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ONTOLOGY REPORT - ANNOTATIONS


Term:energy derivation by oxidation of organic compounds
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Accession:GO:0015980 term browser browse the term
Definition:The chemical reactions and pathways by which a cell derives energy from organic compounds; results in the oxidation of the compounds from which energy is released.
Synonyms:exact_synonym: chemoorganotrophy


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aerobic electron transport chain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COX3 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:8,627...9,410 JBrowse link
G Slc25a51 solute carrier family 25 member 51 involved_in
acts_upstream_of
ISO (PMID:33087354)
(PMID:33262325)
UniProt PMID:33087354 PMID:33262325 NCBI chrNW_004936524:5,666,773...5,688,789 JBrowse link
aerobic respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase ISO RGD PMID:3777158 RGD:1598765 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:612,255...614,894 JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex 1 subunit 1 involved_in ISO (PMID:22309213) UniProt PMID:22309213 NCBI chrNW_004936646:186,422...190,870 JBrowse link
G Cat catalase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3050704|PMID:15178682) MGI
Ensembl
PMID:15178682 GO_REF:0000107 MGI:3050704 NCBI chrNW_004936533:3,601,270...3,637,128 JBrowse link
G COX1 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:5,347...6,888 JBrowse link
G Fxn frataxin acts_upstream_of_or_within ISO (MGI:3611157|PMID:16278235)
(MGI:2158372|PMID:9405681)
MGI PMID:9405681 PMID:16278235 MGI:2158372 MGI:3611157 NCBI chrNW_004936503:5,323,206...5,343,228 JBrowse link
G LOC101967907 protoheme IX farnesyltransferase, mitochondrial acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3640032|PMID:16782876) MGI
Ensembl
PMID:16782876 GO_REF:0000107 MGI:3640032 NCBI chrNW_004936724:783,591...905,625 JBrowse link
G LOC101968471 cytochrome b-c1 complex subunit 9 involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936657:3,686,019...3,688,730 JBrowse link
G Mdh2 malate dehydrogenase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,194,074...2,208,626 JBrowse link
G Mtfr1 mitochondrial fission regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:8,171,020...8,223,712 JBrowse link
G Mtfr2 mitochondrial fission regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:3,656,639...3,670,923 JBrowse link
G Oxa1l OXA1L mitochondrial inner membrane protein involved_in ISO (PMID:7991568) UniProt PMID:7991568 NCBI chrNW_004936722:1,524,116...1,528,659 JBrowse link
G Pank2 pantothenate kinase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5461110|PMID:22983956) MGI
Ensembl
PMID:22983956 GO_REF:0000107 MGI:5461110 NCBI chrNW_004936485:14,785,050...14,804,258 JBrowse link
G Sirt3 sirtuin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:63,131...78,536 JBrowse link
G Ucn urocortin ISO negative regulation RGD PMID:11597609 RGD:5508185 NCBI chrNW_004936493:5,258,574...5,260,692 JBrowse link
ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ND4 NADH dehydrogenase subunit 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:10,186...11,563 JBrowse link
G ND4L NADH dehydrogenase subunit 4L involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr MT:9,896...10,192 JBrowse link
G ND5 NADH dehydrogenase subunit 5 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:11,763...13,580 JBrowse link
G Ndufa7 NADH:ubiquinone oxidoreductase subunit A7 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936588:5,149,669...5,154,557 JBrowse link
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936631:2,503,353...2,538,957 JBrowse link
cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator ISO RGD PMID:12460673 RGD:628373 NCBI chrNW_004936664:2,968,103...2,973,652 JBrowse link
G Coq10a coenzyme Q10A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936646:672,202...676,140 JBrowse link
G Coq10b coenzyme Q10B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936506:1,694,516...1,718,994 JBrowse link
G LOC101969421 cytochrome P450 1A2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:73448|PMID:7761462) MGI
Ensembl
PMID:7761462 GO_REF:0000107 MGI:73448 NCBI chrNW_004936471:33,704,616...33,709,455 JBrowse link
G Lyrm7 LYR motif containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:3,812,284...3,837,754 JBrowse link
G Mtln mitoregulin involved_in ISO (MGI:6393021|PMID:31296841) UniProt PMID:31296841 MGI:6393021 NCBI chrNW_004943304:685...1,449 JBrowse link
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936631:2,503,353...2,538,957 JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:13,829,093...13,932,202 JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:2665260|PMID:12750314) MGI PMID:12750314 MGI:2665260 NCBI chrNW_004936475:18,462,424...18,557,832 JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2665260|PMID:12750314) MGI
Ensembl
PMID:12750314 GO_REF:0000107 MGI:2665260 NCBI chrNW_004936722:178,866...187,847 JBrowse link
G Nr4a3 nuclear receptor subfamily 4 group A member 3 involved_in ISO (MGI:5645208|PMID:18325999) UniProt PMID:18325999 MGI:5645208 NCBI chrNW_004936524:8,252,321...8,290,747 JBrowse link
G Sdhaf4 succinate dehydrogenase complex assembly factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936618:2,451,717...2,461,676 JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936585:4,061,297...4,215,912 JBrowse link
G Slc25a25 solute carrier family 25 member 25 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4947900|PMID:21296886) MGI
Ensembl
PMID:21296886 GO_REF:0000107 MGI:4947900 NCBI chrNW_004936487:15,661,133...15,696,267 JBrowse link
energy reserve metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrf5 adhesion G protein-coupled receptor F5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5448109|PMID:22971422) MGI
Ensembl
PMID:22971422 GO_REF:0000107 MGI:5448109 NCBI chrNW_004936476:13,414,087...13,503,926 JBrowse link
G Kl klotho acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1927946|PMID:11095966) MGI
Ensembl
PMID:11095966 GO_REF:0000107 MGI:1927946 NCBI chrNW_004936472:27,604,681...27,649,613 JBrowse link
G LOC101968976 leptin ISO RGD PMID:12058043 RGD:625499 NCBI chrNW_004936479:15,394,966...15,411,334 JBrowse link
G LOC101971027 neuroendocrine secretory protein 55 acts_upstream_of_or_within ISO (MGI:1354139|PMID:10712433) MGI PMID:10712433 MGI:1354139 NCBI chrNW_004936530:1,353,432...1,407,437 JBrowse link
G Mc4r melanocortin 4 receptor ISO RGD PMID:14988515 RGD:1600780 NCBI chrNW_004936497:4,636,370...4,638,205 JBrowse link
G Mrap2 melanocortin 2 receptor accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:6,905,870...6,945,583 JBrowse link
G Mt3 metallothionein 3 involved_in ISO (MGI:5299282|PMID:21726645) UniProt PMID:21726645 MGI:5299282 NCBI chrNW_004936475:8,864,512...8,866,516 JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5632243|PMID:25139234) MGI
