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ONTOLOGY REPORT - ANNOTATIONS

Term:basic amino acid transport
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Accession:GO:0015802 term browser browse the term
Definition:The directed movement of basic amino acids, amino acids with a pH above 7, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.


show annotations for term's descendants           Sort by:
basic amino acid transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a1 solute carrier family 7 member 1 TAS RGD PMID:8939918 RGD:730128 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849 		JBrowse link
basic amino acid transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a1 solute carrier family 7 member 1 involved_in ISO (PMID:17197568) ARUK-UCL PMID:17197568 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849 		JBrowse link
G Slc7a3 solute carrier family 7 member 3 acts_upstream_of_or_within ISO (MGI:1098061|PMID:9334265) RGD PMID:9334265 MGI:1098061 NCBI chr  X:66,210,071...66,216,482
Ensembl chr  X:66,210,081...66,215,708 		JBrowse link
G Slc7a6 solute carrier family 7 member 6 involved_in ISO (PMID:17197568) ARUK-UCL PMID:17197568 NCBI chr19:34,073,472...34,100,268
Ensembl chr19:34,074,286...34,100,268 		JBrowse link
histidine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 involved_in IMP
IBA		 PMID:21873635 RGD
GO_Central		 PMID:9092568 PMID:21873635 RGD:1299463, RGD:13792537 NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480 		JBrowse link
G Slc38a3 solute carrier family 38, member 3 involved_in
acts_upstream_of_or_within		 IBA
ISO
IDA		 PMID:21873635
(PMID:10823827)
(MGI:2138068|PMID:10716701)
PMID:10619430		 RGD PMID:10716701 PMID:10823827 PMID:21873635 PMID:10619430 MGI:2138068, RGD:13792537, RGD:634178 NCBI chr 8:108,323,889...108,339,959
Ensembl chr 8:108,323,894...108,339,988 		JBrowse link
L-arginine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:16251196) RGD PMID:16251196 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434 		JBrowse link
G LOC292543 similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:66,053,135...66,067,042
Ensembl chr 1:66,053,268...66,067,039 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 acts_upstream_of_or_within ISO (MGI:74058|PMID:8529105) RGD PMID:8529105 MGI:74058 NCBI chr 9:75,957,193...75,968,115
Ensembl chr 9:75,957,316...75,968,101 		JBrowse link
G Slc22a2 solute carrier family 22 member 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:48,121,061...48,163,268
Ensembl chr 1:48,121,061...48,163,268 		JBrowse link
G Slc25a15 solute carrier family 25 member 15 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12807890)		 UniProt
RGD		 PMID:12807890 GO_REF:0000024 NCBI chr16:69,631,581...69,654,869
Ensembl chr16:69,634,414...69,653,010 		JBrowse link
G Slc25a2 solute carrier family 25 member 2 involved_in ISO (PMID:26403849) RGD PMID:26403849 NCBI chr18:29,452,943...29,457,906
Ensembl chr18:29,453,582...29,460,383 		JBrowse link
G Slc25a29 solute carrier family 25 member 29 involved_in ISO
ISS		 (PMID:24652292)
GO_REF:0000024		 RGD
UniProt		 PMID:24652292 GO_REF:0000024 NCBI chr 6:127,742,027...127,752,915
Ensembl chr 6:127,742,033...127,752,940 		JBrowse link
G Slc38a4 solute carrier family 38, member 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6709267|PMID:23451088)		 UniProt
RGD		 PMID:23451088 GO_REF:0000024 MGI:6709267 NCBI chr 7:128,142,866...128,203,000
Ensembl chr 7:128,144,807...128,202,995 		JBrowse link
G Slc38a9 solute carrier family 38, member 9 involved_in ISS
ISO		 GO_REF:0000024
(PMID:25567906)		 UniProt
RGD		 PMID:25567906 GO_REF:0000024 NCBI chr 2:44,291,637...44,374,897
Ensembl chr 2:44,291,989...44,368,955 		JBrowse link
G Slc47a1 solute carrier family 47 member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:46,034,115...46,088,617
Ensembl chr10:46,034,122...46,087,637 		JBrowse link
G Slc66a1 solute carrier family 66 member 1 involved_in ISO (PMID:22822152) RGD PMID:22822152 NCBI chr 5:151,537,870...151,552,338
Ensembl chr 5:151,542,376...151,552,259 		JBrowse link
G Slc7a1 solute carrier family 7 member 1 involved_in
acts_upstream_of_or_within		 IMP
ISO
IEA		 (PMID:26449889), (PMID:9174363)
(MGI:59821|PMID:1652100), (MGI:708000|PMID:9174363), (MGI:7310019|PMID:1908564)
(MGI:66868|PMID:8385111), (MGI:67167|PMID:8195186)
