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ONTOLOGY REPORT - ANNOTATIONS


Term:sterol transport
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Accession:GO:0015918 term browser browse the term
Definition:The directed movement of sterols into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Sterols are steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule.


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sterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP binding cassette subfamily A member 5 NAS RGD PMID:16162093 RGD:1549860 NCBI chr10:98,573,226...98,645,028
Ensembl chr10:98,576,039...98,644,938
JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3818784|PMID:18039927)
UniProt
RGD
PMID:18039927 GO_REF:0000024 MGI:3818784 NCBI chr 8:48,604,915...48,626,219
Ensembl chr 8:48,606,403...48,619,592
JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:3695229|PMID:16867993)
UniProt
RGD
PMID:16867993 GO_REF:0000024 MGI:3695229 NCBI chr 6:7,935,771...7,961,207
Ensembl chr 6:7,935,771...7,961,207
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:3514037 (MGI:3514013|PMID:15040800)
(MGI:3695229|PMID:16867993)
UniProt
RGD
PMID:15040800 PMID:16867993 GO_REF:0000024 MGI:3514013 MGI:3695229 NCBI chr 6:7,961,413...7,980,708
Ensembl chr 6:7,961,413...7,980,708
JBrowse link
G Gramd1a GRAM domain containing 1A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:89,563,982...89,590,406
Ensembl chr 1:89,563,976...89,590,490
JBrowse link
G Gramd1b GRAM domain containing 1B involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:44,160,634...44,399,110
Ensembl chr 8:44,165,367...44,327,551
JBrowse link
G Gramd1c GRAM domain containing 1C involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:61,609,370...61,659,355
NCBI chr11:62,580,983...62,634,961
Ensembl chr11:61,605,937...62,634,803
JBrowse link
G Mttp microsomal triglyceride transfer protein involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:243,366,181...243,407,608
Ensembl chr 2:243,366,181...243,407,608
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:108,467,410...108,488,330
Ensembl chr 6:108,467,410...108,488,330
JBrowse link
G Osbp oxysterol binding protein involved_in ISO (PMID:24209621) RGD PMID:24209621 NCBI chr 1:228,395,237...228,425,366
Ensembl chr 1:228,395,558...228,425,361
JBrowse link
G Osbp2 oxysterol binding protein 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr14:83,943,976...84,107,031
Ensembl chr14:83,943,977...84,106,997
JBrowse link
G Osbpl10 oxysterol binding protein-like 10 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:123,029,722...123,303,553
Ensembl chr 8:123,126,667...123,293,562
JBrowse link
G Osbpl11 oxysterol binding protein-like 11 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:70,770,509...70,855,425
Ensembl chr11:70,770,507...70,833,577
JBrowse link
G Osbpl1a oxysterol binding protein-like 1A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:4,097,011...4,294,136
Ensembl chr18:4,097,012...4,294,136
JBrowse link
G Osbpl3 oxysterol binding protein-like 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:80,025,453...80,202,532
Ensembl chr 4:80,025,440...80,107,884
JBrowse link
G Osbpl5 oxysterol binding protein-like 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:216,866,263...216,920,625
Ensembl chr 1:216,866,245...216,920,625
JBrowse link
G Osbpl6 oxysterol binding protein-like 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:63,257,646...63,455,105
Ensembl chr 3:63,353,178...63,454,967
JBrowse link
G Osbpl7 oxysterol binding protein-like 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:84,986,330...85,003,947
Ensembl chr10:84,986,328...85,004,562
JBrowse link
G Osbpl8 oxysterol binding protein-like 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:53,878,906...54,030,110
Ensembl chr 7:53,878,610...54,027,892
JBrowse link
G Osbpl9 oxysterol binding protein-like 9 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:128,694,407...128,839,435
Ensembl chr 5:128,694,803...128,839,433
JBrowse link
G Pltp phospholipid transfer protein involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:161,304,469...161,322,289
Ensembl chr 3:161,304,469...161,322,289
JBrowse link
G Scp2 sterol carrier protein 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:127,647,934...127,735,703
Ensembl chr 5:127,620,274...127,735,739
JBrowse link
cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 acts_upstream_of_or_within
involved_in
ISO MGI:1935192|MGI:3613250 (MGI:2675932|PMID:12869555), (MGI:3056863|PMID:15269218), (MGI:3513719|PMID:15520449), (MGI:3706212|PMID:17148552)
UniProtKB:P02647|UniProtKB:P02649 (PMID:10431236), (PMID:11162594), (PMID:16443932), (PMID:16702602), (PMID:19556522), (PMID:23931754), (PMID:25084135), (PMID:28373057)
(MGI:5427333|PMID:22179027)
RGD PMID:10431236 PMID:11162594 PMID:12869555 PMID:15269218 PMID:15520449 PMID:16443932 PMID:16702602 PMID:17148552 PMID:19556522 PMID:22179027 PMID:23931754 PMID:25084135 PMID:28373057 MGI:2675932 MGI:3056863 MGI:3513719 MGI:3706212 MGI:5427333 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:4454250|PMID:20382126)
Ensembl
RGD
PMID:20382126 GO_REF:0000107 MGI:4454250 NCBI chr10:98,573,226...98,645,028
Ensembl chr10:98,576,039...98,644,938
JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISO
IEA
IBA
