Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:myotube cell development
go back to main search page
Accession:GO:0014904 term browser browse the term
Definition:The process aimed at the progression of a myotube cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.


show annotations for term's descendants           Sort by:
 
myotube cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmd dystrophin acts_upstream_of_or_within ISO (MGI:3849772|PMID:19535499) MGI PMID:19535499 MGI:3849772 NCBI chrNW_004936553:7,157,526...7,943,703 JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:17531227) BHF-UCL PMID:17531227 NCBI chrNW_004936492:11,709,623...11,784,028 JBrowse link
G LOC101976824 nuclear factor of activated T cells 2 acts_upstream_of_or_within ISO (MGI:3821556|PMID:18676376) MGI PMID:18676376 MGI:3821556 NCBI chrNW_004936514:3,453,475...3,579,292 JBrowse link
G Myod1 myogenic differentiation 1 involved_in ISO (PMID:10672515) BHF-UCL PMID:10672515 NCBI chrNW_004936528:1,407,187...1,409,683 JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:3821556|PMID:18676376) MGI PMID:18676376 MGI:3821556 NCBI chrNW_004936475:18,462,424...18,557,832 JBrowse link
G Smyd3 SET and MYND domain containing 3 acts_upstream_of_or_within ISO (MGI:5500979|PMID:23752591) MGI PMID:23752591 MGI:5500979 NCBI chrNW_004936526:4,536,157...5,218,883 JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (MGI:5605930|PMID:25014022) MGI PMID:25014022 MGI:5605930 NCBI chrNW_004936724:1,747,015...1,780,298 JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) UniProt PMID:18178581 MGI:3778600 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:1928555|PMID:11146504) MGI PMID:11146504 MGI:1928555 NCBI chrNW_004936497:2,209,136...2,373,580 JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (PMID:25250574) UniProt PMID:25250574 NCBI chrNW_004936603:1,510,330...1,520,741 JBrowse link
G Myog myogenin involved_in ISO (MGI:62381|PMID:8393145) UniProt PMID:8393145 MGI:62381 NCBI chrNW_004936567:1,507,042...1,509,814 JBrowse link
G Shox2 short stature homeobox 2 involved_in ISO (MGI:4946446|PMID:21156168) BHF-UCL PMID:21156168 MGI:4946446 NCBI chrNW_004936519:4,810,777...4,818,733 JBrowse link
regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chrNW_004936471:36,232,749...36,255,772 JBrowse link
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chrNW_004936745:1,730,743...1,942,071 JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chrNW_004936541:561,721...598,915 JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO (MGI:3763703|PMID:17786239) MGI PMID:17786239 MGI:3763703 NCBI chrNW_004936546:4,398,003...5,247,649 JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chrNW_004936646:1,017,491...1,030,130 JBrowse link
skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin alpha 1, skeletal muscle involved_in ISO (MGI:78319|PMID:2731651) UniProt PMID:2731651 MGI:78319 NCBI chrNW_004936484:20,236,320...20,239,385 JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO (MGI:66718|PMID:8143864)
(MGI:3630139|PMID:289331), (MGI:53207|PMID:8462749)
MGI PMID:289331 PMID:8143864 PMID:8462749 MGI:3630139 MGI:53207 MGI:66718 NCBI chrNW_004936567:3,269,283...3,331,858 JBrowse link
G Cav2 caveolin 2 acts_upstream_of_or_within ISO (MGI:3695802|PMID:17200204) MGI PMID:17200204 MGI:3695802 NCBI chrNW_004936589:2,553,932...2,561,186 JBrowse link
G Dner delta/notch like EGF repeat containing acts_upstream_of_or_within ISO (MGI:3583881|PMID:15965470) MGI PMID:15965470 MGI:3583881 NCBI chrNW_004936525:6,734,924...7,037,947 JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within ISO (MGI:3662804|PMID:16962942) MGI PMID:16962942 MGI:3662804 NCBI chrNW_004936529:997,943...999,123 JBrowse link
G Homer1 homer scaffold protein 1 acts_upstream_of_or_within ISO (MGI:3784629|PMID:18268005) MGI PMID:18268005 MGI:3784629 NCBI chrNW_004936549:7,189,588...7,320,117 JBrowse link
