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ONTOLOGY REPORT - ANNOTATIONS


Term:C4-dicarboxylate transport
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Accession:GO:0015740 term browser browse the term
Definition:The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.


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aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRC8A leucine rich repeat containing 8 VRAC subunit A IEA Ensembl GO_REF:0000107 NCBI chr 9:128,882,133...128,918,042
Ensembl chr 9:128,882,133...128,918,039
Ensembl chr 9:128,882,133...128,918,039
JBrowse link
G LRRC8C leucine rich repeat containing 8 VRAC subunit C IEA Ensembl GO_REF:0000107 NCBI chr 1:89,615,810...89,719,533
Ensembl chr 1:89,633,072...89,769,903
JBrowse link
G LRRC8D leucine rich repeat containing 8 VRAC subunit D IMP (PMID:28193731) UniProtKB PMID:28193731 NCBI chr 1:89,821,014...89,936,611
Ensembl chr 1:89,821,014...89,936,611
JBrowse link
G LRRC8E leucine rich repeat containing 8 VRAC subunit E IMP (PMID:28193731) UniProtKB PMID:28193731 NCBI chr19:7,888,510...7,902,016
Ensembl chr19:7,888,505...7,902,021
JBrowse link
G SLC13A3 solute carrier family 13 member 3 ISO RGD PMID:10992006, PMID:15836629 RGD:2303955, RGD:2303956 NCBI chr20:46,557,828...46,684,485
Ensembl chr20:46,557,823...46,684,467
JBrowse link
G SLC1A6 solute carrier family 1 member 6 TAS (PMID:7791878) PINC PMID:7791878 NCBI chr19:14,950,033...15,010,643
Ensembl chr19:14,950,034...15,022,990
JBrowse link
G SLC25A12 solute carrier family 25 member 12 IDA
IBA
(PMID:11566871)
(PMID:21873635)
UniProtKB
GO_Central
PMID:11566871, PMID:21873635 NCBI chr 2:171,783,405...171,894,244
Ensembl chr 2:171,783,405...171,999,859
JBrowse link
G SLC25A13 solute carrier family 25 member 13 IDA
IBA
(PMID:11566871)
(PMID:21873635)
UniProtKB
GO_Central
PMID:11566871, PMID:21873635 NCBI chr 7:96,120,220...96,322,127
Ensembl chr 7:96,120,220...96,322,147
JBrowse link
G SLC25A18 solute carrier family 25 member 18 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:17,562,470...17,592,256
Ensembl chr22:17,563,450...17,590,995
JBrowse link
G SLC25A22 solute carrier family 25 member 22 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:790,475...798,281
Ensembl chr11:790,475...798,281
JBrowse link
D-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFAP glial fibrillary acidic protein ISO (MGI:3046158|PMID:15135219) MGI PMID:15135219 MGI:3046158 NCBI chr17:44,903,159...44,915,552
Ensembl chr17:44,903,159...44,916,937
JBrowse link
G NTSR1 neurotensin receptor 1 IEA Ensembl GO_REF:0000107 NCBI chr20:62,708,770...62,762,771
Ensembl chr20:62,708,836...62,762,771
JBrowse link
G PRKCD protein kinase C delta ISO RGD PMID:17364745 RGD:1642541 NCBI chr 3:53,161,209...53,192,717
Ensembl chr 3:53,156,009...53,192,717
JBrowse link
G SLC1A1 solute carrier family 1 member 1 IDA
IMP
(PMID:7521911)
(PMID:8857541)
UniProtKB PMID:7521911, PMID:8857541 NCBI chr 9:4,490,466...4,587,469
Ensembl chr 9:4,490,468...4,587,469
JBrowse link
G SLC1A2 solute carrier family 1 member 2 IDA (PMID:7521911) UniProtKB PMID:7521911 NCBI chr11:35,251,205...35,420,058
Ensembl chr11:35,251,205...35,420,063
JBrowse link
G SLC1A3 solute carrier family 1 member 3 IDA
IMP
(PMID:7521911)
(PMID:28032905), (PMID:8123008)
UniProtKB PMID:7521911, PMID:8123008, PMID:28032905 NCBI chr 5:36,606,606...36,688,334
Ensembl chr 5:36,606,355...36,688,334
JBrowse link
D-aspartate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC1A1 solute carrier family 1 member 1 IDA (PMID:7914198) ARUK-UCL PMID:7914198 NCBI chr 9:4,490,466...4,587,469
Ensembl chr 9:4,490,468...4,587,469
JBrowse link
L-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC1A1 solute carrier family 1 member 1 IMP (PMID:8857541) UniProtKB PMID:8857541 NCBI chr 9:4,490,466...4,587,469