Ensembl
PMID:25139234 GO_REF:0000107 MGI:5632243 NCBI chrNW_004936474:158,376...282,310 JBrowse link
G Prlh prolactin releasing hormone acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3831610|PMID:19033670) MGI
Ensembl
PMID:19033670 GO_REF:0000107 MGI:3831610
glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldha lactate dehydrogenase A acts_upstream_of_or_within ISO (MGI:62497|PMID:8224816) MGI PMID:8224816 MGI:62497 NCBI chrNW_004936528:866,607...879,977 JBrowse link
glycerophosphate shuttle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpd1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1927687|PMID:11147825) MGI
Ensembl
PMID:11147825 GO_REF:0000107 MGI:1927687 NCBI chrNW_004936512:7,762,325...7,770,007 JBrowse link
glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO (MGI:4412440|PMID:18459129) BHF-UCL PMID:18459129 MGI:4412440 NCBI chrNW_004936571:2,761,254...2,797,045 JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6161945|PMID:28536304) MGI
Ensembl
PMID:28536304 GO_REF:0000107 MGI:6161945 NCBI chrNW_004936625:761,013...819,826 JBrowse link
G Gck glucokinase ISO RGD PMID:17028192 RGD:1581879 NCBI chrNW_004936478:19,104,477...19,118,915 JBrowse link
G Gyg1 glycogenin 1 involved_in ISO
IEA
RGD
Ensembl
PMID:8224611 PMID:10710493 GO_REF:0000107 RGD:2303736 RGD:2304070 NCBI chrNW_004936519:6,582,286...6,613,440 JBrowse link
G Gyg2 glycogenin 2 involved_in ISO (PMID:9857012) UniProt PMID:9857012 NCBI chrNW_004936644:3,493,875...3,515,419 JBrowse link
G Gys1 glycogen synthase 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3052259|PMID:15282316) RGD
Ensembl
UniProt
InterPro
MGI
PMID:6449198 PMID:7671134 PMID:15282316 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 MGI:3052259 RGD:1642743 RGD:2303748 NCBI chrNW_004936664:2,978,546...2,995,145 JBrowse link
G Gys2 glycogen synthase 2 involved_in ISO
IEA
RGD
InterPro
UniProt
Ensembl
PMID:114169 PMID:6449198 PMID:15138155 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 RGD:1582633 RGD:1642743 RGD:2304128 NCBI chrNW_004936548:5,256,185...5,309,758 JBrowse link
G LOC101958945 1,4-alpha-glucan-branching enzyme involved_in ISO
IEA
RGD
InterPro
Ensembl
PMID:6449198 GO_REF:0000002 GO_REF:0000107 RGD:1642743 NCBI chrNW_004936505:2,077,206...2,242,079 JBrowse link
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6161945|PMID:28536304) MGI
Ensembl
PMID:28536304 GO_REF:0000107 MGI:6161945 NCBI chrNW_004936552:3,891,350...3,893,566 JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858 JBrowse link
G Per2 period circadian regulator 2 involved_in ISO (MGI:4429726|PMID:20159955) UniProt PMID:20159955 MGI:4429726 NCBI chrNW_004936525:221,601...263,284 JBrowse link
G Phkg1 phosphorylase kinase catalytic subunit gamma 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936543:7,870,081...7,876,033 JBrowse link
G Phkg2 phosphorylase kinase catalytic subunit gamma 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936501:13,139,182...13,150,507 JBrowse link
G Ppp1r3c protein phosphatase 1 regulatory subunit 3C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1353778|PMID:10683377) MGI
Ensembl
UniProt
PMID:10683377 GO_REF:0000104 GO_REF:0000107 MGI:1353778 NCBI chrNW_004936601:2,930,250...2,935,024 JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3583413|PMID:15857891) MGI
Ensembl
PMID:15857891 GO_REF:0000107 MGI:3583413 NCBI chrNW_004936569:1,258,678...1,266,925 JBrowse link
G Ptges3 prostaglandin E synthase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3714109|PMID:17438133) MGI
Ensembl
PMID:17438133 GO_REF:0000107 MGI:3714109 NCBI chrNW_004936646:969,674...990,532 JBrowse link
G Ugp2 UDP-glucose pyrophosphorylase 2 involved_in IEA UniProt
Ensembl
GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936491:8,773,910...8,834,984 JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 ISO RGD PMID:17911346 RGD:5129142 NCBI chrNW_004936486:4,400,467...4,401,588 JBrowse link
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase ISO RGD PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 NCBI chrNW_004937224:23,225...32,639 JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1351534|PMID:10625614) MGI
Ensembl
PMID:10625614 GO_REF:0000107 MGI:1351534 NCBI chrNW_004936490:17,605,865...17,614,754 JBrowse link
G Gaa alpha glucosidase acts_upstream_of_or_within
involved_in
ISO (MGI:2179452|PMID:10838256)
(MGI:2157196|PMID:11785984)
(MGI:2136118|PMID:11328962)
(PMID:29061980), (PMID:9505277)
RGD
MGI
UniProt
PMID:2193931 PMID:8710802 PMID:9505277 PMID:10838256 PMID:11328962 More... MGI:2136118 MGI:2157196 MGI:2179452 RGD:1599504 RGD:1599506 NCBI chrNW_004936594:4,125,595...4,142,261 JBrowse link
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4356361|PMID:19696889) MGI
Ensembl
PMID:19696889 GO_REF:0000107 MGI:4356361 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
G Pygb glycogen phosphorylase B ISO RGD PMID:10634496 PMID:11071367 PMID:16226229 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chrNW_004936620:533,574...575,893 JBrowse link
G Pygl glycogen phosphorylase L ISO RGD PMID:114169 PMID:6449198 PMID:15152027 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chrNW_004936495:14,692,688...14,728,663 JBrowse link
G Pygm glycogen phosphorylase, muscle associated involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3052259|PMID:15282316), (MGI:4844074|PMID:17689562)
(MGI:4844074|PMID:17689562)
RGD
Ensembl
MGI
PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 More... GO_REF:0000107 MGI:3052259 MGI:4844074 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chrNW_004936599:4,551,164...4,564,109 JBrowse link
G Stbd1 starch binding domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936676:300,244...304,206 JBrowse link
glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase acts_upstream_of_or_within ISO (MGI:2157196|PMID:11785984) MGI PMID:11785984 MGI:2157196 NCBI chrNW_004937224:23,225...32,639 JBrowse link
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2673047|PMID:12783884) MGI
Ensembl
PMID:12783884 GO_REF:0000107 MGI:2673047 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5501393|PMID:23663739), (MGI:5607479|PMID:24914213), (MGI:5616018|PMID:25416783)
(MGI:5906209|PMID:21552327)
(MGI:6094295|PMID:28973665)
MGI
Ensembl
PMID:21552327 PMID:23663739 PMID:24914213 PMID:25416783 PMID:28973665 GO_REF:0000107 MGI:5501393 MGI:5607479 MGI:5616018 MGI:5906209 MGI:6094295 NCBI chrNW_004936625:761,013...819,826 JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:80692|PMID:8640227) MGI
Ensembl
PMID:8640227 GO_REF:0000107 MGI:80692 NCBI chrNW_004936490:17,605,865...17,614,754 JBrowse link
G Gaa alpha glucosidase acts_upstream_of_or_within ISO (MGI:1195358|PMID:9384603), (MGI:1346721|PMID:10547605), (MGI:3664400|PMID:12115977), (MGI:3706473|PMID:15207257)
