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ONTOLOGY REPORT - ANNOTATIONS


Term:C4-dicarboxylate transport
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Accession:GO:0015740 term browser browse the term
Definition:The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.


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aspartate transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrc8a leucine rich repeat containing 8 VRAC subunit A involved_in IMP PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr 3:13,509,577...13,537,174
Ensembl chr 3:13,510,513...13,536,202
JBrowse link
G Lrrc8c leucine rich repeat containing 8 VRAC subunit C involved_in IMP PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr14:4,223,901...4,315,590
Ensembl chr14:4,227,832...4,315,249
JBrowse link
G Lrrc8d leucine rich repeat containing 8 VRAC subunit D involved_in ISS
IMP
ISO
IEA
GO_REF:0000024
PMID:28833202
(PMID:28193731)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28193731 PMID:28833202 GO_REF:0000024 GO_REF:0000107, RGD:13673739 NCBI chr14:4,029,971...4,134,922
Ensembl chr14:4,029,473...4,135,877
JBrowse link
G Lrrc8e leucine rich repeat containing 8 VRAC subunit E involved_in ISO
ISS
(PMID:28193731)
GO_REF:0000024
RGD
UniProt
PMID:28193731 GO_REF:0000024 NCBI chr12:2,578,240...2,589,407
Ensembl chr12:2,578,315...2,589,412
JBrowse link
G Slc13a3 solute carrier family 13 member 3 IDA RGD PMID:10992006 PMID:15836629 RGD:2303955, RGD:2303956 NCBI chr 3:154,141,878...154,204,604
Ensembl chr 3:154,141,872...154,204,606
JBrowse link
G Slc25a12 solute carrier family 25 member 12 involved_in ISO
IBA
(PMID:11566871)
PMID:21873635
RGD PMID:11566871 PMID:21873635 RGD:13792537 NCBI chr 3:56,098,080...56,192,188
Ensembl chr 3:56,097,269...56,192,100
JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3028639 (MGI:3027207|PMID:14701727)
(PMID:11566871)
RGD PMID:11566871 PMID:14701727 PMID:21873635 MGI:3027207, RGD:13792537 NCBI chr 4:34,179,224...34,361,912
Ensembl chr 4:34,179,224...34,361,902
JBrowse link
G Slc25a18 solute carrier family 25 member 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:154,000,808...154,021,373
Ensembl chr 4:154,000,990...154,021,372
JBrowse link
G Slc25a22 solute carrier family 25 member 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:196,528,471...196,536,398
Ensembl chr 1:196,528,472...196,536,331
JBrowse link
G Slc3a1 solute carrier family 3 member 1 involved_in ISO (MGI:5754915|PMID:26739563) RGD PMID:26739563 MGI:5754915 NCBI chr 6:9,608,169...9,641,881
Ensembl chr 6:9,608,178...9,641,907
JBrowse link
G Slc7a13 solute carrier family 7 member 13 involved_in ISO (MGI:5754915|PMID:26739563) RGD PMID:26739563 MGI:5754915 NCBI chr 5:33,277,416...33,298,105
Ensembl chr 5:33,277,416...33,298,092
JBrowse link
D-aspartate import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within_positive_effect ISO MGI:1857176 (MGI:3046158|PMID:15135219) RGD PMID:15135219 MGI:3046158 NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
JBrowse link
G Ntsr1 neurotensin receptor 1 IDA RGD PMID:12123836 RGD:1566569 NCBI chr 3:167,606,215...167,656,377
Ensembl chr 3:167,606,215...167,656,377
JBrowse link
G Prkcd protein kinase C, delta IMP RGD PMID:17364745 RGD:1642541 NCBI chr16:5,769,226...5,807,214
Ensembl chr16:5,769,215...5,799,352
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO (PMID:7521911), (PMID:8857541) RGD PMID:7521911 PMID:8857541 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Slc1a2 solute carrier family 1 member 2 involved_in ISO (PMID:7521911) RGD PMID:7521911 NCBI chr 3:89,005,129...89,126,498
Ensembl chr 3:89,005,129...89,126,498
JBrowse link
G Slc1a3 solute carrier family 1 member 3 involved_in ISO
IEA
ISS
(PMID:28032905), (PMID:7521911), (PMID:8123008)
GO_REF:0000107
(MGI:5897520|PMID:28032905)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:7521911 PMID:8123008 PMID:28032905 GO_REF:0000024 GO_REF:0000107 MGI:5897520 NCBI chr 2:57,755,495...57,830,605
Ensembl chr 2:57,755,497...57,830,605
JBrowse link
D-aspartate transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a1 solute carrier family 1 member 1 involved_in ISO (PMID:7914198) RGD PMID:7914198 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
fumarate transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc13a5 solute carrier family 13 member 5 involved_in ISO
IEA
ISS
(PMID:26324167)
(MGI:6716963|PMID:26324167)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26324167 GO_REF:0000024 GO_REF:0000107 MGI:6716963 NCBI chr10:56,866,249...56,891,189
Ensembl chr10:56,866,249...56,890,945
JBrowse link
L-aspartate import across plasma membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a1 solute carrier family 1 member 1 involved_in ISO