Ensembl chr 9:4,490,468...4,587,469
JBrowse link
G SLC1A3 solute carrier family 1 member 3 IDA
IMP
(PMID:20477940)
(PMID:8123008)
UniProtKB PMID:8123008, PMID:20477940 NCBI chr 5:36,606,606...36,688,334
Ensembl chr 5:36,606,355...36,688,334
JBrowse link
G SLC1A4 solute carrier family 1 member 4 ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:64,988,479...65,023,865
Ensembl chr 2:64,988,477...65,023,865
JBrowse link
G SLC1A5 solute carrier family 1 member 5 ISS ARUK-UCL GO_REF:0000024 NCBI chr19:46,774,883...46,788,594
Ensembl chr19:46,774,883...46,788,594
JBrowse link
L-aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC1A1 solute carrier family 1 member 1 IDA
ISS
(PMID:7914198) ARUK-UCL PMID:7914198 GO_REF:0000024 NCBI chr 9:4,490,466...4,587,469
Ensembl chr 9:4,490,468...4,587,469
JBrowse link
G SLC1A2 solute carrier family 1 member 2 ISS ARUK-UCL GO_REF:0000024 NCBI chr11:35,251,205...35,420,058
Ensembl chr11:35,251,205...35,420,063
JBrowse link
G SLC1A6 solute carrier family 1 member 6 IEA GOC GO_REF:0000108 NCBI chr19:14,950,033...15,010,643
Ensembl chr19:14,950,034...15,022,990
JBrowse link
G SLC25A12 solute carrier family 25 member 12 IEA GOC GO_REF:0000108 NCBI chr 2:171,783,405...171,894,244
Ensembl chr 2:171,783,405...171,999,859
JBrowse link
G SLC25A13 solute carrier family 25 member 13 IEA GOC GO_REF:0000108 NCBI chr 7:96,120,220...96,322,127
Ensembl chr 7:96,120,220...96,322,147
JBrowse link
G SLC25A18 solute carrier family 25 member 18 IEA GOC GO_REF:0000108 NCBI chr22:17,562,470...17,592,256
Ensembl chr22:17,563,450...17,590,995
JBrowse link
G SLC25A22 solute carrier family 25 member 22 IEA GOC GO_REF:0000108 NCBI chr11:790,475...798,281
Ensembl chr11:790,475...798,281
JBrowse link
G SLC38A7 solute carrier family 38 member 7 IEA GOC GO_REF:0000108 NCBI chr16:58,665,109...58,684,770
Ensembl chr16:58,665,109...58,684,770
JBrowse link
malate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC25A10 solute carrier family 25 member 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:81,712,284...81,721,012
Ensembl chr17:81,712,236...81,721,016
JBrowse link
G SLC25A11 solute carrier family 25 member 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:4,937,130...4,940,251
Ensembl chr17:4,937,130...4,940,053
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:130,339,892...130,373,360
Ensembl chr  X:130,339,888...130,373,361
JBrowse link
G SLC25A30 solute carrier family 25 member 30 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:45,393,316...45,434,016
Ensembl chr13:45,393,316...45,418,455
JBrowse link
malate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC25A10 solute carrier family 25 member 10 ISO RGD PMID:9733776 RGD:634162 NCBI chr17:81,712,284...81,721,012
Ensembl chr17:81,712,236...81,721,016
JBrowse link
oxaloacetate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC25A10 solute carrier family 25 member 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:81,712,284...81,721,012
Ensembl chr17:81,712,236...81,721,016
JBrowse link
G SLC25A11 solute carrier family 25 member 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:4,937,130...4,940,251
Ensembl chr17:4,937,130...4,940,053
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:130,339,892...130,373,360
Ensembl chr  X:130,339,888...130,373,361
JBrowse link
G SLC25A30 solute carrier family 25 member 30 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:45,393,316...45,434,016
Ensembl chr13:45,393,316...45,418,455
JBrowse link
oxaloacetate(2-) transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC25A10 solute carrier family 25 member 10 IEA GOC GO_REF:0000108 NCBI chr17:81,712,284...81,721,012
Ensembl chr17:81,712,236...81,721,016
JBrowse link
G SLC25A11 solute carrier family 25 member 11 IEA GOC GO_REF:0000108 NCBI chr17:4,937,130...4,940,251
