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ONTOLOGY REPORT - ANNOTATIONS


Term:myotube differentiation
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Accession:GO:0014902 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.



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myotube differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd2 ankyrin repeat domain 2 acts_upstream_of ISO (MGI:3796961|PMID:18302940), (MGI:5527051|PMID:23824195) RGD PMID:18302940 PMID:23824195 MGI:3796961 MGI:5527051 NCBI chr 1:240,847,111...240,856,563
Ensembl chr 1:240,847,072...240,856,566
JBrowse link
G Avpr1a arginine vasopressin receptor 1A IEP RGD PMID:18021262 RGD:2300341 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215
JBrowse link
G Barx2 BARX homeobox 2 acts_upstream_of_or_within ISO (MGI:2651740|PMID:12486129) RGD PMID:12486129 MGI:2651740 NCBI chr 8:30,251,132...30,319,105
Ensembl chr 8:30,251,132...30,319,013
JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within ISO (MGI:4946902|PMID:21182936)
MGI:2180558 (MGI:3761450|PMID:14517320)
RGD PMID:14517320 PMID:21182936 MGI:3761450 MGI:4946902 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within ISO MGI:2158814 (MGI:3662804|PMID:16962942), (MGI:3687062|PMID:12368211) RGD PMID:12368211 PMID:16962942 MGI:3662804 MGI:3687062 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO MGI:98573 (MGI:3522557|PMID:15282335) RGD PMID:15282335 MGI:3522557 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 acts_upstream_of_or_within ISO MGI:97276 (MGI:5319048|PMID:22106411) RGD PMID:22106411 MGI:5319048 NCBI chr17:77,081,508...77,106,114
Ensembl chr17:77,083,740...77,106,073
JBrowse link
G Hdac6 histone deacetylase 6 acts_upstream_of_or_within ISO (MGI:5315068|PMID:22174839) RGD PMID:22174839 MGI:5315068 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441
JBrowse link
G Ins2 insulin 2 acts_upstream_of_or_within ISO MGI:1861437|MGI:98953 (MGI:3522557|PMID:15282335) RGD PMID:15282335 MGI:3522557 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
IEA
(PMID:8455629)
GO_REF:0000107
RGD
Ensembl
PMID:8455629 GO_REF:0000107 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1857655 (MGI:76093|PMID:7651534) RGD PMID:7651534 MGI:76093 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (MGI:5300631|PMID:22147266) RGD PMID:22147266 MGI:5300631 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myef2 myelin expression factor 2 involved_in ISO (PMID:8455629) RGD PMID:8455629 NCBI chr 3:112,338,241...112,374,122
Ensembl chr 3:112,338,241...112,374,181
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (MGI:5604145|PMID:9234731) RGD PMID:9234731 MGI:5604145 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin acts_upstream_of_or_within IMP
ISO
MGI:1353592 (MGI:5319048|PMID:22106411) RGD PMID:22106411 PMID:1696254 MGI:5319048, RGD:9686131 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO (MGI:5469800|PMID:23206701) RGD PMID:23206701 MGI:5469800 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G Pld3 phospholipase D family, member 3 involved_in ISO
ISS
(PMID:22428023)
GO_REF:0000024
RGD
UniProt
PMID:22428023 GO_REF:0000024 NCBI chr 1:82,821,863...82,844,280
Ensembl chr 1:82,821,875...82,844,072
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796|MGI:1861186 (MGI:1929969|PMID:11171399) RGD PMID:11171399 MGI:1929969 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Ski Ski proto-oncogene involved_in
acts_upstream_of_or_within
ISO (PMID:19008232)
MGI:102780|MGI:109339 (MGI:3762994|PMID:17352741), (MGI:3839724|PMID:19008232)
RGD PMID:17352741 PMID:19008232 MGI:3762994 MGI:3839724 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
JBrowse link
G Sort1 sortilin 1 involved_in ISO (PMID:18258592)
(MGI:3777515|PMID:18258592)
RGD PMID:18258592 MGI:3777515 NCBI chr 2:195,924,033...196,002,354
Ensembl chr 2:195,924,099...196,002,354
JBrowse link
G Stim1 stromal interaction molecule 1 acts_upstream_of_or_within ISO (MGI:5469800|PMID:23206701) RGD PMID:23206701 MGI:5469800 NCBI chr 1:156,656,246...156,818,777
Ensembl chr 1:156,656,013...156,818,363
JBrowse link
G Trdn triadin IEP RGD PMID:10713145 RGD:634424 NCBI chr 1:23,955,651...24,410,494
Ensembl chr 1:23,955,651...24,410,595
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:96573 (MGI:3522557|PMID:15282335) RGD PMID:15282335 MGI:3522557 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07029272.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:18,827,239...19,244,808 JBrowse link
