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ONTOLOGY REPORT - ANNOTATIONS


Term:gamma-aminobutyric acid transport
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Accession:GO:0015812 term browser browse the term
Definition:The directed movement of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
Comment:See also the biological process term 'neurotransmitter transport ; GO:0006836'.
Synonyms:exact_synonym: 4-aminobutanoate transport;   4-aminobutyrate transport;   GABA transport


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gamma-aminobutyric acid transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc32a1 solute carrier family 32 member 1 IDA PMID:9349821 BHF-UCL PMID:9349821 RGD:730037 NCBI chr 3:155,102,980...155,107,815
Ensembl chr 3:155,103,150...155,107,817
JBrowse link
G Slc6a11 solute carrier family 6 member 11 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:146,106,386...146,223,228
Ensembl chr 4:146,106,386...146,223,228
JBrowse link
G Slc6a12 solute carrier family 6 member 12 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:153,921,199...153,941,333
Ensembl chr 4:153,921,115...153,941,391
JBrowse link
G Slc6a13 solute carrier family 6 member 13 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:153,874,942...153,912,185
Ensembl chr 4:153,874,852...153,912,155
JBrowse link
gamma-aminobutyric acid import term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc6a1 solute carrier family 6 member 1 IDA
ISO
(MGI:6415648|PMID:15106822)
(PMID:10973981)
RGD PMID:10973981, PMID:15106822, PMID:16378241 MGI:6415648, RGD:1643199 NCBI chr 4:146,258,842...146,292,176
Ensembl chr 4:146,276,862...146,292,213
JBrowse link
G Slc6a13 solute carrier family 6 member 13 IDA
IMP
PMID:21997971
PMID:22678999
ARUK-UCL PMID:21997971, PMID:22678999 RGD:30309942, RGD:30309926 NCBI chr 4:153,874,942...153,912,185
Ensembl chr 4:153,874,852...153,912,155
JBrowse link
G Slc6a6 solute carrier family 6 member 6 IGI
IDA
PMID:29491210
PMID:18501699
ARUK-UCL PMID:29491210, PMID:18501699 RGD:21201269, RGD:30309916 NCBI chr 4:123,638,619...123,713,469
Ensembl chr 4:123,642,210...123,713,464
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 IGI PMID:29491210 ARUK-UCL PMID:29491210 RGD:21201269 NCBI chr10:103,713,045...103,730,145
Ensembl chr10:103,713,045...103,730,145
JBrowse link
gamma-aminobutyric acid secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apba1 amyloid beta precursor protein binding family A member 1 IEA
ISO
GO_REF:0000107
MGI:2450729 (MGI:3691953|PMID:17167098)
Ensembl
RGD
PMID:17167098 GO_REF:0000107, MGI:3691953 NCBI chr 1:241,594,565...241,796,512
Ensembl chr 1:241,594,565...241,796,513
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A IEA
ISO
GO_REF:0000107
MGI:1856209 (MGI:1353373|PMID:10670432)
Ensembl
RGD
PMID:10670432 GO_REF:0000107, MGI:1353373 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ISO MGI:1856936 (MGI:76872|PMID:7595494) RGD PMID:7595494 MGI:76872 NCBI chr 3:37,950,846...38,211,478
Ensembl chr 3:37,955,069...38,090,526
JBrowse link
G Grm4 glutamate metabotropic receptor 4 TAS PMID:11906782 UniProt PMID:11906782 RGD:8554275 NCBI chr20:6,745,682...6,791,521
Ensembl chr20:6,745,682...6,791,519
JBrowse link
G Trpc4 transient receptor potential cation channel, subfamily C, member 4 IEA
ISO
GO_REF:0000107
MGI:2387666 (MGI:3029676|PMID:14668438)
Ensembl
RGD
PMID:14668438 GO_REF:0000107, MGI:3029676 NCBI chr 2:143,433,102...143,605,757
Ensembl chr 2:143,475,323...143,604,972
JBrowse link
gamma-aminobutyric acid secretion, neurotransmission term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nf1 neurofibromin 1 IEA
ISO
GO_REF:0000107
MGI:1339975 (MGI:5620820|PMID:25242307)
Ensembl
RGD
