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ONTOLOGY REPORT - ANNOTATIONS


Term:heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
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Accession:GO:0015014 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of polysaccharide chain component of heparan sulfate proteoglycan.
Synonyms:exact_synonym: heparan sulfate proteoglycan anabolism, polysaccharide chain anabolism;   heparan sulfate proteoglycan chain elongation;   heparan sulfate proteoglycan formation, polysaccharide chain biosynthesis;   heparan sulfate proteoglycan formation, polysaccharide chain formation;   heparan sulfate proteoglycan synthesis, polysaccharide chain synthesis;   heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis;   heparan sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process
 related_synonym: heparin proteoglycan biosynthetic process, polysaccharide chain biosynthetic process



show annotations for term's descendants           Sort by:
heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 involved_in ISO (PMID:17761672) RGD PMID:17761672 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Ext2 exostosin glycosyltransferase 2 involved_in ISO (PMID:17761672) RGD PMID:17761672 NCBI chr 3:79,665,415...79,798,077
Ensembl chr 3:79,665,415...79,798,059
JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1934916 (MGI:2150438|PMID:11457822)
RGD PMID:11457822 PMID:21873635 MGI:2150438, RGD:13792537 NCBI chr 2:233,508,018...233,641,769
Ensembl chr 2:233,508,021...233,641,769
JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IDA
ISO
IBA
PMID:1379236
PMID:8483907
(PMID:10758005)
(MGI:6870964|PMID:10758005)
PMID:21873635
RGD PMID:10758005 PMID:1379236 PMID:8483907 PMID:21873635 MGI:6870964, RGD:68801, RGD:151356652, RGD:13792537 NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191
JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:10758005)
(MGI:6870964|PMID:10758005)
PMID:21873635
RGD PMID:10758005 PMID:21873635 MGI:6870964, RGD:13792537 NCBI chr15:3,563,358...3,573,801
Ensembl chr15:3,563,358...3,573,801
JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 involved_in ISO
IBA
(PMID:9915799)
PMID:21873635
RGD PMID:9915799 PMID:21873635 RGD:13792537 NCBI chr 2:211,702,728...211,868,159
Ensembl chr 2:211,704,898...211,854,584
JBrowse link
G Ndst4 N-deacetylase and N-sulfotransferase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:213,787,010...214,116,569
Ensembl chr 2:213,787,006...214,115,373
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19898
    metabolic process 12211
      primary metabolic process 10967
        carbohydrate metabolic process 617
          polysaccharide metabolic process 107
            polysaccharide biosynthetic process 67
              heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process 7
Path 2
Term Annotations click to browse term
  biological_process 19898
    metabolic process 12211
      organic substance metabolic process 11752
        organonitrogen compound metabolic process 7049
          protein metabolic process 6117
            glycoprotein metabolic process 396
              proteoglycan metabolic process 97
                proteoglycan biosynthetic process 64
                  heparan sulfate proteoglycan biosynthetic process 30
                    heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process 7
paths to the root