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 involved_in ISO (MGI:6508502|PMID:23233679) RGD PMID:23233679 MGI:6508502 NCBI chr 8:29,307,864...29,331,249
Ensembl chr 8:29,307,865...29,331,249
JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 involved_in ISO (MGI:6508502|PMID:23233679) RGD PMID:23233679 MGI:6508502 NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205
JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 involved_in ISO (PMID:24567399) RGD PMID:24567399 NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1856326 (MGI:3618019|PMID:10949052)
GO_REF:0000107
RGD
Ensembl
PMID:10949052 GO_REF:0000107 MGI:3618019 NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318
JBrowse link
G Capn2 calpain 2 acts_upstream_of_or_within ISO (MGI:3613415|PMID:14618389), (MGI:3618019|PMID:10949052) RGD PMID:10949052 PMID:14618389 MGI:3613415 MGI:3618019 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969
JBrowse link
G Casp1 caspase 1 IMP RGD PMID:12832042 RGD:1298731 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
JBrowse link
G Cast calpastatin IEP RGD PMID:12832042 RGD:1298731 NCBI chr 2:3,973,112...4,082,658
Ensembl chr 2:3,973,112...4,082,659
JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within ISO MGI:2180558 (MGI:3761450|PMID:14517320) RGD PMID:14517320 MGI:3761450 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
JBrowse link
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3521604|PMID:15520228)
Ensembl
RGD
PMID:15520228 GO_REF:0000107 MGI:3521604 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
JBrowse link
G Dock2 dedicator of cytokinesis 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:18,827,237...19,244,823
Ensembl chr10:18,827,239...19,244,808
JBrowse link
G Dock5 dedicator of cytokinesis 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:41,979,728...42,158,733
Ensembl chr15:41,979,729...42,158,649
JBrowse link
G Dyrk1b dual specificity tyrosine phosphorylation regulated kinase 1B acts_upstream_of_or_within ISO (MGI:2678987|PMID:12902328) RGD PMID:12902328 MGI:2678987 NCBI chr 1:83,479,139...83,497,011
Ensembl chr 1:83,479,147...83,487,169
JBrowse link
G Ervfrd-1 endogenous retrovirus group FRD member 1, envelope acts_upstream_of_or_within ISO (MGI:5800348|PMID:27589388)
(PMID:27589388)
RGD PMID:27589388 MGI:5800348 NCBI chr12:22,151,211...22,158,264
Ensembl chr12:22,151,211...22,158,264
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO MGI:98573 (MGI:3522557|PMID:15282335) RGD PMID:15282335 MGI:3522557 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Ins2 insulin 2 acts_upstream_of_or_within ISO MGI:1861437|MGI:98953 (MGI:3522557|PMID:15282335) RGD PMID:15282335 MGI:3522557 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Myh9 myosin, heavy chain 9 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3664529|PMID:16895968)
GO_REF:0000107
RGD
Ensembl
PMID:16895968 GO_REF:0000107 MGI:3664529 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Mymk myomaker, myoblast fusion factor involved_in ISO (PMID:28681861)
(MGI:5508673|PMID:23868259), (MGI:5904374|PMID:28386024), (MGI:5908735|PMID:28681861), (MGI:5921776|PMID:28860190), (MGI:6116777|PMID:28186492), (MGI:6274942|PMID:30197239)
RGD PMID:23868259 PMID:28186492 PMID:28386024 PMID:28681861 PMID:28860190 More... MGI:5508673 MGI:5904374 MGI:5908735 MGI:5921776 MGI:6116777 MGI:6274942 NCBI chr 3:10,388,361...10,397,364
Ensembl chr 3:10,388,361...10,397,343
JBrowse link
G Mymx myomixer, myoblast fusion factor involved_in ISO
IBA
(MGI:5903126|PMID:28569755), (MGI:5903127|PMID:28569745), (MGI:5904374|PMID:28386024), (MGI:6274942|PMID:30197239)
PMID:21873635
UniProtKB:Q2Q5T5 (PMID:28569745)
RGD PMID:28386024 PMID:28569745 PMID:28569755 PMID:30197239 PMID:21873635 MGI:5903126 MGI:5903127 MGI:5904374 MGI:6274942, RGD:13792537 NCBI chr 9:15,396,638...15,398,264
Ensembl chr 9:15,397,144...15,398,263
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (MGI:3581114|PMID:15890200) RGD PMID:15890200 MGI:3581114 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myof myoferlin involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:235,673,666...235,822,413
Ensembl chr 1:235,673,666...235,822,334
JBrowse link
G Neo1 neogenin 1 acts_upstream_of_or_within ISO (MGI:3521604|PMID:15520228) RGD PMID:15520228 MGI:3521604 NCBI chr 8:59,273,860...59,426,486
Ensembl chr 8:59,275,569...59,430,348
JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA
ISO
GO_REF:0000107
(MGI:3849657|PMID:19470472)
Ensembl
RGD
