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ONTOLOGY REPORT - ANNOTATIONS


Term:C4-dicarboxylate transport
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Accession:GO:0015740 term browser browse the term
Definition:The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.


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aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100911440 mitochondrial glutamate carrier 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,973,482...213,979,016
Ensembl chr 1:214,410,417...214,414,897
Ensembl chr 1:214,410,417...214,414,897
JBrowse link
G Lrrc8a leucine rich repeat containing 8 VRAC subunit A IMP PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr 3:8,801,544...8,829,506
Ensembl chr 3:8,802,852...8,828,533
JBrowse link
G Lrrc8c leucine rich repeat containing 8 VRAC subunit C IMP PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr14:5,283,655...5,378,738
Ensembl chr14:5,283,647...5,378,726
JBrowse link
G Lrrc8d leucine rich repeat containing 8 VRAC subunit D ISS
ISO
IMP
IEA
GO_REF:0000024
(PMID:28193731)
PMID:28833202
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28193731, PMID:28833202 GO_REF:0000024, GO_REF:0000107, RGD:13673739 NCBI chr14:5,085,606...5,194,808
Ensembl chr14:5,086,054...5,101,177
JBrowse link
G Lrrc8e leucine rich repeat containing 8 VRAC subunit E ISS
ISO
GO_REF:0000024
(PMID:28193731)
UniProt
RGD
PMID:28193731 GO_REF:0000024 NCBI chr12:2,557,267...2,568,416
Ensembl chr12:2,557,275...2,568,382
JBrowse link
G Slc13a3 solute carrier family 13 member 3 IDA RGD PMID:10992006, PMID:15836629 RGD:2303955, RGD:2303956 NCBI chr 3:162,084,336...162,147,398
Ensembl chr 3:162,084,315...162,147,393
JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO
IBA
(PMID:11566871)
PMID:21873635
RGD PMID:11566871, PMID:21873635 RGD:13792537 NCBI chr 3:57,881,951...57,998,214
Ensembl chr 3:57,882,370...57,957,346
JBrowse link
G Slc25a13 solute carrier family 25 member 13 ISO
IBA
(PMID:11566871)
MGI:3028639 (MGI:3027207|PMID:14701727)
PMID:21873635
RGD PMID:11566871, PMID:14701727, PMID:21873635 MGI:3027207, RGD:13792537 NCBI chr 4:31,134,165...31,757,006
Ensembl chr 4:31,608,269...31,730,386
JBrowse link
G Slc25a18 solute carrier family 25 member 18 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:153,330,069...153,350,447
Ensembl chr 4:153,330,069...153,350,446
JBrowse link
G Slc25a22 solute carrier family 25 member 22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:214,410,388...214,418,236
Ensembl chr 1:214,410,417...214,414,897
JBrowse link
D-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfap glial fibrillary acidic protein ISO MGI:1857176 (MGI:3046158|PMID:15135219) RGD PMID:15135219 MGI:3046158 NCBI chr10:90,990,762...90,999,435
Ensembl chr10:90,990,762...90,999,506
JBrowse link
G Ntsr1 neurotensin receptor 1 IDA RGD PMID:12123836 RGD:1566569 NCBI chr 3:175,982,313...176,046,345
Ensembl chr 3:175,885,894...176,046,345
JBrowse link
G Prkcd protein kinase C, delta IMP RGD PMID:17364745 RGD:1642541 NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
JBrowse link
G Slc1a1 solute carrier family 1 member 1 ISO (PMID:7521911), (PMID:8857541) RGD PMID:7521911, PMID:8857541 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056
JBrowse link
G Slc1a2 solute carrier family 1 member 2 ISO (PMID:7521911) RGD PMID:7521911 NCBI chr 3:92,518,679...92,665,731
Ensembl chr 3:92,640,752...92,665,644
JBrowse link
G Slc1a3 solute carrier family 1 member 3 ISS
ISO
IEA
GO_REF:0000024
(MGI:5897520|PMID:28032905)
(PMID:28032905), (PMID:7521911), (PMID:8123008)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:7521911, PMID:8123008, PMID:28032905 GO_REF:0000024, GO_REF:0000107, MGI:5897520 NCBI chr 2:57,860,881...57,935,363
Ensembl chr 2:57,860,834...57,935,363
JBrowse link
D-aspartate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a1 solute carrier family 1 member 1 ISO (PMID:7914198) RGD PMID:7914198 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056
