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ONTOLOGY REPORT - ANNOTATIONS


Term:organic cation transport
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Accession:GO:0015695 term browser browse the term
Definition:The directed movement of organic cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage.


show annotations for term's descendants           Sort by:
 
organic cation transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2rx7 purinergic receptor P2X 7 TAS RGD PMID:12422208 RGD:628349 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Slc22a1 solute carrier family 22 member 1 involved_in IDA
IBA
ISO
PMID:21873635
(PMID:22806583), (PMID:24291757)
RGD PMID:22806583 PMID:24291757, PMID:7990927, PMID:21873635 RGD:634159, RGD:13792537 NCBI chr 1:48,273,639...48,300,645
Ensembl chr 1:48,273,611...48,300,655
JBrowse link
G Slc22a16 solute carrier family 22 member 16 involved_in
acts_upstream_of_or_within
ISO (PMID:12089149)
(PMID:15963465)
RGD PMID:12089149 PMID:15963465 NCBI chr20:45,658,398...45,669,192 JBrowse link
G Slc22a2 solute carrier family 22 member 2 acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
(PMID:16024787)
(PMID:22806583), (PMID:23864433), (PMID:24291757), (PMID:9687576)
PMID:20924140
PMID:21873635
RGD PMID:9687576 PMID:16024787 PMID:22806583 PMID:23864433 PMID:24291757, PMID:19211691, PMID:20924140, PMID:21873635 RGD:2317436, RGD:30309940, RGD:13792537 NCBI chr 1:48,318,025...48,360,219
Ensembl chr 1:48,317,995...48,360,261
JBrowse link
G Slc22a3 solute carrier family 22 member 3 acts_upstream_of_or_within
involved_in
IDA
ISO
(PMID:10966924), (PMID:16024787)
(PMID:22806583), (PMID:24291757)
(MGI:1890056|PMID:10966924)
neurotoxin 1-methyl-4-phenylpyridinium
RGD PMID:10966924 PMID:16024787 PMID:22806583 PMID:24291757, PMID:9632645, PMID:12411423, PMID:9830022 MGI:1890056, RGD:70010, RGD:1643218, RGD:1643215 NCBI chr 1:48,433,079...48,521,261
Ensembl chr 1:48,433,079...48,521,256
JBrowse link
G Slc29a4 solute carrier family 29 member 4 involved_in ISO (PMID:26376205) RGD PMID:26376205 NCBI chr12:13,914,114...13,924,511
Ensembl chr12:13,914,114...13,924,531
JBrowse link
G Slc47a1 solute carrier family 47 member 1 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16928787, PMID:21873635 RGD:2316962, RGD:13792537 NCBI chr10:47,631,425...47,685,379
Ensembl chr10:47,632,192...47,666,921
JBrowse link
G Slc7a8 solute carrier family 7 member 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:33,369,245...33,428,942
Ensembl chr15:33,369,216...33,428,973
JBrowse link
(R)-carnitine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a5 solute carrier family 22 member 5 involved_in IMP
IEA
ISO
PMID:28257821
GO_REF:0000107
(MGI:6437032|PMID:14595704)
(PMID:23877104)
Ensembl
RGD
PMID:14595704 PMID:23877104, PMID:28257821 GO_REF:0000107 MGI:6437032, RGD:30309931 NCBI chr10:39,201,101...39,228,090
Ensembl chr10:39,201,107...39,323,853
JBrowse link
acetylcholine secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc44a4 solute carrier family 44, member 4 involved_in ISS
ISO
GO_REF:0000024
(PMID:23651124), (PMID:28013291)
UniProt
RGD
PMID:23651124 PMID:28013291 GO_REF:0000024 NCBI chr20:4,593,389...4,609,641
Ensembl chr20:4,593,389...4,609,631
JBrowse link
acetylcholine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl2 ADP-ribosylation factor like GTPase 2 IDA RGD PMID:9208929 RGD:68743 NCBI chr 1:221,504,150...221,516,191
Ensembl chr 1:221,504,170...221,516,110
JBrowse link
G Slc18a3 solute carrier family 18 member A3 IMP RGD PMID:15924414 RGD:2317426 NCBI chr16:8,682,668...8,685,529
Ensembl chr16:8,682,669...8,685,529
JBrowse link
AMP transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a17 solute carrier family 25 member 17 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:122,539,293...122,581,777