(MGI:1275872|PMID:9668092), (MGI:2151980|PMID:11590121), (MGI:3618942|PMID:15169761)
MGI PMID:9384603 PMID:9668092 PMID:10547605 PMID:11590121 PMID:12115977 More... MGI:1195358 MGI:1275872 MGI:1346721 MGI:2151980 MGI:3618942 MGI:3664400 MGI:3706473 NCBI chrNW_004936594:4,125,595...4,142,261 JBrowse link
G Gnmt glycine N-methyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3842675|PMID:17937387) MGI
Ensembl
PMID:17937387 GO_REF:0000107 MGI:3842675 NCBI chrNW_004936476:16,961,734...16,965,487 JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936706:266,462...277,256 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IEA Ensembl
UniProt
GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Gys1 glycogen synthase 1 ISO RGD PMID:6244274 PMID:10572943 RGD:1642811 RGD:2304186 NCBI chrNW_004936664:2,978,546...2,995,145 JBrowse link
G Gys2 glycogen synthase 2 ISO RGD PMID:1733780 PMID:6096366 RGD:2304113 RGD:2304117 NCBI chrNW_004936548:5,256,185...5,309,758 JBrowse link
G Il6st interleukin 6 cytokine family signal transducer acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1335676|PMID:10205167) MGI
Ensembl
PMID:10205167 GO_REF:0000107 MGI:1335676 NCBI chrNW_004936480:11,867,573...11,913,563 JBrowse link
G Lepr leptin receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:6094295|PMID:28973665) MGI
Ensembl
PMID:28973665 GO_REF:0000107 MGI:6094295 NCBI chrNW_004936591:5,771,371...5,846,177 JBrowse link
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5501393|PMID:23663739)
(MGI:5607479|PMID:24914213), (MGI:5616018|PMID:25416783)
MGI
Ensembl
PMID:23663739 PMID:24914213 PMID:25416783 GO_REF:0000107 MGI:5501393 MGI:5607479 MGI:5616018 NCBI chrNW_004936552:3,891,350...3,893,566 JBrowse link
G Pcdh12 protocadherin 12 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3804356|PMID:18477666) MGI
Ensembl
PMID:18477666 GO_REF:0000107 MGI:3804356 NCBI chrNW_004936504:12,226,771...12,244,959 JBrowse link
G Phka1 phosphorylase kinase regulatory subunit alpha 1 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936762:1,657,778...1,766,592 JBrowse link
G Phka2 phosphorylase kinase regulatory subunit alpha 2 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936844:478,773...548,565 JBrowse link
G Phkb phosphorylase kinase regulatory subunit beta involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936475:779,238...1,002,851 JBrowse link
G Phkg1 phosphorylase kinase catalytic subunit gamma 1 involved_in ISO
IEA
RGD
UniProt
PMID:3953807 PMID:6281247 GO_REF:0000043 RGD:2304176 RGD:2305955 NCBI chrNW_004936543:7,870,081...7,876,033 JBrowse link
G Phkg2 phosphorylase kinase catalytic subunit gamma 2 involved_in ISO
IEA
RGD
UniProt
PMID:1370475 PMID:6281247 GO_REF:0000043 RGD:2304176 RGD:727546 NCBI chrNW_004936501:13,139,182...13,150,507 JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936599:2,345,982...2,348,494 JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936493:3,981,364...4,002,083 JBrowse link
G Ppp1cc protein phosphatase 1 catalytic subunit gamma involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936558:3,631,794...3,651,754 JBrowse link
G Ppp1r3b protein phosphatase 1 regulatory subunit 3B involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936573:1,351,207...1,363,639 JBrowse link
G Ppp1r3c protein phosphatase 1 regulatory subunit 3C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:86241|PMID:9045612)
(MGI:5906209|PMID:21552327)
MGI
UniProt
Ensembl
PMID:9045612 PMID:21552327 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 MGI:5906209 MGI:86241 NCBI chrNW_004936601:2,930,250...2,935,024 JBrowse link
G Ppp1r3d protein phosphatase 1 regulatory subunit 3D involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936514:8,350,275...8,353,782 JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:6,907,723...7,168,222 JBrowse link
G Pygb glycogen phosphorylase B involved_in ISO
IEA
RGD
UniProt
PMID:1554349 GO_REF:0000043 RGD:2304136 NCBI chrNW_004936620:533,574...575,893 JBrowse link
G Pygl glycogen phosphorylase L involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3760536|PMID:11960689) RGD
UniProt
Ensembl
MGI
PMID:1554349 PMID:1733780 PMID:2803260 PMID:6096366 PMID:8550381 More... GO_REF:0000043 GO_REF:0000107 MGI:3760536 RGD:1601233 RGD:2304113 RGD:2304115 RGD:2304117 RGD:2304119 RGD:2304136 NCBI chrNW_004936495:14,692,688...14,728,663 JBrowse link
G Pygm glycogen phosphorylase, muscle associated involved_in ISO
IEA
RGD
UniProt
PMID:6244274 PMID:8550381 PMID:10572943 GO_REF:0000043 RGD:1642811 RGD:2304119 RGD:2304186 NCBI chrNW_004936599:4,551,164...4,564,109 JBrowse link
G Slc37a4 solute carrier family 37 member 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2677663|PMID:12925567), (MGI:3695950|PMID:16891306) MGI
Ensembl
PMID:12925567 PMID:16891306 GO_REF:0000107 MGI:2677663 MGI:3695950 NCBI chrNW_004936542:3,980,538...3,987,039 JBrowse link
G Stk40 serine/threonine kinase 40 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486391|PMID:23293024) MGI
Ensembl
PMID:23293024 GO_REF:0000107 MGI:5486391 NCBI chrNW_004936474:18,771,434...18,816,086 JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chrNW_004936486:3,473,877...3,660,565 JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stbd1 starch binding domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936676:300,244...304,206 JBrowse link
malate-aspartate shuttle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a3 solute carrier family 1 member 3 ISO RGD PMID:15242733 RGD:1642939 NCBI chrNW_004936518:5,216,343...5,291,107 JBrowse link
G Slc25a12 solute carrier family 25 member 12 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3708219|PMID:17213189) RGD
Ensembl
MGI
PMID:17213189 PMID:19764902 GO_REF:0000107 MGI:3708219 RGD:13628741 NCBI chrNW_004936509:1,994,082...2,077,731 JBrowse link
G Slc25a13 solute carrier family 25 member 13 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3708219|PMID:17213189) MGI
Ensembl
PMID:17213189 GO_REF:0000107 MGI:3708219 NCBI chrNW_004936585:4,061,297...4,215,912 JBrowse link
mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bid BH3 interacting domain death agonist acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5662300|PMID:26219591) MGI
Ensembl
PMID:26219591 GO_REF:0000107 MGI:5662300 NCBI chrNW_004936807:708,340...750,127 JBrowse link
G Coq7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (MGI:3820177|PMID:18635541) MGI PMID:18635541 MGI:3820177 NCBI chrNW_004936501:5,035,986...5,043,864 JBrowse link
G Dguok deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chrNW_004936556:226,643...263,517 JBrowse link
G LOC101966578 cytochrome c oxidase assembly factor 6 homolog involved_in ISO (PMID:24549041), (PMID:25959673) UniProt PMID:24549041 PMID:25959673 NCBI chrNW_004936484:17,812,157...17,815,837 JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:5662300 NCBI chrNW_004936562:1,622,341...1,644,191 JBrowse link