JBrowse link
L-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a1 solute carrier family 1 member 1 ISO
ISS
(PMID:8857541)
GO_REF:0000024
RGD
UniProt
PMID:8857541 GO_REF:0000024 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056
JBrowse link
G Slc1a3 solute carrier family 1 member 3 IMP
ISO
ISS
IEA
PMID:1279699
(PMID:20477940), (PMID:8123008)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:8123008, PMID:20477940, PMID:1279699 GO_REF:0000024, GO_REF:0000107, RGD:70007 NCBI chr 2:57,860,881...57,935,363
Ensembl chr 2:57,860,834...57,935,363
JBrowse link
G Slc1a4 solute carrier family 1 member 4 ISO (MGI:6393124|PMID:14622120) RGD PMID:14622120 MGI:6393124 NCBI chr14:104,582,884...104,612,417
Ensembl chr14:104,581,190...104,612,597
JBrowse link
G Slc1a5 solute carrier family 1 member 5 IDA
ISO
PMID:14622120
(MGI:6393124|PMID:14622120)
RGD PMID:14622120, PMID:14622120 MGI:6393124, RGD:21201277 NCBI chr 1:78,710,686...78,724,789
Ensembl chr 1:78,710,539...78,724,794
JBrowse link
L-aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100911440 mitochondrial glutamate carrier 1-like IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:213,973,482...213,979,016
Ensembl chr 1:214,410,417...214,414,897
Ensembl chr 1:214,410,417...214,414,897
JBrowse link
G Slc13a3 solute carrier family 13 member 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:162,084,336...162,147,398
Ensembl chr 3:162,084,315...162,147,393
JBrowse link
G Slc1a1 solute carrier family 1 member 1 ISO (PMID:7914198) RGD PMID:7914198 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056
JBrowse link
G Slc25a12 solute carrier family 25 member 12 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:57,881,951...57,998,214
Ensembl chr 3:57,882,370...57,957,346
JBrowse link
G Slc25a13 solute carrier family 25 member 13 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:31,134,165...31,757,006
Ensembl chr 4:31,608,269...31,730,386
JBrowse link
G Slc25a18 solute carrier family 25 member 18 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:153,330,069...153,350,447
Ensembl chr 4:153,330,069...153,350,446
JBrowse link
G Slc25a22 solute carrier family 25 member 22 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:214,410,388...214,418,236
Ensembl chr 1:214,410,417...214,414,897
JBrowse link
G Slc38a7 solute carrier family 38, member 7 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:9,622,594...9,638,221
Ensembl chr19:9,622,611...9,638,222
JBrowse link
malate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link
G Slc25a11 solute carrier family 25 member 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,265,903...57,268,018
Ensembl chr10:57,265,704...57,268,081
JBrowse link
G Slc25a14 solute carrier family 25 member 14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:135,470,855...135,509,223
Ensembl chr  X:135,470,915...135,509,221
JBrowse link
G Slc25a30 solute carrier family 25, member 30 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:57,811,612...57,834,173
Ensembl chr15:57,813,356...57,834,173
JBrowse link
malate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 IDA RGD PMID:9733776 RGD:634162 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link
oxaloacetate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link
G Slc25a11 solute carrier family 25 member 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,265,903...57,268,018
Ensembl chr10:57,265,704...57,268,081
JBrowse link
G Slc25a14 solute carrier family 25 member 14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:135,470,855...135,509,223
Ensembl chr  X:135,470,915...135,509,221
JBrowse link
G Slc25a30 solute carrier family 25, member 30 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:57,811,612...57,834,173
Ensembl chr15:57,813,356...57,834,173
JBrowse link
oxaloacetate(2-) transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link
