembl chrNW_004955442:19,446,955...19,598,725
JBrowse link
G Pik3c2g phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chrNW_004955413:14,454,376...14,764,323
Ensembl chrNW_004955413:14,454,377...14,764,558
JBrowse link
G Rab29 RAB29, member RAS oncogene family involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chrNW_004955406:41,452,733...41,468,467
Ensembl chrNW_004955406:41,462,534...41,468,948
JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chrNW_004955430:11,991,548...12,040,003 JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (PMID:19376974) ParkinsonsUK-UCL PMID:19376974 NCBI chrNW_004955487:5,856,190...5,972,408
Ensembl chrNW_004955487:5,859,204...5,972,401
JBrowse link
viral transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gtf2b general transcription factor IIB involved_in ISO (PMID:14644612)
(PMID:24441171)
GO_Central PMID:14644612 PMID:24441171 NCBI chrNW_004955423:5,420,795...5,447,148
Ensembl chrNW_004955423:5,420,584...5,447,148
JBrowse link
viral translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 involved_in ISO (MGI:5700304|PMID:16601681) UniProt PMID:16601681 MGI:5700304 NCBI chrNW_004955416:6,897,897...7,005,602
Ensembl chrNW_004955416:6,897,848...7,009,965
JBrowse link
viral translational frameshifting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO (PMID:30682371) UniProt PMID:30682371 NCBI chrNW_004955495:1,431,677...1,437,035
Ensembl chrNW_004955495:1,431,023...1,440,821
JBrowse link
viral translational termination-reinitiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif3a eukaryotic translation initiation factor 3 subunit A involved_in ISO (PMID:21347434) UniProt PMID:21347434 NCBI chrNW_004955431:23,542,842...23,578,892
Ensembl chrNW_004955431:23,543,838...23,578,757
JBrowse link
G Eif3b eukaryotic translation initiation factor 3 subunit B involved_in ISO (PMID:21347434) UniProt PMID:21347434 NCBI chrNW_004955460:12,918,349...12,941,150
Ensembl chrNW_004955460:12,917,389...12,941,126
JBrowse link
G Eif3d eukaryotic translation initiation factor 3 subunit D involved_in ISO (PMID:21347434) UniProt PMID:21347434 NCBI chrNW_004955413:23,096,440...23,110,312
Ensembl chrNW_004955413:23,092,749...23,110,312
JBrowse link
G Eif3g eukaryotic translation initiation factor 3 subunit G involved_in ISO (PMID:21347434) UniProt PMID:21347434 NCBI chrNW_004955495:1,452,806...1,456,834
Ensembl chrNW_004955495:1,451,454...1,457,216
JBrowse link
G Eif3l eukaryotic translation initiation factor 3 subunit L involved_in ISO (PMID:21347434) UniProt PMID:21347434 NCBI chrNW_004955413:24,220,188...24,250,786
Ensembl chrNW_004955413:24,220,188...24,254,176
JBrowse link
virion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:25122793) AgBase PMID:25122793 NCBI chrNW_004955555:1,998,170...2,002,003
Ensembl chrNW_004955555:1,999,711...2,001,888
JBrowse link
G Rab1a RAB1A, member RAS oncogene family involved_in ISO (PMID:21680502) UniProt PMID:21680502 NCBI chrNW_004955424:19,393,589...19,421,373
Ensembl chrNW_004955424:19,393,589...19,421,373
JBrowse link
G Rab1b RAB1B, member RAS oncogene family involved_in
NOT|involved_in
ISO (PMID:21680502) UniProt PMID:21680502 NCBI chrNW_004955422:19,039,741...19,047,088
Ensembl chrNW_004955422:19,039,632...19,047,088
JBrowse link
G Rab43 RAB43, member RAS oncogene family involved_in ISO (PMID:21680502) UniProt PMID:21680502 NCBI chrNW_004955429:13,474,460...13,506,979
Ensembl chrNW_004955429:13,474,460...13,506,979
JBrowse link
G Spcs1 signal peptidase complex subunit 1 involved_in ISO (PMID:24009510), (PMID:29593046) UniProt PMID:24009510 PMID:29593046 NCBI chrNW_004955430:2,689,927...2,692,119
Ensembl chrNW_004955430:2,689,927...2,692,119
JBrowse link
G Tbc1d20 TBC1 domain family member 20 involved_in ISO (PMID:21680502) UniProt PMID:21680502 NCBI chrNW_004955597:291,541...313,799
Ensembl chrNW_004955597:291,541...314,292
JBrowse link
G Usp6nl USP6 N-terminal like involved_in ISO (PMID:21680502) UniProt PMID:21680502 NCBI chrNW_004955421:27,469,652...27,593,771
Ensembl chrNW_004955421:27,471,483...27,593,775
JBrowse link
virion attachment to host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO (PMID:24098578) CACAO PMID:24098578 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
virus maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mvb12a multivesicular body subunit 12A involved_in ISO (PMID:18005716) UniProt PMID:18005716 NCBI chrNW_004955524:839,328...842,160
Ensembl chrNW_004955524:839,328...840,664
JBrowse link
G Mvb12b multivesicular body subunit 12B involved_in ISO (PMID:18005716) UniProt PMID:18005716 NCBI chrNW_004955419:1,949,211...2,116,525
Ensembl chrNW_004955419:1,949,156...2,104,098
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11940
    viral process 275
      IRES-dependent viral translational initiation 11
      cap snatching 0
      establishment of viral latency + 1
      genome retention in viral capsid 0
      latency-replication decision 0
      latent virus replication + 3
      lysis of host organelle involved in viral entry into host cell + 0
      maintenance of viral latency 0
      modulation by virus of host process + 19
      negative regulation by host of viral process + 14
      negative regulation of viral process + 75
      permeabilization of host organelle membrane involved in viral entry into host cell + 0
      pore formation by virus in membrane of host cell 0
      positive regulation by host of viral process + 17
      positive regulation of viral process + 64
      recruitment of helicase-primase complex to DNA lesions 0
      regulation of defense response to virus by virus + 0
      regulation of viral process + 140
      release from viral latency + 3
      ribosomal skipping 0
      superinfection exclusion 0
      transport of virus + 13
      uncoating of virus 0
      viral DNA repair + 0
      viral RNA editing 0
      viral budding + 18
      viral capsid assembly + 0
      viral capsid secondary envelopment 1
      viral gene expression + 66
      viral genome circularization 0
      viral genome integration into host DNA 0
      viral genome maturation + 0
      viral genome packaging + 2
      viral genome replication + 99
      viral head-tail joining 0
      viral latency + 3
      viral life cycle + 202
      viral protein processing 2
      viral release from host cell + 31
      viral replication complex formation and maintenance 1
      viral scaffold assembly and maintenance 0
      viral tail assembly + 0
      viral transcription + 49
      viral translation + 16
      viral translational frameshifting 1
      viral translational termination-reinitiation 5
      viral tropism switching 0
      virion assembly + 27
      virion maturation 0
      virus baseplate assembly 0
      virus maturation + 2
      virus tail fiber assembly 0
paths to the root