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ONTOLOGY REPORT - ANNOTATIONS


Term:C4-dicarboxylate transport
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Accession:GO:0015740 term browser browse the term
Definition:The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.


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aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRC8A leucine rich repeat containing 8 VRAC subunit A ISO PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr 1:269,209,660...269,238,529
Ensembl chr 1:269,209,671...269,238,526
JBrowse link
G LRRC8C leucine rich repeat containing 8 VRAC subunit C ISO PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr 4:126,957,099...127,079,042
Ensembl chr 4:126,931,849...127,079,843
JBrowse link
G LRRC8D leucine rich repeat containing 8 VRAC subunit D IEA Ensembl GO_REF:0000107 NCBI chr 4:126,751,720...126,883,344
Ensembl chr 4:126,766,211...126,874,275
JBrowse link
G LRRC8E leucine rich repeat containing 8 VRAC subunit E IEA Ensembl GO_REF:0000107 NCBI chr 2:71,309,404...71,318,225
Ensembl chr 2:71,309,402...71,329,422
JBrowse link
G SLC13A3 solute carrier family 13 member 3 ISO RGD PMID:10992006, PMID:15836629 RGD:2303955, RGD:2303956 NCBI chr17:48,714,180...48,792,280
Ensembl chr17:48,714,183...48,815,123
JBrowse link
G SLC25A12 solute carrier family 25 member 12 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr15:77,895,935...78,021,930
Ensembl chr15:77,895,935...78,098,383
JBrowse link
G SLC25A13 solute carrier family 25 member 13 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 9:75,781,421...75,980,606
Ensembl chr 9:75,754,392...76,349,242
JBrowse link
G SLC25A22 solute carrier family 25 member 22 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:491,288...498,773
Ensembl chr 2:491,299...498,769
JBrowse link
D-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFAP glial fibrillary acidic protein ISO (MGI:3046158|PMID:15135219) MGI PMID:15135219 MGI:3046158 NCBI chr12:18,456,268...18,466,594
Ensembl chr12:18,456,263...18,468,898
JBrowse link
G NTSR1 neurotensin receptor 1 ISO RGD PMID:12123836 RGD:1566569 NCBI chr17:61,989,601...62,038,299
Ensembl chr17:61,989,112...62,035,345
JBrowse link
G PRKCD protein kinase C delta ISO RGD PMID:17364745 RGD:1642541 NCBI chr13:35,290,835...35,323,245
Ensembl chr13:35,290,264...35,323,356
JBrowse link
G SLC1A1 solute carrier family 1 member 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:217,366,493...217,441,643
Ensembl chr 1:217,366,499...217,441,674
JBrowse link
G SLC1A2 solute carrier family 1 member 2 IEA Ensembl GO_REF:0000107 NCBI chr 2:25,603,892...25,771,840
Ensembl chr 2:25,604,950...25,848,276
JBrowse link
G SLC1A3 solute carrier family 1 member 3 IEA Ensembl GO_REF:0000107 NCBI chr16:21,873,691...21,965,315
Ensembl chr16:21,873,691...21,968,671
JBrowse link
D-aspartate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC1A1 solute carrier family 1 member 1 ISO (PMID:7914198) ARUK-UCL PMID:7914198 NCBI chr 1:217,366,493...217,441,643
Ensembl chr 1:217,366,499...217,441,674
JBrowse link
L-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC1A1 solute carrier family 1 member 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:217,366,493...217,441,643
Ensembl chr 1:217,366,499...217,441,674
JBrowse link
G SLC1A3 solute carrier family 1 member 3 IEA Ensembl GO_REF:0000107 NCBI chr16:21,873,691...21,965,315
Ensembl chr16:21,873,691...21,968,671
JBrowse link
G SLC1A4 solute carrier family 1 member 4 IEA Ensembl GO_REF:0000107 NCBI chr 3:76,938,102...76,970,519
Ensembl chr 3:76,938,105...76,970,508
JBrowse link
G SLC1A5 solute carrier family 1 member 5 ISO PMID:14622120
(MGI:6393124|PMID:14622120)
ARUK-UCL PMID:14622120 MGI:6393124, RGD:21201277 NCBI chr 6:52,647,432...52,661,464
Ensembl chr 6:52,647,432...52,661,459
JBrowse link
L-aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC1A1 solute carrier family 1 member 1 ISO (PMID:7914198) ARUK-UCL PMID:7914198 NCBI chr 1:217,366,493...217,441,643
Ensembl chr 1:217,366,499...217,441,674
JBrowse link
G SLC25A12 solute carrier family 25 member 12 IEA GOC GO_REF:0000108 NCBI chr15:77,895,935...78,021,930
Ensembl chr15:77,895,935...78,098,383
JBrowse link
G SLC25A13 solute carrier family 25 member 13 IEA GOC GO_REF:0000108 NCBI chr 9:75,781,421...75,980,606
Ensembl chr 9:75,754,392...76,349,242
JBrowse link
G SLC25A22 solute carrier family 25 member 22 IEA GOC GO_REF:0000108 NCBI chr 2:491,288...498,773
Ensembl chr 2:491,299...498,769
JBrowse link
G SLC38A7 solute carrier family 38 member 7 IEA GOC GO_REF:0000108 NCBI chr 6:20,387,113...20,401,733
Ensembl chr 6:20,337,137...20,401,684
JBrowse link
malate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFN1 profilin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:51,962,642...51,965,570
Ensembl chr12:51,961,696...51,973,660
JBrowse link
G SLC25A10 solute carrier family 25 member 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:1,191,242...1,197,439 JBrowse link
