Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:myotube differentiation
go back to main search page
Accession:GO:0014902 term browser browse the term
Definition:The process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotube differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual myotubes can fuse to form bigger myotubes and start to contract. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.


show annotations for term's descendants           Sort by:
myotube differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd2 ankyrin repeat domain 2 acts_upstream_of ISO (PMID:18302940), (PMID:23824195) RGD PMID:18302940 PMID:23824195 NCBI chr 1:240,847,111...240,856,563
Ensembl chr 1:240,847,072...240,856,566 		JBrowse link
G Avpr1a arginine vasopressin receptor 1A IEP RGD PMID:18021262 RGD:2300341 NCBI chr 7:58,114,306...58,118,230
Ensembl chr 7:58,114,284...58,122,215 		JBrowse link
G Barx2 BARX homeobox 2 acts_upstream_of_or_within ISO (PMID:12486129) RGD PMID:12486129 NCBI chr 8:30,251,132...30,319,105
Ensembl chr 8:30,251,132...30,319,013 		JBrowse link
G Cav3 caveolin 3 acts_upstream_of
acts_upstream_of_or_within		 ISO MGI:2180558 (PMID:14517320)
(PMID:21182936)		 RGD PMID:14517320 PMID:21182936 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137 		JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within ISO MGI:2158814 (PMID:12368211), (PMID:16962942) RGD PMID:12368211 PMID:16962942 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO MGI:98573 (PMID:15282335) RGD PMID:15282335 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 acts_upstream_of_or_within ISO MGI:97276 (PMID:22106411) RGD PMID:22106411 NCBI chr17:77,081,508...77,106,114
Ensembl chr17:77,083,740...77,106,073 		JBrowse link
G Hdac6 histone deacetylase 6 acts_upstream_of_or_within ISO (PMID:22174839) RGD PMID:22174839 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441 		JBrowse link
G Igf1 insulin-like growth factor 1 acts_upstream_of_or_within ISO (PMID:24722207) RGD PMID:24722207 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Ins2 insulin 2 acts_upstream_of_or_within ISO MGI:1861437|MGI:98953 (PMID:15282335) RGD PMID:15282335 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:24722207) RGD PMID:24722207 NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
IEA		 (PMID:8455629)
GO_REF:0000107		 RGD
Ensembl		 PMID:8455629 GO_REF:0000107 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1857655 (PMID:7651534) RGD PMID:7651534 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor acts_upstream_of_or_within ISO (PMID:22147266) RGD PMID:22147266 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Myef2 myelin expression factor 2 involved_in ISO (PMID:8455629) RGD PMID:8455629 NCBI chr 3:112,338,241...112,374,122
Ensembl chr 3:112,338,241...112,374,181 		JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (PMID:9234731) RGD PMID:9234731 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Myog myogenin acts_upstream_of_or_within IMP
ISO		 MGI:1353592 (PMID:22106411) RGD PMID:22106411 PMID:1696254 RGD:9686131 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039 		JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO (PMID:23206701) RGD PMID:23206701 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150 		JBrowse link
G Pld3 phospholipase D family, member 3 involved_in ISO
IEA
ISS		 (PMID:22428023)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:22428023 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:82,821,863...82,844,280
Ensembl chr 1:82,821,875...82,844,072 		JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1857796|MGI:1861186 (PMID:11171399) RGD PMID:11171399 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Ski Ski proto-oncogene involved_in
acts_upstream_of_or_within		 ISO (PMID:19008232)
MGI:102780|MGI:109339 (PMID:17352741), (PMID:19008232)		 RGD PMID:17352741 PMID:19008232 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Sort1 sortilin 1 involved_in ISO
IEA		 (PMID:18258592)
GO_REF:0000107
(MGI:3777515|PMID:18258592)		 RGD
Ensembl		 PMID:18258592 GO_REF:0000107 MGI:3777515 NCBI chr 2:195,924,033...196,002,354
Ensembl chr 2:195,924,099...196,002,354 		JBrowse link
G Stim1 stromal interaction molecule 1 acts_upstream_of_or_within ISO (PMID:23206701) RGD PMID:23206701 NCBI chr 1:156,656,246...156,818,777
Ensembl chr 1:156,656,013...156,818,363 		JBrowse link
G Trdn triadin IEP RGD PMID:10713145 RGD:634424 NCBI chr 1:23,955,651...24,410,494
Ensembl chr 1:23,955,651...24,410,595 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:96573 (PMID:15282335) RGD PMID:15282335 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 involved_in ISO (MGI:6508502|PMID:23233679) RGD PMID:23233679 MGI:6508502 NCBI chr 8:29,307,864...29,331,249