PMID:19470472 GO_REF:0000107 MGI:3849657 NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078
JBrowse link
G Pitx2 paired-like homeodomain 2 acts_upstream_of_or_within ISO (MGI:3686567|PMID:16958127) RGD PMID:16958127 MGI:3686567 NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
JBrowse link
G Plekho1 pleckstrin homology domain containing O1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5494518|PMID:22553210)
Ensembl
RGD
PMID:22553210 GO_REF:0000107 MGI:5494518 NCBI chr 2:183,544,487...183,552,928
Ensembl chr 2:183,544,499...183,552,785
JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5320842|PMID:22182840)
Ensembl
RGD
PMID:22182840 GO_REF:0000107 MGI:5320842 NCBI chr 3:44,099,387...44,335,478
Ensembl chr 3:44,134,016...44,331,627
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:96573 (MGI:3522557|PMID:15282335) RGD PMID:15282335 MGI:3522557 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
myoblast fusion involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 Cd81 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:6282938|PMID:23575678)
UniProt
RGD
PMID:23575678 GO_REF:0000024 MGI:6282938 NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660
JBrowse link
G Cd9 CD9 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:6282938|PMID:23575678)
UniProt
RGD
PMID:23575678 GO_REF:0000024 MGI:6282938 NCBI chr 4:158,256,328...158,289,136
Ensembl chr 4:158,256,328...158,289,222
JBrowse link
G Mymk myomaker, myoblast fusion factor acts_upstream_of_or_within ISO MGI:4841439 (MGI:5608518|PMID:25085416) RGD PMID:25085416 MGI:5608518 NCBI chr 3:10,388,361...10,397,364
Ensembl chr 3:10,388,361...10,397,343
JBrowse link
G Mymx myomixer, myoblast fusion factor involved_in ISO (MGI:6153677|PMID:29581287) RGD PMID:29581287 MGI:6153677 NCBI chr 9:15,396,638...15,398,264
Ensembl chr 9:15,397,144...15,398,263
JBrowse link
G Ptgfrn prostaglandin F2 receptor inhibitor involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6282938|PMID:23575678)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23575678 GO_REF:0000024 GO_REF:0000107 MGI:6282938 NCBI chr 2:188,469,521...188,544,795
Ensembl chr 2:188,469,521...188,544,795
JBrowse link
myotube cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmd dystrophin acts_upstream_of_or_within ISO MGI:1856328 (MGI:3849772|PMID:19535499) RGD PMID:19535499 MGI:3849772 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA
(PMID:17531227)
GO_REF:0000107
RGD
Ensembl
PMID:17531227 GO_REF:0000107 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Myod1 myogenic differentiation 1 involved_in ISO (PMID:10672515) RGD PMID:10672515 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 acts_upstream_of_or_within ISO (MGI:3821556|PMID:18676376) RGD PMID:18676376 MGI:3821556 NCBI chr 3:157,195,970...157,328,640
Ensembl chr 3:157,198,872...157,328,325
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO (MGI:3821556|PMID:18676376) RGD PMID:18676376 MGI:3821556 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G Smyd3 SET and MYND domain containing 3 acts_upstream_of_or_within ISO (MGI:5500979|PMID:23752591) RGD PMID:23752591 MGI:5500979 NCBI chr13:90,709,263...91,266,209
Ensembl chr13:90,709,270...91,266,253
JBrowse link
myotube cell development involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem182 transmembrane protein 182 involved_in ISO (MGI:6810807|PMID:34427057) RGD PMID:34427057 MGI:6810807 NCBI chr 9:43,059,432...43,111,318
Ensembl chr 9:43,059,439...43,111,317
JBrowse link
myotube differentiation involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl9 BCL9, transcription coactivator acts_upstream_of_or_within ISO MGI:1933114 (MGI:4368064|PMID:19699733) RGD PMID:19699733 MGI:4368064 NCBI chr 2:184,760,616...184,846,261
Ensembl chr 2:184,760,618...184,786,435
JBrowse link
G Klf5 Kruppel-like factor 5 acts_upstream_of_or_within ISO MGI:4353154|MGI:4421792 (MGI:5823533|PMID:27743478) RGD PMID:27743478 MGI:5823533 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (MGI:48687|PMID:1348494) RGD PMID:1348494 MGI:48687 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Tmem182 transmembrane protein 182 involved_in ISO (MGI:6810807|PMID:34427057) RGD PMID:34427057 MGI:6810807 NCBI chr 9:43,059,432...43,111,318
Ensembl chr 9:43,059,439...43,111,317
JBrowse link
negative regulation of myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD-like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) RGD PMID:21364645 MGI:5707584 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 acts_upstream_of_or_within ISO (MGI:5532227|PMID:23844157) RGD PMID:23844157 MGI:5532227 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