ISS
(PMID:14570867)
(MGI:6271506|PMID:27472885)
GO_REF:0000107
PMID:21873635
GO_REF:0000024
RGD
Ensembl
Alzheimers_University_of_Toronto
UniProt
PMID:14570867 PMID:27472885, PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:6271506, RGD:13792537 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:29300488) RGD PMID:29300488 NCBI chr10:98,236,919...98,308,288
Ensembl chr10:98,237,141...98,294,522
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO
IBA
(PMID:15994327), (PMID:16702602), (PMID:24576892)
PMID:21873635
(MGI:3852307|PMID:16556852), (MGI:5634884|PMID:21481393)
RGD PMID:15994327 PMID:16556852 PMID:16702602 PMID:21481393 PMID:24576892, PMID:21873635 MGI:3852307 MGI:5634884, RGD:13792537 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Abcg4 ATP binding cassette subfamily G member 4 NOT|involved_in ISO
IBA
ISS
(MGI:3852307|PMID:16556852)
PMID:21873635
(MGI:3047008|PMID:15210959), (MGI:3818784|PMID:18039927)
(PMID:33141061)
GO_REF:0000024
RGD
UniProt
PMID:15210959 PMID:16556852 PMID:18039927 PMID:33141061, PMID:21873635 GO_REF:0000024 MGI:3047008 MGI:3818784 MGI:3852307, RGD:13792537 NCBI chr 8:48,604,915...48,626,219
Ensembl chr 8:48,606,403...48,619,592
JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 involved_in ISO
ISS
UniProtKB:Q99PE8 (PMID:14504269), (PMID:27144356)
(MGI:2681374|PMID:14504269)
GO_REF:0000024
RGD
UniProt
PMID:14504269 PMID:27144356 GO_REF:0000024 MGI:2681374 NCBI chr 6:7,935,771...7,961,207
Ensembl chr 6:7,935,771...7,961,207
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 involved_in ISO UniProtKB:Q9DBM0|UniProtKB:Q9H222 (PMID:14504269), (PMID:27144356)
(MGI:2681374|PMID:14504269)
RGD PMID:14504269 PMID:27144356 MGI:2681374 NCBI chr 6:7,961,413...7,980,708
Ensembl chr 6:7,961,413...7,980,708
JBrowse link
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2180783 (MGI:1096304|PMID:9275209), (MGI:2176648|PMID:11744719), (MGI:2675932|PMID:12869555), (MGI:3056863|PMID:15269218), (MGI:892202|PMID:9186920)
(PMID:11162594), (PMID:12202492), (PMID:14703508), (PMID:15358760), (PMID:16443932), (PMID:21481393)
RGD PMID:9186920 PMID:9275209 PMID:11162594 PMID:11744719 PMID:12202492 PMID:12869555 PMID:14703508 PMID:15269218 PMID:15358760 PMID:16443932 PMID:21481393, PMID:21873635 MGI:1096304 MGI:2176648 MGI:2675932 MGI:3056863 MGI:892202, RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:11162594) RGD PMID:11162594 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoa4 apolipoprotein A4 involved_in ISO
IEA
IBA
(PMID:11162594), (PMID:1935934)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:1935934 PMID:11162594, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apoa5 apolipoprotein A5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
G Apob apolipoprotein B acts_upstream_of_or_within ISO MGI:104539 (MGI:5428098|PMID:22363685) RGD PMID:22363685 MGI:5428098 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:11162594) RGD PMID:11162594 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO (PMID:11162594) RGD PMID:11162594 NCBI chr 1:80,589,023...80,593,991
Ensembl chr 1:80,589,023...80,594,136
JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO
IEA
(PMID:11162594), (PMID:16443932)
GO_REF:0000107
RGD
Ensembl
PMID:11162594 PMID:16443932 GO_REF:0000107 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:2137814 (MGI:2151732|PMID:11551841), (MGI:3056863|PMID:15269218)
(PMID:11162594), (PMID:16443932), (PMID:23620513)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:11162594 PMID:11551841 PMID:15269218 PMID:16443932 PMID:23620513 GO_REF:0000024 GO_REF:0000107 MGI:2151732 MGI:3056863 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Apof apolipoprotein F acts_upstream_of_or_within ISO MGI:88052 (MGI:5428098|PMID:22363685) RGD PMID:22363685 MGI:5428098 NCBI chr 7:2,689,501...2,690,938
Ensembl chr 7:2,689,501...2,690,936
JBrowse link
G Apom apolipoprotein M involved_in ISO
IBA
(PMID:15793583), (PMID:16682745)
(MGI:3575626|PMID:15793583)
PMID:21873635
RGD PMID:15793583 PMID:16682745, PMID:21873635 MGI:3575626, RGD:13792537 NCBI chr20:5,120,473...5,123,073
Ensembl chr20:5,120,474...5,123,073
JBrowse link
G Cav1 caveolin 1 IMP RGD PMID:17499231 RGD:2289119 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in
acts_upstream_of_or_within
ISO (PMID:16141411)
MGI:1857409 (MGI:3706212|PMID:17148552)
RGD PMID:16141411 PMID:17148552 MGI:3706212 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in ISO
IBA
(PMID:16141411)
(MGI:5465528|PMID:21315718)
PMID:21873635
RGD PMID:16141411 PMID:21315718, PMID:21873635 MGI:5465528, RGD:13792537 NCBI chr 6:108,467,410...108,488,330
Ensembl chr 6:108,467,410...108,488,330
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO
IBA
(PMID:12202492)
(MGI:3843437|PMID:14718538), (MGI:5634884|PMID:21481393)
PMID:21873635
RGD PMID:12202492 PMID:14718538 PMID:21481393, PMID:21873635 MGI:3843437 MGI:5634884, RGD:13792537 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Soat1 sterol O-acyltransferase 1 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:15308631)
Ensembl
RGD
PMID:15308631, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:74,035,258...74,077,759
Ensembl chr13:74,035,080...74,077,783
JBrowse link
G Soat2 sterol O-acyltransferase 2 involved_in ISO
IEA
IBA
