Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:basic amino acid transport
go back to main search page
Accession:GO:0015802 term browser browse the term
Definition:The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


show annotations for term's descendants           Sort by:
 
basic amino acid transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a1 solute carrier family 7 member 1 TAS RGD PMID:8939918 RGD:730128 NCBI chr12:8,032,775...8,108,972
Ensembl chr12:8,032,809...8,108,972
JBrowse link
arginine transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc66a1 solute carrier family 66 member 1 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:157,744,945...157,759,370
Ensembl chr 5:157,745,490...157,759,322
JBrowse link
G Slc7a1 solute carrier family 7 member 1 ISO
IEA
(PMID:26449889)
GO_REF:0000107
RGD
Ensembl
PMID:26449889 GO_REF:0000107 NCBI chr12:8,032,775...8,108,972
Ensembl chr12:8,032,809...8,108,972
JBrowse link
arginine transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO
IBA
ISS
(PMID:16251196)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:16251196, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:197,986,384...197,999,726
Ensembl chr 1:197,986,385...197,997,664
JBrowse link
G Slc66a1 solute carrier family 66 member 1 ISO (PMID:22822152) RGD PMID:22822152 NCBI chr 5:157,744,945...157,759,370
Ensembl chr 5:157,745,490...157,759,322
JBrowse link
G Slc7a1 solute carrier family 7 member 1 IMP
ISO
(MGI:MGI:66868|PMID:8385111), (MGI:MGI:67167|PMID:8195186) RGD PMID:8195186, PMID:8385111, PMID:17234578 MGI:MGI:66868, MGI:MGI:67167, RGD:1642930 NCBI chr12:8,032,775...8,108,972
Ensembl chr12:8,032,809...8,108,972
JBrowse link
G Slc7a2 solute carrier family 7 member 2 IDA RGD PMID:8626679, PMID:16998217, PMID:11329533 RGD:1642931, RGD:1642934, RGD:1642932 NCBI chr16:54,459,409...54,513,349
Ensembl chr16:54,460,067...54,513,349
JBrowse link
G Slc7a3 solute carrier family 7 member 3 IDA
ISO
IMP
(MGI:MGI:1098061|PMID:9334265) RGD PMID:9334265, PMID:9079705, PMID:17234578 MGI:MGI:1098061, RGD:68219, RGD:1642930 NCBI chr  X:70,972,767...70,979,466
Ensembl chr  X:70,972,765...70,978,952
JBrowse link
basic amino acid transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a1 solute carrier family 7 member 1 ISO (PMID:17197568) RGD PMID:17197568 NCBI chr12:8,032,775...8,108,972
Ensembl chr12:8,032,809...8,108,972
JBrowse link
G Slc7a6 solute carrier family 7 member 6 ISO (PMID:17197568) RGD PMID:17197568 NCBI chr19:38,152,225...38,179,149
Ensembl chr19:38,162,515...38,179,149
JBrowse link
G Slc7a7 solute carrier family 7 member 7 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:33,013,346...33,059,733
Ensembl chr15:33,013,504...33,051,129
JBrowse link
histidine transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:9092568, PMID:21873635 RGD:1299463, RGD:13792537 NCBI chr12:32,753,824...32,773,277
Ensembl chr12:32,753,824...32,773,277
JBrowse link
G Slc38a3 solute carrier family 38, member 3 ISO
IBA
IDA
(MGI:MGI:2138068|PMID:10716701)
PMID:21873635
(PMID:10823827)
PMID:10619430
RGD PMID:10716701, PMID:10823827, PMID:21873635, PMID:10619430 MGI:MGI:2138068, RGD:13792537, RGD:634178 NCBI chr 8:116,406,258...116,423,752
Ensembl chr 8:116,406,241...116,422,366
JBrowse link
L-arginine import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC292543 similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:64,618,347...64,632,132
Ensembl chr 1:64,618,506...64,632,131
JBrowse link
G Slc22a2 solute carrier family 22 member 2 ISO
IEA
(PMID:23864433)
GO_REF:0000107
RGD
Ensembl
PMID:23864433 GO_REF:0000107 NCBI chr 1:48,318,025...48,360,219
Ensembl chr 1:48,317,995...48,360,261
JBrowse link
G Slc47a1 solute carrier family 47 member 1 ISO (PMID:23864433) RGD PMID:23864433 NCBI chr10:47,631,425...47,685,379
Ensembl chr10:47,632,192...47,666,921
JBrowse link
G Slc7a1 solute carrier family 7 member 1 IBA
IMP
PMID:21873635
PMID:19712052
GO_Central
ARUK-UCL
PMID:21873635, PMID:19712052 RGD:13792537, RGD:30309907 NCBI chr12:8,032,775...8,108,972
Ensembl chr12:8,032,809...8,108,972
JBrowse link