G Ndufa12 NADH:ubiquinone oxidoreductase subunit A12 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chrNW_004936507:11,254,729...11,256,395 JBrowse link
G Ndufb6 NADH:ubiquinone oxidoreductase subunit B6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:1,231,744...1,243,783 JBrowse link
G Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936903:503,633...514,235 JBrowse link
G Ndufv1 NADH:ubiquinone oxidoreductase core subunit V1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,169,434...2,173,090 JBrowse link
G Ndufv3 NADH:ubiquinone oxidoreductase subunit V3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:1,102,724...1,113,856 JBrowse link
G Snca synuclein alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3607411|PMID:16260631) MGI
Ensembl
PMID:16260631 GO_REF:0000107 MGI:3607411 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,160,265...1,168,956 JBrowse link
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936517:743,036...752,836 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936484:7,016,049...7,031,060 JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:612,255...614,894 JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:1,509,605...1,513,033 JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,416,505...22,417,543 JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936750:1,716,752...1,725,700 JBrowse link
G Atp5mg ATP synthase membrane subunit g involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936542:3,453,287...3,461,125 JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936690:120,572...135,509 JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:354,416...359,415 JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936640:1,916,711...1,924,823 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in ISO (PMID:15850986) UniProt PMID:15850986 NCBI chrNW_004936500:8,444,681...8,454,694 JBrowse link
G ATP6 ATP synthase F0 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr MT:7,947...8,627 JBrowse link
G LOC101961097 ATP synthase subunit epsilon, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,136,669...18,137,026 JBrowse link
G Stoml2 stomatin like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,129,149...3,132,405 JBrowse link
mitochondrial electron transport, cytochrome c to oxygen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg1l AFG1 like ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:4,553,758...4,755,126 JBrowse link
G LOC101956526 cytochrome c oxidase subunit 4 isoform 2, mitochondrial involved_in ISO (PMID:11311561) UniProt PMID:11311561 NCBI chrNW_004936485:18,631,826...18,637,675 JBrowse link
G LOC101958081 cytochrome c oxidase subunit 8B, mitochondrial-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936888:91,432...95,024 JBrowse link
G LOC101958099 cytochrome c oxidase subunit 7A-related protein, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936508:9,279,974...9,287,279 JBrowse link
G LOC101961000 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936469:5,337,331...5,339,716 JBrowse link
G LOC101964414 cytochrome c oxidase subunit 8A, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936599:5,172,260...5,175,214 JBrowse link
G LOC101965209 cytochrome c oxidase subunit 5B, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936744:921,888...923,803 JBrowse link
G LOC101965810 cytochrome c oxidase subunit 7A1, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936922:162,282...163,864 JBrowse link
G LOC101966864 cytochrome c oxidase subunit 7A2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936788:679,717...686,841 JBrowse link
G LOC101970139 cytochrome c oxidase subunit 7A-related protein, mitochondrial-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936837:33,135...33,396 JBrowse link
G LOC101970194 cytochrome c oxidase subunit 6C involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936470:43,269,744...43,280,886 JBrowse link
G LOC101971634 cytochrome c oxidase subunit 4 isoform 1, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936641:2,690,723...2,695,230 JBrowse link
G LOC101971648 cytochrome c oxidase subunit 5A, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936471:33,874,638...33,887,377 JBrowse link
mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor ISO RGD PMID:15341590 RGD:1358393 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Coq9 coenzyme Q9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5468078|PMID:23255162) MGI
Ensembl
PMID:23255162 GO_REF:0000107 MGI:5468078 NCBI chrNW_004936475:9,502,638...9,517,601 JBrowse link
G Dld dihydrolipoamide dehydrogenase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3622835|PMID:15009635) MGI
Ensembl
PMID:15009635 GO_REF:0000107 MGI:3622835 NCBI chrNW_004936479:16,247,230...16,271,597 JBrowse link
G ND1 NADH dehydrogenase subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr MT:2,748...3,703 JBrowse link
G ND2 NADH dehydrogenase subunit 2 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr MT:3,914...4,955 JBrowse link
G ND3 NADH dehydrogenase subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr MT:9,481...9,827 JBrowse link
G ND4 NADH dehydrogenase subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr MT:10,186...11,563 JBrowse link
G ND5 NADH dehydrogenase subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr MT:11,763...13,580 JBrowse link
G ND6 NADH dehydrogenase subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr MT:13,564...14,088 JBrowse link
G Ndufa10 NADH:ubiquinone oxidoreductase subunit A10 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5568152|PMID:24652937) MGI
InterPro
Ensembl
PMID:24652937 GO_REF:0000002 GO_REF:0000107 MGI:5568152 NCBI chrNW_004936745:1,436,257...1,471,785 JBrowse link
G Ndufa8 NADH:ubiquinone oxidoreductase subunit A8 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936487:10,542,484...10,557,199 JBrowse link
G Ndufb6 NADH:ubiquinone oxidoreductase subunit B6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936524:1,231,744...1,243,783 JBrowse link
G Ndufb8 NADH:ubiquinone oxidoreductase subunit B8 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936600:5,122,004...5,126,776 JBrowse link
G Ndufb9 NADH:ubiquinone oxidoreductase subunit B9 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936470:23,118,162...23,123,648 JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936498:6,626,334...6,636,973 JBrowse link
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936631:2,503,353...2,538,957 JBrowse link
G Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936903:503,633...514,235 JBrowse link
G Ndufs3 NADH:ubiquinone oxidoreductase core subunit S3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,667,780...1,674,670 JBrowse link
G Ndufs6 NADH:ubiquinone oxidoreductase subunit S6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936815:144,994...157,788 JBrowse link
