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ONTOLOGY REPORT - ANNOTATIONS


Term:basic amino acid transport
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Accession:GO:0015802 term browser browse the term
Definition:The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


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basic amino acid transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a1 solute carrier family 7 member 1 TAS RGD PMID:8939918 RGD:730128 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849
JBrowse link
arginine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc66a1 solute carrier family 66 member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:151,537,870...151,552,338
Ensembl chr 5:151,542,376...151,552,259
JBrowse link
G Slc7a1 solute carrier family 7 member 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:26449889)
Ensembl
RGD
PMID:26449889 GO_REF:0000107 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849
JBrowse link
arginine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:16251196)
UniProt
RGD
PMID:16251196 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Slc66a1 solute carrier family 66 member 1 involved_in ISO (PMID:22822152) RGD PMID:22822152 NCBI chr 5:151,537,870...151,552,338
Ensembl chr 5:151,542,376...151,552,259
JBrowse link
G Slc7a1 solute carrier family 7 member 1 acts_upstream_of_or_within IMP
ISO
(MGI:66868|PMID:8385111), (MGI:67167|PMID:8195186) RGD PMID:8195186 PMID:8385111 PMID:17234578 MGI:66868 MGI:67167, RGD:1642930 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849
JBrowse link
G Slc7a2 solute carrier family 7 member 2 IDA RGD PMID:8626679 PMID:16998217 PMID:11329533 RGD:1642931, RGD:1642934, RGD:1642932 NCBI chr16:51,417,478...51,470,784
Ensembl chr16:51,417,493...51,470,784
JBrowse link
G Slc7a3 solute carrier family 7 member 3 acts_upstream_of_or_within IDA
ISO
IMP
(MGI:1098061|PMID:9334265) RGD PMID:9334265 PMID:9079705 PMID:17234578 MGI:1098061, RGD:68219, RGD:1642930 NCBI chr  X:66,210,071...66,216,482
Ensembl chr  X:66,210,081...66,215,708
JBrowse link
basic amino acid transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a1 solute carrier family 7 member 1 involved_in ISO (PMID:17197568) RGD PMID:17197568 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849
JBrowse link
G Slc7a6 solute carrier family 7 member 6 involved_in ISO (PMID:17197568) RGD PMID:17197568 NCBI chr19:34,073,472...34,100,268
Ensembl chr19:34,074,286...34,100,268
JBrowse link
G Slc7a7 solute carrier family 7 member 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:27,822,088...27,873,121
Ensembl chr15:27,822,091...27,865,648
JBrowse link
histidine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:9092568 PMID:21873635 RGD:1299463, RGD:13792537 NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
JBrowse link
G Slc38a3 solute carrier family 38, member 3 involved_in
acts_upstream_of_or_within
ISO
IDA
IBA
(PMID:10823827)
(MGI:2138068|PMID:10716701)
PMID:10619430
PMID:21873635
RGD PMID:10716701 PMID:10823827 PMID:10619430 PMID:21873635 MGI:2138068, RGD:634178, RGD:13792537 NCBI chr 8:108,323,889...108,339,959
Ensembl chr 8:108,323,894...108,339,988
JBrowse link
L-arginine import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC292543 similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:66,053,135...66,067,042
Ensembl chr 1:66,053,268...66,067,039
JBrowse link
G Slc22a2 solute carrier family 22 member 2 involved_in ISO
IEA
(PMID:23864433)
GO_REF:0000107
RGD
Ensembl
PMID:23864433 GO_REF:0000107 NCBI chr 1:48,121,061...48,163,268
Ensembl chr 1:48,121,061...48,163,268
JBrowse link
G Slc47a1 solute carrier family 47 member 1 involved_in ISO (PMID:23864433) RGD PMID:23864433 NCBI chr10:46,034,115...46,088,617
Ensembl chr10:46,034,122...46,087,637
JBrowse link
G Slc7a1 solute carrier family 7 member 1 involved_in IMP
IBA
PMID:19712052
PMID:21873635
ARUK-UCL
GO_Central