Ensembl chr 8:29,307,865...29,331,249 		JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 involved_in ISO (MGI:6508502|PMID:23233679) RGD PMID:23233679 MGI:6508502 NCBI chr11:25,000,627...25,047,205
Ensembl chr11:25,000,637...25,047,205 		JBrowse link
G Adgrb3 adhesion G protein-coupled receptor B3 involved_in ISO (PMID:24567399) RGD PMID:24567399 NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855 		JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856326 (PMID:10949052)		 Ensembl
RGD		 PMID:10949052 GO_REF:0000107 NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318 		JBrowse link
G Capn2 calpain 2 acts_upstream_of_or_within ISO (PMID:10949052), (PMID:14618389) RGD PMID:10949052 PMID:14618389 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969 		JBrowse link
G Casp1 caspase 1 IMP RGD PMID:12832042 RGD:1298731 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383 		JBrowse link
G Cast calpastatin IEP RGD PMID:12832042 RGD:1298731 NCBI chr 2:3,973,112...4,082,658
Ensembl chr 2:3,973,112...4,082,659 		JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within ISO MGI:2180558 (PMID:14517320) RGD PMID:14517320 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137 		JBrowse link
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15520228)		 Ensembl
RGD		 PMID:15520228 GO_REF:0000107 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033 		JBrowse link
G Dock5 dedicator of cytokinesis 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:41,979,728...42,158,733
Ensembl chr15:41,979,729...42,158,649 		JBrowse link
G Dyrk1b dual specificity tyrosine phosphorylation regulated kinase 1B acts_upstream_of_or_within ISO (PMID:12902328) RGD PMID:12902328 NCBI chr 1:83,479,168...83,497,011
Ensembl chr 1:83,479,147...83,487,169 		JBrowse link
G Ervfrd-1 endogenous retrovirus group FRD member 1, envelope acts_upstream_of_or_within ISO (PMID:27589388) RGD PMID:27589388 NCBI chr12:22,151,211...22,158,264
Ensembl chr12:22,151,211...22,158,264 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO MGI:98573 (PMID:15282335) RGD PMID:15282335 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Ins2 insulin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1861437|MGI:98953 (PMID:15282335)		 Ensembl
RGD		 PMID:15282335 GO_REF:0000107 NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Myh9 myosin, heavy chain 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16895968)		 Ensembl
RGD		 PMID:16895968 GO_REF:0000107 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457 		JBrowse link
G Mymk myomaker, myoblast fusion factor involved_in ISO (PMID:28681861)
(MGI:5508673|PMID:23868259), (MGI:5904374|PMID:28386024), (MGI:5908735|PMID:28681861), (MGI:5921776|PMID:28860190), (MGI:6116777|PMID:28186492), (MGI:6274942|PMID:30197239)		 RGD PMID:23868259 PMID:28186492 PMID:28386024 PMID:28681861 PMID:28860190 More... MGI:5508673 MGI:5904374 MGI:5908735 MGI:5921776 MGI:6116777 MGI:6274942 NCBI chr 3:10,388,363...10,397,294
Ensembl chr 3:10,388,361...10,397,343 		JBrowse link
G Mymx myomixer, myoblast fusion factor involved_in ISO
IBA		 (MGI:5903126|PMID:28569755), (MGI:5903127|PMID:28569745), (MGI:5904374|PMID:28386024), (MGI:6274942|PMID:30197239)
GO_REF:0000033
UniProtKB:Q2Q5T5 (PMID:28569745)		 RGD
GO_Central		 PMID:28386024 PMID:28569745 PMID:28569755 PMID:30197239 GO_REF:0000033 MGI:5903126 MGI:5903127 MGI:5904374 MGI:6274942 NCBI chr 9:15,397,086...15,398,263
Ensembl chr 9:15,397,144...15,398,263 		JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (PMID:15890200) RGD PMID:15890200 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Neo1 neogenin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15520228)		 Ensembl
RGD		 PMID:15520228 GO_REF:0000107 NCBI chr 8:59,273,860...59,426,486
Ensembl chr 8:59,275,569...59,430,348 		JBrowse link
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in IEA
ISO		 GO_REF:0000107
(MGI:3849657|PMID:19470472)		 Ensembl
RGD		 PMID:19470472 GO_REF:0000107 MGI:3849657 NCBI chr 1:85,720,812...85,749,079
Ensembl chr 1:85,720,812...85,749,078 		JBrowse link
G Plekho1 pleckstrin homology domain containing O1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:22553210)		 Ensembl
RGD		 PMID:22553210 GO_REF:0000107 NCBI chr 2:183,544,487...183,552,928
Ensembl chr 2:183,544,499...183,552,785 		JBrowse link
G Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:22182840)		 Ensembl
RGD		 PMID:22182840 GO_REF:0000107 NCBI chr 3:44,099,387...44,335,478
Ensembl chr 3:44,134,016...44,331,627 		JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO MGI:96573 (PMID:15282335) RGD PMID:15282335 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651 		JBrowse link
myoblast fusion involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 Cd81 molecule involved_in ISS
ISO		 GO_REF:0000024
(MGI:6282938|PMID:23575678)		 UniProt
RGD		 PMID:23575678 GO_REF:0000024 MGI:6282938 NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660 		JBrowse link