G SLC25A11 solute carrier family 25 member 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:51,970,794...51,973,668
Ensembl chr12:51,970,805...51,975,548
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:106,828,695...106,859,128
Ensembl chr  X:106,828,731...106,859,126
JBrowse link
malate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC25A10 solute carrier family 25 member 10 ISO RGD PMID:9733776 RGD:634162 NCBI chr12:1,191,242...1,197,439 JBrowse link
oxaloacetate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFN1 profilin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:51,962,642...51,965,570
Ensembl chr12:51,961,696...51,973,660
JBrowse link
G SLC25A10 solute carrier family 25 member 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:1,191,242...1,197,439 JBrowse link
G SLC25A11 solute carrier family 25 member 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:51,970,794...51,973,668
Ensembl chr12:51,970,805...51,975,548
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:106,828,695...106,859,128
Ensembl chr  X:106,828,731...106,859,126
JBrowse link
oxaloacetate(2-) transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFN1 profilin 1 IEA GOC GO_REF:0000108 NCBI chr12:51,962,642...51,965,570
Ensembl chr12:51,961,696...51,973,660
JBrowse link
G SLC25A10 solute carrier family 25 member 10 IEA GOC GO_REF:0000108 NCBI chr12:1,191,242...1,197,439 JBrowse link
G SLC25A11 solute carrier family 25 member 11 IEA GOC GO_REF:0000108 NCBI chr12:51,970,794...51,973,668
Ensembl chr12:51,970,805...51,975,548
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IEA GOC GO_REF:0000108 NCBI chr  X:106,828,695...106,859,128
Ensembl chr  X:106,828,731...106,859,126
JBrowse link
positive regulation of aspartate secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO RGD PMID:2342602 RGD:10054058 NCBI chr 3:33,913,068...33,960,804
Ensembl chr 3:33,908,965...34,015,469
JBrowse link
G SLC12A2 solute carrier family 12 member 2 ISO (MGI:6392919|PMID:11940530) ARUK-UCL PMID:11940530 MGI:6392919 NCBI chr 2:131,016,430...131,109,307
Ensembl chr 2:131,016,430...131,109,305
JBrowse link
succinate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PFN1 profilin 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:51,962,642...51,965,570
Ensembl chr12:51,961,696...51,973,660
JBrowse link
G SLC13A2 solute carrier family 13 member 2 IEA Ensembl GO_REF:0000107 NCBI chr12:44,733,038...44,754,476
Ensembl chr12:44,730,773...44,754,468
JBrowse link
G SLC13A3 solute carrier family 13 member 3 IEA Ensembl GO_REF:0000107 NCBI chr17:48,714,180...48,792,280
Ensembl chr17:48,714,183...48,815,123
JBrowse link
G SLC13A5 solute carrier family 13 member 5 IEA GOC GO_REF:0000108 NCBI chr12:50,679,900...50,710,985
Ensembl chr12:50,679,252...50,710,983
JBrowse link
G SLC25A10 solute carrier family 25 member 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:1,191,242...1,197,439 JBrowse link
G SLC25A11 solute carrier family 25 member 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:51,970,794...51,973,668
Ensembl chr12:51,970,805...51,975,548
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:106,828,695...106,859,128
Ensembl chr  X:106,828,731...106,859,126
JBrowse link
succinate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC13A3 solute carrier family 13 member 3 ISO RGD PMID:10992006, PMID:12177002, PMID:15836629, PMID:16524379 RGD:2303797, RGD:2303955, RGD:2303956, RGD:633417 NCBI chr17:48,714,180...48,792,280
Ensembl chr17:48,714,183...48,815,123
JBrowse link
G SLC13A5 solute carrier family 13 member 5 ISO (MGI:3033559|PMID:14656221) RGD
MGI
PMID:12177002, PMID:14656221, PMID:16524379 MGI:3033559, RGD:2303797, RGD:633417 NCBI chr12:50,679,900...50,710,985
Ensembl chr12:50,679,252...50,710,983
JBrowse link
G SLC25A10 solute carrier family 25 member 10 ISO RGD PMID:9733776 RGD:634162 NCBI chr12:1,191,242...1,197,439 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16548
    localization 5910
      establishment of localization 4408
        transport 4261
          ion transport 3194
            anion transport 2449
              organic substance transport 2324
                organic anion transport 379
                  carboxylic acid transport 294
                    dicarboxylic acid transport 96
                      C4-dicarboxylate transport 25
                        D-aspartate transport + 6
                        L-aspartate transmembrane transport + 8
                        aspartate secretion + 2
                        aspartate transmembrane import into vacuole 0
                        aspartate transmembrane transport 8
                        fumarate transport 0
                        malate transport + 4
                        oxaloacetate transport + 4
                        succinate transport + 7
                        tartrate transmembrane transport 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.