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ONTOLOGY REPORT - ANNOTATIONS


Term:C4-dicarboxylate transport
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Accession:GO:0015740 term browser browse the term
Definition:The directed movement of a C4-dicarboxylate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A C4-dicarboxylate is the anion of a dicarboxylic acid that contains four carbon atoms.


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aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100911440 mitochondrial glutamate carrier 1-like IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,973,482...213,979,016
Ensembl chr 1:214,410,417...214,414,897
Ensembl chr 1:214,410,417...214,414,897
JBrowse link
G Lrrc8a leucine rich repeat containing 8 VRAC subunit A IMP PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr 3:8,801,544...8,829,506
Ensembl chr 3:8,802,852...8,828,533
JBrowse link
G Lrrc8c leucine rich repeat containing 8 VRAC subunit C IMP PMID:28833202 UniProt PMID:28833202 RGD:13673739 NCBI chr14:5,283,655...5,378,738
Ensembl chr14:5,283,647...5,378,726
JBrowse link
G Lrrc8d leucine rich repeat containing 8 VRAC subunit D ISS
ISO
IMP
IEA
GO_REF:0000024
(PMID:28193731)
PMID:28833202
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:28193731, PMID:28833202 GO_REF:0000024, GO_REF:0000107, RGD:13673739 NCBI chr14:5,085,606...5,194,808
Ensembl chr14:5,086,054...5,101,177
JBrowse link
G Lrrc8e leucine rich repeat containing 8 VRAC subunit E ISS
ISO
GO_REF:0000024
(PMID:28193731)
UniProt
RGD
PMID:28193731 GO_REF:0000024 NCBI chr12:2,557,267...2,568,416
Ensembl chr12:2,557,275...2,568,382
JBrowse link
G Slc13a3 solute carrier family 13 member 3 IDA RGD PMID:10992006, PMID:15836629 RGD:2303955, RGD:2303956 NCBI chr 3:162,084,336...162,147,398
Ensembl chr 3:162,084,315...162,147,393
JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO
IBA
(PMID:11566871)
PMID:21873635
RGD PMID:11566871, PMID:21873635 RGD:13792537 NCBI chr 3:57,881,951...57,998,214
Ensembl chr 3:57,882,370...57,957,346
JBrowse link
G Slc25a13 solute carrier family 25 member 13 ISO
IBA
MGI:MGI:3028639 (MGI:MGI:3027207|PMID:14701727)
PMID:21873635
(PMID:11566871)
RGD PMID:11566871, PMID:14701727, PMID:21873635 MGI:MGI:3027207, RGD:13792537 NCBI chr 4:31,134,165...31,757,006
Ensembl chr 4:31,608,269...31,730,386
JBrowse link
G Slc25a18 solute carrier family 25 member 18 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:153,330,069...153,350,447
Ensembl chr 4:153,330,069...153,350,446
JBrowse link
G Slc25a22 solute carrier family 25 member 22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:214,410,388...214,418,236
Ensembl chr 1:214,410,417...214,414,897
JBrowse link
D-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfap glial fibrillary acidic protein ISO MGI:MGI:1857176 (MGI:MGI:3046158|PMID:15135219) RGD PMID:15135219 MGI:MGI:3046158 NCBI chr10:90,990,762...90,999,435
Ensembl chr10:90,990,762...90,999,506
JBrowse link
G Ntsr1 neurotensin receptor 1 IDA RGD PMID:12123836 RGD:1566569 NCBI chr 3:175,982,313...176,046,345
Ensembl chr 3:175,885,894...176,046,345
JBrowse link
G Prkcd protein kinase C, delta IMP RGD PMID:17364745 RGD:1642541 NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
JBrowse link
G Slc1a1 solute carrier family 1 member 1 ISO (PMID:7521911), (PMID:8857541) RGD PMID:7521911, PMID:8857541 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056
JBrowse link
G Slc1a2 solute carrier family 1 member 2 ISO (PMID:7521911) RGD PMID:7521911 NCBI chr 3:92,518,679...92,665,731
Ensembl chr 3:92,640,752...92,665,644
JBrowse link
G Slc1a3 solute carrier family 1 member 3 ISO
IEA
ISS
(MGI:MGI:5897520|PMID:28032905)
(PMID:28032905), (PMID:7521911), (PMID:8123008)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:7521911, PMID:8123008, PMID:28032905 GO_REF:0000024, GO_REF:0000107, MGI:MGI:5897520 NCBI chr 2:57,860,881...57,935,363
Ensembl chr 2:57,860,834...57,935,363
JBrowse link
D-aspartate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a1 solute carrier family 1 member 1 ISO (PMID:7914198) RGD PMID:7914198 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056
JBrowse link
L-aspartate import across plasma membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a1 solute carrier family 1 member 1 ISO
ISS
(PMID:8857541)
GO_REF:0000024
RGD
UniProt
PMID:8857541 GO_REF:0000024 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056