(PMID:15308631)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:15308631, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 7:143,754,892...143,767,989
Ensembl chr 7:143,754,892...143,767,989
JBrowse link
G Stx12 syntaxin 12 involved_in ISO
IEA
(PMID:15469992)
GO_REF:0000107
RGD
Ensembl
PMID:15469992 GO_REF:0000107 NCBI chr 5:151,044,050...151,072,893
Ensembl chr 5:151,044,329...151,072,904
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6407480|PMID:31391339)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:31391339 GO_REF:0000024 GO_REF:0000107 MGI:6407480 NCBI chr 1:163,317,281...163,328,697
Ensembl chr 1:163,317,282...163,328,591
JBrowse link
cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in ISO (PMID:14718538) RGD PMID:14718538 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Cd36 CD36 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:3718873|PMID:17507371)
UniProt
RGD
PMID:17507371 GO_REF:0000024 MGI:3718873 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Ldlr low density lipoprotein receptor involved_in IEA
ISO
GO_REF:0000107
(MGI:3784112|PMID:18175806)
(PMID:6299582)
Ensembl
RGD
PMID:6299582 PMID:18175806 GO_REF:0000107 MGI:3784112 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in IBA
ISO
PMID:21873635
(MGI:3784112|PMID:18175806), (MGI:3843437|PMID:14718538), (MGI:5634884|PMID:21481393)
(PMID:11208913), (PMID:26965621)
RGD PMID:11208913 PMID:14718538 PMID:18175806 PMID:21481393 PMID:26965621, PMID:21873635 MGI:3784112 MGI:3843437 MGI:5634884, RGD:13792537 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 involved_in IBA
ISO
PMID:21873635
(PMID:18403318)
RGD PMID:18403318, PMID:21873635 RGD:13792537 NCBI chr18:25,982,210...25,997,555
Ensembl chr18:25,984,638...25,997,555
JBrowse link
G Stard5 StAR-related lipid transfer domain containing 5 involved_in ISO (PMID:18403318) RGD PMID:18403318 NCBI chr 1:145,770,135...145,780,001
Ensembl chr 1:145,770,135...145,780,001
JBrowse link
cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 IDA
IMP
RGD PMID:12909583, PMID:14993246 RGD:1304419, RGD:1358264 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:29300488) RGD PMID:29300488 NCBI chr10:98,236,919...98,308,288
Ensembl chr10:98,237,141...98,294,522
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 acts_upstream_of_or_within TAS
ISO
(MGI:3512871|PMID:15319426) RGD PMID:15319426, PMID:11590207 MGI:3512871, RGD:634620 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Apoa1 apolipoprotein A1 acts_upstream_of_or_within IDA
ISO
(PMID:10559507)
MGI:1857127|MGI:2180783 (MGI:1096057|PMID:9300780), (MGI:1196678|PMID:9507992), (MGI:3706653|PMID:9684752)
RGD PMID:9300780 PMID:9507992 PMID:9684752 PMID:10559507, PMID:11773045, PMID:1537840 MGI:1096057 MGI:1196678 MGI:3706653, RGD:1298673, RGD:1626399 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:1537840, PMID:21873635 RGD:1626399, RGD:13792537 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:2563166)
MGI:2157090 (MGI:77225|PMID:7593600)
PMID:21873635
RGD PMID:2563166 PMID:7593600, PMID:21873635 MGI:77225, RGD:13792537 NCBI chr 6:33,176,826...33,216,381
Ensembl chr 6:33,176,778...33,224,997
JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr19:57,484,720...57,496,539
Ensembl chr19:57,484,634...57,496,695
JBrowse link
G Cd36 CD36 molecule involved_in ISO (MGI:2447499|PMID:12376530) RGD PMID:12376530 MGI:2447499 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Cftr CF transmembrane conductance regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856709 (MGI:3709533|PMID:17085523)
Ensembl
RGD
PMID:17085523 GO_REF:0000107 MGI:3709533 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 NOT|acts_upstream_of_or_within ISO (MGI:2451215|PMID:12496272) RGD PMID:12496272 MGI:2451215 NCBI chr 7:116,632,496...116,635,543
Ensembl chr 7:116,632,506...116,634,293
JBrowse link
G Lcat lecithin cholesterol acyltransferase acts_upstream_of_or_within ISO (PMID:10559507) RGD PMID:10559507 NCBI chr19:37,913,333...37,916,799
Ensembl chr19:37,913,336...37,916,813
JBrowse link
G Ldlr low density lipoprotein receptor involved_in
acts_upstream_of_or_within
ISO (PMID:17142622)
MGI:1857212 (MGI:3706212|PMID:17148552)
RGD PMID:17142622 PMID:17148552 MGI:3706212 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Lipc lipase C, hepatic type involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857182 (MGI:82594|PMID:8798380)
Ensembl
RGD
PMID:8798380 GO_REF:0000107 MGI:82594 NCBI chr 8:77,272,582...77,398,485
Ensembl chr 8:77,272,570...77,398,248
JBrowse link
G Msr1 macrophage scavenger receptor 1 involved_in ISO (MGI:2447499|PMID:12376530) RGD PMID:12376530 MGI:2447499 NCBI chr16:56,817,714...56,900,025
Ensembl chr16:56,813,791...56,900,052
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:18772377) RGD PMID:18772377 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:86,345,946...86,560,694
Ensembl chr14:86,345,953...86,560,694
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in ISO (PMID:17018531), (PMID:18772377)
(MGI:5465528|PMID:21315718)
RGD PMID:17018531 PMID:18772377 PMID:21315718 MGI:5465528 NCBI chr 6:108,467,410...108,488,330
Ensembl chr 6:108,467,410...108,488,330
JBrowse link
G Osbpl2 oxysterol binding protein-like 2 involved_in ISO (PMID:30581148) RGD PMID:30581148 NCBI chr 3:175,493,650...175,538,965
Ensembl chr 3:175,493,698...175,538,963
JBrowse link