G Slc7a2 solute carrier family 7 member 2 ISO
IBA
(MGI:MGI:66868|PMID:8385111), (MGI:MGI:67167|PMID:8195186)
(PMID:23864433)
PMID:21873635
RGD PMID:8195186, PMID:8385111, PMID:23864433, PMID:21873635 MGI:MGI:66868, MGI:MGI:67167, RGD:13792537 NCBI chr16:54,459,409...54,513,349
Ensembl chr16:54,460,067...54,513,349
JBrowse link
G Slc7a3 solute carrier family 7 member 3 IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:11591158)
Ensembl
RGD
PMID:11591158, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr  X:70,972,767...70,979,466
Ensembl chr  X:70,972,765...70,978,952
JBrowse link
L-arginine transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a29 solute carrier family 25 member 29 ISO
ISS
(PMID:24652292)
GO_REF:0000024
RGD
UniProt
PMID:24652292 GO_REF:0000024 NCBI chr 6:132,736,964...132,747,912
Ensembl chr 6:132,735,883...132,747,828
JBrowse link
G Slc38a9 solute carrier family 38, member 9 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:44,512,556...44,592,793
Ensembl chr 2:44,512,895...44,592,053
JBrowse link
L-arginine transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc11a1 solute carrier family 11 member 1 ISO
IEA
(MGI:MGI:74058|PMID:8529105)
GO_REF:0000107
RGD
Ensembl
PMID:8529105 GO_REF:0000107, MGI:MGI:74058 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706
JBrowse link
G Slc7a2 solute carrier family 7 member 2 ISO MGI:MGI:2150359 (MGI:MGI:1934545|PMID:11278602), (MGI:MGI:2656016|PMID:12675924) RGD PMID:11278602, PMID:12675924 MGI:MGI:1934545, MGI:MGI:2656016 NCBI chr16:54,459,409...54,513,349
Ensembl chr16:54,460,067...54,513,349
JBrowse link
L-histidine transmembrane export from vacuole term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 IEA
ISO
GO_REF:0000107
(MGI:MGI:5897714|PMID:27845049)
Ensembl
RGD
PMID:27845049 GO_REF:0000107, MGI:MGI:5897714 NCBI chr12:32,753,824...32,773,277
Ensembl chr12:32,753,824...32,773,277
JBrowse link
lysine transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc66a1 solute carrier family 66 member 1 ISO (PMID:22822152) RGD PMID:22822152 NCBI chr 5:157,744,945...157,759,370
Ensembl chr 5:157,745,490...157,759,322
JBrowse link
G Slc7a1 solute carrier family 7 member 1 ISO
IEA
(PMID:11891586)
GO_REF:0000107
RGD
Ensembl
PMID:11891586 GO_REF:0000107 NCBI chr12:8,032,775...8,108,972
Ensembl chr12:8,032,809...8,108,972
JBrowse link
G Slc7a3 solute carrier family 7 member 3 IDA RGD PMID:9079705 RGD:68219 NCBI chr  X:70,972,767...70,979,466
Ensembl chr  X:70,972,765...70,978,952
JBrowse link
positive regulation of L-arginine import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:7499219 RGD:11039060 NCBI chr19:57,321,594...57,333,460
Ensembl chr19:57,321,640...57,333,433
JBrowse link
regulation of L-arginine import term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 IDA RGD PMID:11120661 RGD:4144049 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Arg2 arginase 2 IDA RGD PMID:11120661 RGD:4144049 NCBI chr 6:102,311,097...102,338,406
Ensembl chr 6:102,311,116...102,338,520
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    localization 6478
      establishment of localization 4887
        transport 4735
          nitrogen compound transport 2123
            amino acid transport 175
              basic amino acid transport 18
                arginine transport + 14
                basic amino acid transmembrane transport + 13
                histidine transport + 2
                lysine transport + 3
Path 2
Term Annotations click to browse term
  biological_process 20028
    localization 6478
      establishment of localization 4887
        transport 4735
          ion transport 1786
            anion transport 679
              organic anion transport 535
                carboxylic acid transport 369
                  amino acid transport 175
                    basic amino acid transport 18
                      arginine transport + 14
                      basic amino acid transmembrane transport + 13
                      histidine transport + 2
                      lysine transport + 3
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.