JBrowse link
G Il36g interleukin 36, gamma acts_upstream_of_or_within ISO (MGI:5532227|PMID:23844157) RGD PMID:23844157 MGI:5532227 NCBI chr 3:6,948,323...6,954,485
Ensembl chr 3:6,948,297...6,954,480
JBrowse link
G Tmem182 transmembrane protein 182 involved_in ISO (MGI:6810807|PMID:34427057) RGD PMID:34427057 MGI:6810807 NCBI chr 9:43,059,432...43,111,318
Ensembl chr 9:43,059,439...43,111,317
JBrowse link
negative regulation of myotube differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd2 ankyrin repeat domain 2 acts_upstream_of_or_within ISO (MGI:3796961|PMID:18302940), (MGI:5527051|PMID:23824195) RGD PMID:18302940 PMID:23824195 MGI:3796961 MGI:5527051 NCBI chr 1:240,847,111...240,856,563
Ensembl chr 1:240,847,072...240,856,566
JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in IMP PMID:16723531 BHF-UCL PMID:16723531 RGD:1580249 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Bhlha15 basic helix-loop-helix family, member a15 involved_in ISS
ISO
GO_REF:0000024
(MGI:5607242|PMID:17612490)
UniProt
RGD
PMID:17612490 GO_REF:0000024 MGI:5607242 NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713
JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 involved_in ISO (MGI:5297791|PMID:12657651) RGD PMID:12657651 MGI:5297791 NCBI chr 4:178,833,085...178,838,685
Ensembl chr 4:178,834,271...178,838,468
JBrowse link
G Ccn3 cellular communication network factor 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:12050162)
UniProt
RGD
PMID:12050162 GO_REF:0000024 NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019
JBrowse link
G Csf1r colony stimulating factor 1 receptor IMP RGD PMID:7737360 RGD:151665771 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
JBrowse link
G Daxx death-domain associated protein IDA RGD PMID:19308989 RGD:9587764 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Hdac1 histone deacetylase 1 NOT|involved_in ISO (PMID:10983972) RGD PMID:10983972 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac3 histone deacetylase 3 NOT|involved_in ISO (PMID:10983972) RGD PMID:10983972 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO (PMID:10983972) RGD PMID:10983972 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hdac5 histone deacetylase 5 involved_in ISO (PMID:10983972), (PMID:11081517) RGD PMID:10983972 PMID:11081517 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Myocd myocardin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3849559 (MGI:3849299|PMID:17940050)
Ensembl
RGD
PMID:17940050 GO_REF:0000107 MGI:3849299 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in ISO
IEA
(PMID:15653675)
GO_REF:0000107
RGD
Ensembl
PMID:15653675 GO_REF:0000107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Notch1 notch receptor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5319604|PMID:18299578)
UniProt
RGD
PMID:18299578 GO_REF:0000024 MGI:5319604 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Plpp7 phospholipid phosphatase 7 (inactive) acts_upstream_of_or_within ISO MGI:1928394 (MGI:4366685|PMID:19704009) RGD PMID:19704009 MGI:4366685 NCBI chr 3:15,384,461...15,398,820
Ensembl chr 3:15,384,492...15,398,883
JBrowse link
G Tmem119 transmembrane protein 119 involved_in ISO (MGI:6294241|PMID:22579779) RGD PMID:22579779 MGI:6294241 NCBI chr12:42,828,621...42,835,678
Ensembl chr12:42,828,418...42,835,689
JBrowse link
G Trim72 tripartite motif containing 72 acts_upstream_of_or_within ISO (MGI:5602876|PMID:23965929) RGD PMID:23965929 MGI:5602876 NCBI chr 1:182,613,753...182,621,613
Ensembl chr 1:182,613,712...182,621,606
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:5607242|PMID:17612490) RGD PMID:17612490 MGI:5607242 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap1 contactin associated protein 1 involved_in ISO MGI:2384080|MGI:2677631 (MGI:6269164|PMID:28370195) RGD PMID:28370195 MGI:6269164 NCBI chr10:86,109,850...86,125,612
Ensembl chr10:86,111,643...86,125,611
JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2384080|MGI:2677631 (MGI:6269164|PMID:28370195) RGD PMID:28370195 MGI:6269164 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:1856217 (MGI:5605930|PMID:25014022) RGD PMID:25014022 MGI:5605930 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
positive regulation of myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO (MGI:5498642|PMID:23615608) RGD PMID:23615608 MGI:5498642 NCBI chr 7:106,404,844...106,476,902