GO_REF:0000107		 RGD
Ensembl		 PMID:1652100 PMID:1908564 PMID:8195186 PMID:8385111 PMID:9174363 More... GO_REF:0000107 MGI:59821 MGI:66868 MGI:67167 MGI:708000 MGI:7310019, RGD:1642930 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849 		JBrowse link
G Slc7a2 solute carrier family 7 member 2 acts_upstream_of_or_within
involved_in		 IDA
ISO		 MGI:2150359 (MGI:1934545|PMID:11278602), (MGI:2656016|PMID:12675924)
(MGI:708000|PMID:9174363)
(PMID:9174363)		 RGD PMID:9174363 PMID:11278602 PMID:12675924 PMID:8626679 PMID:16998217 More... MGI:1934545 MGI:2656016 MGI:708000, RGD:1642931, RGD:1642934, RGD:1642932 NCBI chr16:51,417,478...51,470,784
Ensembl chr16:51,417,493...51,470,784 		JBrowse link
G Slc7a3 solute carrier family 7 member 3 involved_in
acts_upstream_of_or_within		 IDA
IEA
ISO
IMP		 GO_REF:0000107
(MGI:1098061|PMID:9334265)		 Ensembl
RGD		 PMID:9334265 PMID:9079705 PMID:17234578 GO_REF:0000107 MGI:1098061, RGD:68219, RGD:1642930 NCBI chr  X:66,210,071...66,216,482
Ensembl chr  X:66,210,081...66,215,708 		JBrowse link
G Slc7a6 solute carrier family 7 member 6 involved_in IMP
ISO		 PMID:26448619
(PMID:10903140), (PMID:11311135), (PMID:15756301), (PMID:16785209), (PMID:31705628)
PMID:22401943		 RGD PMID:10903140 PMID:11311135 PMID:15756301 PMID:16785209 PMID:31705628 More... RGD:11531816, RGD:155663518 NCBI chr19:34,073,472...34,100,268
Ensembl chr19:34,074,286...34,100,268 		JBrowse link
G Slc7a7 solute carrier family 7 member 7 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9829974)		 UniProt
RGD		 PMID:9829974 GO_REF:0000024 NCBI chr15:27,822,088...27,873,121
Ensembl chr15:27,822,091...27,865,648 		JBrowse link
L-histidine transmembrane export from vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5897714|PMID:27845049)		 Ensembl
RGD		 PMID:27845049 GO_REF:0000107 MGI:5897714 NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480 		JBrowse link
L-histidine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc38a3 solute carrier family 38, member 3 involved_in IDA PMID:11742981
PMID:28272791		 UniProt PMID:11742981 PMID:28272791 RGD:152995542, RGD:152995559 NCBI chr 8:108,323,889...108,339,959
Ensembl chr 8:108,323,894...108,339,988 		JBrowse link
G Slc3a2 solute carrier family 3 member 2 involved_in IEA
IDA
ISO		 GO_REF:0000107
PMID:10049700
(PMID:11557028), (PMID:9751058)		 Ensembl
RGD		 PMID:9751058 PMID:11557028 PMID:10049700 GO_REF:0000107, RGD:155230758 NCBI chr 1:205,604,468...205,618,931
Ensembl chr 1:205,604,468...205,618,931 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 involved_in ISO (PMID:10049700), (PMID:11557028), (PMID:9751058) RGD PMID:9751058 PMID:10049700 PMID:11557028 NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823 		JBrowse link
lysine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc66a1 solute carrier family 66 member 1 involved_in ISO (PMID:22822152) RGD PMID:22822152 NCBI chr 5:151,537,870...151,552,338
Ensembl chr 5:151,542,376...151,552,259 		JBrowse link
G Slc7a1 solute carrier family 7 member 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:11891586)		 Ensembl
RGD		 PMID:11891586 GO_REF:0000107 NCBI chr12:6,628,214...6,703,849
Ensembl chr12:6,628,007...6,703,849 		JBrowse link
G Slc7a3 solute carrier family 7 member 3 IDA RGD PMID:9079705 RGD:68219 NCBI chr  X:66,210,071...66,216,482
Ensembl chr  X:66,210,081...66,215,708 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19746
    localization 5598
      establishment of localization 4939
        transport 4766
          nitrogen compound transport 2143
            amino acid transport 174
              basic amino acid transport 20
                basic amino acid transmembrane transport + 17
                histidine transport + 4
                lysine transport + 3
Path 2
Term Annotations click to browse term
  biological_process 19746
    localization 5598
      establishment of localization 4939
        transport 4766
          organic substance transport 2913
            organic anion transport 475
              carboxylic acid transport 386
                amino acid transport 174
                  basic amino acid transport 20
                    basic amino acid transmembrane transport + 17
                    histidine transport + 4
                    lysine transport + 3
paths to the root