G Pdzk1 PDZ domain containing 1 NAS RGD PMID:10829064 RGD:70627 NCBI chr 2:198,965,685...198,999,323
Ensembl chr 2:198,965,685...198,999,323
JBrowse link
G Scarb1 scavenger receptor class B, member 1 acts_upstream_of_or_within ISO MGI:1928989 (MGI:3037533|PMID:14729860), (MGI:3690692|PMID:10559220), (MGI:82596|PMID:8753864) RGD PMID:8753864 PMID:10559220 PMID:14729860 MGI:3037533 MGI:3690692 MGI:82596 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Stard3 StAR-related lipid transfer domain containing 3 involved_in ISO (PMID:28377464) RGD PMID:28377464 NCBI chr10:86,313,430...86,335,868
Ensembl chr10:86,313,383...86,335,923
JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B acts_upstream_of_or_within ISO (MGI:1353213|PMID:10637304) RGD PMID:10637304 MGI:1353213 NCBI chr13:26,825,261...26,850,460
Ensembl chr13:26,825,261...26,850,460
JBrowse link
cholesterol transport involved in cholesterol storage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stard4 StAR-related lipid transfer domain containing 4 involved_in ISO
IBA
(PMID:18403318)
PMID:21873635
RGD PMID:18403318, PMID:21873635 RGD:13792537 NCBI chr18:25,982,210...25,997,555
Ensembl chr18:25,984,638...25,997,555
JBrowse link
endosome to lysosome transport of low-density lipoprotein particle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP-ribosylation factor like GTPase 8B involved_in ISS
ISO
GO_REF:0000024
(PMID:21802320)
UniProt
RGD
PMID:21802320 GO_REF:0000024 NCBI chr 4:140,837,745...140,881,866
Ensembl chr 4:140,837,745...140,881,865
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO
IEA
(MGI:5691857|PMID:25144390)
GO_REF:0000107
RGD
Ensembl
PMID:25144390 GO_REF:0000107 MGI:5691857 NCBI chr 1:218,419,182...218,448,902
Ensembl chr 1:218,419,184...218,448,877
JBrowse link
intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:3718873|PMID:17507371)
UniProt
RGD
PMID:17507371 GO_REF:0000024 MGI:3718873 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO
IEA
(PMID:17142622)
GO_REF:0000107
RGD
Ensembl
PMID:17142622 GO_REF:0000107 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Lima1 LIM domain and actin binding 1 involved_in ISO (MGI:6160379|PMID:29880681) RGD PMID:29880681 MGI:6160379 NCBI chr 7:141,428,113...141,528,447
Ensembl chr 7:141,428,063...141,528,397
JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) RGD PMID:17140581 NCBI chr14:86,345,946...86,560,694
Ensembl chr14:86,345,953...86,560,694
JBrowse link
G Pnlip pancreatic lipase involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2681122 (MGI:2679793|PMID:12915407)
Ensembl
RGD
PMID:12915407 GO_REF:0000107 MGI:2679793 NCBI chr 1:279,798,187...279,811,372
Ensembl chr 1:279,798,187...279,811,372
JBrowse link
intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (PMID:10431236) RGD PMID:10431236 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:15994327) RGD PMID:15994327 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 involved_in ISO (PMID:27238017), (PMID:28784760), (PMID:9211849) RGD PMID:9211849 PMID:27238017 PMID:28784760 NCBI chr18:3,616,878...3,662,656
Ensembl chr18:3,616,878...3,662,683
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
UniProtKB:Q96E22 (PMID:19723497)
(PMID:15937921), (PMID:17018531), (PMID:18823126), (PMID:27238017)
(MGI:3763329|PMID:17018531)
RGD PMID:15937921 PMID:17018531 PMID:18823126 PMID:19723497 PMID:27238017, PMID:21873635 MGI:3763329, RGD:13792537 NCBI chr 6:108,467,410...108,488,330
Ensembl chr 6:108,467,410...108,488,330
JBrowse link
G Osbp oxysterol binding protein involved_in ISO (PMID:29514919) RGD PMID:29514919 NCBI chr 1:228,395,237...228,425,366
Ensembl chr 1:228,395,558...228,425,361
JBrowse link
G Osbpl2 oxysterol binding protein-like 2 involved_in ISO
IEA
(PMID:30581148)
GO_REF:0000107
RGD
Ensembl
PMID:30581148 GO_REF:0000107 NCBI chr 3:175,493,650...175,538,965
Ensembl chr 3:175,493,698...175,538,963
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:70,192,975...70,215,719
Ensembl chr 8:70,192,975...70,215,719
JBrowse link
G Relch RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing involved_in ISO (PMID:29514919) RGD PMID:29514919 NCBI chr13:25,656,983...25,752,792
Ensembl chr13:25,656,983...25,752,792
JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO
ISS
(PMID:7642518)
GO_REF:0000024
RGD
UniProt
PMID:7642518 GO_REF:0000024 NCBI chr 5:127,647,934...127,735,703
Ensembl chr 5:127,620,274...127,735,739
JBrowse link
G Serac1 serine active site containing 1 involved_in ISO (PMID:22683713) RGD PMID:22683713 NCBI chr 1:46,934,499...46,978,264
Ensembl chr 1:46,942,192...46,978,261
JBrowse link
G Star steroidogenic acute regulatory protein involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:14617579, PMID:21873635 RGD:4145640, RGD:13792537 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
G Stard4 StAR-related lipid transfer domain containing 4 involved_in IBA
ISO
PMID:21873635
(PMID:18403318)
RGD PMID:18403318, PMID:21873635 RGD:13792537 NCBI chr18:25,982,210...25,997,555
Ensembl chr18:25,984,638...25,997,555
JBrowse link
G Tspo2 translocator protein 2 involved_in ISO (PMID:32358067)
(MGI:6450299|PMID:32358067)
RGD PMID:32358067 MGI:6450299 NCBI chr 9:14,510,378...14,514,609
Ensembl chr 9:14,513,037...14,514,416
JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in ISO (PMID:10637304) RGD PMID:10637304 NCBI chr19:39,230,050...39,243,298