G Ndufs7 NADH:ubiquinone oxidoreductase core subunit S7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:715,093...720,035 JBrowse link
G Ndufs8 NADH:ubiquinone oxidoreductase core subunit S8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,081,493...2,085,635 JBrowse link
G Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936670:2,742,553...2,772,697 JBrowse link
mitochondrial electron transport, succinate to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sdhaf2 succinate dehydrogenase complex assembly factor 2 involved_in IEA UniProt
Ensembl
GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936581:1,607,741...1,628,347 JBrowse link
mitochondrial electron transport, ubiquinol to cytochrome c term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101955110 cytochrome b-c1 complex subunit 10 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936588:876,750...880,677 JBrowse link
G LOC101956274 cytochrome b-c1 complex subunit 1, mitochondrial acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3640022|PMID:16782889) MGI
Ensembl
PMID:16782889 GO_REF:0000107 MGI:3640022 NCBI chrNW_004936529:385,942...396,196 JBrowse link
G LOC101965457 ubiquinol-cytochrome-c reductase complex assembly factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:590,503...591,225 JBrowse link
G LOC101968471 cytochrome b-c1 complex subunit 9 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936657:3,686,019...3,688,730 JBrowse link
G LOC101970096 cytochrome b-c1 complex subunit 8 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936647:2,349,152...2,350,570 JBrowse link
G LOC101976290 cytochrome b-c1 complex subunit 7 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936470:46,300,547...46,305,016 JBrowse link
negative regulation of cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flcn folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936741:881,150...901,296 JBrowse link
G Trap1 TNF receptor associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:667,687...704,994 JBrowse link
negative regulation of fermentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cavin3 caveolae associated protein 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5518817|PMID:24069528) MGI
Ensembl
PMID:24069528 GO_REF:0000107 MGI:5518817 NCBI chrNW_004936842:387,320...388,877 JBrowse link
negative regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004936509:1,994,082...2,077,731 JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4867601|PMID:20935145) MGI
Ensembl
PMID:20935145 GO_REF:0000107 MGI:4867601 NCBI chrNW_004936606:4,518,525...4,540,109 JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4867601|PMID:20935145) MGI
Ensembl
PMID:20935145 GO_REF:0000107 MGI:4867601 NCBI chrNW_004936595:919,807...935,367 JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:11289049) BHF-UCL PMID:11289049 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:8349040 RGD:1625425 NCBI chrNW_004936491:13,603,256...13,665,298 JBrowse link
G Grb10 growth factor receptor bound protein 10 involved_in ISO PMID:11223174 BHF-UCL PMID:11223174 RGD:8553640 NCBI chrNW_004936686:1,102,706...1,279,594 JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,641,485...7,662,033 JBrowse link
G Insr insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chrNW_004936588:4,345,306...4,453,380 JBrowse link
G Pask PAS domain containing serine/threonine kinase involved_in ISO (PMID:16275910) UniProt PMID:16275910 NCBI chrNW_004936745:664,062...704,027 JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chrNW_004936515:3,523,799...3,572,467 JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:1,002,137...1,003,357 JBrowse link
negative regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5529421|PMID:23530063) MGI
Ensembl
PMID:23530063 GO_REF:0000107 MGI:5529421 NCBI chrNW_004936747:800,070...864,299 JBrowse link
negative regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
G Apoc3 apolipoprotein C3 ISO RGD PMID:11177239 RGD:1599177 NCBI chrNW_004936542:2,106,927...2,108,412 JBrowse link
G Mlxipl MLX interacting protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,839,105...2,856,997 JBrowse link
G Pde12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:7,894,026...7,897,844 JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO (MGI:5294502|PMID:21724846) UniProt PMID:21724846 MGI:5294502 NCBI chrNW_004936498:1,856,256...1,944,405 JBrowse link
G Ppif peptidylprolyl isomerase F involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:404,574...411,381 JBrowse link
G Rhoa ras homolog family member A involved_in ISO (MGI:5640904|PMID:25398325) CACAO PMID:25398325 MGI:5640904 NCBI chrNW_004936529:1,000,050...1,045,655 JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:8903396 RGD:14995471 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak2 adenylate kinase 2 ISO RGD PMID:18423391 RGD:5147997 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:1,323,247...1,325,520 JBrowse link
G COX1 involved_in IEA UniProt GO_REF:0000041 NCBI chr MT:5,347...6,888 JBrowse link
G CUNH2orf69 chromosome unknown C2orf69 homolog involved_in ISO (PMID:33945503) UniProt PMID:33945503 NCBI chrNW_004936825:936,690...948,102 JBrowse link
G Fxn frataxin acts_upstream_of_or_within ISO (MGI:3708076|PMID:17404227)
(MGI:3611157|PMID:16278235)
MGI PMID:16278235 PMID:17404227 MGI:3611157 MGI:3708076 NCBI chrNW_004936503:5,323,206...5,343,228 JBrowse link
G LOC101954852 cytochrome c oxidase subunit 6A1, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936668:506,242...508,658 JBrowse link
G LOC101956567 cytochrome c oxidase subunit 6A2, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936543:8,381,115...8,402,935 JBrowse link
G LOC101958081 cytochrome c oxidase subunit 8B, mitochondrial-like involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936888:91,432...95,024 JBrowse link
G LOC101961000 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936469:5,337,331...5,339,716 JBrowse link
G LOC101964414 cytochrome c oxidase subunit 8A, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936599:5,172,260...5,175,214 JBrowse link
G LOC101967130 cytochrome c oxidase subunit 7B, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936683:2,781,614...2,787,570 JBrowse link
G LOC101970194 cytochrome c oxidase subunit 6C involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936470:43,269,744...43,280,886 JBrowse link
G LOC101971634 cytochrome c oxidase subunit 4 isoform 1, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936641:2,690,723...2,695,230 JBrowse link
G LOC101971648 cytochrome c oxidase subunit 5A, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936471:33,874,638...33,887,377 JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3640229|PMID:16805809) MGI
Ensembl
PMID:16805809 GO_REF:0000107 MGI:3640229 NCBI chrNW_004936508:4,943,987...5,013,356 JBrowse link
