Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:C4-dicarboxylate transport
go back to main search page
Accession:GO:0015740 term browser browse the term
Definition:The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.


show annotations for term's descendants           Sort by:
 
aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRRC8A leucine rich repeat containing 8 VRAC subunit A ISO PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr 9:54,732,847...54,760,077
Ensembl chr 9:54,734,505...54,756,780
JBrowse link
G LRRC8C leucine rich repeat containing 8 VRAC subunit C ISO PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr 6:58,895,769...58,932,729
Ensembl chr 6:58,899,996...58,932,729
JBrowse link
G LRRC8D leucine rich repeat containing 8 VRAC subunit D IEA Ensembl GO_REF:0000107 NCBI chr 6:58,692,352...58,805,004
Ensembl chr 6:58,692,792...58,695,368
JBrowse link
G LRRC8E leucine rich repeat containing 8 VRAC subunit E IEA Ensembl GO_REF:0000107 NCBI chr20:52,585,636...52,593,207
Ensembl chr20:52,588,973...52,593,214
JBrowse link
G SLC13A3 solute carrier family 13 member 3 ISO RGD PMID:10992006, PMID:15836629 RGD:2303955, RGD:2303956 NCBI chr24:33,810,594...33,884,169
Ensembl chr24:33,809,731...33,884,139
JBrowse link
G SLC25A12 solute carrier family 25 member 12 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr36:16,185,011...16,391,080
Ensembl chr36:16,185,649...16,483,016
JBrowse link
G SLC25A13 solute carrier family 25 member 13 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:21,295,651...21,481,767
Ensembl chr14:21,296,512...21,482,236
JBrowse link
G SLC25A18 solute carrier family 25 member 18 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:45,196,172...45,221,751
Ensembl chr27:45,196,670...45,221,297
JBrowse link
D-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFAP glial fibrillary acidic protein ISO (MGI:3046158|PMID:15135219) MGI PMID:15135219 MGI:3046158 NCBI chr 9:18,569,868...18,579,463
Ensembl chr 9:18,569,892...18,579,461
JBrowse link
G NTSR1 neurotensin receptor 1 ISO RGD PMID:12123836 RGD:1566569 NCBI chr24:46,576,690...46,615,192
Ensembl chr24:46,576,501...46,615,206
JBrowse link
G PRKCD protein kinase C delta ISO RGD PMID:17364745 RGD:1642541 NCBI chr20:36,723,491...36,751,982
Ensembl chr20:36,723,809...36,752,191
JBrowse link
G SLC1A1 solute carrier family 1 member 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:92,898,274...92,978,260
Ensembl chr 1:92,898,274...92,978,260
JBrowse link
G SLC1A2 solute carrier family 1 member 2 IEA Ensembl GO_REF:0000107 NCBI chr18:32,565,258...32,717,052
Ensembl chr18:32,565,258...32,709,225
JBrowse link
G SLC1A3 solute carrier family 1 member 3 IEA Ensembl GO_REF:0000107 NCBI chr 4:71,936,128...72,014,119
Ensembl chr 4:71,936,126...72,014,173
JBrowse link
D-aspartate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC1A1 solute carrier family 1 member 1 ISO (PMID:7914198) ARUK-UCL PMID:7914198 NCBI chr 1:92,898,274...92,978,260
Ensembl chr 1:92,898,274...92,978,260
JBrowse link
L-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC1A1 solute carrier family 1 member 1 IEA Ensembl GO_REF:0000107 NCBI chr 1:92,898,274...92,978,260
Ensembl chr 1:92,898,274...92,978,260
JBrowse link
G SLC1A3 solute carrier family 1 member 3 IEA Ensembl GO_REF:0000107 NCBI chr 4:71,936,128...72,014,119
Ensembl chr 4:71,936,126...72,014,173
JBrowse link
G SLC1A4 solute carrier family 1 member 4 IEA Ensembl GO_REF:0000107 NCBI chr10:64,482,840...64,508,288
Ensembl chr10:64,483,060...64,505,747
JBrowse link
G SLC1A5 solute carrier family 1 member 5 ISO PMID:14622120
(MGI:6393124|PMID:14622120)
ARUK-UCL PMID:14622120 MGI:6393124, RGD:21201277 NCBI chr 1:109,150,205...109,161,375
Ensembl chr 1:109,150,205...109,161,141
JBrowse link
L-aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC1A1 solute carrier family 1 member 1 ISO (PMID:7914198) ARUK-UCL PMID:7914198 NCBI chr 1:92,898,274...92,978,260
Ensembl chr 1:92,898,274...92,978,260
JBrowse link
G SLC25A12 solute carrier family 25 member 12 IEA GOC GO_REF:0000108 NCBI chr36:16,185,011...16,391,080
Ensembl chr36:16,185,649...16,483,016
JBrowse link
G SLC25A13 solute carrier family 25 member 13 IEA GOC GO_REF:0000108 NCBI chr14:21,295,651...21,481,767
Ensembl chr14:21,296,512...21,482,236
JBrowse link
G SLC25A18 solute carrier family 25 member 18 IEA GOC GO_REF:0000108 NCBI chr27:45,196,172...45,221,751
Ensembl chr27:45,196,670...45,221,297
JBrowse link
G SLC38A7 solute carrier family 38 member 7 IEA GOC GO_REF:0000108 NCBI chr 2:57,998,908...58,011,288
Ensembl chr 2:57,999,419...58,009,461
JBrowse link
malate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC25A10 solute carrier family 25 member 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:483,864...491,613 JBrowse link
G SLC25A11 solute carrier family 25 member 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:31,676,826...31,680,138
Ensembl chr 5:31,675,740...31,679,933
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:101,463,376...101,496,249