G Cd9 CD9 molecule involved_in ISS
ISO		 GO_REF:0000024
(MGI:6282938|PMID:23575678)		 UniProt
RGD		 PMID:23575678 GO_REF:0000024 MGI:6282938 NCBI chr 4:158,256,328...158,289,136
Ensembl chr 4:158,256,328...158,289,222 		JBrowse link
G Mymk myomaker, myoblast fusion factor acts_upstream_of_or_within ISO MGI:4841439 (PMID:25085416) RGD PMID:25085416 NCBI chr 3:10,388,363...10,397,294
Ensembl chr 3:10,388,361...10,397,343 		JBrowse link
G Mymx myomixer, myoblast fusion factor involved_in ISO (MGI:6153677|PMID:29581287)
(PMID:35642635)		 RGD PMID:29581287 PMID:35642635 MGI:6153677 NCBI chr 9:15,397,086...15,398,263
Ensembl chr 9:15,397,144...15,398,263 		JBrowse link
G Ptgfrn prostaglandin F2 receptor inhibitor involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:6282938|PMID:23575678)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:23575678 GO_REF:0000024 GO_REF:0000107 MGI:6282938 NCBI chr 2:188,469,521...188,544,795
Ensembl chr 2:188,469,521...188,544,795 		JBrowse link
myotube cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmd dystrophin acts_upstream_of_or_within ISO MGI:1856328 (PMID:19535499) RGD PMID:19535499 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA		 (PMID:17531227)
GO_REF:0000107		 RGD
Ensembl		 PMID:17531227 GO_REF:0000107 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Myod1 myogenic differentiation 1 involved_in ISO
IEA		 (PMID:10672515)
GO_REF:0000107		 RGD
Ensembl		 PMID:10672515 GO_REF:0000107 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 acts_upstream_of_or_within ISO (PMID:18676376) RGD PMID:18676376 NCBI chr 3:157,195,970...157,328,640
Ensembl chr 3:157,198,872...157,328,325 		JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO (PMID:18676376) RGD PMID:18676376 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150 		JBrowse link
G Smyd3 SET and MYND domain containing 3 acts_upstream_of_or_within ISO (PMID:23752591) RGD PMID:23752591 NCBI chr13:90,709,263...91,266,209
Ensembl chr13:90,709,270...91,266,253 		JBrowse link
myotube cell development involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tmem182 transmembrane protein 182 involved_in ISO (MGI:6810807|PMID:34427057) RGD PMID:34427057 MGI:6810807 NCBI chr 9:43,059,432...43,111,318
Ensembl chr 9:43,059,439...43,111,317 		JBrowse link
myotube differentiation involved in skeletal muscle regeneration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl9 BCL9, transcription coactivator acts_upstream_of_or_within ISO MGI:1933114 (PMID:19699733) RGD PMID:19699733 NCBI chr 2:184,760,616...184,846,261
Ensembl chr 2:184,760,618...184,786,435 		JBrowse link
G Klf5 KLF transcription factor 5 acts_upstream_of_or_within ISO MGI:4353154|MGI:4421792 (PMID:27743478) RGD PMID:27743478 NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445 		JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (PMID:1348494) RGD PMID:1348494 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Tmem182 transmembrane protein 182 involved_in ISO (MGI:6810807|PMID:34427057) RGD PMID:34427057 MGI:6810807 NCBI chr 9:43,059,432...43,111,318
Ensembl chr 9:43,059,439...43,111,317 		JBrowse link
negative regulation of myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cflar CASP8 and FADD-like apoptosis regulator involved_in ISO (MGI:5707584|PMID:21364645) RGD PMID:21364645 MGI:5707584 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034 		JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 acts_upstream_of_or_within ISO (PMID:23844157) RGD PMID:23844157 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975 		JBrowse link
G Il36g interleukin 36, gamma acts_upstream_of_or_within ISO (PMID:23844157) RGD PMID:23844157 NCBI chr 3:6,948,323...6,954,485
Ensembl chr 3:6,948,297...6,954,480 		JBrowse link
G Tmem182 transmembrane protein 182 involved_in ISO (MGI:6810807|PMID:34427057) RGD PMID:34427057 MGI:6810807 NCBI chr 9:43,059,432...43,111,318
Ensembl chr 9:43,059,439...43,111,317 		JBrowse link
negative regulation of myotube differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd2 ankyrin repeat domain 2 acts_upstream_of_or_within ISO (PMID:18302940), (PMID:23824195) RGD PMID:18302940 PMID:23824195 NCBI chr 1:240,847,111...240,856,563
Ensembl chr 1:240,847,072...240,856,566 		JBrowse link
G Bdnf brain-derived neurotrophic factor involved_in IMP PMID:16723531 BHF-UCL PMID:16723531 RGD:1580249 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615 		JBrowse link
G Bhlha15 basic helix-loop-helix family, member a15 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5607242|PMID:17612490)		 UniProt
RGD		 PMID:17612490 GO_REF:0000024 MGI:5607242 NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713 		JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 involved_in ISO
IEA		 (MGI:5297791|PMID:12657651)
GO_REF:0000107		 RGD