Ensembl chr 7:106,404,958...106,476,902
JBrowse link
G Capn2 calpain 2 IMP RGD PMID:7657725 RGD:13792659 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969
JBrowse link
G Cd53 Cd53 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:5526919|PMID:22847234)
UniProt
RGD
PMID:22847234 GO_REF:0000024 MGI:5526919 NCBI chr 2:194,352,139...194,399,668
Ensembl chr 2:194,352,139...194,399,657
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (MGI:5532227|PMID:23844157) RGD PMID:23844157 MGI:5532227 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 acts_upstream_of_or_within ISO (MGI:5532227|PMID:23844157) RGD PMID:23844157 MGI:5532227 NCBI chr14:15,722,868...15,727,779
Ensembl chr14:15,722,908...15,728,435
JBrowse link
G Ehd1 EH-domain containing 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5487527|PMID:21177873)
UniProt
RGD
PMID:21177873 GO_REF:0000024 MGI:5487527 NCBI chr 1:203,579,850...203,602,226
Ensembl chr 1:203,579,869...203,602,212
JBrowse link
G Ehd2 EH-domain containing 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5487527|PMID:21177873)
UniProt
RGD
PMID:21177873 GO_REF:0000024 MGI:5487527 NCBI chr 1:76,639,568...76,658,747
Ensembl chr 1:76,637,482...76,658,783
JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:24046456)
(MGI:5634880|PMID:24046456)
RGD PMID:24046456 MGI:5634880 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
JBrowse link
G Flt3lg Fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (MGI:5532227|PMID:23844157) RGD PMID:23844157 MGI:5532227 NCBI chr 1:95,615,056...95,620,463
Ensembl chr 1:95,609,370...95,620,463
JBrowse link
G Gdf15 growth differentiation factor 15 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5532227|PMID:23844157)
Ensembl
RGD
PMID:23844157 GO_REF:0000107 MGI:5532227 NCBI chr16:18,805,312...18,807,893
Ensembl chr16:18,805,239...18,808,055
JBrowse link
G Il4 interleukin 4 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1857194 (MGI:3621675|PMID:12757709)
RGD PMID:12757709 PMID:21873635 MGI:3621675, RGD:13792537 NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of_or_within ISO MGI:1861951 (MGI:3621675|PMID:12757709) RGD PMID:12757709 MGI:3621675 NCBI chr 1:180,115,061...180,139,981
Ensembl chr 1:180,115,120...180,139,980
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5526919|PMID:22847234)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22847234 GO_REF:0000024 GO_REF:0000107 MGI:5526919 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Myod1 myogenic differentiation 1 involved_in ISO (PMID:10672515) RGD PMID:10672515 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 acts_upstream_of_or_within ISO MGI:2182740 (MGI:3621675|PMID:12757709) RGD PMID:12757709 MGI:3621675 NCBI chr 3:157,195,970...157,328,640
Ensembl chr 3:157,198,872...157,328,325
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:17150207)
UniProt
RGD
PMID:17150207 GO_REF:0000024 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
G Scgb3a1 secretoglobin, family 3A, member 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5532227|PMID:23844157)
RGD PMID:23844157 PMID:21873635 MGI:5532227, RGD:13792537 NCBI chr10:33,968,059...33,969,366
Ensembl chr10:33,968,059...33,969,476
JBrowse link
G Tnfsf14 TNF superfamily member 14 acts_upstream_of_or_within ISO (MGI:5532227|PMID:23844157) RGD PMID:23844157 MGI:5532227 NCBI chr 9:2,069,075...2,073,128
Ensembl chr 9:2,069,104...2,073,216
JBrowse link
positive regulation of myotube differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11a ATPase phospholipid transporting 11A involved_in ISO (PMID:29799007)
(MGI:6161090|PMID:29799007)
RGD PMID:29799007 MGI:6161090 NCBI chr16:76,657,752...76,767,640
Ensembl chr16:76,657,752...76,767,640
JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within ISO MGI:2180558 (MGI:3761450|PMID:14517320) RGD PMID:14517320 MGI:3761450 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 acts_upstream_of_or_within IGI
IDA
PMID:9234731 MGI PMID:9234731 PMID:9234731 RGD:10047266, RGD:10047266 NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
JBrowse link
G Maml1 mastermind-like transcriptional coactivator 1 involved_in ISO UniProtKB:Q6T264 (PMID:16510869)
UniProtKB:Q92585 (MGI:3619288|PMID:16510869)
RGD PMID:16510869 MGI:3619288 NCBI chr10:34,588,639...34,624,298
Ensembl chr10:34,588,646...34,623,338
JBrowse link
G Mamstr MEF2 activating motif and SAP domain containing transcriptional regulator acts_upstream_of_or_within ISO MGI:97275 (MGI:3653312|PMID:16818234) RGD PMID:16818234 MGI:3653312 NCBI chr 1:96,109,715...96,116,295