ISS
(PMID:8857541)
GO_REF:0000024
RGD
UniProt
PMID:8857541 GO_REF:0000024 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Slc1a3 solute carrier family 1 member 3 involved_in ISS
IEA
ISO
IMP
GO_REF:0000024
GO_REF:0000107
(PMID:20477940), (PMID:8123008)
PMID:1279699
UniProt
Ensembl
RGD
PMID:8123008 PMID:20477940 PMID:1279699 GO_REF:0000024 GO_REF:0000107, RGD:70007 NCBI chr 2:57,755,495...57,830,605
Ensembl chr 2:57,755,497...57,830,605
JBrowse link
G Slc1a4 solute carrier family 1 member 4 involved_in ISO (MGI:6393124|PMID:14622120) RGD PMID:14622120 MGI:6393124 NCBI chr14:94,530,801...94,560,190
Ensembl chr14:94,529,084...94,560,418
JBrowse link
G Slc1a5 solute carrier family 1 member 5 involved_in IDA
ISO
PMID:14622120
(MGI:6393124|PMID:14622120)
RGD PMID:14622120 PMID:14622120 MGI:6393124, RGD:21201277 NCBI chr 1:77,456,849...77,470,952
Ensembl chr 1:77,456,694...77,470,952
JBrowse link
L-aspartate transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc13a3 solute carrier family 13 member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:154,141,878...154,204,604
Ensembl chr 3:154,141,872...154,204,606
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO (PMID:7914198) RGD PMID:7914198 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Slc25a12 solute carrier family 25 member 12 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:56,098,080...56,192,188
Ensembl chr 3:56,097,269...56,192,100
JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:34,179,224...34,361,912
Ensembl chr 4:34,179,224...34,361,902
JBrowse link
G Slc25a18 solute carrier family 25 member 18 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:154,000,808...154,021,373
Ensembl chr 4:154,000,990...154,021,372
JBrowse link
G Slc25a22 solute carrier family 25 member 22 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:196,528,471...196,536,398
Ensembl chr 1:196,528,472...196,536,331
JBrowse link
G Slc38a7 solute carrier family 38, member 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:9,209,203...9,225,472
Ensembl chr19:9,209,257...9,225,454
JBrowse link
malate transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:105,765,598...105,775,159
Ensembl chr10:105,765,372...105,773,556
JBrowse link
G Slc25a11 solute carrier family 25 member 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:55,358,163...55,360,278
Ensembl chr10:55,357,597...55,360,410
JBrowse link
G Slc25a14 solute carrier family 25 member 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:127,807,630...127,845,823
Ensembl chr  X:127,807,449...127,845,823
JBrowse link
G Slc25a30 solute carrier family 25, member 30 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:51,076,998...51,099,613
Ensembl chr15:51,077,002...51,099,613
JBrowse link
malate transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 IDA RGD PMID:9733776 RGD:634162 NCBI chr10:105,765,598...105,775,159
Ensembl chr10:105,765,372...105,773,556
JBrowse link
oxaloacetate transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc13a5 solute carrier family 13 member 5 involved_in ISO
IEA
ISS
(PMID:26324167)
(MGI:6716963|PMID:26324167)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26324167 GO_REF:0000024 GO_REF:0000107 MGI:6716963 NCBI chr10:56,866,249...56,891,189
Ensembl chr10:56,866,249...56,890,945
JBrowse link
G Slc25a10 solute carrier family 25 member 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:105,765,598...105,775,159
Ensembl chr10:105,765,372...105,773,556
JBrowse link
G Slc25a11 solute carrier family 25 member 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:55,358,163...55,360,278
Ensembl chr10:55,357,597...55,360,410
JBrowse link
G Slc25a14 solute carrier family 25 member 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:127,807,630...127,845,823
Ensembl chr  X:127,807,449...127,845,823
JBrowse link
G Slc25a30 solute carrier family 25, member 30 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:51,076,998...51,099,613
Ensembl chr15:51,077,002...51,099,613
JBrowse link
oxaloacetate(2-) transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:105,765,598...105,775,159
Ensembl chr10:105,765,372...105,773,556
JBrowse link
G Slc25a11 solute carrier family 25 member 11 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:55,358,163...55,360,278
Ensembl chr10:55,357,597...55,360,410
JBrowse link
G Slc25a14 solute carrier family 25 member 14 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:127,807,630...127,845,823
Ensembl chr  X:127,807,449...127,845,823
JBrowse link
G Slc25a30 solute carrier family 25, member 30 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:51,076,998...51,099,613