Ensembl		 PMID:12657651 GO_REF:0000107 MGI:5297791 NCBI chr 4:178,834,264...178,838,618
Ensembl chr 4:178,834,271...178,838,468 		JBrowse link
G Ccn3 cellular communication network factor 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:12050162)		 UniProt
RGD		 PMID:12050162 GO_REF:0000024 NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019 		JBrowse link
G Csf1r colony stimulating factor 1 receptor IMP RGD PMID:7737360 RGD:151665771 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415 		JBrowse link
G Daxx death-domain associated protein IDA RGD PMID:19308989 RGD:9587764 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843 		JBrowse link
G Hdac1 histone deacetylase 1 NOT|involved_in ISO (PMID:10983972) RGD PMID:10983972 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111 		JBrowse link
G Hdac3 histone deacetylase 3 NOT|involved_in ISO (PMID:10983972) RGD PMID:10983972 NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856 		JBrowse link
G Hdac4 histone deacetylase 4 involved_in ISO (PMID:10983972) RGD PMID:10983972 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164 		JBrowse link
G Hdac5 histone deacetylase 5 involved_in ISO (PMID:10983972), (PMID:11081517) RGD PMID:10983972 PMID:11081517 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235 		JBrowse link
G Myocd myocardin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3849559 (PMID:17940050)		 Ensembl
RGD		 PMID:17940050 GO_REF:0000107 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in ISO
IEA		 (PMID:15653675)
GO_REF:0000107		 RGD
Ensembl		 PMID:15653675 GO_REF:0000107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5319604|PMID:18299578) RGD PMID:18299578 MGI:5319604 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Plpp7 phospholipid phosphatase 7 (inactive) acts_upstream_of_or_within ISO MGI:1928394 (PMID:19704009) RGD PMID:19704009 NCBI chr 3:15,384,461...15,398,820
Ensembl chr 3:15,384,492...15,398,883 		JBrowse link
G Rpl3l ribosomal protein L3-like involved_in ISO (MGI:6838892|PMID:26684695) RGD PMID:26684695 MGI:6838892 NCBI chr10:13,753,914...13,764,458
Ensembl chr10:13,753,886...13,764,457 		JBrowse link
G Tmem119 transmembrane protein 119 involved_in ISO (MGI:6294241|PMID:22579779) RGD PMID:22579779 MGI:6294241 NCBI chr12:42,828,621...42,835,678
Ensembl chr12:42,828,418...42,835,689 		JBrowse link
G Trim72 tripartite motif containing 72 acts_upstream_of_or_within ISO (PMID:23965929) RGD PMID:23965929 NCBI chr 1:182,613,753...182,621,613
Ensembl chr 1:182,613,712...182,621,606 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:5607242|PMID:17612490) RGD PMID:17612490 MGI:5607242 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693 		JBrowse link
neuromuscular junction development, skeletal muscle fiber term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap1 contactin associated protein 1 involved_in ISO MGI:2384080|MGI:2677631 (PMID:28370195) RGD PMID:28370195 NCBI chr10:86,109,850...86,125,612
Ensembl chr10:86,111,643...86,125,611 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO MGI:2384080|MGI:2677631 (PMID:28370195) RGD PMID:28370195 NCBI chr 4:74,109,455...76,366,434
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:1856217 (PMID:25014022) RGD PMID:25014022 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714 		JBrowse link
positive regulation of myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb1 adhesion G protein-coupled receptor B1 involved_in ISO
IEA		 (MGI:5498642|PMID:23615608)
GO_REF:0000107		 RGD
Ensembl		 PMID:23615608 GO_REF:0000107 MGI:5498642 NCBI chr 7:106,404,827...106,476,902
Ensembl chr 7:106,404,958...106,476,902 		JBrowse link
G Capn2 calpain 2 IMP RGD PMID:7657725 RGD:13792659 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969 		JBrowse link
G Cd53 Cd53 molecule involved_in ISS
ISO		 GO_REF:0000024
(MGI:5526919|PMID:22847234)		 UniProt
RGD		 PMID:22847234 GO_REF:0000024 MGI:5526919 NCBI chr 2:194,352,139...194,399,668
Ensembl chr 2:194,352,139...194,399,657 		JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:23844157) RGD PMID:23844157 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168 		JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 acts_upstream_of_or_within ISO (PMID:23844157) RGD PMID:23844157 NCBI chr14:15,722,868...15,727,779
Ensembl chr14:15,722,908...15,728,435 		JBrowse link
G Ehd1 EH-domain containing 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5487527|PMID:21177873)		 UniProt
RGD		 PMID:21177873 GO_REF:0000024 MGI:5487527 NCBI chr 1:203,579,850...203,602,226
Ensembl chr 1:203,579,869...203,602,212 		JBrowse link
G Ehd2 EH-domain containing 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5487527|PMID:21177873)		 UniProt
RGD		 PMID:21177873 GO_REF:0000024 MGI:5487527 NCBI chr 1:76,639,568...76,658,747
Ensembl chr 1:76,637,482...76,658,783 		JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:24046456)
