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ONTOLOGY REPORT - ANNOTATIONS

Term:choline transport
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Accession:GO:0015871 term browser browse the term
Definition:The directed movement of choline into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Choline (2-hydroxyethyltrimethylammonium) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.


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choline transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flvcr1 FLVCR choline and heme transporter 1 involved_in ISO (PMID:38778100) RGD PMID:38778100 NCBI chr13:102,586,263...102,608,647
Ensembl chr13:102,586,257...102,608,661 		JBrowse link
G Flvcr2 FLVCR choline and putative heme transporter 2 involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
(PMID:38302740), (PMID:38778100)
GO_REF:0000107
(PMID:38693257)		 UniProt
RGD
Ensembl		 PMID:38302740 PMID:38693257 PMID:38778100 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:105,408,355...105,472,355
Ensembl chr 6:105,408,339...105,472,353 		JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1930937 (PMID:17196556) RGD PMID:17196556 NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650 		JBrowse link
G Scn4a sodium voltage-gated channel alpha subunit 4 IMP RGD PMID:20926383 RGD:7243169 NCBI chr10:91,246,936...91,296,670
Ensembl chr10:91,246,936...91,296,545 		JBrowse link
G Sec14l1 SEC14-like lipid binding 1 involved_in ISO (PMID:17092608) RGD PMID:17092608 NCBI chr10:102,319,920...102,367,070
Ensembl chr10:102,319,920...102,367,068 		JBrowse link
G Slc22a2 solute carrier family 22 member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:9687576)		 Ensembl
RGD		 PMID:9687576 GO_REF:0000107 NCBI chr 1:48,121,061...48,163,268
Ensembl chr 1:48,121,061...48,163,268 		JBrowse link
G Slc44a1 solute carrier family 44 member 1 involved_in IMP
ISO
ISS
IEA
IBA		 PMID:19519661
(PMID:16319125), (PMID:19357133), (PMID:20410607), (PMID:23651124), (PMID:33789160)
GO_REF:0000024
GO_REF:0000107
GO_REF:0000033
(PMID:19519661)		 RGD
UniProt
Ensembl
GO_Central		 PMID:16319125 PMID:19357133 PMID:19519661 PMID:20410607 PMID:23651124 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:15090833 NCBI chr 5:68,061,941...68,241,912
Ensembl chr 5:68,063,618...68,241,909 		JBrowse link
G Slc44a2 solute carrier family 44 member 2 involved_in
NOT|involved_in		 ISO
ISS
IEA		 (PMID:20410607), (PMID:23651124), (PMID:33789160)
(PMID:10677542), (PMID:20665236)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:10677542 PMID:20410607 PMID:20665236 PMID:23651124 PMID:33789160 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:19,870,867...19,905,345
Ensembl chr 8:19,870,888...19,905,342 		JBrowse link
G Slc44a4 solute carrier family 44, member 4 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:23651124), (PMID:28013291)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:23651124 PMID:28013291 GO_REF:0000024 GO_REF:0000033 NCBI chr20:3,903,099...3,919,215
Ensembl chr20:3,903,099...3,919,215 		JBrowse link
G Slc44a5 solute carrier family 44, member 5 involved_in ISO (PMID:23651124) RGD PMID:23651124 NCBI chr 2:242,911,050...243,208,018
Ensembl chr 2:242,911,325...243,206,404 		JBrowse link
G Slc5a7 solute carrier family 5 member 7 involved_in
acts_upstream_of_or_within		 IEA
ISO
IDA
IBA		 GO_REF:0000107
(PMID:11027560), (PMID:11068039), (PMID:12237312), (PMID:12969261), (PMID:17005849), (PMID:23132865), (PMID:23141292), (PMID:27569547)
PMID:10649566
GO_REF:0000033
MGI:3045463 (PMID:15173594), (PMID:17196556)
(PMID:11709061), (PMID:15173594)		 Ensembl
RGD
GO_Central		 PMID:11027560 PMID:11068039 PMID:11709061 PMID:12237312 PMID:12969261 More... GO_REF:0000033 GO_REF:0000107, RGD:68853 NCBI chr 9:7,595,440...7,626,258
Ensembl chr 9:7,595,444...7,626,258 		JBrowse link
G Slc6a8 solute carrier family 6 member 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:151,384,675...151,393,979
Ensembl chr  X:151,384,675...151,393,979 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20076
    localization 5699
      establishment of localization 5002
        transport 4697
          nitrogen compound transport 2010
            choline transport 12
paths to the root