Ensembl chr 7:122,539,293...122,581,777
JBrowse link
G Slc25a42 solute carrier family 25, member 42 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:19429682)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:19429682 GO_REF:0000024 GO_REF:0000107 NCBI chr16:20,962,144...21,000,191
Ensembl chr16:20,962,227...20,985,225
JBrowse link
G Slc29a1 solute carrier family 29 member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:17,784,468...17,799,008
Ensembl chr 9:17,784,468...17,799,005
JBrowse link
carnitine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07029596.1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 Ensembl chr10:39,330,731...39,373,437 JBrowse link
G Slc22a4 solute carrier family 22 member 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:39,334,972...39,373,508 JBrowse link
G Slc25a20 solute carrier family 25 member 20 involved_in IDA PMID:9731180 RGD
UniProt
PMID:2223786, PMID:9731180 RGD:13440120, RGD:39458032 NCBI chr 8:117,455,308...117,476,762
Ensembl chr 8:117,455,262...117,476,734
JBrowse link
carnitine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdzk1 PDZ domain containing 1 involved_in ISO (PMID:15523054) RGD PMID:15523054 NCBI chr 2:198,965,685...198,999,323
Ensembl chr 2:198,965,685...198,999,323
JBrowse link
G Slc22a16 solute carrier family 22 member 16 involved_in
acts_upstream_of_or_within
ISO (PMID:12089149) RGD PMID:12089149 NCBI chr20:45,658,398...45,669,192 JBrowse link
G Slc22a4 solute carrier family 22 member 4 acts_upstream_of_or_within ISO (MGI:1928404|PMID:11010964)
(PMID:16729965)
RGD PMID:11010964 PMID:16729965 MGI:1928404 NCBI chr10:39,334,972...39,373,508 JBrowse link
G Slc22a5 solute carrier family 22 member 5 acts_upstream_of_or_within
involved_in
IDA
ISO
IMP
MGI:1856926 (MGI:1206151|PMID:9634010), (MGI:1327457|PMID:9916797), (MGI:1338996|PMID:10087008), (MGI:1351704|PMID:10498652), (MGI:1928404|PMID:11010964), (MGI:66711|PMID:8155735), (MGI:81093|PMID:8670273)
(PMID:9685390), (PMID:9916797)
sodium-dependent
RGD PMID:8155735 PMID:8670273 PMID:9634010 PMID:9685390 PMID:9916797 PMID:10087008 PMID:10498652 PMID:11010964, PMID:9792817, PMID:10636865, PMID:12644265, PMID:15923388, PMID:16322553 MGI:1206151 MGI:1327457 MGI:1338996 MGI:1351704 MGI:1928404 MGI:66711 MGI:81093, RGD:730132, RGD:1643135, RGD:1643141, RGD:1643142, RGD:1643150 NCBI chr10:39,201,101...39,228,090
Ensembl chr10:39,201,107...39,323,853
JBrowse link
G Slc25a29 solute carrier family 25 member 29 NOT|involved_in ISO
ISS
(PMID:24652292)
GO_REF:0000024
RGD
UniProt
PMID:24652292 GO_REF:0000024 NCBI chr 6:132,736,964...132,747,912
Ensembl chr 6:132,735,883...132,747,828
JBrowse link
choline transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psen1 presenilin 1 acts_upstream_of_or_within ISO MGI:1930937 (MGI:3698892|PMID:17196556) RGD PMID:17196556 MGI:3698892 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Scn4a sodium voltage-gated channel alpha subunit 4 IMP RGD PMID:20926383 RGD:7243169 NCBI chr10:94,505,026...94,557,803
Ensembl chr10:94,505,026...94,557,764
JBrowse link
G Sec14l1 SEC14-like lipid binding 1 involved_in ISO (PMID:17092608) RGD PMID:17092608 NCBI chr10:106,065,712...106,112,859
Ensembl chr10:106,065,712...106,112,857
JBrowse link
G Slc22a2 solute carrier family 22 member 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:9687576)
Ensembl
RGD
PMID:9687576 GO_REF:0000107 NCBI chr 1:48,318,025...48,360,219
Ensembl chr 1:48,317,995...48,360,261
JBrowse link
G Slc44a1 solute carrier family 44 member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
IMP
PMID:21873635
(MGI:6383289|PMID:19519661)
(MGI:3055690|PMID:15474312)
GO_REF:0000107
(PMID:16319125), (PMID:20410607)
RGD
Ensembl
PMID:15474312 PMID:16319125 PMID:19519661 PMID:20410607, PMID:21873635, PMID:19519661 GO_REF:0000107 MGI:3055690 MGI:6383289, RGD:13792537, RGD:15090833 NCBI chr 5:70,243,643...70,424,115