G Nipsnap2 nipsnap homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:7,928,250...7,957,436 JBrowse link
G Tefm transcription elongation factor, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:2,803,195...2,812,939 JBrowse link
plasma membrane ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966578 cytochrome c oxidase assembly factor 6 homolog involved_in ISO (PMID:26160915) UniProt PMID:26160915 NCBI chrNW_004936484:17,812,157...17,815,837 JBrowse link
positive regulation of cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 acts_upstream_of_or_within ISO (MGI:5516376|PMID:24101517) MGI PMID:24101517 MGI:5516376 NCBI chrNW_004936602:93,126...99,695 JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:8,953,809...8,975,261 JBrowse link
G Ifng interferon gamma involved_in ISO (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chrNW_004936545:6,139,130...6,144,543 JBrowse link
G Ifnlr1 interferon lambda receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:9,209,815...9,220,670 JBrowse link
G Il10rb interleukin 10 receptor subunit beta involved_in ISO (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chrNW_004936500:9,033,077...9,057,465 JBrowse link
G Mfn2 mitofusin 2 ISO mitochondrial function RGD PMID:25147362 RGD:13204807 NCBI chrNW_004936474:767,754...795,258 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Opn3 opsin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:8,833,495...8,876,631 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Prelid1 PRELI domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:1,580,849...1,584,445 JBrowse link
positive regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Akt2 AKT serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,652,568...2,694,039 JBrowse link
G C1qtnf2 C1q and TNF related 2 acts_upstream_of_or_within ISO (MGI:3055459|PMID:15231994) MGI PMID:15231994 MGI:3055459 NCBI chrNW_004936515:3,208,042...3,227,970 JBrowse link
G Cd36 CD36 molecule ISO RGD PMID:14640889 RGD:1600636 NCBI chrNW_004936810:791,823...838,303 JBrowse link
G Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:5,542,873...5,555,469 JBrowse link
G Epm2aip1 EPM2A interacting protein 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5543825|PMID:24142699) MGI
Ensembl
PMID:24142699 GO_REF:0000107 MGI:5543825 NCBI chrNW_004936473:26,548,847...26,556,334 JBrowse link
G Esrrb estrogen related receptor beta involved_in ISO PMID:24481529
(MGI:5905261|PMID:24481529)
BHF-UCL PMID:24481529 MGI:5905261 RGD:12910990 NCBI chrNW_004936488:5,350,133...5,452,366 JBrowse link
G Gck glucokinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:19,104,477...19,118,915 JBrowse link
G Igf1 insulin like growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:11,709,623...11,784,028 JBrowse link
G Igf2 insulin like growth factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:972,902...981,232 JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:1,002,137...1,003,357 JBrowse link
G Insr insulin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:4,345,306...4,453,380 JBrowse link
G Irs1 insulin receptor substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:9,064,442...9,125,972 JBrowse link
G Irs2 insulin receptor substrate 2 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004936472:2,772,187...2,796,398 JBrowse link
G Ppp1r3e protein phosphatase 1 regulatory subunit 3E involved_in ISO PMID:15752363 UniProt PMID:15752363 RGD:2306166 NCBI chrNW_004936722:1,062,669...1,066,611 JBrowse link
G Ppp1r3g protein phosphatase 1 regulatory subunit 3G acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5000151|PMID:21471512) MGI
Ensembl
PMID:21471512 GO_REF:0000107 MGI:5000151 NCBI chrNW_004936534:7,379,443...7,382,752 JBrowse link
G Pth parathyroid hormone involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:5,081,569...5,084,030 JBrowse link
G Sorbs1 sorbin and SH3 domain containing 1 involved_in ISO (MGI:3690172|PMID:11001060) BHF-UCL PMID:11001060 MGI:3690172 NCBI chrNW_004936636:3,834,887...4,066,293 JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chrNW_004936515:3,523,799...3,572,467 JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of_or_within ISO (MGI:1339514|PMID:10391216) MGI PMID:10391216 MGI:1339514 NCBI chrNW_004936472:25,236,728...25,246,585 JBrowse link
positive regulation of mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:400,287...407,677 JBrowse link
G Cdk1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:2,300,682...2,313,611 JBrowse link
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:7,860,432...7,864,050 JBrowse link
positive regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Iscu iron-sulfur cluster assembly enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936769:492,024...498,587 JBrowse link
G Park7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:2,422,780...2,436,817 JBrowse link
G Pink1 PTEN induced kinase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5568152|PMID:24652937) MGI
Ensembl
PMID:24652937 GO_REF:0000107 MGI:5568152 NCBI chrNW_004936474:6,574,471...6,589,478 JBrowse link
positive regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gadd45gip1 GADD45G interacting protein 1 acts_upstream_of_or_within ISO (MGI:5648685|PMID:25883318) MGI PMID:25883318 MGI:5648685 NCBI chrNW_004936659:2,008,025...2,010,052 JBrowse link
G Lexm lymphocyte expansion molecule acts_upstream_of_or_within ISO (MGI:5648685|PMID:25883318) MGI PMID:25883318 MGI:5648685 NCBI chrNW_004936522:6,456,423...6,479,654 JBrowse link
G LOC101972576 valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:18414044 RGD:10059611 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Myog myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chrNW_004936567:1,507,042...1,509,814 JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,998,064...11,999,431 JBrowse link
regulation of aerobic respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO RGD PMID:24601882 RGD:39128160 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Arl2 ADP ribosylation factor like GTPase 2 involved_in ISO (PMID:30945270) UniProt PMID:30945270 NCBI chrNW_004936599:4,336,190...4,343,007 JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:18,449,371...18,460,435 JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:857,483...875,527 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Ide insulin degrading enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:2,230,477...2,318,562 JBrowse link
G LOC101972576 valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461 JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,334,487...1,343,867 JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,422,844...1,427,929 JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936769:1,424,526...1,447,547 JBrowse link
regulation of cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cisd1 CDGSH iron sulfur domain 1 acts_upstream_of_or_within ISO (MGI:3703929|PMID:17376863) MGI PMID:17376863 MGI:3703929 NCBI chrNW_004936614:4,706,463...4,723,756 JBrowse link