G Kel Kell metallo-endopeptidase (Kell blood group) acts_upstream_of_or_within ISO (MGI:5550316|PMID:24405768) MGI PMID:24405768 MGI:5550316 NCBI chrNW_004936527:406,061...431,142 JBrowse link
G Klhl40 kelch like family member 40 acts_upstream_of_or_within
involved_in
ISO (MGI:5586592|PMID:24960163)
(MGI:5700633|PMID:25940086)
MGI
UniProt
PMID:24960163 PMID:25940086 MGI:5586592 MGI:5700633 NCBI chrNW_004936695:2,417,938...2,424,622 JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (MGI:5644091|PMID:25774500), (MGI:5648755|PMID:26035871) UniProt PMID:25774500 PMID:26035871 MGI:5644091 MGI:5648755 NCBI chrNW_004936603:1,510,330...1,520,741 JBrowse link
G LOC101957084 plectin involved_in ISO (MGI:3797705|PMID:18490514)
(MGI:5567855|PMID:24487589)
MGI PMID:18490514 PMID:24487589 MGI:3797705 MGI:5567855 NCBI chrNW_004936470:8,194,124...8,252,139 JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:3840749 NCBI chrNW_004936528:1,407,187...1,409,683 JBrowse link
G Myog myogenin acts_upstream_of_or_within ISO (MGI:62381|PMID:8393145) MGI PMID:8393145 MGI:62381 NCBI chrNW_004936567:1,507,042...1,509,814 JBrowse link
G Myorg myogenesis regulating glycosidase (putative) involved_in ISO (PMID:19706595) UniProt PMID:19706595 NCBI chrNW_004936524:2,472,611...2,494,478 JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:1933051|PMID:11254352) MGI PMID:11254352 MGI:1933051 NCBI chrNW_004936475:18,462,424...18,557,832 JBrowse link
G P2rx2 purinergic receptor P2X 2 acts_upstream_of_or_within ISO (MGI:3766888|PMID:17706883) MGI PMID:17706883 MGI:3766888 NCBI chrNW_004936660:2,570,627...2,574,081 JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:3586394|PMID:16024798) MGI PMID:16024798 MGI:3586394 NCBI chrNW_004936520:1,987,989...2,146,473 JBrowse link
G Rcan1 regulator of calcineurin 1 acts_upstream_of_or_within ISO (MGI:3586394|PMID:16024798) MGI PMID:16024798 MGI:3586394 NCBI chrNW_004936500:7,942,099...7,950,256 JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISO (MGI:3764002|PMID:18003898) UniProt PMID:18003898 MGI:3764002 NCBI chrNW_004936801:1,185,615...1,298,416 JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within ISO (MGI:5494499|PMID:23325319) MGI PMID:23325319 MGI:5494499 NCBI chrNW_004936474:10,381,646...10,396,638 JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:1095997|PMID:9284043) MGI PMID:9284043 MGI:1095997 NCBI chrNW_004936737:1,223,653...1,274,664 JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (MGI:5438143|PMID:22987639) MGI PMID:22987639 MGI:5438143 NCBI chrNW_004936579:5,893,064...5,917,021 JBrowse link
G Stac3 SH3 and cysteine rich domain 3 acts_upstream_of_or_within ISO (MGI:5508972|PMID:23626854) MGI PMID:23626854 MGI:5508972 NCBI chrNW_004936646:1,436,505...1,444,712 JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:3581945 NCBI chrNW_004936512:6,768,240...6,774,172 JBrowse link
G Xk X-linked Kx blood group acts_upstream_of_or_within ISO (MGI:5550316|PMID:24405768) MGI PMID:24405768 MGI:5550316 NCBI chrNW_004936502:4,532,100...4,584,931 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12131
    developmental process 5711
      anatomical structure development 5339
        cell development 2144
          muscle cell development 190
            myotube cell development 37
              myotube cell development involved in skeletal muscle regeneration 0
              skeletal muscle fiber development + 33
Path 2
Term Annotations click to browse term
  biological_process 12131
    developmental process 5711
      cellular developmental process 3716
        cell differentiation 3653
          muscle cell differentiation 392
            striated muscle cell differentiation 293
              myotube differentiation 122
                myotube cell development 37
                  myotube cell development involved in skeletal muscle regeneration 0
                  skeletal muscle fiber development + 33
paths to the root