G Slc25a11 solute carrier family 25 member 11 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:57,265,903...57,268,018
Ensembl chr10:57,265,704...57,268,081
JBrowse link
G Slc25a14 solute carrier family 25 member 14 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:135,470,855...135,509,223
Ensembl chr  X:135,470,915...135,509,221
JBrowse link
G Slc25a30 solute carrier family 25, member 30 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:57,811,612...57,834,173
Ensembl chr15:57,813,356...57,834,173
JBrowse link
positive regulation of aspartate secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:2342602 RGD:10054058 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:6392919|PMID:11940530) RGD PMID:11940530 MGI:6392919 NCBI chr18:52,917,124...52,985,281
Ensembl chr18:52,917,124...52,985,261
JBrowse link
succinate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc13a2 solute carrier family 13 member 2 ISO
IEA
(PMID:26176240)
(MGI:6436400|PMID:26176240)
GO_REF:0000107
RGD
Ensembl
PMID:26176240 GO_REF:0000107, MGI:6436400 NCBI chr10:65,664,665...65,692,046
Ensembl chr10:65,664,667...65,692,023
JBrowse link
G Slc13a3 solute carrier family 13 member 3 IDA
ISO
IEA
PMID:9920886
(MGI:6436400|PMID:26176240)
GO_REF:0000107
(PMID:10992006), (PMID:21264516), (PMID:24247155), (PMID:26176240)
RGD
Ensembl
PMID:10992006, PMID:21264516, PMID:24247155, PMID:26176240, PMID:9920886 GO_REF:0000107, MGI:6436400, RGD:634021 NCBI chr 3:162,084,336...162,147,398
Ensembl chr 3:162,084,315...162,147,393
JBrowse link
G Slc13a5 solute carrier family 13 member 5 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:58,806,581...58,835,549
Ensembl chr10:58,810,058...58,834,538
JBrowse link
G Slc25a10 solute carrier family 25 member 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link
G Slc25a11 solute carrier family 25 member 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,265,903...57,268,018
Ensembl chr10:57,265,704...57,268,081
JBrowse link
G Slc25a14 solute carrier family 25 member 14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:135,470,855...135,509,223
Ensembl chr  X:135,470,915...135,509,221
JBrowse link
G Slc25a30 solute carrier family 25, member 30 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:57,811,612...57,834,173
Ensembl chr15:57,813,356...57,834,173
JBrowse link
succinate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc13a3 solute carrier family 13 member 3 IDA RGD PMID:12177002, PMID:15836629, PMID:10992006, PMID:16524379 RGD:633417, RGD:2303956, RGD:2303955, RGD:2303797 NCBI chr 3:162,084,336...162,147,398
Ensembl chr 3:162,084,315...162,147,393
JBrowse link
G Slc13a5 solute carrier family 13 member 5 IDA
ISO
(MGI:3033559|PMID:14656221) RGD PMID:14656221, PMID:16524379, PMID:12177002 MGI:3033559, RGD:2303797, RGD:633417 NCBI chr10:58,806,581...58,835,549
Ensembl chr10:58,810,058...58,834,538
JBrowse link
G Slc25a10 solute carrier family 25 member 10 IDA RGD PMID:9733776 RGD:634162 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    localization 6478
      establishment of localization 4886
        transport 4734
          ion transport 3500
            anion transport 2681
              organic substance transport 2558
                organic anion transport 384
                  carboxylic acid transport 299
                    dicarboxylic acid transport 99
                      C4-dicarboxylate transport 27
                        D-aspartate transport + 6
                        L-aspartate transmembrane transport + 11
                        aspartate secretion + 2
                        aspartate transmembrane import into vacuole 0
                        aspartate transmembrane transport 10
                        fumarate transport 0
                        malate transport + 4
                        oxaloacetate transport + 4
                        succinate transport + 7
                        tartrate transmembrane transport 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.