Ensembl chr17:4,937,130...4,940,053
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IEA GOC GO_REF:0000108 NCBI chr  X:130,339,892...130,373,360
Ensembl chr  X:130,339,888...130,373,361
JBrowse link
G SLC25A30 solute carrier family 25 member 30 IEA GOC GO_REF:0000108 NCBI chr13:45,393,316...45,434,016
Ensembl chr13:45,393,316...45,418,455
JBrowse link
positive regulation of aspartate secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase IEA Ensembl GO_REF:0000107 NCBI chr16:8,674,617...8,784,575
Ensembl chr16:8,674,596...8,784,575
JBrowse link
G SLC12A2 solute carrier family 12 member 2 ISS ARUK-UCL GO_REF:0000024 NCBI chr 5:128,083,766...128,189,677
Ensembl chr 5:128,083,766...128,189,677
JBrowse link
succinate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC13A2 solute carrier family 13 member 2 IDA (PMID:26176240) ARUK-UCL PMID:26176240 NCBI chr17:28,473,357...28,497,781
Ensembl chr17:28,473,293...28,497,781
JBrowse link
G SLC13A3 solute carrier family 13 member 3 TAS
IDA
(PMID:10992006)
(PMID:10992006), (PMID:21264516), (PMID:24247155), (PMID:26176240)
ARUK-UCL PMID:10992006, PMID:21264516, PMID:24247155, PMID:26176240 NCBI chr20:46,557,828...46,684,485
Ensembl chr20:46,557,823...46,684,467
JBrowse link
G SLC13A5 solute carrier family 13 member 5 IEA GOC GO_REF:0000108 NCBI chr17:6,684,719...6,713,400
Ensembl chr17:6,684,719...6,713,377
Ensembl chr17:6,684,719...6,713,377
JBrowse link
G SLC25A10 solute carrier family 25 member 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:81,712,284...81,721,012
Ensembl chr17:81,712,236...81,721,016
JBrowse link
G SLC25A11 solute carrier family 25 member 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:4,937,130...4,940,251
Ensembl chr17:4,937,130...4,940,053
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:130,339,892...130,373,360
Ensembl chr  X:130,339,888...130,373,361
JBrowse link
G SLC25A30 solute carrier family 25 member 30 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:45,393,316...45,434,016
Ensembl chr13:45,393,316...45,418,455
JBrowse link
succinate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC13A3 solute carrier family 13 member 3 ISO RGD PMID:10992006, PMID:12177002, PMID:15836629, PMID:16524379 RGD:2303797, RGD:2303955, RGD:2303956, RGD:633417 NCBI chr20:46,557,828...46,684,485
Ensembl chr20:46,557,823...46,684,467
JBrowse link
G SLC13A5 solute carrier family 13 member 5 ISO (MGI:3033559|PMID:14656221) RGD
MGI
PMID:12177002, PMID:14656221, PMID:16524379 MGI:3033559, RGD:2303797, RGD:633417 NCBI chr17:6,684,719...6,713,400
Ensembl chr17:6,684,719...6,713,377
Ensembl chr17:6,684,719...6,713,377
JBrowse link
G SLC25A10 solute carrier family 25 member 10 ISO RGD PMID:9733776 RGD:634162 NCBI chr17:81,712,284...81,721,012
Ensembl chr17:81,712,236...81,721,016
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18672
    localization 7210
      establishment of localization 5658
        transport 5516
          ion transport 3882
            anion transport 3090
              organic substance transport 2964
                organic anion transport 434
                  carboxylic acid transport 328
                    dicarboxylic acid transport 119
                      C4-dicarboxylate transport 27
                        D-aspartate transport + 6
                        L-aspartate transmembrane transport + 11
                        aspartate secretion + 2
                        aspartate transmembrane import into vacuole 0
                        aspartate transmembrane transport 10
                        fumarate transport 0
                        malate transport + 4
                        oxaloacetate transport + 4
                        succinate transport + 7
                        tartrate transmembrane transport 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.