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ONTOLOGY REPORT - ANNOTATIONS


Term:basic amino acid transport
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Accession:GO:0015802 term browser browse the term
Definition:The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.



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basic amino acid transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC3A1 solute carrier family 3 member 1 involved_in TAS (PMID:8054986) PINC PMID:8054986 NCBI chr 2:44,275,464...44,321,494
Ensembl chr 2:44,275,458...44,321,494
JBrowse link
basic amino acid transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC3A1 solute carrier family 3 member 1 involved_in IEA GOC GO_REF:0000108 NCBI chr 2:44,275,464...44,321,494
Ensembl chr 2:44,275,458...44,321,494
JBrowse link
G SLC7A1 solute carrier family 7 member 1 involved_in IMP (PMID:17197568) ARUK-UCL PMID:17197568 NCBI chr13:29,509,410...29,595,688
Ensembl chr13:29,509,414...29,595,688
JBrowse link
G SLC7A4 solute carrier family 7 member 4 involved_in IEA GOC GO_REF:0000108 NCBI chr22:21,028,718...21,032,561
Ensembl chr22:21,028,718...21,032,840
JBrowse link
G SLC7A6 solute carrier family 7 member 6 involved_in IMP (PMID:17197568) ARUK-UCL PMID:17197568 NCBI chr16:68,264,510...68,301,819
Ensembl chr16:68,264,516...68,301,823
JBrowse link
G SLC7A7 solute carrier family 7 member 7 involved_in TAS (PMID:9829974) GO_Central PMID:9829974 NCBI chr14:22,773,222...22,819,796
Ensembl chr14:22,773,222...22,829,820
JBrowse link
histidine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC15A4 solute carrier family 15 member 4 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:9092568 PMID:21873635 RGD:1299463 NCBI chr12:128,793,194...128,823,966
Ensembl chr12:128,793,194...128,823,958
JBrowse link
G SLC38A3 solute carrier family 38 member 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IDA
(PMID:21873635)
(MGI:2138068|PMID:10716701)
(PMID:10823827)
GO_Central
MGI
UniProt
PMID:10716701 PMID:10823827 PMID:21873635 MGI:2138068 NCBI chr 3:50,205,268...50,221,486
Ensembl chr 3:50,205,246...50,221,486
JBrowse link
L-arginine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IDA
IBA
(PMID:16251196)
(PMID:21873635)
UniProt
GO_Central
PMID:16251196 PMID:21873635 NCBI chr16:28,466,653...28,492,082
Ensembl chr16:28,474,111...28,495,575
JBrowse link
G SLC11A1 solute carrier family 11 member 1 acts_upstream_of_or_within ISO (MGI:74058|PMID:8529105) MGI PMID:8529105 MGI:74058 NCBI chr 2:218,381,766...218,396,894
Ensembl chr 2:218,382,029...218,396,894
JBrowse link
G SLC25A29 solute carrier family 25 member 29 involved_in IDA (PMID:24652292) UniProt PMID:24652292 NCBI chr14:100,277,986...100,306,536
Ensembl chr14:100,291,116...100,306,547
JBrowse link
G SLC66A1 solute carrier family 66 member 1 involved_in IDA (PMID:22822152) UniProt PMID:22822152 NCBI chr 1:19,312,302...19,332,611
Ensembl chr 1:19,312,326...19,329,300
JBrowse link
G SLC66A1L solute carrier family 66 member 1 like involved_in IEA GOC GO_REF:0000108 NCBI chr 3:157,543,312...157,601,094
Ensembl chr 3:157,543,246...157,677,749
JBrowse link
G SLC7A1 solute carrier family 7 member 1 acts_upstream_of_or_within
involved_in
ISO
IMP
(MGI:66868|PMID:8385111), (MGI:67167|PMID:8195186)
(PMID:26449889)
RGD
MGI
ARUK-UCL
PMID:8195186 PMID:8385111 PMID:17234578 PMID:26449889 MGI:66868 MGI:67167 RGD:1642930 NCBI chr13:29,509,410...29,595,688
Ensembl chr13:29,509,414...29,595,688
JBrowse link
G SLC7A2 solute carrier family 7 member 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:1934545|PMID:11278602), (MGI:2656016|PMID:12675924) RGD
GOC
MGI
PMID:8626679 PMID:11278602 PMID:11329533 PMID:12675924 PMID:16998217 GO_REF:0000108 MGI:1934545 MGI:2656016 RGD:1642931 RGD:1642932 RGD:1642934 NCBI chr 8:17,494,349...17,570,566
Ensembl chr 8:17,497,088...17,570,573
JBrowse link
G SLC7A3 solute carrier family 7 member 3 acts_upstream_of_or_within ISO (MGI:1098061|PMID:9334265) RGD
MGI
PMID:9079705 PMID:9334265 PMID:17234578 MGI:1098061 RGD:1642930 RGD:68219 NCBI chr  X:70,925,579...70,931,096
Ensembl chr  X:70,925,579...70,931,125
JBrowse link
L-histidine transmembrane export from vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC15A4 solute carrier family 15 member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:128,793,194...128,823,966
Ensembl chr12:128,793,194...128,823,958
JBrowse link
lysine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC66A1 solute carrier family 66 member 1 involved_in IDA (PMID:22822152) UniProt PMID:22822152 NCBI chr 1:19,312,302...19,332,611
Ensembl chr 1:19,312,326...19,329,300
JBrowse link
G SLC7A1 solute carrier family 7 member 1 involved_in IDA (PMID:11891586) ARUK-UCL PMID:11891586 NCBI chr13:29,509,410...29,595,688
Ensembl chr13:29,509,414...29,595,688
JBrowse link
G SLC7A3 solute carrier family 7 member 3 ISO RGD PMID:9079705 RGD:68219 NCBI chr  X:70,925,579...70,931,096
Ensembl chr  X:70,925,579...70,931,125
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18605
    localization 6698
      establishment of localization 5076
        transport 4915
          nitrogen compound transport 2272
            amino acid transport 177
              basic amino acid transport 14
                basic amino acid transmembrane transport + 13
                histidine transport + 2
                lysine transport + 3
Path 2
Term Annotations click to browse term
  biological_process 18605
    localization 6698
      establishment of localization 5076
        transport 4915
          organic substance transport 2728
            organic acid transport 369
              amino acid transport 177
                basic amino acid transport 14
                  basic amino acid transmembrane transport + 13
                  histidine transport + 2
                  lysine transport + 3
paths to the root