Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS
Term:organic cation transmembrane transporter activity
go back to main search page
Accession:GO:0015101 term browser browse the term
Definition:Enables the transfer of organic cations from one side of a membrane to the other. Organic cations are atoms or small molecules with a positive charge that contain carbon in covalent linkage.
Synonyms:xref: reactome:R-HSA-2161500 "abacavir [extracellular] => abacavir [cytosol]";   reactome:R-HSA-549129 "OCT1 transports organic cations into hepatic cells";   reactome:R-HSA-549279 "OCT2 mediates tubular uptake of organic cations in the kidney";   reactome:R-HSA-549304 "OCT3 mediates renal clearance of organic cations";   reactome:R-HSA-549322 "OCT1 transports organic cations out of hepatic cells";   reactome:R-HSA-561054 "OCT2 mediates tubular secretion of organic cations in the kidney";   reactome:R-HSA-561072 "OCT3 mediates renal uptake of organic cations"

show annotations for term's descendants       view all columns           Sort by:
 
organic cation transmembrane transporter activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc22a1 solute carrier family 22 member 1 JBrowse link 1 48,273,639 48,300,645 RGD:634159
RGD:13792537
RGD:7243886
RGD:1624291
G Slc22a16 solute carrier family 22 member 16 JBrowse link 20 45,658,398 45,669,192 RGD:1624291
G Slc22a2 solute carrier family 22 member 2 JBrowse link 1 48,318,025 48,360,219 RGD:1624291
RGD:13792537
RGD:1600115
RGD:7243886
G Slc22a3 solute carrier family 22 member 3 JBrowse link 1 48,433,079 48,521,261 RGD:70010
RGD:13792537
RGD:1624291
G Slc22a4 solute carrier family 22 member 4 JBrowse link 10 39,334,972 39,373,508 RGD:633351
G Slc7a8 solute carrier family 7 member 8 JBrowse link 15 33,369,245 33,428,942 RGD:1624291
RGD:1600115
acetylcholine transmembrane transporter activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc18a3 solute carrier family 18 member A3 JBrowse link 16 8,682,668 8,685,529 RGD:61752
RGD:13792537
G Slc22a1 solute carrier family 22 member 1 JBrowse link 1 48,273,639 48,300,645 RGD:2317432
acyl carnitine transmembrane transporter activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc25a20 solute carrier family 25 member 20 JBrowse link 8 117,455,308 117,476,762 RGD:1624291
G Slc25a29 solute carrier family 25 member 29 JBrowse link 6 132,736,964 132,747,912 RGD:1624291
RGD:13792537
RGD:1600115
G Slc25a45 solute carrier family 25, member 45 JBrowse link 1 221,236,817 221,244,564 RGD:13792537
G Slc25a47 solute carrier family 25, member 47 JBrowse link 6 132,762,306 132,767,940 RGD:13792537
G Slc25a48 solute carrier family 25, member 48 JBrowse link 17 8,567,014 8,608,213 RGD:13792537
AMP transmembrane transporter activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc25a17 solute carrier family 25 member 17 JBrowse link 7 122,539,293 122,581,777 RGD:1624291
RGD:13792537
G Slc25a42 solute carrier family 25, member 42 JBrowse link 16 20,962,144 21,000,191 RGD:1600115
RGD:1624291
carnitine transmembrane transporter activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc22a16 solute carrier family 22 member 16 JBrowse link 20 45,658,398 45,669,192 RGD:1624291
G Slc22a4 solute carrier family 22 member 4 JBrowse link 10 39,334,972 39,373,508 RGD:1624291
G Slc22a5 solute carrier family 22 member 5 JBrowse link 10 39,201,101 39,228,090 RGD:730132
RGD:1624291
RGD:1643150
RGD:1643142
RGD:1643141
RGD:1643135
choline transmembrane transporter activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc22a2 solute carrier family 22 member 2 JBrowse link 1 48,318,025 48,360,219 RGD:628453
G Slc44a1 solute carrier family 44 member 1 JBrowse link 5 70,243,643 70,424,115 RGD:1624291
RGD:1600115
G Slc44a4 solute carrier family 44, member 4 JBrowse link 20 4,593,389 4,609,641 RGD:1624291
RGD:1600115
G Slc5a7 solute carrier family 5 member 7 JBrowse link 9 5,294,377 5,330,822 RGD:68853
RGD:1624291
G Slc6a8 solute carrier family 6 member 8 JBrowse link X 157,129,987 157,139,321 RGD:634748
RGD:13792537
RGD:737698
choline:sodium symporter activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc5a7 solute carrier family 5 member 7 JBrowse link 9 5,294,377 5,330,822 RGD:1624291
RGD:13792537
RGD:1600115
putrescine transmembrane transporter activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Azin2 antizyme inhibitor 2 JBrowse link 5 147,120,128 147,148,576 RGD:1600115
RGD:1624291
G Oaz3 ornithine decarboxylase antizyme 3 JBrowse link 2 195,675,925 195,678,859 RGD:1624291
quaternary ammonium group transmembrane transporter activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc22a1 solute carrier family 22 member 1 JBrowse link 1 48,273,639 48,300,645 RGD:1643122
RGD:1643126
RGD:1643123
G Slc22a2 solute carrier family 22 member 2 JBrowse link 1 48,318,025 48,360,219 RGD:1643123
G Slc22a3 solute carrier family 22 member 3 JBrowse link 1 48,433,079 48,521,261 RGD:70010
RGD:1624291
G Slc22a4 solute carrier family 22 member 4 JBrowse link 10 39,334,972 39,373,508 RGD:633351
RGD:13792537
RGD:1624291
RGD:1643126
G Slc22a5 solute carrier family 22 member 5 JBrowse link 10 39,201,101 39,228,090 RGD:70011
RGD:13792537
RGD:1624291
RGD:1643141
RGD:1643135
RGD:1643126
G Slc22a8 solute carrier family 22 member 8 JBrowse link 1 224,799,444 224,818,482 RGD:1643126
secondary active organic cation transmembrane transporter activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc22a1 solute carrier family 22 member 1 JBrowse link 1 48,273,639 48,300,645 RGD:634159
thiamine pyrophosphate transmembrane transporter activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc44a4 solute carrier family 44, member 4 JBrowse link 20 4,593,389 4,609,641 RGD:1624291
RGD:1600115
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 18263
    transporter activity 1190
      transmembrane transporter activity 1054
        ion transmembrane transporter activity 863
          cation transmembrane transporter activity 635
            organic cation transmembrane transporter activity 22
              AMP transmembrane transporter activity 2
              ATPase-coupled betaine transporter activity 0
              ATPase-coupled daunorubicin transmembrane transporter activity 0
              ATPase-coupled doxorubicin transmembrane transporter activity 0
              acetylcholine transmembrane transporter activity + 2
              acriflavine transmembrane transporter activity 0
              amiloride transmembrane transporter activity + 0
              arginine:agmatine antiporter activity 0
              choline transmembrane transporter activity + 5
              ethanolamine transmembrane transporter activity 0
              lysine:cadaverine antiporter activity 0
              methylammonium transmembrane transporter activity + 0
              putrescine transmembrane transporter activity + 2
              pyridoxal transmembrane transporter activity 0
              pyridoxamine transmembrane transporter activity 0
              quaternary ammonium group transmembrane transporter activity + 12
              secondary active organic cation transmembrane transporter activity 1
              spermidine transmembrane transporter activity + 0
              thiamine pyrophosphate transmembrane transporter activity 1
paths to the root

Contact Us |  About Us |  License CC BY 4.0 |  Legal Disclaimer |  © Medical College of Wisconsin
NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.