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ONTOLOGY REPORT - ANNOTATIONS


Term:C4-dicarboxylate transport
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Accession:GO:0015740 term browser browse the term
Definition:The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.


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aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrc8a leucine rich repeat containing 8 VRAC subunit A ISO PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chrNW_004936487:16,360,672...16,387,860 JBrowse link
G Lrrc8c leucine rich repeat containing 8 VRAC subunit C ISO PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chrNW_004936537:9,050,495...9,124,649 JBrowse link
G Lrrc8d leucine rich repeat containing 8 VRAC subunit D ISO PMID:28833202
(PMID:28193731)
UniProt
UniProtKB
PMID:28193731, PMID:28833202 RGD:13673739 NCBI chrNW_004936537:8,850,411...8,963,601 JBrowse link
G Lrrc8e leucine rich repeat containing 8 VRAC subunit E ISO (PMID:28193731) UniProtKB PMID:28193731 NCBI chrNW_004936588:4,873,412...4,880,574 JBrowse link
G Slc13a3 solute carrier family 13 member 3 ISO RGD PMID:10992006, PMID:15836629 RGD:2303955, RGD:2303956 NCBI chrNW_004936514:6,554,605...6,594,014 JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO (PMID:11566871) UniProtKB PMID:11566871 NCBI chrNW_004936509:1,994,082...2,077,731 JBrowse link
G Slc25a13 solute carrier family 25 member 13 ISO (PMID:11566871)
(MGI:3027207|PMID:14701727)
UniProtKB
MGI
PMID:11566871, PMID:14701727 MGI:3027207 NCBI chrNW_004936585:4,061,297...4,215,912 JBrowse link
D-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfap glial fibrillary acidic protein ISO (MGI:3046158|PMID:15135219) MGI PMID:15135219 MGI:3046158 NCBI chrNW_004936541:1,265,915...1,275,232 JBrowse link
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:12123836 RGD:1566569 NCBI chrNW_004936514:10,240,990...10,272,859 JBrowse link
G Prkcd protein kinase C delta ISO RGD PMID:17364745 RGD:1642541 NCBI chrNW_004936473:3,892,625...3,923,467 JBrowse link
G Slc1a1 solute carrier family 1 member 1 ISO (PMID:8857541)
(PMID:7521911)
UniProtKB PMID:7521911, PMID:8857541 NCBI chrNW_004936503:613,250...690,555 JBrowse link
G Slc1a2 solute carrier family 1 member 2 ISO (PMID:7521911) UniProtKB PMID:7521911 NCBI chrNW_004936533:2,779,650...2,918,640 JBrowse link
G Slc1a3 solute carrier family 1 member 3 ISO (PMID:7521911)
(MGI:5897520|PMID:28032905)
(PMID:28032905), (PMID:8123008)
UniProtKB
UniProt
PMID:7521911, PMID:8123008, PMID:28032905 MGI:5897520 NCBI chrNW_004936518:5,216,343...5,291,107 JBrowse link
D-aspartate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a1 solute carrier family 1 member 1 ISO (PMID:7914198) ARUK-UCL PMID:7914198 NCBI chrNW_004936503:613,250...690,555 JBrowse link
L-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a1 solute carrier family 1 member 1 ISO (PMID:8857541) UniProtKB PMID:8857541 NCBI chrNW_004936503:613,250...690,555 JBrowse link
G Slc1a3 solute carrier family 1 member 3 ISO PMID:1279699
(PMID:8123008)
(PMID:20477940)
UniProt
UniProtKB
PMID:1279699, PMID:8123008, PMID:20477940 RGD:70007 NCBI chrNW_004936518:5,216,343...5,291,107 JBrowse link
G Slc1a4 solute carrier family 1 member 4 ISO (MGI:6393124|PMID:14622120) ARUK-UCL PMID:14622120 MGI:6393124 NCBI chrNW_004936491:9,761,002...9,790,535 JBrowse link
G Slc1a5 solute carrier family 1 member 5 ISO PMID:14622120
(MGI:6393124|PMID:14622120)
ARUK-UCL PMID:14622120 MGI:6393124, RGD:21201277 NCBI chrNW_004936664:599,012...610,689 JBrowse link
L-aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a1 solute carrier family 1 member 1 ISO (PMID:7914198) ARUK-UCL PMID:7914198 NCBI chrNW_004936503:613,250...690,555 JBrowse link
malate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 ISO RGD PMID:9733776 RGD:634162 NCBI chrNW_004936594:5,308,623...5,314,955 JBrowse link
positive regulation of aspartate secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase ISO RGD PMID:2342602 RGD:10054058 NCBI chrNW_004936530:7,543,743...7,621,392 JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:6392919|PMID:11940530) ARUK-UCL PMID:11940530 MGI:6392919 NCBI chrNW_004936504:1,378,812...1,465,463 JBrowse link
succinate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc13a2 solute carrier family 13 member 2 ISO (PMID:26176240)
(MGI:6436400|PMID:26176240)
ARUK-UCL PMID:26176240 MGI:6436400 NCBI chrNW_004936538:4,685,538...4,708,049 JBrowse link
G Slc13a3 solute carrier family 13 member 3 ISO PMID:9920886
(MGI:6436400|PMID:26176240)
(PMID:10992006), (PMID:21264516), (PMID:24247155), (PMID:26176240)
ARUK-UCL PMID:9920886, PMID:10992006, PMID:21264516, PMID:24247155, PMID:26176240 MGI:6436400, RGD:634021 NCBI chrNW_004936514:6,554,605...6,594,014 JBrowse link
succinate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc13a3 solute carrier family 13 member 3 ISO RGD PMID:10992006, PMID:12177002, PMID:15836629, PMID:16524379 RGD:2303797, RGD:2303955, RGD:2303956, RGD:633417 NCBI chrNW_004936514:6,554,605...6,594,014 JBrowse link
G Slc13a5 solute carrier family 13 member 5 ISO (MGI:3033559|PMID:14656221) RGD
MGI
PMID:12177002, PMID:14656221, PMID:16524379 MGI:3033559, RGD:2303797, RGD:633417 NCBI chrNW_004936677:1,288,637...1,316,884 JBrowse link
G Slc25a10 solute carrier family 25 member 10 ISO RGD PMID:9733776 RGD:634162 NCBI chrNW_004936594:5,308,623...5,314,955 JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 12003
    localization 4766
      establishment of localization 3410
        transport 3258
          ion transport 2326
            anion transport 1771
              organic substance transport 1695
                organic anion transport 270
                  carboxylic acid transport 229
                    dicarboxylic acid transport 83
                      C4-dicarboxylate transport 20
                        D-aspartate transport + 6
                        L-aspartate transmembrane transport + 4
                        aspartate secretion + 2
                        aspartate transmembrane import into vacuole 0
                        aspartate transmembrane transport 7
                        fumarate transport 0
                        malate transport + 1
                        oxaloacetate transport + 0
                        succinate transport + 4
                        tartrate transmembrane transport 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.