(MGI:5634880|PMID:24046456)		 RGD PMID:24046456 MGI:5634880 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978 		JBrowse link
G Flt3lg Fms related receptor tyrosine kinase 3 ligand acts_upstream_of_or_within ISO (PMID:23844157) RGD PMID:23844157 NCBI chr 1:95,615,056...95,620,463
Ensembl chr 1:95,609,370...95,620,463 		JBrowse link
G Gdf15 growth differentiation factor 15 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23844157)		 Ensembl
RGD		 PMID:23844157 GO_REF:0000107 NCBI chr16:18,804,457...18,808,043
Ensembl chr16:18,805,239...18,808,055 		JBrowse link
G Il4 interleukin 4 acts_upstream_of_or_within ISO MGI:1857194 (PMID:12757709) RGD PMID:12757709 NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750 		JBrowse link
G Il4r interleukin 4 receptor acts_upstream_of_or_within ISO MGI:1861951 (PMID:12757709) RGD PMID:12757709 NCBI chr 1:180,115,061...180,139,981
Ensembl chr 1:180,115,120...180,139,980 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5526919|PMID:22847234)		 UniProt
Ensembl
RGD		 PMID:22847234 GO_REF:0000024 GO_REF:0000107 MGI:5526919 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589 		JBrowse link
G Myod1 myogenic differentiation 1 involved_in ISO
IEA		 (PMID:10672515)
GO_REF:0000107		 RGD
Ensembl		 PMID:10672515 GO_REF:0000107 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Nfatc2 nuclear factor of activated T-cells 2 acts_upstream_of_or_within ISO MGI:2182740 (PMID:12757709) RGD PMID:12757709 NCBI chr 3:157,195,970...157,328,640
Ensembl chr 3:157,198,872...157,328,325 		JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17150207)		 UniProt
RGD		 PMID:17150207 GO_REF:0000024 NCBI chr17:40,323,748...40,547,482
Ensembl chr17:40,323,867...40,548,092 		JBrowse link
G Scgb3a1 secretoglobin, family 3A, member 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23844157)		 GO_Central
RGD		 PMID:23844157 GO_REF:0000033 NCBI chr10:33,968,059...33,969,366
Ensembl chr10:33,968,059...33,969,476 		JBrowse link
G Tnfsf14 TNF superfamily member 14 acts_upstream_of_or_within ISO (PMID:23844157) RGD PMID:23844157 NCBI chr 9:2,068,295...2,073,128
Ensembl chr 9:2,069,104...2,073,216 		JBrowse link
positive regulation of myotube differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp11a ATPase phospholipid transporting 11A involved_in ISO (PMID:29799007)
(MGI:6161090|PMID:29799007)		 RGD PMID:29799007 MGI:6161090 NCBI chr16:76,657,752...76,767,640
Ensembl chr16:76,657,752...76,767,640 		JBrowse link
G Cav3 caveolin 3 acts_upstream_of_or_within ISO MGI:2180558 (PMID:14517320) RGD PMID:14517320 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137 		JBrowse link
G Csrp3 cysteine and glycine rich protein 3 acts_upstream_of_or_within IGI
IDA		 PMID:9234731 MGI PMID:9234731 PMID:9234731 RGD:10047266, RGD:10047266 NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653 		JBrowse link
G Maml1 mastermind-like transcriptional coactivator 1 involved_in ISO UniProtKB:Q6T264 (PMID:16510869)
UniProtKB:Q92585 (MGI:3619288|PMID:16510869)		 RGD PMID:16510869 MGI:3619288 NCBI chr10:34,588,639...34,623,024
Ensembl chr10:34,588,646...34,623,338 		JBrowse link
G Mamstr MEF2 activating motif and SAP domain containing transcriptional regulator acts_upstream_of_or_within ISO MGI:97275 (PMID:16818234) RGD PMID:16818234 NCBI chr 1:96,109,715...96,116,295
Ensembl chr 1:96,110,343...96,115,744 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5526919|PMID:22847234)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:22847234 GO_REF:0000024 GO_REF:0000107 MGI:5526919 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589 		JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5013661|PMID:21572390)		 UniProt
RGD		 PMID:21572390 GO_REF:0000024 MGI:5013661 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864 		JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2445183 (PMID:19704009)		 Ensembl
RGD		 PMID:19704009 GO_REF:0000107 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Myog myogenin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5526919|PMID:22847234)		 UniProt
Ensembl
RGD		 PMID:22847234 GO_REF:0000024 GO_REF:0000107 MGI:5526919 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039 		JBrowse link
G Neu2 neuraminidase 2 IMP RGD PMID:8630046 RGD:2316563 NCBI chr 9:88,218,494...88,267,356
Ensembl chr 9:88,249,135...88,267,355 		JBrowse link
G Piezo1 piezo-type mechanosensitive ion channel component 1 involved_in ISO
ISS
IEA		 (PMID:29799007)
(MGI:6161090|PMID:29799007)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:29799007 GO_REF:0000024 GO_REF:0000107 MGI:6161090 NCBI chr19:50,544,580...50,606,812
Ensembl chr19:50,544,582...50,606,501 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO
IBA		 (PMID:26844700)
GO_REF:0000033		 RGD