Ensembl chr15:51,077,002...51,099,613
JBrowse link
positive regulation of aspartate secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:2342602 RGD:10054058 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
JBrowse link
G Slc12a2 solute carrier family 12 member 2 acts_upstream_of_or_within ISO (MGI:6392919|PMID:11940530) RGD PMID:11940530 MGI:6392919 NCBI chr18:51,348,282...51,416,448
Ensembl chr18:51,348,302...51,416,440
JBrowse link
succinate transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc13a2 solute carrier family 13 member 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:6436400|PMID:26176240)
(PMID:26176240)
Ensembl
RGD
PMID:26176240 GO_REF:0000107 MGI:6436400 NCBI chr10:63,291,813...63,319,127
Ensembl chr10:63,291,815...63,319,127
JBrowse link
G Slc13a3 solute carrier family 13 member 3 involved_in IEA
ISO
IDA
GO_REF:0000107
(MGI:6436400|PMID:26176240)
PMID:9920886
(PMID:10992006), (PMID:21264516), (PMID:24247155), (PMID:26176240)
Ensembl
RGD
PMID:10992006 PMID:21264516 PMID:24247155 PMID:26176240 PMID:9920886 GO_REF:0000107 MGI:6436400, RGD:634021 NCBI chr 3:154,141,878...154,204,604
Ensembl chr 3:154,141,872...154,204,606
JBrowse link
G Slc13a5 solute carrier family 13 member 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:56,866,249...56,891,189
Ensembl chr10:56,866,249...56,890,945
JBrowse link
G Slc25a10 solute carrier family 25 member 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:105,765,598...105,775,159
Ensembl chr10:105,765,372...105,773,556
JBrowse link
G Slc25a11 solute carrier family 25 member 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:55,358,163...55,360,278
Ensembl chr10:55,357,597...55,360,410
JBrowse link
G Slc25a14 solute carrier family 25 member 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:127,807,630...127,845,823
Ensembl chr  X:127,807,449...127,845,823
JBrowse link
G Slc25a30 solute carrier family 25, member 30 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:51,076,998...51,099,613
Ensembl chr15:51,077,002...51,099,613
JBrowse link
succinate transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc13a3 solute carrier family 13 member 3 IDA RGD PMID:12177002 PMID:15836629 PMID:10992006 PMID:16524379 RGD:633417, RGD:2303956, RGD:2303955, RGD:2303797 NCBI chr 3:154,141,878...154,204,604
Ensembl chr 3:154,141,872...154,204,606
JBrowse link
G Slc13a5 solute carrier family 13 member 5 involved_in
acts_upstream_of_or_within
IDA
ISO
(MGI:6716963|PMID:26324167)
(MGI:3033559|PMID:14656221)
(PMID:26324167)
RGD PMID:14656221 PMID:26324167 PMID:16524379 PMID:12177002 MGI:3033559 MGI:6716963, RGD:2303797, RGD:633417 NCBI chr10:56,866,249...56,891,189
Ensembl chr10:56,866,249...56,890,945
JBrowse link
G Slc25a10 solute carrier family 25 member 10 IDA RGD PMID:9733776 RGD:634162 NCBI chr10:105,765,598...105,775,159
Ensembl chr10:105,765,372...105,773,556
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    localization 6447
      establishment of localization 4864
        transport 4700
          organic substance transport 2479
            organic anion transport 385
              carboxylic acid transport 310
                dicarboxylic acid transport 104
                  C4-dicarboxylate transport 28
                    D-aspartate transport + 6
                    L-aspartate transmembrane transport + 10
                    aspartate secretion + 2
                    aspartate transmembrane import into vacuole 0
                    aspartate transmembrane transport 11
                    fumarate transport 1
                    malate transport + 4
                    oxaloacetate transport + 5
                    succinate transport + 7
                    tartrate transmembrane transport 0
Path 2
Term Annotations click to browse term
  biological_process 19492
    localization 6447
      establishment of localization 4864
        transport 4700
          ion transport 1640
            anion transport 544
              organic anion transport 385
                carboxylic acid transport 310
                  dicarboxylic acid transport 104
                    C4-dicarboxylate transport 28
                      D-aspartate transport + 6
                      L-aspartate transmembrane transport + 10
                      aspartate secretion + 2
                      aspartate transmembrane import into vacuole 0
                      aspartate transmembrane transport 11
                      fumarate transport 1
                      malate transport + 4
                      oxaloacetate transport + 5
                      succinate transport + 7
                      tartrate transmembrane transport 0
paths to the root