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ONTOLOGY REPORT - ANNOTATIONS


Term:basic amino acid transport
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Accession:GO:0015802 term browser browse the term
Definition:The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.



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basic amino acid transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a1 solute carrier family 7 member 1 TAS RGD PMID:8939918 RGD:730128 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849
JBrowse link
basic amino acid transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a1 solute carrier family 7 member 1 involved_in ISO (PMID:17197568) RGD PMID:17197568 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849
JBrowse link
G Slc7a6 solute carrier family 7 member 6 involved_in ISO (PMID:17197568) RGD PMID:17197568 NCBI chr19:34,073,472...34,100,268
Ensembl chr19:34,074,286...34,100,268
JBrowse link
G Slc7a7 solute carrier family 7 member 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:27,822,088...27,873,121
Ensembl chr15:27,822,091...27,865,648
JBrowse link
histidine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:9092568 PMID:21873635 RGD:1299463, RGD:13792537 NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
JBrowse link
G Slc38a3 solute carrier family 38, member 3 involved_in
acts_upstream_of_or_within
ISO
IDA
IBA
(PMID:10823827)
(MGI:2138068|PMID:10716701)
PMID:10619430
PMID:21873635
RGD PMID:10716701 PMID:10823827 PMID:10619430 PMID:21873635 MGI:2138068, RGD:634178, RGD:13792537 NCBI chr 8:108,323,889...108,339,959
Ensembl chr 8:108,323,894...108,339,988
JBrowse link
L-arginine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO
IBA
ISS
(PMID:16251196)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:16251196 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:74058|PMID:8529105)
GO_REF:0000107
RGD
Ensembl
PMID:8529105 GO_REF:0000107 MGI:74058 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
JBrowse link
G Slc25a29 solute carrier family 25 member 29 involved_in ISO
ISS
(PMID:24652292)
GO_REF:0000024
RGD
UniProt
PMID:24652292 GO_REF:0000024 NCBI chr 6:127,742,027...127,752,915
Ensembl chr 6:127,742,033...127,752,940
JBrowse link
G Slc38a9 solute carrier family 38, member 9 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:44,291,637...44,374,897
Ensembl chr 2:44,291,989...44,368,955
JBrowse link
G Slc66a1 solute carrier family 66 member 1 involved_in IEA
ISO
GO_REF:0000108
(PMID:22822152)
GOC
RGD
PMID:22822152 GO_REF:0000108 NCBI chr 5:151,537,870...151,552,338
Ensembl chr 5:151,542,376...151,552,259
JBrowse link
G Slc7a1 solute carrier family 7 member 1 involved_in
acts_upstream_of_or_within
IMP
IEA
ISO
GO_REF:0000108
(MGI:66868|PMID:8385111), (MGI:67167|PMID:8195186)
(PMID:26449889)
GO_REF:0000107
GOC
RGD
Ensembl
PMID:8195186 PMID:8385111 PMID:26449889 PMID:17234578 GO_REF:0000107 GO_REF:0000108 MGI:66868 MGI:67167, RGD:1642930 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849
JBrowse link
G Slc7a2 solute carrier family 7 member 2 acts_upstream_of_or_within IDA
ISO
MGI:2150359 (MGI:1934545|PMID:11278602), (MGI:2656016|PMID:12675924) RGD PMID:11278602 PMID:12675924 PMID:8626679 PMID:11329533 PMID:16998217 MGI:1934545 MGI:2656016, RGD:1642931, RGD:1642932, RGD:1642934 NCBI chr16:51,417,478...51,470,784
Ensembl chr16:51,417,493...51,470,784
JBrowse link
G Slc7a3 solute carrier family 7 member 3 acts_upstream_of_or_within IDA
ISO
IMP
(MGI:1098061|PMID:9334265) RGD PMID:9334265 PMID:9079705 PMID:17234578 MGI:1098061, RGD:68219, RGD:1642930 NCBI chr  X:66,210,071...66,216,482
Ensembl chr  X:66,210,081...66,215,708
JBrowse link
L-histidine transmembrane export from vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:5897714|PMID:27845049)
Ensembl
RGD
PMID:27845049 GO_REF:0000107 MGI:5897714 NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
JBrowse link
lysine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc66a1 solute carrier family 66 member 1 involved_in ISO (PMID:22822152) RGD PMID:22822152 NCBI chr 5:151,537,870...151,552,338
Ensembl chr 5:151,542,376...151,552,259
JBrowse link
G Slc7a1 solute carrier family 7 member 1 involved_in ISO
IEA
(PMID:11891586)
GO_REF:0000107
RGD
Ensembl
PMID:11891586 GO_REF:0000107 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849
JBrowse link
G Slc7a3 solute carrier family 7 member 3 IDA RGD PMID:9079705 RGD:68219 NCBI chr  X:66,210,071...66,216,482
Ensembl chr  X:66,210,081...66,215,708
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    localization 6488
      establishment of localization 4887
        transport 4725
          nitrogen compound transport 2066
            amino acid transport 175
              basic amino acid transport 12
                basic amino acid transmembrane transport + 11
                histidine transport + 2
                lysine transport + 3
Path 2
Term Annotations click to browse term
  biological_process 19497
    localization 6488
      establishment of localization 4887
        transport 4725
          organic substance transport 2506
            organic acid transport 357
              amino acid transport 175
                basic amino acid transport 12
                  basic amino acid transmembrane transport + 11
                  histidine transport + 2
                  lysine transport + 3
paths to the root