JBrowse link
G Slc1a3 solute carrier family 1 member 3 IMP
ISO
ISS
IEA
PMID:1279699
(PMID:20477940), (PMID:8123008)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:8123008, PMID:20477940, PMID:1279699 GO_REF:0000024, GO_REF:0000107, RGD:70007 NCBI chr 2:57,860,881...57,935,363
Ensembl chr 2:57,860,834...57,935,363
JBrowse link
G Slc1a4 solute carrier family 1 member 4 ISO (MGI:MGI:6393124|PMID:14622120) RGD PMID:14622120 MGI:MGI:6393124 NCBI chr14:104,582,884...104,612,417
Ensembl chr14:104,581,190...104,612,597
JBrowse link
G Slc1a5 solute carrier family 1 member 5 IDA
ISO
PMID:14622120
(MGI:MGI:6393124|PMID:14622120)
RGD PMID:14622120, PMID:14622120 MGI:MGI:6393124, RGD:21201277 NCBI chr 1:78,710,686...78,724,789
Ensembl chr 1:78,710,539...78,724,794
JBrowse link
L-aspartate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100911440 mitochondrial glutamate carrier 1-like IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:213,973,482...213,979,016
Ensembl chr 1:214,410,417...214,414,897
Ensembl chr 1:214,410,417...214,414,897
JBrowse link
G Slc13a3 solute carrier family 13 member 3 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:162,084,336...162,147,398
Ensembl chr 3:162,084,315...162,147,393
JBrowse link
G Slc1a1 solute carrier family 1 member 1 ISO (PMID:7914198) RGD PMID:7914198 NCBI chr 1:246,955,017...247,035,159
Ensembl chr 1:246,954,980...247,037,056
JBrowse link
G Slc25a12 solute carrier family 25 member 12 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:57,881,951...57,998,214
Ensembl chr 3:57,882,370...57,957,346
JBrowse link
G Slc25a13 solute carrier family 25 member 13 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:31,134,165...31,757,006
Ensembl chr 4:31,608,269...31,730,386
JBrowse link
G Slc25a18 solute carrier family 25 member 18 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:153,330,069...153,350,447
Ensembl chr 4:153,330,069...153,350,446
JBrowse link
G Slc25a22 solute carrier family 25 member 22 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:214,410,388...214,418,236
Ensembl chr 1:214,410,417...214,414,897
JBrowse link
G Slc38a7 solute carrier family 38, member 7 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:9,622,594...9,638,221
Ensembl chr19:9,622,611...9,638,222
JBrowse link
malate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link
G Slc25a11 solute carrier family 25 member 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,265,903...57,268,018
Ensembl chr10:57,265,704...57,268,081
JBrowse link
G Slc25a14 solute carrier family 25 member 14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:135,470,855...135,509,223
Ensembl chr  X:135,470,915...135,509,221
JBrowse link
G Slc25a30 solute carrier family 25, member 30 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:57,811,612...57,834,173
Ensembl chr15:57,813,356...57,834,173
JBrowse link
malate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 IDA RGD PMID:9733776 RGD:634162 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link
oxaloacetate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link
G Slc25a11 solute carrier family 25 member 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,265,903...57,268,018
Ensembl chr10:57,265,704...57,268,081
JBrowse link
G Slc25a14 solute carrier family 25 member 14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:135,470,855...135,509,223
Ensembl chr  X:135,470,915...135,509,221
JBrowse link
G Slc25a30 solute carrier family 25, member 30 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:57,811,612...57,834,173
Ensembl chr15:57,813,356...57,834,173
JBrowse link
oxaloacetate(2-) transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a10 solute carrier family 25 member 10 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link
G Slc25a11 solute carrier family 25 member 11 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:57,265,903...57,268,018
Ensembl chr10:57,265,704...57,268,081
JBrowse link
G Slc25a14 solute carrier family 25 member 14 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:135,470,855...135,509,223
Ensembl chr  X:135,470,915...135,509,221
JBrowse link
G Slc25a30 solute carrier family 25, member 30 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:57,811,612...57,834,173
Ensembl chr15:57,813,356...57,834,173
JBrowse link
positive regulation of aspartate secretion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:2342602 RGD:10054058 NCBI chr10:7,093,406...7,200,439
