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ONTOLOGY REPORT - ANNOTATIONS


Term:choline transport
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Accession:GO:0015871 term browser browse the term
Definition:The directed movement of choline into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.


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choline transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1930937 (MGI:3698892|PMID:17196556) RGD PMID:17196556 MGI:3698892 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Scn4a sodium voltage-gated channel alpha subunit 4 IMP RGD PMID:20926383 RGD:7243169 NCBI chr10:94,505,026...94,557,803
Ensembl chr10:94,505,026...94,557,764
JBrowse link
G Sec14l1 SEC14-like lipid binding 1 involved_in ISO (PMID:17092608) RGD PMID:17092608 NCBI chr10:106,065,712...106,112,859
Ensembl chr10:106,065,712...106,112,857
JBrowse link
G Slc22a2 solute carrier family 22 member 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:9687576)
Ensembl
RGD
PMID:9687576 GO_REF:0000107 NCBI chr 1:48,318,025...48,360,219
Ensembl chr 1:48,317,995...48,360,261
JBrowse link
G Slc44a1 solute carrier family 44 member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
IMP
PMID:21873635
(MGI:6383289|PMID:19519661)
(MGI:3055690|PMID:15474312)
GO_REF:0000107
(PMID:16319125), (PMID:20410607)
RGD
Ensembl
PMID:15474312 PMID:16319125 PMID:19519661 PMID:20410607, PMID:21873635, PMID:19519661 GO_REF:0000107 MGI:3055690 MGI:6383289, RGD:13792537, RGD:15090833 NCBI chr 5:70,243,643...70,424,115
Ensembl chr 5:70,245,843...70,424,112
JBrowse link
G Slc44a2 solute carrier family 44 member 2 involved_in IBA
ISO
PMID:21873635
(PMID:20410607)
RGD PMID:20410607, PMID:21873635 RGD:13792537 NCBI chr 8:22,351,277...22,385,869
Ensembl chr 8:22,368,745...22,385,864
JBrowse link
G Slc44a4 solute carrier family 44, member 4 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:23651124), (PMID:28013291)
UniProt
RGD
PMID:23651124 PMID:28013291, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:4,593,389...4,609,641
Ensembl chr20:4,593,389...4,609,631
JBrowse link
G Slc5a7 solute carrier family 5 member 7 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:3045463 (MGI:3044863|PMID:15173594), (MGI:3698892|PMID:17196556)
GO_REF:0000107
RGD
Ensembl
PMID:15173594 PMID:17196556, PMID:21873635 GO_REF:0000107 MGI:3044863 MGI:3698892, RGD:13792537 NCBI chr 9:5,294,377...5,330,822
Ensembl chr 9:5,294,381...5,330,815
JBrowse link
G Slc6a8 solute carrier family 6 member 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:157,129,987...157,139,321
Ensembl chr  X:157,129,987...157,139,291
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    localization 6449
      establishment of localization 4865
        transport 4700
          nitrogen compound transport 2033
            choline transport 9
Path 2
Term Annotations click to browse term
  biological_process 19612
    localization 6449
      establishment of localization 4865
        transport 4700
          ion transport 1646
            cation transport 1264
              organic cation transport 38
                choline transport 9
paths to the root