Ensembl chr19:39,229,754...39,243,496
JBrowse link
intracellular sterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arv1 ARV1 homolog, fatty acid homeostasis modulator involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:57,484,720...57,496,539
Ensembl chr19:57,484,634...57,496,695
JBrowse link
G Npc2 NPC intracellular cholesterol transporter 2 involved_in ISO (PMID:17018531) RGD PMID:17018531 NCBI chr 6:108,467,410...108,488,330
Ensembl chr 6:108,467,410...108,488,330
JBrowse link
negative regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in
ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:12042316) RGD PMID:12042316 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Egf epidermal growth factor involved_in ISO (MGI:4460848|PMID:20037141) RGD PMID:20037141 MGI:4460848 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in ISO (MGI:4411947|PMID:19752193) RGD PMID:19752193 MGI:4411947 NCBI chr  X:156,716,469...156,726,367
Ensembl chr  X:156,716,604...156,725,977
JBrowse link
G Pla2g10 phospholipase A2, group X involved_in IEA
ISO
GO_REF:0000107
(MGI:5051938|PMID:20844270)
Ensembl
RGD
PMID:20844270 GO_REF:0000107 MGI:5051938 NCBI chr10:1,509,732...1,520,970
Ensembl chr10:1,509,732...1,520,970
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
GO_REF:0000107
(MGI:5306540|PMID:21931618)
Ensembl
RGD
PMID:21931618 GO_REF:0000107 MGI:5306540 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:15358760)
Ensembl
RGD
PMID:15358760 GO_REF:0000107 NCBI chr 7:123,381,082...123,438,605
Ensembl chr 7:123,381,077...123,438,603
JBrowse link
negative regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:10764676) RGD PMID:10764676 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoc3 apolipoprotein C3 involved_in ISO
IEA
(PMID:15778093)
GO_REF:0000107
RGD
Ensembl
PMID:15778093 GO_REF:0000107 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
negative regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:8636092) RGD PMID:8636092 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoc1 apolipoprotein C1 involved_in IBA
ISO
PMID:21873635
(PMID:10978346)
RGD PMID:10978346, PMID:21873635 RGD:13792537 NCBI chr 1:80,606,638...80,609,921
Ensembl chr 1:80,606,638...80,609,921
JBrowse link
G Apoc2 apolipoprotein C2 involved_in ISO (PMID:15778093) RGD PMID:15778093 NCBI chr 1:80,589,023...80,593,991
Ensembl chr 1:80,589,023...80,594,136
JBrowse link
G LOC100910181 apolipoprotein C-I-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
negative regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 involved_in ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:7,935,771...7,961,207
Ensembl chr 6:7,935,771...7,961,207
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 involved_in ISO (PMID:11099417) RGD PMID:11099417 NCBI chr 6:7,961,413...7,980,708
Ensembl chr 6:7,961,413...7,980,708
JBrowse link
negative regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of ISO (PMID:21810484) RGD PMID:21810484 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
negative regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in
ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISO (PMID:22848640) RGD PMID:22848640 NCBI chr 5:126,031,368...126,053,726
Ensembl chr 5:126,031,368...126,053,726
JBrowse link
positive regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (MGI:3047008|PMID:15210959) RGD PMID:15210959 MGI:3047008 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abca12 ATP binding cassette subfamily A member 12 involved_in
acts_upstream_of_or_within
ISO (PMID:23931754)
MGI:1352463|MGI:4461044 (MGI:5510615|PMID:23931754)
RGD PMID:23931754 MGI:5510615 NCBI chr 9:78,521,477...78,693,421
Ensembl chr 9:78,522,464...78,693,028
JBrowse link
G Abca3 ATP binding cassette subfamily A member 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:25817392)
UniProt
RGD
PMID:25817392 GO_REF:0000024 NCBI chr10:13,723,365...13,780,558
Ensembl chr10:13,723,405...13,779,963
JBrowse link
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5553242|PMID:18429932)
Alzheimers_University_of_Toronto
RGD
PMID:18429932 GO_REF:0000024 MGI:5553242 NCBI chr 7:12,742,433...12,762,423
Ensembl chr 7:12,742,433...12,762,341
JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:23560799) RGD PMID:23560799 NCBI chr10:98,236,919...98,308,288
Ensembl chr10:98,237,141...98,294,522
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (MGI:3047008|PMID:15210959) RGD PMID:15210959 MGI:3047008 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing involved_in ISS
ISO
GO_REF:0000024
(PMID:18703020)
UniProt
RGD
PMID:18703020 GO_REF:0000024 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
ISS
(PMID:27472885)
GO_REF:0000024
RGD
UniProt
PMID:27472885 GO_REF:0000024 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoe apolipoprotein E involved_in IEA
ISO
GO_REF:0000107
(MGI:6448697|PMID:31902528)
UniProtKB:P08226 (PMID:12042316), (PMID:12401887), (PMID:14754908)
Ensembl
RGD
PMID:12042316 PMID:12401887 PMID:14754908 PMID:31902528 GO_REF:0000107 MGI:6448697 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Cav1 caveolin 1 involved_in ISO
IEA
(PMID:24576892)
GO_REF:0000107
RGD
Ensembl
PMID:24576892 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:16971496), (PMID:18599737), (PMID:18762277) RGD PMID:16971496 PMID:18599737 PMID:18762277 NCBI chr19:15,195,514...15,239,827