Ensembl chr10:7,093,405...7,200,499
JBrowse link
G Slc12a2 solute carrier family 12 member 2 ISO (MGI:MGI:6392919|PMID:11940530) RGD PMID:11940530 MGI:MGI:6392919 NCBI chr18:52,917,124...52,985,281
Ensembl chr18:52,917,124...52,985,261
JBrowse link
succinate transmembrane transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc13a2 solute carrier family 13 member 2 ISO
IEA
(PMID:26176240)
GO_REF:0000107
(MGI:MGI:6436400|PMID:26176240)
RGD
Ensembl
PMID:26176240 GO_REF:0000107, MGI:MGI:6436400 NCBI chr10:65,664,665...65,692,046
Ensembl chr10:65,664,667...65,692,023
JBrowse link
G Slc13a3 solute carrier family 13 member 3 IDA
IEA
ISO
PMID:9920886
GO_REF:0000107
(MGI:MGI:6436400|PMID:26176240)
(PMID:10992006), (PMID:21264516), (PMID:24247155), (PMID:26176240)
Ensembl
RGD
PMID:10992006, PMID:21264516, PMID:24247155, PMID:26176240, PMID:9920886 GO_REF:0000107, MGI:MGI:6436400, RGD:634021 NCBI chr 3:162,084,336...162,147,398
Ensembl chr 3:162,084,315...162,147,393
JBrowse link
G Slc13a5 solute carrier family 13 member 5 IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:58,806,581...58,835,549
Ensembl chr10:58,810,058...58,834,538
JBrowse link
G Slc25a10 solute carrier family 25 member 10 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link
G Slc25a11 solute carrier family 25 member 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,265,903...57,268,018
Ensembl chr10:57,265,704...57,268,081
JBrowse link
G Slc25a14 solute carrier family 25 member 14 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:135,470,855...135,509,223
Ensembl chr  X:135,470,915...135,509,221
JBrowse link
G Slc25a30 solute carrier family 25, member 30 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:57,811,612...57,834,173
Ensembl chr15:57,813,356...57,834,173
JBrowse link
succinate transport term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc13a3 solute carrier family 13 member 3 IDA RGD PMID:12177002, PMID:15836629, PMID:10992006, PMID:16524379 RGD:633417, RGD:2303956, RGD:2303955, RGD:2303797 NCBI chr 3:162,084,336...162,147,398
Ensembl chr 3:162,084,315...162,147,393
JBrowse link
G Slc13a5 solute carrier family 13 member 5 IDA
ISO
(MGI:MGI:3033559|PMID:14656221) RGD PMID:14656221, PMID:16524379, PMID:12177002 MGI:MGI:3033559, RGD:2303797, RGD:633417 NCBI chr10:58,806,581...58,835,549
Ensembl chr10:58,810,058...58,834,538
JBrowse link
G Slc25a10 solute carrier family 25 member 10 IDA RGD PMID:9733776 RGD:634162 NCBI chr10:109,665,682...109,674,782
Ensembl chr10:109,665,682...109,673,143
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    localization 6478
      establishment of localization 4887
        transport 4735
          organic substance transport 2558
            organic anion transport 535
              carboxylic acid transport 369
                dicarboxylic acid transport 99
                  C4-dicarboxylate transport 27
                    D-aspartate transport + 6
                    L-aspartate transmembrane transport + 11
                    aspartate secretion + 2
                    aspartate transmembrane import into vacuole 0
                    aspartate transmembrane transport 10
                    fumarate transport 0
                    malate transport + 4
                    oxaloacetate transport + 4
                    succinate transport + 7
                    tartrate transmembrane transport 0
Path 2
Term Annotations click to browse term
  biological_process 20028
    localization 6478
      establishment of localization 4887
        transport 4735
          ion transport 1786
            anion transport 679
              organic anion transport 535
                carboxylic acid transport 369
                  dicarboxylic acid transport 99
                    C4-dicarboxylate transport 27
                      D-aspartate transport + 6
                      L-aspartate transmembrane transport + 11
                      aspartate secretion + 2
                      aspartate transmembrane import into vacuole 0
                      aspartate transmembrane transport 10
                      fumarate transport 0
                      malate transport + 4
                      oxaloacetate transport + 4
                      succinate transport + 7
                      tartrate transmembrane transport 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.