G Noa1 nitric oxide associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:19,057,360...19,073,031 JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5582991|PMID:24691033) MGI
Ensembl
PMID:24691033 GO_REF:0000107 MGI:5582991 NCBI chrNW_004936566:3,924,013...3,951,052 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:1,989,429...2,032,430 JBrowse link
G Prdm16 PR/SET domain 16 involved_in ISO (MGI:3770355|PMID:17618855), (MGI:4365360|PMID:18483224) UniProt PMID:17618855 PMID:18483224 MGI:3770355 MGI:4365360 NCBI chrNW_004936737:400,819...446,768 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO RGD PMID:12562968 RGD:1580676 NCBI chrNW_004936659:2,750,015...2,765,914 JBrowse link
G Slc25a23 solute carrier family 25 member 23 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5490167|PMID:23344948) MGI
Ensembl
PMID:23344948 GO_REF:0000107 MGI:5490167 NCBI chrNW_004936588:3,792,760...3,804,788 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5829115|PMID:28069950) MGI
Ensembl
PMID:28069950 GO_REF:0000107 MGI:5829115 NCBI chrNW_004936529:264,535...266,451 JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,641,485...7,662,033 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chrNW_004936474:158,376...282,310 JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004936599:2,345,982...2,348,494 JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004936493:3,981,364...4,002,083 JBrowse link
G Ppp1r3b protein phosphatase 1 regulatory subunit 3B ISO RGD PMID:7720853 PMID:11716774 RGD:2304267 RGD:2306167 NCBI chrNW_004936573:1,351,207...1,363,639 JBrowse link
G Ppp1r3c protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chrNW_004936601:2,930,250...2,935,024 JBrowse link
G Ppp1r3d protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chrNW_004936514:8,350,275...8,353,782 JBrowse link
G Ppp1r3e protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chrNW_004936722:1,062,669...1,066,611 JBrowse link
G Ppp1r3f protein phosphatase 1 regulatory subunit 3F acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21668450) MGI
Ensembl
PMID:21668450 GO_REF:0000107 NCBI chrNW_004936721:1,137,998...1,153,243 JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004936599:2,345,982...2,348,494 JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chrNW_004936493:3,981,364...4,002,083 JBrowse link
G Ppp1r3b protein phosphatase 1 regulatory subunit 3B involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:22225877) RGD
InterPro
Ensembl
MGI
PMID:7720853 PMID:11716774 PMID:22225877 GO_REF:0000002 GO_REF:0000107 RGD:2304267 RGD:2306167 NCBI chrNW_004936573:1,351,207...1,363,639 JBrowse link
G Ppp1r3c protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chrNW_004936601:2,930,250...2,935,024 JBrowse link
G Ppp1r3d protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chrNW_004936514:8,350,275...8,353,782 JBrowse link
G Ppp1r3e protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chrNW_004936722:1,062,669...1,066,611 JBrowse link
regulation of glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcgr glucagon receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,347,789...5,351,852 JBrowse link
G Khk ketohexokinase acts_upstream_of_or_within ISO (MGI:5315051|PMID:22371574) MGI PMID:22371574 MGI:5315051 NCBI chrNW_004936493:5,444,284...5,455,100 JBrowse link
G Pomc proopiomelanocortin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5302462|PMID:21184805) MGI
Ensembl
PMID:21184805 GO_REF:0000107 MGI:5302462 NCBI chrNW_004936493:7,060,747...7,065,276 JBrowse link
G Rubcnl rubicon like autophagy enhancer involved_in ISO (MGI:6282647|PMID:30704899) UniProt PMID:30704899 MGI:6282647 NCBI chrNW_004936857:839,418...870,961 JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936643:2,339,073...2,354,780 JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,895,771...2,897,761 JBrowse link
regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:615,133...634,618 JBrowse link
G Ak4 adenylate kinase 4 involved_in ISO (PMID:26980435) UniProt PMID:26980435 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (MGI:78039|PMID:8550574) MGI PMID:8550574 MGI:78039 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G LOC101958099 cytochrome c oxidase subunit 7A-related protein, mitochondrial involved_in ISO (MGI:5607399|PMID:23857330) UniProt PMID:23857330 MGI:5607399 NCBI chrNW_004936508:9,279,974...9,287,279 JBrowse link
G LOC101975274 ubiquinol-cytochrome-c reductase complex assembly factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:25,241,426...25,254,057 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Pink1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,574,471...6,589,478 JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,422,844...1,427,929 JBrowse link
G Slc25a23 solute carrier family 25 member 23 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5490167|PMID:23344948) MGI
Ensembl
PMID:23344948 GO_REF:0000107 MGI:5490167 NCBI chrNW_004936588:3,792,760...3,804,788 JBrowse link
G Slc25a33 solute carrier family 25 member 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:3,585,372...3,603,515 JBrowse link
respiratory electron transport chain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm2 apoptosis inducing factor mitochondria associated 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936521:8,466,089...8,474,198 JBrowse link
G Coq7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (MGI:2154595|PMID:11585841), (MGI:4359329|PMID:19478076) MGI PMID:11585841 PMID:19478076 MGI:2154595 MGI:4359329 NCBI chrNW_004936501:5,035,986...5,043,864 JBrowse link
G COX3 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:8,627...9,410 JBrowse link
G CYTB cytochrome b involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:14,162...15,301 JBrowse link
G Etfa electron transfer flavoprotein subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:35,868,851...35,942,662 JBrowse link
G Etfb electron transfer flavoprotein subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004937378:26,164...31,470 JBrowse link
G Etfdh electron transfer flavoprotein dehydrogenase involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936576:5,140,577...5,165,527 JBrowse link
G Etfrf1 electron transfer flavoprotein regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936548:2,114,271...2,123,187 JBrowse link
G Gba glucosylceramidase beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5501380|PMID:23707074) MGI
Ensembl
PMID:23707074 GO_REF:0000107 MGI:5501380 NCBI chrNW_004936580:4,715,869...4,720,752 JBrowse link
G LOC101957084 plectin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,194,124...8,252,139 JBrowse link
G LOC101958033 uncharacterized LOC101958033 acts_upstream_of_or_within ISO (MGI:5299279|PMID:21824519) MGI PMID:21824519 MGI:5299279 NCBI chrNW_004936653:3,268,229...3,543,173 JBrowse link