Ensembl chr19:15,033,108...15,239,821
JBrowse link
G Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 involved_in ISO (PMID:28082258)
(MGI:6162611|PMID:28082258)
RGD PMID:28082258 MGI:6162611 NCBI chr 8:26,651,241...26,758,330
Ensembl chr 8:26,652,121...26,758,325
JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (PMID:19481530) RGD PMID:19481530 NCBI chr10:56,524,327...56,527,447
Ensembl chr10:56,524,468...56,526,987
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:4358638|PMID:19718435) RGD PMID:19718435 MGI:4358638 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in ISO (PMID:16938301) RGD PMID:16938301 NCBI chr 6:76,267,227...76,270,457
Ensembl chr 6:76,267,228...76,270,457
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in
acts_upstream_of_or_within
ISO (PMID:17186944)
(MGI:3720271|PMID:17657314), (MGI:3794353|PMID:16825483)
MGI:2676312 (MGI:5510615|PMID:23931754)
RGD PMID:16825483 PMID:17186944 PMID:17657314 PMID:23931754 MGI:3720271 MGI:3794353 MGI:5510615 NCBI chr 1:100,554,577...100,559,896
Ensembl chr 1:100,554,544...100,559,942
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3794353|PMID:16825483)
(PMID:16141411), (PMID:17186944), (PMID:19481530)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16141411 PMID:16825483 PMID:17186944 PMID:19481530 GO_REF:0000024 GO_REF:0000107 MGI:3794353 NCBI chr 3:80,004,130...80,014,197
Ensembl chr 3:80,004,130...80,012,750
JBrowse link
G Pltp phospholipid transfer protein involved_in ISO (PMID:24369175) RGD PMID:24369175 NCBI chr 3:161,304,469...161,322,289
Ensembl chr 3:161,304,469...161,322,289
JBrowse link
G Pon1 paraoxonase 1 involved_in ISO (PMID:15721011) RGD PMID:15721011 NCBI chr 4:30,249,749...30,276,297
Ensembl chr 4:30,249,742...30,276,372
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:24751522) RGD PMID:24751522 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380
JBrowse link
G Ptch1 patched 1 involved_in ISO (PMID:21931618) RGD PMID:21931618 NCBI chr17:1,032,242...1,085,885
Ensembl chr17:1,029,048...1,093,873
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:3790014|PMID:17936707) RGD PMID:17936707 MGI:3790014 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6448697|PMID:31902528) RGD PMID:31902528 MGI:6448697 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Zdhhc8 zinc finger DHHC-type palmitoyltransferase 8 involved_in ISO (PMID:19556522) RGD PMID:19556522 NCBI chr11:86,903,122...86,917,261
Ensembl chr11:86,903,122...86,915,715
JBrowse link
positive regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Commd1 copper metabolism domain containing 1 acts_upstream_of_or_within ISO MGI:2176228|MGI:5315712 (MGI:5806548|PMID:26965651) RGD PMID:26965651 MGI:5806548 NCBI chr14:107,664,321...107,759,974
Ensembl chr14:107,664,255...107,760,191
JBrowse link
G Lrp1 LDL receptor related protein 1 IMP RGD PMID:22454363 RGD:13800524 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Scp2 sterol carrier protein 2 IDA RGD PMID:16772292 RGD:9850270 NCBI chr 5:127,647,934...127,735,703
Ensembl chr 5:127,620,274...127,735,739
JBrowse link
G Washc1 WASH complex subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5806548|PMID:26965651)
Ensembl
RGD
PMID:26965651 GO_REF:0000107 MGI:5806548 NCBI chr 9:113,918,914...113,936,861
Ensembl chr 9:113,918,858...113,936,860
JBrowse link
positive regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca13 ATP binding cassette subfamily A member 13 involved_in ISO (MGI:6694370|PMID:33478937)
(PMID:33478937)
RGD PMID:33478937 MGI:6694370 NCBI chr14:89,384,512...89,876,748
Ensembl chr14:89,384,512...89,714,917
JBrowse link
G Abcb4 ATP binding cassette subfamily B member 4 involved_in ISO
IEA
ISS
(PMID:17523162), (PMID:24045840)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17523162 PMID:24045840 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:22,133,984...22,192,687
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Lipg lipase G, endothelial type involved_in ISO (PMID:19136670) RGD PMID:19136670 NCBI chr18:70,903,528...70,924,434
Ensembl chr18:70,901,710...70,924,708
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in ISO (PMID:16141411) RGD PMID:16141411 NCBI chr 1:100,554,577...100,559,896
Ensembl chr 1:100,554,544...100,559,942
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO (PMID:16141411) RGD PMID:16141411 NCBI chr 3:80,004,130...80,014,197
Ensembl chr 3:80,004,130...80,012,750
JBrowse link
positive regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat2 acetyl-CoA acetyltransferase 2 involved_in ISO (MGI:5302163|PMID:22045928) RGD PMID:22045928 MGI:5302163 NCBI chr 1:47,972,399...47,992,654
Ensembl chr 1:47,972,399...47,992,653
JBrowse link
G Cyp8b1 cytochrome P450 family 8 subfamily B member 1 involved_in ISO (MGI:3588413|PMID:12393855) RGD PMID:12393855 MGI:3588413 NCBI chr 8:130,548,418...130,550,388
Ensembl chr 8:130,548,418...130,550,388
JBrowse link
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5574251|PMID:24650549)
UniProt
RGD
PMID:24650549 GO_REF:0000024 MGI:5574251 NCBI chr10:108,095,131...108,099,483
Ensembl chr10:108,095,131...108,099,483
JBrowse link
G Lpcat3 lysophosphatidylcholine acyltransferase 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5780634|PMID:26833026)
UniProt
RGD
PMID:26833026 GO_REF:0000024 MGI:5780634 NCBI chr 4:157,181,722...157,222,997