PMID:25242307 GO_REF:0000107, MGI:5620820 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO MGI:97306 (MGI:5620820|PMID:25242307) RGD PMID:25242307 MGI:5620820 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
negative regulation of gamma-aminobutyric acid secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:7722510 RGD:10046061 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Gabbr1 gamma-aminobutyric acid type B receptor subunit 1 IMP RGD PMID:14654095 RGD:2315494 NCBI chr20:1,955,344...1,984,907
Ensembl chr20:1,955,359...1,984,863
JBrowse link
G Hrh3 histamine receptor H3 IMP RGD PMID:17350613 RGD:1626417 NCBI chr 3:175,474,310...175,479,395
Ensembl chr 3:175,473,078...175,479,395
JBrowse link
G Htr1a 5-hydroxytryptamine receptor 1A IMP PMID:30217553 CACAO PMID:30217553 RGD:15023474 NCBI chr 2:36,246,628...36,247,896
Ensembl chr 2:36,246,628...36,247,896
JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B IDA PMID:30217553 CACAO PMID:30217553 RGD:15023474 NCBI chr 8:89,113,984...89,130,830
Ensembl chr 8:89,129,453...89,130,991
JBrowse link
G Htr6 5-hydroxytryptamine receptor 6 IMP RGD PMID:16987217 RGD:2317005 NCBI chr 5:157,501,202...157,518,870
Ensembl chr 5:157,503,040...157,518,631
JBrowse link
positive regulation of gamma-aminobutyric acid secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grik1 glutamate ionotropic receptor kainate type subunit 1 ISO MGI:2176347 (MGI:3769099|PMID:17245443) RGD PMID:17245443 MGI:3769099 NCBI chr11:27,811,954...28,213,940
Ensembl chr11:27,811,957...27,971,359
JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C IMP RGD PMID:17043669 RGD:1625001 NCBI chr  X:118,084,520...118,318,040
Ensembl chr  X:118,084,890...118,318,039
JBrowse link
G Htr6 5-hydroxytryptamine receptor 6 IMP RGD PMID:19660530 RGD:2316998 NCBI chr 5:157,501,202...157,518,870
Ensembl chr 5:157,503,040...157,518,631
JBrowse link
G Ntsr1 neurotensin receptor 1 IMP RGD PMID:15716398 RGD:9743972 NCBI chr 3:175,982,313...176,046,345
Ensembl chr 3:175,885,894...176,046,345
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO MGI:2386080 (MGI:3610634|PMID:15640761) RGD PMID:15640761 MGI:3610634 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Slc6a1 solute carrier family 6 member 1 IMP RGD PMID:14500747 RGD:1643212 NCBI chr 4:146,258,842...146,292,176
Ensembl chr 4:146,276,862...146,292,213
JBrowse link
G Trh thyrotropin releasing hormone IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16990402, PMID:21873635 RGD:1600408, RGD:13792537 NCBI chr 4:124,110,716...124,113,242
Ensembl chr 4:124,110,716...124,113,242
JBrowse link
regulation of gamma-aminobutyric acid secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sv2a synaptic vesicle glycoprotein 2a IMP RGD PMID:27265781 RGD:12792961 NCBI chr 2:198,321,100...198,336,889
Ensembl chr 2:198,321,142...198,336,913
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      establishment of localization 4886
        transport 4734
          nitrogen compound transport 2118
            amino acid transport 175
              gamma-aminobutyric acid transport 26
                gamma-aminobutyric acid import 4
                gamma-aminobutyric acid reuptake + 0
                gamma-aminobutyric acid secretion + 20
Path 2
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      establishment of localization 4886
        transport 4734
          ion transport 3500
            anion transport 2681
              organic substance transport 2558
                organic acid transport 346
                  amino acid transport 175
                    gamma-aminobutyric acid transport 26
                      gamma-aminobutyric acid import 4
                      gamma-aminobutyric acid reuptake + 0
                      gamma-aminobutyric acid secretion + 20
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.