Ensembl chr 5:70,245,843...70,424,112
JBrowse link
G Slc44a2 solute carrier family 44 member 2 involved_in IBA
ISO
PMID:21873635
(PMID:20410607)
RGD PMID:20410607, PMID:21873635 RGD:13792537 NCBI chr 8:22,351,277...22,385,869
Ensembl chr 8:22,368,745...22,385,864
JBrowse link
G Slc44a4 solute carrier family 44, member 4 involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:23651124), (PMID:28013291)
UniProt
RGD
PMID:23651124 PMID:28013291, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:4,593,389...4,609,641
Ensembl chr20:4,593,389...4,609,631
JBrowse link
G Slc5a7 solute carrier family 5 member 7 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
MGI:3045463 (MGI:3044863|PMID:15173594), (MGI:3698892|PMID:17196556)
GO_REF:0000107
RGD
Ensembl
PMID:15173594 PMID:17196556, PMID:21873635 GO_REF:0000107 MGI:3044863 MGI:3698892, RGD:13792537 NCBI chr 9:5,294,377...5,330,822
Ensembl chr 9:5,294,381...5,330,815
JBrowse link
G Slc6a8 solute carrier family 6 member 8 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:157,129,987...157,139,321
Ensembl chr  X:157,129,987...157,139,291
JBrowse link
daunorubicin transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IMP RGD PMID:22035293 RGD:8657094 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
doxorubicin transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ralbp1 ralA binding protein 1 involved_in ISO (PMID:10924126) RGD PMID:10924126 NCBI chr 9:113,579,107...113,598,477
Ensembl chr 9:113,579,107...113,598,480
JBrowse link
glycine betaine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc38a2 solute carrier family 38, member 2 IDA RGD PMID:24434061 RGD:9999215 NCBI chr 7:138,088,654...138,100,869
Ensembl chr 7:138,088,649...138,100,841
JBrowse link
negative regulation of acetylcholine secretion, neurotransmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htr6 5-hydroxytryptamine receptor 6 IMP RGD PMID:16987217 RGD:2317005 NCBI chr 5:157,501,202...157,518,870
Ensembl chr 5:157,503,040...157,518,631
JBrowse link
positive regulation of acetylcholine secretion, neurotransmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2a adenosine A2a receptor IMP phrenic nerve terminals in the presence of adenosine transport inhibitor deoxycoformycin RGD PMID:12679375 RGD:1625693 NCBI chr20:14,265,251...14,282,873
Ensembl chr20:14,265,252...14,282,873
JBrowse link
G Htr2c 5-hydroxytryptamine receptor 2C IMP RGD PMID:15266551 RGD:1625007 NCBI chr  X:118,084,520...118,318,040
Ensembl chr  X:118,084,890...118,318,039
JBrowse link
G Tacr2 tachykinin receptor 2 IMP RGD PMID:12747940 RGD:5147477 NCBI chr20:31,892,515...31,905,153
Ensembl chr20:31,892,515...31,905,153
JBrowse link
putrescine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a3 ATPase 13A3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:73,936,750...73,963,852
Ensembl chr11:73,936,750...73,963,852
JBrowse link
regulation of acetylcholine secretion, neurotransmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A acts_upstream_of_or_within ISO MGI:1856209|MGI:2181384 (MGI:2654957|PMID:12624181), (MGI:3606714|PMID:10686170) RGD PMID:10686170 PMID:12624181 MGI:2654957 MGI:3606714 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550
JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit acts_upstream_of_or_within ISO MGI:2155602 (MGI:3590443|PMID:16162937) RGD PMID:16162937 MGI:3590443 NCBI chr 8:59,594,007...59,607,122
Ensembl chr 8:59,592,403...59,607,275
JBrowse link
S-adenosyl-L-methionine transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a26 solute carrier family 25 member 26 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:126,522,335...126,615,402
Ensembl chr 4:126,522,326...126,615,314
JBrowse link