Ensembl chr 4:157,181,795...157,222,996
JBrowse link
positive regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scp2 sterol carrier protein 2 involved_in IBA
ISO
PMID:21873635
(PMID:15449949)
RGD PMID:15449949, PMID:21873635 RGD:13792537 NCBI chr 5:127,647,934...127,735,703
Ensembl chr 5:127,620,274...127,735,739
JBrowse link
G Scp2d1 SCP2 sterol-binding domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:138,973,171...138,975,624
Ensembl chr 3:138,974,871...138,975,621
JBrowse link
positive regulation of receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:22848640)
(MGI:5446858|PMID:22848640)
RGD PMID:22848640 MGI:5446858 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) RGD PMID:12417523 PMID:12464675 PMID:15166224 NCBI chr 5:152,964,294...152,987,286
Ensembl chr 5:152,966,591...152,987,211
JBrowse link
positive regulation of reverse cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6508518|PMID:32687853)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:32687853 GO_REF:0000024 GO_REF:0000107 MGI:6508518 NCBI chr10:98,573,226...98,645,028
Ensembl chr10:98,576,039...98,644,938
JBrowse link
receptor-mediated endocytosis involved in cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor involved_in ISO
IEA
(PMID:6299582)
GO_REF:0000107
RGD
Ensembl
PMID:6299582 GO_REF:0000107 NCBI chr 8:22,750,425...22,773,305
Ensembl chr 8:22,750,336...22,774,903
JBrowse link
G Ldlrap1 low density lipoprotein receptor adaptor protein 1 involved_in ISO (PMID:12417523), (PMID:12464675), (PMID:15166224) RGD PMID:12417523 PMID:12464675 PMID:15166224 NCBI chr 5:152,964,294...152,987,286
Ensembl chr 5:152,966,591...152,987,211
JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:4123883 (MGI:4413421|PMID:18948618)
RGD PMID:18948618, PMID:21873635 MGI:4413421, RGD:13792537 NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
JBrowse link
regulation of cholesterol efflux term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6508518|PMID:32687853)
GO_REF:0000107
(PMID:25125465)
UniProt
RGD
Ensembl
PMID:25125465 PMID:32687853 GO_REF:0000024 GO_REF:0000107 MGI:6508518 NCBI chr10:98,573,226...98,645,028
Ensembl chr10:98,576,039...98,644,938
JBrowse link
G Abca8 ATP binding cassette subfamily A member 8 involved_in ISO (PMID:28882873) RGD PMID:28882873 NCBI chr10:98,236,919...98,308,288
Ensembl chr10:98,237,141...98,294,522
JBrowse link
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20544018)
UniProt
RGD
PMID:20544018 GO_REF:0000024 NCBI chr 1:166,991,474...166,997,045
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
G LOC100361543 RhoA activator C11orf59-like involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:37,261,428...37,262,470
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
G Naxe NAD(P)HX epimerase involved_in ISS
ISO
GO_REF:0000024
ZFIN:ZDB-MRPHLNO-130813-3 (PMID:23719382)
UniProt
RGD
PMID:23719382 GO_REF:0000024 NCBI chr 2:187,424,319...187,426,410
Ensembl chr 2:187,424,327...187,426,375
JBrowse link
G Ttc39b tetratricopeptide repeat domain 39B involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5800596|PMID:27383786)
GO_REF:0000024
RGD
UniProt
PMID:27383786, PMID:21873635 GO_REF:0000024 MGI:5800596, RGD:13792537 NCBI chr 5:101,304,982...101,405,689
Ensembl chr 5:101,304,982...101,405,656
JBrowse link
G Ttc39d tetratricopeptide repeat domain 39D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:2,886,764...2,895,118
Ensembl chr 6:2,886,764...2,895,118
JBrowse link
regulation of cholesterol import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 involved_in ISO
ISS
(PMID:20544018)
GO_REF:0000024
RGD
UniProt
PMID:20544018 GO_REF:0000024 NCBI chr 1:166,991,474...166,997,045
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
G LOC100361543 RhoA activator C11orf59-like involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr  X:37,261,428...37,262,470
Ensembl chr 1:166,991,474...166,997,045
JBrowse link
regulation of cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 involved_in IEA
ISO
GO_REF:0000107
(PMID:11940599)
Ensembl
RGD
PMID:11940599 GO_REF:0000107 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3700008 (MGI:4941098|PMID:21147780)
Ensembl
RGD
PMID:21147780 GO_REF:0000107 MGI:4941098 NCBI chr 1:142,185,092...142,198,167
Ensembl chr 1:142,185,094...142,197,182
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:4358638|PMID:19718435) RGD PMID:19718435 MGI:4358638 NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
JBrowse link
G Osbpl6 oxysterol binding protein-like 6 involved_in ISO (PMID:26941018) RGD PMID:26941018 NCBI chr 3:63,257,646...63,455,105
Ensembl chr 3:63,353,178...63,454,967
JBrowse link
G Sec24a SEC24 homolog A, COPII coat complex component acts_upstream_of_or_within ISO (MGI:5496780|PMID:23580231) RGD PMID:23580231 MGI:5496780 NCBI chr10:37,138,539...37,215,899
Ensembl chr10:37,139,806...37,215,899
JBrowse link
regulation of intestinal cholesterol absorption term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:1339009|PMID:10073953)
RGD PMID:10073953, PMID:21873635 MGI:1339009, RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 acts_upstream_of_or_within ISO MGI:2157148 (MGI:84652|PMID:8962133) RGD PMID:8962133 MGI:84652 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoa4 apolipoprotein A4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2157162 (MGI:1096980|PMID:9323588)