Ensembl chr  X:101,463,860...101,496,143
JBrowse link
G SLC25A30 solute carrier family 25 member 30 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:5,636,039...5,664,027
Ensembl chr22:5,638,583...5,658,025
JBrowse link
malate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC25A10 solute carrier family 25 member 10 ISO RGD PMID:9733776 RGD:634162 NCBI chr 9:483,864...491,613 JBrowse link
oxaloacetate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC25A10 solute carrier family 25 member 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:483,864...491,613 JBrowse link
G SLC25A11 solute carrier family 25 member 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:31,676,826...31,680,138
Ensembl chr 5:31,675,740...31,679,933
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:101,463,376...101,496,249
Ensembl chr  X:101,463,860...101,496,143
JBrowse link
G SLC25A30 solute carrier family 25 member 30 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:5,636,039...5,664,027
Ensembl chr22:5,638,583...5,658,025
JBrowse link
oxaloacetate(2-) transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC25A10 solute carrier family 25 member 10 IEA GOC GO_REF:0000108 NCBI chr 9:483,864...491,613 JBrowse link
G SLC25A11 solute carrier family 25 member 11 IEA GOC GO_REF:0000108 NCBI chr 5:31,676,826...31,680,138
Ensembl chr 5:31,675,740...31,679,933
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IEA GOC GO_REF:0000108 NCBI chr  X:101,463,376...101,496,249
Ensembl chr  X:101,463,860...101,496,143
JBrowse link
G SLC25A30 solute carrier family 25 member 30 IEA GOC GO_REF:0000108 NCBI chr22:5,636,039...5,664,027
Ensembl chr22:5,638,583...5,658,025
JBrowse link
positive regulation of aspartate secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABAT 4-aminobutyrate aminotransferase ISO RGD PMID:2342602 RGD:10054058 NCBI chr 6:33,385,779...33,471,348
Ensembl chr 6:33,376,996...33,471,326
JBrowse link
G SLC12A2 solute carrier family 12 member 2 ISO (MGI:6392919|PMID:11940530) ARUK-UCL PMID:11940530 MGI:6392919 NCBI chr11:17,143,943...17,256,248
Ensembl chr11:17,143,943...17,253,695
JBrowse link
succinate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC13A2 solute carrier family 13 member 2 IEA Ensembl GO_REF:0000107 NCBI chr 9:42,689,296...42,713,209
Ensembl chr 9:42,688,468...42,712,678
JBrowse link
G SLC13A3 solute carrier family 13 member 3 IEA GOC
Ensembl
GO_REF:0000107, GO_REF:0000108 NCBI chr24:33,810,594...33,884,169
Ensembl chr24:33,809,731...33,884,139
JBrowse link
G SLC13A5 solute carrier family 13 member 5 IEA GOC GO_REF:0000108 NCBI chr 5:30,655,167...30,677,551
Ensembl chr 5:30,655,760...30,674,653
JBrowse link
G SLC25A10 solute carrier family 25 member 10 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:483,864...491,613 JBrowse link
G SLC25A11 solute carrier family 25 member 11 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:31,676,826...31,680,138
Ensembl chr 5:31,675,740...31,679,933
JBrowse link
G SLC25A14 solute carrier family 25 member 14 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:101,463,376...101,496,249
Ensembl chr  X:101,463,860...101,496,143
JBrowse link
G SLC25A30 solute carrier family 25 member 30 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:5,636,039...5,664,027
Ensembl chr22:5,638,583...5,658,025
JBrowse link
succinate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC13A3 solute carrier family 13 member 3 ISO RGD PMID:10992006, PMID:12177002, PMID:15836629, PMID:16524379 RGD:2303797, RGD:2303955, RGD:2303956, RGD:633417 NCBI chr24:33,810,594...33,884,169
Ensembl chr24:33,809,731...33,884,139
JBrowse link
G SLC13A5 solute carrier family 13 member 5 ISO (MGI:3033559|PMID:14656221) RGD
MGI
PMID:12177002, PMID:14656221, PMID:16524379 MGI:3033559, RGD:2303797, RGD:633417 NCBI chr 5:30,655,167...30,677,551
Ensembl chr 5:30,655,760...30,674,653
JBrowse link
G SLC25A10 solute carrier family 25 member 10 ISO RGD PMID:9733776 RGD:634162 NCBI chr 9:483,864...491,613 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16190
    localization 5958
      establishment of localization 4452
        transport 4303
          ion transport 3248
            anion transport 2474
              organic substance transport 2348
                organic anion transport 367
                  carboxylic acid transport 285
                    dicarboxylic acid transport 97
                      C4-dicarboxylate transport 25
                        D-aspartate transport + 6
                        L-aspartate transmembrane transport + 8
                        aspartate secretion + 2
                        aspartate transmembrane import into vacuole 0
                        aspartate transmembrane transport 8
                        fumarate transport 0
                        malate transport + 4
                        oxaloacetate transport + 4
                        succinate transport + 7
                        tartrate transmembrane transport 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.