Ensembl chr 1:96,110,343...96,115,744
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5526919|PMID:22847234)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22847234 GO_REF:0000024 GO_REF:0000107 MGI:5526919 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in ISS
ISO
GO_REF:0000024
(MGI:5013661|PMID:21572390)
UniProt
RGD
PMID:21572390 GO_REF:0000024 MGI:5013661 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within ISO MGI:2445183 (MGI:4366685|PMID:19704009) RGD PMID:19704009 MGI:4366685 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Myog myogenin involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5526919|PMID:22847234)
UniProt
Ensembl
RGD
PMID:22847234 GO_REF:0000024 GO_REF:0000107 MGI:5526919 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Neu2 neuraminidase 2 IMP RGD PMID:8630046 RGD:2316563 NCBI chr 9:88,218,494...88,267,356
Ensembl chr 9:88,249,135...88,267,355
JBrowse link
G Piezo1 piezo-type mechanosensitive ion channel component 1 involved_in ISO
ISS
IEA
(PMID:29799007)
(MGI:6161090|PMID:29799007)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:29799007 GO_REF:0000024 GO_REF:0000107 MGI:6161090 NCBI chr19:50,544,580...50,606,812
Ensembl chr19:50,544,582...50,606,501
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA
(PMID:26844700)
PMID:21873635
RGD PMID:26844700 PMID:21873635 RGD:13792537 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
JBrowse link
G Smyd1 SET and MYND domain containing 1 involved_in ISO (PMID:19783823) RGD PMID:19783823 NCBI chr 4:103,195,330...103,252,989
Ensembl chr 4:103,200,322...103,311,766
JBrowse link
G Thra thyroid hormone receptor alpha acts_upstream_of_or_within ISO (MGI:3619869|PMID:16322094) RGD PMID:16322094 MGI:3619869 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) RGD PMID:18178581 MGI:3778600 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857134 (MGI:1928555|PMID:11146504) RGD PMID:11146504 MGI:1928555 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244
JBrowse link
G Myf5 myogenic factor 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
JBrowse link
G Myf6 myogenic factor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:42,813,008...42,814,852
Ensembl chr 7:42,812,792...42,814,852
JBrowse link
G Myod1 myogenic differentiation 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin involved_in IBA
IEA
ISO
ISS
PMID:21873635
GO_REF:0000107
(MGI:62381|PMID:8393145)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:8393145 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:62381, RGD:13792537 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Shox2 short stature homeobox 2 involved_in ISO
IEA
(MGI:4946446|PMID:21156168)
GO_REF:0000107
RGD
Ensembl
PMID:21156168 GO_REF:0000107 MGI:4946446 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
JBrowse link
positive regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbm24 RNA binding motif protein 24 involved_in ISO (MGI:6148527|PMID:25313962) RGD PMID:25313962 MGI:6148527 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
JBrowse link
positive regulation of tongue muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in ISO (MGI:3809313|PMID:18816858) RGD PMID:18816858 MGI:3809313 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3809313|PMID:18816858)
UniProt
RGD
PMID:18816858 GO_REF:0000024 MGI:3809313 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
JBrowse link
regulation of myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myog myogenin involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5508727|PMID:21465538)
UniProt
Ensembl
RGD
PMID:21465538 GO_REF:0000024 GO_REF:0000107 MGI:5508727 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Plekho1 pleckstrin homology domain containing O1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:183,544,487...183,552,928
Ensembl chr 2:183,544,499...183,552,785
JBrowse link
regulation of myotube differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmpk DM1 protein kinase involved_in ISO (MGI:3806406|PMID:18729234) RGD PMID:18729234 MGI:3806406 NCBI chr 1:78,730,255...78,740,585
Ensembl chr 1:78,730,275...78,740,593
JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148
JBrowse link
G Hdac5 histone deacetylase 5 involved_in ISO (MGI:3712602|PMID:17468767) RGD PMID:17468767 MGI:3712602 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (MGI:4999688|PMID:20977548) RGD PMID:20977548 MGI:4999688 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (MGI:4438547|PMID:19817877) RGD PMID:19817877 MGI:4438547 NCBI chr 3:161,801,550...161,814,381