RGD PMID:9323588, PMID:21873635 MGI:1096980, RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apoa5 apolipoprotein A5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:50,559,079...50,561,720
Ensembl chr 8:50,559,126...50,561,736
JBrowse link
G Lep leptin acts_upstream_of_or_within ISO (MGI:2386518|PMID:12114517) RGD PMID:12114517 MGI:2386518 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
regulation of intracellular cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:6478054|PMID:22748276)
(PMID:15238223)
UniProt
RGD
PMID:15238223 PMID:22748276 GO_REF:0000024 MGI:6478054 NCBI chr 3:2,648,787...2,668,770
Ensembl chr 3:2,648,885...2,668,809
JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator involved_in ISO (PMID:20663892) RGD PMID:20663892 NCBI chr19:57,484,720...57,496,539
Ensembl chr19:57,484,634...57,496,695
JBrowse link
G Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit acts_upstream_of_or_within ISO (MGI:4358633|PMID:19723497)
UniProtKB:P61916 (PMID:19723497)
RGD PMID:19723497 MGI:4358633 NCBI chr20:33,557,052...33,584,011
Ensembl chr20:33,557,052...33,584,010
JBrowse link
reverse cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (PMID:10431236)
(MGI:3720273|PMID:17657311)
RGD PMID:10431236 PMID:17657311 MGI:3720273 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (MGI:3720273|PMID:17657311) RGD PMID:17657311 MGI:3720273 NCBI chr20:9,743,269...9,842,735
Ensembl chr20:9,743,269...9,840,489
JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
IBA
(PMID:15464323)
PMID:21873635
RGD PMID:15464323, PMID:21873635 RGD:13792537 NCBI chr 8:50,525,091...50,526,875
Ensembl chr 8:50,525,091...50,526,875
JBrowse link
G Apoa2 apolipoprotein A2 involved_in ISO (PMID:14967812) RGD PMID:14967812 NCBI chr13:89,596,872...89,598,805
Ensembl chr13:89,597,138...89,598,802
JBrowse link
G Apoa4 apolipoprotein A4 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:3095477)
Ensembl
RGD
PMID:3095477, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 8:50,536,983...50,539,371
Ensembl chr 8:50,537,009...50,539,376
JBrowse link
G Apoe apolipoprotein E involved_in IEA
ISO
GO_REF:0000107
(PMID:8127890)
Ensembl
RGD
PMID:8127890 GO_REF:0000107 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Apom apolipoprotein M acts_upstream_of_or_within ISO (MGI:3575626|PMID:15793583) RGD PMID:15793583 MGI:3575626 NCBI chr20:5,120,473...5,123,073
Ensembl chr20:5,120,474...5,123,073
JBrowse link
G Ces1d carboxylesterase 1D involved_in ISO (PMID:18599737), (PMID:18762277) RGD PMID:18599737 PMID:18762277 NCBI chr19:15,195,514...15,239,827
Ensembl chr19:15,033,108...15,239,821
JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO MGI:2384427 (MGI:3575626|PMID:15793583) RGD PMID:15793583 MGI:3575626 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Lcat lecithin cholesterol acyltransferase involved_in ISO (PMID:4335615) RGD PMID:4335615 NCBI chr19:37,913,333...37,916,799
Ensembl chr19:37,913,336...37,916,813
JBrowse link
G Lipg lipase G, endothelial type involved_in ISO (PMID:19136670) RGD PMID:19136670 NCBI chr18:70,903,528...70,924,434
Ensembl chr18:70,901,710...70,924,708
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO
ISS
(PMID:9211901)
(MGI:3842875|PMID:19136670)
GO_REF:0000024
RGD
BHF-UCL
PMID:9211901 PMID:19136670 GO_REF:0000024 MGI:3842875 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
sterol transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a24 solute carrier family 22, member 24 involved_in ISO (PMID:31553721) RGD PMID:31553721 NCBI chr 1:222,969,899...223,522,893 JBrowse link
vesicle-mediated cholesterol transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:29353240)
UniProt
RGD
PMID:29353240 GO_REF:0000024 NCBI chr17:85,533,056...85,748,843 JBrowse link
G Syt7 synaptotagmin 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:5645834|PMID:25860611)
UniProt
RGD
PMID:25860611 GO_REF:0000024 MGI:5645834 NCBI chr 1:226,435,816...226,498,008
Ensembl chr 1:226,435,979...226,493,377
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    localization 6443
      macromolecule localization 3012
        lipid localization 458
          lipid transport 406
            sterol transport 119
              cholesterol transport + 105
              intermembrane sterol transfer 0
              intracellular sterol transport + 27
              negative regulation of sterol transport + 15
              positive regulation of sterol transport + 38
              regulation of sterol transport + 65
              sterol import + 14
              sterol transmembrane transport 1
Path 2
Term Annotations click to browse term
  biological_process 19491
    localization 6443
      establishment of localization 4862
        transport 4698
          organic substance transport 2477
            lipid transport 406
              sterol transport 119
                cholesterol transport + 105
                intermembrane sterol transfer 0
                intracellular sterol transport + 27
                negative regulation of sterol transport + 15
                positive regulation of sterol transport + 38
                regulation of sterol transport + 65
                sterol import + 14
                sterol transmembrane transport 1
paths to the root