GO_Central		 PMID:26844700 GO_REF:0000033 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Smyd1 SET and MYND domain containing 1 involved_in ISO (PMID:19783823) RGD PMID:19783823 NCBI chr 4:103,195,330...103,252,989
Ensembl chr 4:103,200,322...103,311,766 		JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) RGD PMID:18178581 MGI:3778600 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857134 (PMID:11146504)		 Ensembl
RGD		 PMID:11146504 GO_REF:0000107 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244 		JBrowse link
G Myf5 myogenic factor 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177 		JBrowse link
G Myf6 myogenic factor 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:42,813,008...42,814,852
Ensembl chr 7:42,812,792...42,814,852 		JBrowse link
G Myod1 myogenic differentiation 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Myog myogenin involved_in ISS
IBA
IEA
ISO		 GO_REF:0000024
GO_REF:0000033
GO_REF:0000107
(MGI:62381|PMID:8393145)		 UniProt
GO_Central
Ensembl
RGD		 PMID:8393145 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:62381 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039 		JBrowse link
G Shox2 SHOX homeobox 2 involved_in ISO
IEA		 (MGI:4946446|PMID:21156168)
GO_REF:0000107		 RGD
Ensembl		 PMID:21156168 GO_REF:0000107 MGI:4946446 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
positive regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbm24 RNA binding motif protein 24 involved_in ISO (MGI:6148527|PMID:25313962) RGD PMID:25313962 MGI:6148527 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
positive regulation of tongue muscle cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in ISO (MGI:3809313|PMID:18816858) RGD PMID:18816858 MGI:3809313 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628 		JBrowse link
G Tbx1 T-box transcription factor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3809313|PMID:18816858)		 UniProt
RGD		 PMID:18816858 GO_REF:0000024 MGI:3809313 NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380 		JBrowse link
regulation of myoblast fusion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myog myogenin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5508727|PMID:21465538)		 UniProt
Ensembl
RGD		 PMID:21465538 GO_REF:0000024 GO_REF:0000107 MGI:5508727 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039 		JBrowse link
G Plekho1 pleckstrin homology domain containing O1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:183,544,487...183,552,928
Ensembl chr 2:183,544,499...183,552,785 		JBrowse link
regulation of myotube differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmpk DM1 protein kinase involved_in ISO (MGI:3806406|PMID:18729234) RGD PMID:18729234 MGI:3806406 NCBI chr 1:78,730,255...78,740,585
Ensembl chr 1:78,730,275...78,740,593 		JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (PMID:19319192) RGD PMID:19319192 NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148 		JBrowse link
G Hdac5 histone deacetylase 5 involved_in ISO (MGI:3712602|PMID:17468767) RGD PMID:17468767 MGI:3712602 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235 		JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (MGI:4999688|PMID:20977548) RGD PMID:20977548 MGI:4999688 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102 		JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (MGI:4438547|PMID:19817877) RGD PMID:19817877 MGI:4438547 NCBI chr 3:161,801,577...161,814,381
Ensembl chr 3:161,801,577...161,814,381 		JBrowse link
G Sik1 salt-inducible kinase 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3712602|PMID:17468767)		 UniProt
Ensembl
RGD		 PMID:17468767 GO_REF:0000024 GO_REF:0000107 MGI:3712602 NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991 		JBrowse link
regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo22 F-box protein 22 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:19319192)		 GO_Central
RGD		 PMID:19319192 GO_REF:0000033 NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148 		JBrowse link
G Hdac4 histone deacetylase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1333784|MGI:1931221 (PMID:17786239)		 Ensembl
RGD		 PMID:17786239 GO_REF:0000107 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164 		JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO MGI:1931221|MGI:3036234 (PMID:17786239) RGD PMID:17786239 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235 		JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO MGI:1333784|MGI:3036284 (PMID:17786239) RGD PMID:17786239 NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333 		JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:468,862...481,992
Ensembl chr 7:469,723...481,992 		JBrowse link
regulation of skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac4 histone deacetylase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1333784|MGI:1931221 (PMID:17786239)		 Ensembl