PMID:19712052 PMID:21873635 RGD:30309907, RGD:13792537 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849
JBrowse link
G Slc7a2 solute carrier family 7 member 2 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:23864433)
(MGI:67167|PMID:8195186)
(MGI:66868|PMID:8385111), (MGI:67167|PMID:8195186)
PMID:21873635
RGD PMID:8195186 PMID:8385111 PMID:23864433 PMID:21873635 MGI:66868 MGI:67167, RGD:13792537 NCBI chr16:51,417,478...51,470,784
Ensembl chr16:51,417,493...51,470,784
JBrowse link
G Slc7a3 solute carrier family 7 member 3 involved_in IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:11591158)
Ensembl
RGD
PMID:11591158 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr  X:66,210,071...66,216,482
Ensembl chr  X:66,210,081...66,215,708
JBrowse link
L-arginine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a29 solute carrier family 25 member 29 involved_in ISO
ISS
(PMID:24652292)
GO_REF:0000024
RGD
UniProt
PMID:24652292 GO_REF:0000024 NCBI chr 6:127,742,027...127,752,915
Ensembl chr 6:127,742,033...127,752,940
JBrowse link
G Slc38a9 solute carrier family 38, member 9 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:44,291,637...44,374,897
Ensembl chr 2:44,291,989...44,368,955
JBrowse link
L-arginine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:74058|PMID:8529105)
Ensembl
RGD
PMID:8529105 GO_REF:0000107 MGI:74058 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101
JBrowse link
G Slc7a2 solute carrier family 7 member 2 acts_upstream_of_or_within ISO MGI:2150359 (MGI:1934545|PMID:11278602), (MGI:2656016|PMID:12675924) RGD PMID:11278602 PMID:12675924 MGI:1934545 MGI:2656016 NCBI chr16:51,417,478...51,470,784
Ensembl chr16:51,417,493...51,470,784
JBrowse link
L-histidine transmembrane export from vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:5897714|PMID:27845049)
Ensembl
RGD
PMID:27845049 GO_REF:0000107 MGI:5897714 NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
JBrowse link
lysine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc66a1 solute carrier family 66 member 1 involved_in ISO (PMID:22822152) RGD PMID:22822152 NCBI chr 5:151,537,870...151,552,338
Ensembl chr 5:151,542,376...151,552,259
JBrowse link
G Slc7a1 solute carrier family 7 member 1 involved_in ISO
IEA
(PMID:11891586)
GO_REF:0000107
RGD
Ensembl
PMID:11891586 GO_REF:0000107 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849
JBrowse link
G Slc7a3 solute carrier family 7 member 3 IDA RGD PMID:9079705 RGD:68219 NCBI chr  X:66,210,071...66,216,482
Ensembl chr  X:66,210,081...66,215,708
JBrowse link
positive regulation of L-arginine import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:7499219 RGD:11039060 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
regulation of L-arginine import term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 IDA RGD PMID:11120661 RGD:4144049 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422
JBrowse link
G Arg2 arginase 2 IDA RGD PMID:11120661 RGD:4144049 NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    localization 6447
      establishment of localization 4864
        transport 4700
          nitrogen compound transport 2049
            amino acid transport 174
              basic amino acid transport 18
                arginine transport + 14
                basic amino acid transmembrane transport + 13
                histidine transport + 2
                lysine transport + 3
Path 2
Term Annotations click to browse term
  biological_process 19492
    localization 6447
      establishment of localization 4864
        transport 4700
          organic substance transport 2479
            organic acid transport 346
              amino acid transport 174
                basic amino acid transport 18
                  arginine transport + 14
                  basic amino acid transmembrane transport + 13
                  histidine transport + 2
                  lysine transport + 3
paths to the root