Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
go back to main search page
Accession:GO:0015014 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan.
Synonyms:exact_synonym: heparan sulfate proteoglycan anabolism, polysaccharide chain anabolism;   heparan sulfate proteoglycan chain elongation;   heparan sulfate proteoglycan formation, polysaccharide chain biosynthesis;   heparan sulfate proteoglycan formation, polysaccharide chain formation;   heparan sulfate proteoglycan synthesis, polysaccharide chain synthesis;   heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis;   heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process
 related_synonym: heparin proteoglycan biosynthetic process, polysaccharide chain biosynthetic process


show annotations for term's descendants           Sort by:
 
heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 involved_in ISO (PMID:17761672) RGD PMID:17761672 NCBI chr 7:92,605,008...92,881,392
Ensembl chr 7:92,605,728...92,882,068
JBrowse link
G Ext2 exostosin glycosyltransferase 2 involved_in ISO (PMID:17761672) RGD PMID:17761672 NCBI chr 3:82,602,784...82,734,557
Ensembl chr 3:82,602,785...82,734,533
JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1934916 (MGI:2150438|PMID:11457822)
RGD PMID:11457822, PMID:21873635 MGI:2150438, RGD:13792537 NCBI chr 2:250,467,428...250,600,517
Ensembl chr 2:250,467,429...250,600,517
JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:55,951,497...56,014,107
Ensembl chr18:55,955,389...55,992,885
JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:3,995,797...4,006,491
Ensembl chr15:3,996,048...4,006,491
Ensembl chr15:3,996,048...4,006,491
JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 involved_in IBA
ISO
PMID:21873635
(PMID:9915799)
RGD PMID:9915799, PMID:21873635 RGD:13792537 NCBI chr 2:227,736,491...227,903,657
Ensembl chr 2:227,738,650...227,890,077
JBrowse link
G Ndst4 N-deacetylase and N-sulfotransferase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:229,170,781...229,496,732
Ensembl chr 2:229,196,616...229,496,516
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    metabolic process 11882
      biosynthetic process 6187
        cellular biosynthetic process 6031
          cellular carbohydrate biosynthetic process 85
            cellular polysaccharide biosynthetic process 71
              heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process 7
Path 2
Term Annotations click to browse term
  biological_process 19612
    metabolic process 11882
      organic substance metabolic process 11417
        macromolecule metabolic process 9873
          cellular macromolecule metabolic process 8318
            cellular macromolecule biosynthetic process 5053
              glycoprotein biosynthetic process 295
                proteoglycan biosynthetic process 53
                  heparan sulfate proteoglycan biosynthetic process 22
                    heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process 7
paths to the root