RGD		 PMID:17786239 GO_REF:0000107 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164 		JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO MGI:1931221|MGI:3036234 (PMID:17786239) RGD PMID:17786239 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235 		JBrowse link
G Hdac9 histone deacetylase 9 acts_upstream_of_or_within ISO MGI:1333784|MGI:3036284 (PMID:17786239) RGD PMID:17786239 NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333 		JBrowse link
G Nln neurolysin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4125183 (PMID:24719333)		 Ensembl
RGD		 PMID:24719333 GO_REF:0000107 NCBI chr 2:35,133,634...35,232,927
Ensembl chr 2:35,134,145...35,232,914 		JBrowse link
skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin, alpha 1, skeletal muscle involved_in ISS
ISO		 GO_REF:0000024
(MGI:78319|PMID:2731651)		 UniProt
RGD		 PMID:2731651 GO_REF:0000024 MGI:78319 NCBI chr19:51,883,709...51,886,735
Ensembl chr19:51,883,715...51,886,742 		JBrowse link
G Actn1 actinin, alpha 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 6:98,998,553...99,093,334
Ensembl chr 6:98,998,556...99,093,251 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1857134 (PMID:11146504)		 Ensembl
RGD		 PMID:11146504 GO_REF:0000107 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bin3 bridging integrator 3 acts_upstream_of_or_within ISO MGI:3512131 (PMID:23872330) RGD PMID:23872330 NCBI chr15:45,173,725...45,212,607
Ensembl chr15:45,173,732...45,212,604 		JBrowse link
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin involved_in ISO (PMID:30735131) MGI
RGD		 PMID:30735131 NCBI chr 1:205,731,828...205,743,430
Ensembl chr 1:205,733,872...205,743,421 		JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856326 (PMID:289331), (PMID:8143864), (PMID:8462749)		 Ensembl
RGD		 PMID:289331 PMID:8143864 PMID:8462749 GO_REF:0000107 NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318 		JBrowse link
G Cav2 caveolin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:2180372 (PMID:17200204)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:17200204 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:45,616,766...45,624,144
Ensembl chr 4:45,616,712...45,624,244 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2153356 (PMID:21037586) RGD PMID:21037586 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Dner delta/notch-like EGF repeat containing acts_upstream_of_or_within ISO (PMID:15965470) RGD PMID:15965470 NCBI chr 9:85,586,985...85,902,461
Ensembl chr 9:85,586,987...85,902,637 		JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2158814 (PMID:16962942)		 Ensembl
RGD		 PMID:16962942 GO_REF:0000107 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024 		JBrowse link
G Homer1 homer scaffold protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3526529 (PMID:18268005)		 Ensembl
RGD		 PMID:18268005 GO_REF:0000107 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785 		JBrowse link
G Kel Kell metallo-endopeptidase (Kell blood group) acts_upstream_of_or_within ISO MGI:103569 (PMID:24405768) RGD PMID:24405768 NCBI chr 4:70,568,241...70,585,666
Ensembl chr 4:70,568,243...70,585,631 		JBrowse link
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (MGI:5700633|PMID:25940086)
MGI:4843038 (PMID:24960163)
GO_REF:0000033		 RGD
GO_Central		 PMID:24960163 PMID:25940086 GO_REF:0000033 MGI:5700633 NCBI chr 8:121,441,285...121,446,801
Ensembl chr 8:121,441,287...121,446,800 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:3510641 (PMID:16111892) RGD PMID:16111892 NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (MGI:5644091|PMID:25774500), (MGI:5648755|PMID:26035871) RGD PMID:25774500 PMID:26035871 MGI:5644091 MGI:5648755 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244 		JBrowse link
G Myod1 myogenic differentiation 1 acts_upstream_of_or_within ISO (PMID:19319192) RGD PMID:19319192 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554 		JBrowse link
G Myog myogenin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857667 (PMID:8393145)		 Ensembl
RGD		 PMID:8393145 GO_REF:0000107 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039 		JBrowse link
G Myorg myogenesis regulating glycosidase involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:19706595)
GO_REF:0000033		 RGD
GO_Central		 PMID:19706595 GO_REF:0000033 NCBI chr 5:56,654,257...56,664,467
Ensembl chr 5:56,648,643...56,664,440 		JBrowse link
G Nfatc3 nuclear factor of activated T-cells 3 acts_upstream_of_or_within ISO MGI:2182778 (PMID:11254352) RGD PMID:11254352 NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150 		JBrowse link
G P2rx2 purinergic receptor P2X 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2687349 (PMID:17706883)		 Ensembl
RGD		 PMID:17706883 GO_REF:0000107 NCBI chr12:46,338,979...46,342,891
Ensembl chr12:46,339,549...46,342,891 		JBrowse link