G LOC101959727 cytochrome b-c1 complex subunit Rieske, mitochondrial involved_in ISO (PMID:31883641) UniProt PMID:31883641 NCBI chrNW_004936570:6,044,969...6,051,046 JBrowse link
G LOC101962609 protein SCO2 homolog, mitochondrial acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4412318|PMID:19837698) MGI
Ensembl
PMID:19837698 GO_REF:0000107 MGI:4412318 NCBI chrNW_004936629:318,581...320,804 JBrowse link
G Mybbp1a MYB binding protein 1a acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3032469|PMID:14744933) MGI
Ensembl
PMID:14744933 GO_REF:0000107 MGI:3032469 NCBI chrNW_004936677:1,095,022...1,108,545 JBrowse link
G Ndufa5 NADH:ubiquinone oxidoreductase subunit A5 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5548237|PMID:24154540) MGI
InterPro
Ensembl
PMID:24154540 GO_REF:0000002 GO_REF:0000107 MGI:5548237 NCBI chrNW_004936605:1,915,246...1,928,853 JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO (MGI:6277626|PMID:30391276) MGI PMID:30391276 MGI:6277626 NCBI chrNW_004936480:13,829,093...13,932,202 JBrowse link
G Ndufs6 NADH:ubiquinone oxidoreductase subunit S6 acts_upstream_of_or_within ISO (MGI:5319010|PMID:22474353) MGI PMID:22474353 MGI:5319010 NCBI chrNW_004936815:144,994...157,788 JBrowse link
G Pink1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,574,471...6,589,478 JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5465384|PMID:23197651) MGI
Ensembl
PMID:23197651 GO_REF:0000107 MGI:5465384 NCBI chrNW_004936541:4,988,469...5,004,110 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha acts_upstream_of_or_within
involved_in
ISO
ISS
IEA
(MGI:3032469|PMID:14744933) MGI
UniProt
Ensembl
PMID:14744933 GO_REF:0000024 GO_REF:0000107 MGI:3032469 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Pum2 pumilio RNA binding family member 2 involved_in ISO (MGI:6304097|PMID:30735131) MGI PMID:30735131 MGI:6304097 NCBI chrNW_004936493:11,067,318...11,154,133 JBrowse link
G Sdha succinate dehydrogenase complex flavoprotein subunit A involved_in ISO (PMID:7550341) RGD
UniProt
PMID:7550341 PMID:16520240 RGD:2306906 NCBI chrNW_004936815:1,148,963...1,167,585 JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B ISO RGD PMID:16520240 RGD:2306906 NCBI chrNW_004936474:3,993,224...4,021,359 JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1931647|PMID:11226230), (MGI:4359329|PMID:19478076) MGI
Ensembl
PMID:11226230 PMID:19478076 GO_REF:0000107 MGI:1931647 MGI:4359329 NCBI chrNW_004936489:11,178,338...11,191,601 JBrowse link
tricarboxylic acid cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aco2 aconitase 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:9630632) RGD
UniProt
Ensembl
InterPro
MGI
PMID:9630632 PMID:9712727 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 RGD:2306877 NCBI chrNW_004936492:407,482...452,538 JBrowse link
G Cs citrate synthase involved_in ISO
IEA
RGD
UniProt
PMID:938457 PMID:9712727 GO_REF:0000041 RGD:2306828 RGD:2306877 NCBI chrNW_004936646:676,926...704,988 JBrowse link
G Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936484:3,207,650...3,251,661 JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in IEA Ensembl
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936488:4,038,985...4,061,071 JBrowse link
G Fh fumarate hydratase involved_in ISO
IEA
RGD
InterPro
UniProt
PMID:938457 GO_REF:0000002 GO_REF:0000041 RGD:2306828 NCBI chrNW_004936526:8,936,096...8,965,155 JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936950:334,894...349,221 JBrowse link
G Idh2 isocitrate dehydrogenase (NADP(+)) 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936483:15,845,777...15,864,341 JBrowse link
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in ISO
IEA
RGD
Ensembl
UniProt
InterPro
PMID:938457 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 RGD:2306828 NCBI chrNW_004936471:36,823,003...36,842,576 JBrowse link
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta involved_in ISO
IEA
RGD
Ensembl
UniProt
InterPro
PMID:938457 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 RGD:2306828 NCBI chrNW_004936485:16,033,287...16,038,097 JBrowse link
G Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma involved_in ISO
IEA
RGD
UniProt
Ensembl
InterPro
PMID:938457 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 RGD:2306828 NCBI chrNW_004936809:666,231...675,279 JBrowse link
G LOC101964695 isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004936654:2,129,260...2,131,869 JBrowse link
G Mdh1 malate dehydrogenase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936491:8,570,472...8,586,914 JBrowse link
G Mdh2 malate dehydrogenase 2 involved_in ISO
IEA
RGD
InterPro
UniProt
PMID:938457 GO_REF:0000002 GO_REF:0000043 RGD:2306828 NCBI chrNW_004936543:2,194,074...2,208,626 JBrowse link
G Mrps36 mitochondrial ribosomal protein S36 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:345,332...353,828 JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO
IEA
RGD
InterPro
PMID:9712727 GO_REF:0000002 RGD:2306877 NCBI chrNW_004936478:19,506,845...19,584,411 JBrowse link
G Ogdhl oxoglutarate dehydrogenase L involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936728:573,079...599,155 JBrowse link
G Sdha succinate dehydrogenase complex flavoprotein subunit A involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936815:1,148,963...1,167,585 JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chrNW_004936474:3,993,224...4,021,359 JBrowse link
G Sdhc succinate dehydrogenase complex subunit C involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936903:592,641...636,845 JBrowse link
G Sdhd succinate dehydrogenase complex subunit D involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936612:2,357,336...2,369,204 JBrowse link
G Sucla2 succinate-CoA ligase ADP-forming subunit beta involved_in ISO
IEA
RGD
UniProt
InterPro
PMID:17403370 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 RGD:2306915 NCBI chrNW_004936565:1,313,150...1,355,693 JBrowse link
G Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha involved_in ISO
IEA
RGD
UniProt
PMID:17403370 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 RGD:2306915 NCBI chrNW_004936650:3,278,769...3,313,537 JBrowse link
G Suclg2 succinate-CoA ligase GDP-forming subunit beta involved_in ISO
IEA
RGD
UniProt
InterPro
PMID:17403370 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 RGD:2306915 NCBI chrNW_004936603:243,113...378,526 JBrowse link

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  biological_process 14953
    cellular process 14088
      cellular metabolic process 8560
        generation of precursor metabolites and energy 408
          energy derivation by oxidation of organic compounds 288
            cellular respiration + 203
            energy reserve metabolic process + 82
            fermentation + 6
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