Ensembl chr 3:161,801,577...161,814,381
JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3712602|PMID:17468767)
UniProt
RGD
PMID:17468767 GO_REF:0000024 MGI:3712602 NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991
JBrowse link
regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148
JBrowse link
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within ISO MGI:1333784|MGI:1931221 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO MGI:1931221|MGI:3036234 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO MGI:1333784|MGI:3036284 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:468,862...481,992
Ensembl chr 7:469,723...481,992
JBrowse link
regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1333784|MGI:1931221 (MGI:3763703|PMID:17786239)
GO_REF:0000107
RGD
Ensembl
PMID:17786239 GO_REF:0000107 MGI:3763703 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO MGI:1931221|MGI:3036234 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO MGI:1333784|MGI:3036284 (MGI:3763703|PMID:17786239) RGD PMID:17786239 MGI:3763703 NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333
JBrowse link
G Nln neurolysin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4125183 (MGI:5588076|PMID:24719333)
Ensembl
RGD
PMID:24719333 GO_REF:0000107 MGI:5588076 NCBI chr 2:35,133,634...35,232,927
Ensembl chr 2:35,134,145...35,232,914
JBrowse link
skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle involved_in ISS
ISO
GO_REF:0000024
(MGI:78319|PMID:2731651)
UniProt
RGD
PMID:2731651 GO_REF:0000024 MGI:78319 NCBI chr19:51,883,713...51,886,725
Ensembl chr19:51,883,715...51,886,742
JBrowse link
G Actn1 actinin, alpha 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:98,998,553...99,093,334
Ensembl chr 6:98,998,556...99,093,251
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of ISO MGI:1857134 (MGI:1928555|PMID:11146504) RGD PMID:11146504 MGI:1928555 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Bin3 bridging integrator 3 acts_upstream_of_or_within ISO MGI:3512131 (MGI:5517720|PMID:23872330) RGD PMID:23872330 MGI:5517720 NCBI chr15:45,173,725...45,212,607
Ensembl chr15:45,173,732...45,212,604
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1856326 (MGI:3630139|PMID:289331), (MGI:53207|PMID:8462749), (MGI:66718|PMID:8143864)
GO_REF:0000107
RGD
Ensembl
PMID:289331 PMID:8143864 PMID:8462749 GO_REF:0000107 MGI:3630139 MGI:53207 MGI:66718 NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318
JBrowse link
G Cav2 caveolin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
GO_REF:0000107
MGI:2180372 (MGI:3695802|PMID:17200204)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17200204 GO_REF:0000024 GO_REF:0000107 MGI:3695802 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244
JBrowse link
G Dner delta/notch-like EGF repeat containing acts_upstream_of_or_within ISO (MGI:3583881|PMID:15965470) RGD PMID:15965470 MGI:3583881 NCBI chr 9:85,586,985...85,902,820
Ensembl chr 9:85,586,987...85,902,637
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2158814 (MGI:3662804|PMID:16962942)
Ensembl
RGD
PMID:16962942 GO_REF:0000107 MGI:3662804 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Homer1 homer scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3526529 (MGI:3784629|PMID:18268005)
Ensembl
RGD
PMID:18268005 GO_REF:0000107 MGI:3784629 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785
JBrowse link
G Kel Kell metallo-endopeptidase (Kell blood group) acts_upstream_of_or_within ISO MGI:103569 (MGI:5550316|PMID:24405768) RGD PMID:24405768 MGI:5550316 NCBI chr 4:70,568,241...70,585,666
Ensembl chr 4:70,568,243...70,585,631
JBrowse link
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5700633|PMID:25940086)
MGI:4843038 (MGI:5586592|PMID:24960163)
RGD PMID:24960163 PMID:25940086 PMID:21873635 MGI:5586592 MGI:5700633, RGD:13792537 NCBI chr 8:121,441,275...121,446,806
Ensembl chr 8:121,441,287...121,446,800
JBrowse link
G Klhl41 kelch-like family member 41 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:54,434,291...54,447,415
Ensembl chr 3:54,434,234...54,449,222
JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (MGI:5644091|PMID:25774500), (MGI:5648755|PMID:26035871) RGD PMID:25774500 PMID:26035871 MGI:5644091 MGI:5648755 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244
JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857667 (MGI:62381|PMID:8393145)