G Plec plectin involved_in IEA
ISO		 GO_REF:0000107
MGI:3799315 (PMID:18490514), (PMID:24487589)		 Ensembl
RGD		 PMID:18490514 PMID:24487589 GO_REF:0000107 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467 		JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:16024798)
(MGI:3641363|PMID:12773574)		 UniProt
RGD		 PMID:12773574 PMID:16024798 GO_REF:0000024 MGI:3641363 NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974 		JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:3641363|PMID:12773574)		 UniProt
Ensembl
RGD		 PMID:12773574 GO_REF:0000024 GO_REF:0000107 MGI:3641363 NCBI chr15:3,759,950...3,804,976
Ensembl chr15:3,760,030...3,804,981 		JBrowse link
G Rcan1 regulator of calcineurin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16024798)		 Ensembl
RGD		 PMID:16024798 GO_REF:0000107 NCBI chr11:31,622,208...31,702,150
Ensembl chr11:31,622,210...31,702,045 		JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3764002|PMID:18003898)		 UniProt
RGD		 PMID:18003898 GO_REF:0000024 MGI:3764002 NCBI chr 1:84,292,578...84,423,824
Ensembl chr 1:84,292,578...84,423,812 		JBrowse link
G Selenon selenoprotein N involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:23325319)		 GO_Central
RGD		 PMID:23325319 GO_REF:0000033 NCBI chr 5:146,748,638...146,764,656
Ensembl chr 5:146,748,652...146,763,059 		JBrowse link
G Six1 SIX homeobox 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975 		JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (PMID:9284043) RGD PMID:9284043 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Smo smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176256|MGI:3573783 (PMID:22987639)		 Ensembl
RGD		 PMID:22987639 GO_REF:0000107 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin acts_upstream_of_or_within ISO MGI:6451766 (PMID:28237315) RGD PMID:28237315 NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911 		JBrowse link
G Stac3 SH3 and cysteine rich domain 3 acts_upstream_of_or_within ISO (PMID:23626854) RGD PMID:23626854 NCBI chr 7:63,343,078...63,350,590
Ensembl chr 7:63,343,186...63,350,589 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (PMID:15673614) RGD PMID:15673614 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892 		JBrowse link
G Xk X-linked Kx blood group antigen, Kell and VPS13A binding protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1346053 (PMID:24405768)		 Ensembl
RGD		 PMID:24405768 GO_REF:0000107 NCBI chr  X:13,436,412...13,472,830
Ensembl chr  X:13,436,418...13,472,830 		JBrowse link
skeletal muscle fiber differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4galnt2 beta-1,4-N-acetyl-galactosaminyl transferase 2 acts_upstream_of_or_within ISO (PMID:27561302) RGD PMID:27561302 NCBI chr10:80,801,594...80,828,005
Ensembl chr10:80,802,941...80,857,700 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2145814 (PMID:19293339) RGD PMID:19293339 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4834518 (PMID:27561302) RGD PMID:27561302 NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992 		JBrowse link
G Fktn fukutin acts_upstream_of_or_within ISO MGI:5514346 (PMID:25661440) RGD PMID:25661440 NCBI chr 5:68,339,803...68,396,412
Ensembl chr 5:68,340,028...68,396,409 		JBrowse link
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within		 ISO (MGI:5700633|PMID:25940086)
(PMID:24361185)		 RGD PMID:24361185 PMID:25940086 MGI:5700633 NCBI chr 8:121,441,285...121,446,801
Ensembl chr 8:121,441,287...121,446,800 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within ISO MGI:1856965 (PMID:25661440) RGD PMID:25661440 NCBI chr19:11,603,129...12,048,930
Ensembl chr19:11,603,129...12,048,930 		JBrowse link
G Ppif peptidylprolyl isomerase F acts_upstream_of_or_within ISO MGI:88459 (PMID:19293339) RGD PMID:19293339 NCBI chr16:1,257,197...1,263,919
Ensembl chr16:1,257,106...1,263,913 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857796 (PMID:15238161)		 Ensembl
RGD		 PMID:15238161 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Six4 SIX homeobox 4 involved_in ISO (MGI:5298278|PMID:21884692) RGD PMID:21884692 MGI:5298278 NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    cellular process 18524
      cellular developmental process 4729
        cell differentiation 4728
          muscle cell differentiation 484
            striated muscle cell differentiation 363
              myotube differentiation 146
                myoblast fusion + 48
                myotube cell development + 50
                myotube differentiation involved in skeletal muscle regeneration + 9
                negative regulation of myotube differentiation + 19
                positive regulation of myotube differentiation + 15
                regulation of myotube differentiation + 48
                skeletal muscle fiber differentiation + 16
paths to the root