S-adenosyl-L-methionine transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a26 solute carrier family 25 member 26 involved_in ISO (PMID:14674884) RGD PMID:14674884 NCBI chr 4:126,522,335...126,615,402
Ensembl chr 4:126,522,326...126,615,314
JBrowse link
sodium-dependent organic cation transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc22a5 solute carrier family 22 member 5 involved_in ISO
IEA
(PMID:15238359), (PMID:9685390)
GO_REF:0000107
RGD
Ensembl
PMID:9685390 PMID:15238359 GO_REF:0000107 NCBI chr10:39,201,101...39,228,090
Ensembl chr10:39,201,107...39,323,853
JBrowse link
thiamine pyrophosphate transmembrane transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07005723.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 1:195,440,312...195,441,253 JBrowse link
G RGD1561206 similar to solute carrier family 25 (mitochondrial deoxynucleotide carrier), member 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:195,439,875...195,441,353 JBrowse link
G Slc25a19 solute carrier family 25 member 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:104,166,594...104,179,523
Ensembl chr10:104,166,598...104,179,523
JBrowse link
G Slc44a4 solute carrier family 44, member 4 involved_in ISO
ISS
IBA
(PMID:24379411)
(MGI:5902675|PMID:24379411)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:24379411, PMID:21873635 GO_REF:0000024 MGI:5902675, RGD:13792537 NCBI chr20:4,593,389...4,609,641
Ensembl chr20:4,593,389...4,609,631
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    localization 6443
      establishment of localization 4862
        transport 4698
          organic substance transport 2477
            organic cation transport 41
              4-(trimethylammonio)butanoate transport 0
              5-aminolevulinic acid import across plasma membrane 0
              AMP transport 3
              N-methylnicotinate transport 0
              S-adenosyl-L-methionine transport + 1
              acetylcholine transport + 9
              cadaverine transport 0
              carnitine transport + 7
              choline transport 9
              daunorubicin transport 1
              doxorubicin transport 1
              ethanolamine transport 0
              glycine betaine transport 1
              octopamine secretion + 0
              putrescine transport 1
              pyridoxal transport + 0
              pyridoxamine transport + 0
              sodium-dependent organic cation transport 1
              spermidine transport + 0
              sphingoid long-chain base transport 0
              thiamine pyrophosphate transmembrane transport + 4
Path 2
Term Annotations click to browse term
  biological_process 19491
    localization 6443
      establishment of localization 4862
        transport 4698
          ion transport 1637
            cation transport 1258
              organic cation transport 41
                4-(trimethylammonio)butanoate transport 0
                5-aminolevulinic acid import across plasma membrane 0
                AMP transport 3
                N-methylnicotinate transport 0
                S-adenosyl-L-methionine transport + 1
                acetylcholine transport + 9
                cadaverine transport 0
                carnitine transport + 7
                choline transport 9
                daunorubicin transport 1
                doxorubicin transport 1
                ethanolamine transport 0
                glycine betaine transport 1
                octopamine secretion + 0
                putrescine transport 1
                pyridoxal transport + 0
                pyridoxamine transport + 0
                sodium-dependent organic cation transport 1
                spermidine transport + 0
                sphingoid long-chain base transport 0
                thiamine pyrophosphate transmembrane transport + 4
paths to the root