GO_REF:0000107
RGD
Ensembl
PMID:8393145 GO_REF:0000107 MGI:62381 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Myorg myogenesis regulating glycosidase involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:19706595)
(MGI:4422154|PMID:19706595)
PMID:21873635
RGD PMID:19706595 PMID:21873635 MGI:4422154, RGD:13792537 NCBI chr 5:56,654,257...56,664,467
Ensembl chr 5:56,648,643...56,664,440
JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO MGI:2182778 (MGI:1933051|PMID:11254352) RGD PMID:11254352 MGI:1933051 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
JBrowse link
G P2rx2 purinergic receptor P2X 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2687349 (MGI:3766888|PMID:17706883)
Ensembl
RGD
PMID:17706883 GO_REF:0000107 MGI:3766888 NCBI chr12:46,338,979...46,342,891
Ensembl chr12:46,339,549...46,342,891
JBrowse link
G Plec plectin involved_in ISO MGI:3799315 (MGI:3797705|PMID:18490514), (MGI:5567855|PMID:24487589) RGD PMID:18490514 PMID:24487589 MGI:3797705 MGI:5567855 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha acts_upstream_of_or_within
involved_in
ISO
ISS
(MGI:3586394|PMID:16024798)
(MGI:3641363|PMID:12773574)
GO_REF:0000024
RGD
UniProt
PMID:12773574 PMID:16024798 GO_REF:0000024 MGI:3586394 MGI:3641363 NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974
JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in ISS
ISO
GO_REF:0000024
(MGI:3641363|PMID:12773574)
UniProt
RGD
PMID:12773574 GO_REF:0000024 MGI:3641363 NCBI chr15:3,759,950...3,804,976
Ensembl chr15:3,760,030...3,804,981
JBrowse link
G Rcan1 regulator of calcineurin 1 acts_upstream_of_or_within ISO (MGI:3586394|PMID:16024798) RGD PMID:16024798 MGI:3586394 NCBI chr11:31,622,208...31,702,150
Ensembl chr11:31,622,210...31,702,045
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:3764002|PMID:18003898)
UniProt
RGD
PMID:18003898 GO_REF:0000024 MGI:3764002 NCBI chr 1:84,292,578...84,423,799
Ensembl chr 1:84,292,578...84,423,812
JBrowse link
G Selenon selenoprotein N involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5494499|PMID:23325319)
RGD PMID:23325319 PMID:21873635 MGI:5494499, RGD:13792537 NCBI chr 5:146,748,638...146,764,656
Ensembl chr 5:146,748,652...146,763,059
JBrowse link
G Six1 SIX homeobox 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (MGI:1095997|PMID:9284043) RGD PMID:9284043 MGI:1095997 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2176256|MGI:3573783 (MGI:5438143|PMID:22987639)
Ensembl
RGD
PMID:22987639 GO_REF:0000107 MGI:5438143 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO MGI:6451766 (MGI:6141536|PMID:28237315) RGD PMID:28237315 MGI:6141536 NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
JBrowse link
G Stac3 SH3 and cysteine rich domain 3 acts_upstream_of_or_within ISO (MGI:5508972|PMID:23626854) RGD PMID:23626854 MGI:5508972 NCBI chr 7:63,343,078...63,350,590
Ensembl chr 7:63,343,186...63,350,589
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
JBrowse link
G Xk X-linked Kx blood group involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1346053 (MGI:5550316|PMID:24405768)
Ensembl
RGD
PMID:24405768 GO_REF:0000107 MGI:5550316 NCBI chr  X:13,436,412...13,472,830
Ensembl chr  X:13,436,418...13,472,830
JBrowse link
skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within
ISO (MGI:5700633|PMID:25940086)
(MGI:5565628|PMID:24361185)
RGD PMID:24361185 PMID:25940086 MGI:5565628 MGI:5700633 NCBI chr 8:121,441,275...121,446,806
Ensembl chr 8:121,441,287...121,446,800
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:1857796 (MGI:3621570|PMID:15238161)
GO_REF:0000107
RGD
Ensembl
PMID:15238161 GO_REF:0000107 MGI:3621570 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:91,802,328...91,816,062
Ensembl chr 6:91,802,329...91,815,992
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    cellular process 17431
      cellular developmental process 4533
        cell differentiation 4510
          muscle cell differentiation 466
            striated muscle cell differentiation 347
              myotube differentiation 144
                myoblast fusion + 52
                myotube cell development + 49
                myotube differentiation involved in skeletal muscle regeneration + 9
                negative regulation of myotube differentiation + 18
                positive regulation of myotube differentiation + 16
                regulation of myotube differentiation + 48
                skeletal muscle fiber differentiation + 10
paths to the root