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ONTOLOGY REPORT - ANNOTATIONS


Term:carnitine transport
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Accession:GO:0015879 term browser browse the term
Definition:The directed movement of carnitine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.
Synonyms:exact_synonym: vitamin Bt transport


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carnitine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdzk1 PDZ domain containing 1 involved_in ISO (PMID:15523054) RGD PMID:15523054 NCBI chr 2:198,965,685...198,999,323
Ensembl chr 2:198,965,685...198,999,323
JBrowse link
G Slc22a16 solute carrier family 22 member 16 involved_in
acts_upstream_of_or_within
ISO (PMID:12089149) RGD PMID:12089149 NCBI chr20:45,658,398...45,669,192 JBrowse link
G Slc22a4 solute carrier family 22 member 4 acts_upstream_of_or_within ISO (MGI:1928404|PMID:11010964)
(PMID:16729965)
RGD PMID:11010964 PMID:16729965 MGI:1928404 NCBI chr10:39,334,972...39,373,508 JBrowse link
G Slc22a5 solute carrier family 22 member 5 acts_upstream_of_or_within
involved_in
IDA
ISO
IMP
MGI:1856926 (MGI:1206151|PMID:9634010), (MGI:1327457|PMID:9916797), (MGI:1338996|PMID:10087008), (MGI:1351704|PMID:10498652), (MGI:1928404|PMID:11010964), (MGI:66711|PMID:8155735), (MGI:81093|PMID:8670273)
(PMID:9685390), (PMID:9916797)
sodium-dependent
RGD PMID:8155735 PMID:8670273 PMID:9634010 PMID:9685390 PMID:9916797 PMID:10087008 PMID:10498652 PMID:11010964, PMID:9792817, PMID:10636865, PMID:12644265, PMID:15923388, PMID:16322553 MGI:1206151 MGI:1327457 MGI:1338996 MGI:1351704 MGI:1928404 MGI:66711 MGI:81093, RGD:730132, RGD:1643135, RGD:1643141, RGD:1643142, RGD:1643150 NCBI chr10:39,201,101...39,228,090
Ensembl chr10:39,201,107...39,323,853
JBrowse link
G Slc25a29 solute carrier family 25 member 29 NOT|involved_in ISO
ISS
(PMID:24652292)
GO_REF:0000024
RGD
UniProt
PMID:24652292 GO_REF:0000024 NCBI chr 6:132,736,964...132,747,912
Ensembl chr 6:132,735,883...132,747,828
JBrowse link
(R)-carnitine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a5 solute carrier family 22 member 5 involved_in IMP
IEA
ISO
PMID:28257821
GO_REF:0000107
(MGI:6437032|PMID:14595704)
(PMID:23877104)
Ensembl
RGD
PMID:14595704 PMID:23877104, PMID:28257821 GO_REF:0000107 MGI:6437032, RGD:30309931 NCBI chr10:39,201,101...39,228,090
Ensembl chr10:39,201,107...39,323,853
JBrowse link
carnitine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a4 solute carrier family 22 member 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:39,334,972...39,373,508 JBrowse link
G Slc25a20 solute carrier family 25 member 20 involved_in IDA PMID:9731180 RGD
UniProt
PMID:2223786, PMID:9731180 RGD:13440120, RGD:39458032 NCBI chr 8:117,455,308...117,476,762
Ensembl chr 8:117,455,262...117,476,734
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19610
    localization 6453
      establishment of localization 4869
        transport 4704
          organic substance transport 2474
            organic cation transport 38
              carnitine transport 6
                (R)-carnitine transport + 1
                carnitine transmembrane transport + 3
Path 2
Term Annotations click to browse term
  biological_process 19610
    localization 6453
      establishment of localization 4869
        transport 4704
          ion transport 1647
            cation transport 1265
              organic cation transport 38
                carnitine transport 6
                  (R)-carnitine transport + 1
                  carnitine transmembrane transport + 3
paths to the root