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ONTOLOGY REPORT - ANNOTATIONS


Term:heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
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Accession:GO:0015014 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan.
Synonyms:exact_synonym: heparan sulfate proteoglycan anabolism, polysaccharide chain anabolism;   heparan sulfate proteoglycan chain elongation;   heparan sulfate proteoglycan formation, polysaccharide chain biosynthesis;   heparan sulfate proteoglycan formation, polysaccharide chain formation;   heparan sulfate proteoglycan synthesis, polysaccharide chain synthesis;   heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis;   heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process
 related_synonym: heparin proteoglycan biosynthetic process, polysaccharide chain biosynthetic process


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heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,809...20,935,564
JBrowse link
G EXT2 exostosin glycosyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:18,099,790...18,239,229
Ensembl chr 2:18,100,379...18,232,025
JBrowse link
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2150438|PMID:11457822)
GO_Central
MGI
PMID:11457822 PMID:21873635 MGI:2150438 NCBI chr 4:129,101,900...129,258,372 JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:151,433,925...151,525,909
Ensembl chr 2:151,489,521...151,522,751
JBrowse link
G NDST2 N-deacetylase and N-sulfotransferase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:76,525,998...76,534,695 JBrowse link
G NDST3 N-deacetylase and N-sulfotransferase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:105,221,344...105,370,067
Ensembl chr 8:105,221,348...105,370,019
JBrowse link
G NDST4 N-deacetylase and N-sulfotransferase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:107,882,088...108,129,785
Ensembl chr 8:107,910,973...108,123,325
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16574
    metabolic process 10411
      biosynthetic process 5331
        cellular biosynthetic process 5182
          cellular carbohydrate biosynthetic process 83
            cellular polysaccharide biosynthetic process 70
              heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process 7
Path 2
Term Annotations click to browse term
  biological_process 16574
    metabolic process 10411
      organic substance metabolic process 9976
        macromolecule metabolic process 8636
          cellular macromolecule metabolic process 7298
            cellular macromolecule biosynthetic process 4337
              glycoprotein biosynthetic process 288
                proteoglycan biosynthetic process 52
                  heparan sulfate proteoglycan biosynthetic process 22
                    heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process 7
paths to the root