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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of cardiac muscle contraction by calcium ion signaling
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Accession:GO:0010882 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of cardiac muscle contraction by changing the calcium ion signals that trigger contraction.
Synonyms:exact_synonym: regulation of cardiac muscle contraction by calcium ion signalling


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regulation of cardiac muscle contraction by calcium ion signaling term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 ISO (PMID:12571597)
(MGI:MGI:2449848|PMID:12571597)
RGD PMID:12571597 MGI:MGI:2449848 NCBI chr 2:231,224,643...231,522,655
Ensembl chr 2:231,226,949...231,648,122
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 IC PMID:17442282 BHF-UCL PMID:17442282 RGD:6903343 NCBI chr13:90,651,682...90,676,629
Ensembl chr13:90,651,686...90,676,629
JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 ISO (MGI:MGI:4359299|PMID:19683723) RGD PMID:19683723 MGI:MGI:4359299 NCBI chr13:82,737,161...82,757,681
Ensembl chr13:82,737,159...82,758,004
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ISO
IBA
IDA
(PMID:10587333)
PMID:21873635
PMID:9851937
RGD PMID:10587333, PMID:21873635, PMID:9851937 RGD:13792537, RGD:10047146 NCBI chr12:39,553,903...39,603,326
Ensembl chr12:39,553,903...39,603,326
JBrowse link
G Hdac4 histone deacetylase 4 ISO (MGI:MGI:3793386|PMID:18250163) RGD PMID:18250163 MGI:MGI:3793386 NCBI chr 9:99,052,945...99,299,715
Ensembl chr 9:99,057,089...99,299,715
JBrowse link
G Ryr2 ryanodine receptor 2 ISO (PMID:17875969) RGD PMID:17875969 NCBI chr17:65,533,998...65,955,606
Ensembl chr17:65,535,403...65,955,606
JBrowse link
G Slc9a1 solute carrier family 9 member A1 ISO (PMID:15105296) RGD PMID:15105296 NCBI chr 5:151,573,122...151,626,360
Ensembl chr 5:151,573,092...151,627,316
JBrowse link
G Tnni3 troponin I3, cardiac type ISO (PMID:25771144) RGD PMID:25771144 NCBI chr 1:72,882,806...72,886,490
Ensembl chr 1:72,882,806...72,886,488
JBrowse link
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 ISO UniProtKB:Q8C8R3 (PMID:17178715)
(MGI:MGI:5427070|PMID:21859974), (MGI:MGI:5430893|PMID:17178715)
RGD PMID:17178715, PMID:21859974 MGI:MGI:5427070, MGI:MGI:5430893 NCBI chr 2:231,224,643...231,522,655
Ensembl chr 2:231,226,949...231,648,122
JBrowse link
G Asph aspartate-beta-hydroxylase ISO (PMID:17400717) RGD PMID:17400717 NCBI chr 5:22,577,680...22,799,333
Ensembl chr 5:22,577,675...22,799,349
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:150,635,808...151,270,790
Ensembl chr 4:150,641,066...150,829,913
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta IC PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chr 2:230,900,907...231,132,207
Ensembl chr 2:230,901,126...231,132,039
JBrowse link
G Casq2 calsequestrin 2 IMP
IBA
ISO
IEA
PMID:17569730
PMID:21873635
(MGI:MGI:1202079|PMID:9525981), (MGI:MGI:3689635|PMID:16932808)
(PMID:16601229), (PMID:16908766)
GO_REF:0000107
RGD
Ensembl
PMID:9525981, PMID:16601229, PMID:16908766, PMID:16932808, PMID:17569730, PMID:21873635 GO_REF:0000107, MGI:MGI:1202079, MGI:MGI:3689635, RGD:2314601, RGD:13792537 NCBI chr 2:204,512,361...204,568,643
Ensembl chr 2:204,512,302...204,568,656
JBrowse link
G Dmd dystrophin ISO (MGI:MGI:4420848|PMID:20080623) RGD PMID:20080623 MGI:MGI:4420848 NCBI chr  X:51,149,358...53,519,271
Ensembl chr  X:51,286,737...53,519,259
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B ISO
IBA
(MGI:MGI:3621834|PMID:12837242)
PMID:21873635
RGD PMID:12837242, PMID:21873635 MGI:MGI:3621834, RGD:13792537 NCBI chr 6:29,975,863...29,987,252
Ensembl chr 6:29,977,797...29,987,451
JBrowse link
G Pln phospholamban ISO MGI:MGI:2158357 (MGI:MGI:82999|PMID:8831698) RGD PMID:8831698 MGI:MGI:82999 NCBI chr20:34,633,157...34,642,904
Ensembl chr20:34,633,157...34,642,904
JBrowse link
G Ryr2 ryanodine receptor 2 ISO
IEA
UniProtKB:Q9Z2I2 (MGI:MGI:3621834|PMID:12837242)
GO_REF:0000107
RGD
Ensembl
PMID:12837242 GO_REF:0000107, MGI:MGI:3621834 NCBI chr17:65,533,998...65,955,606
Ensembl chr17:65,535,403...65,955,606
JBrowse link
G Slc8a1 solute carrier family 8 member A1 IDA PMID:21779914 BHF-UCL PMID:21779914 RGD:8554732 NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
JBrowse link
G Tmem38a transmembrane protein 38a ISO
IEA
MGI:MGI:1098718 (MGI:MGI:3715564|PMID:17611541)
GO_REF:0000107
RGD
Ensembl
PMID:17611541 GO_REF:0000107, MGI:MGI:3715564 NCBI chr16:18,960,197...18,974,942
Ensembl chr16:18,959,315...18,974,770
JBrowse link
G Tmem38b transmembrane protein 38B ISO MGI:MGI:1921416 (MGI:MGI:3715564|PMID:17611541) RGD PMID:17611541 MGI:MGI:3715564 NCBI chr 5:70,639,156...70,675,055
Ensembl chr 5:70,639,156...70,675,054
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20027
    signaling 7583
      signal transduction 7011
        intracellular signal transduction 2594
          second-messenger-mediated signaling 467
            calcium-mediated signaling 217
              regulation of cardiac muscle contraction by calcium ion signaling 18
                regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion 12
Path 2
Term Annotations click to browse term
  biological_process 20027
    biological regulation 13773
      regulation of biological process 13075
        regulation of multicellular organismal process 2914
          regulation of system process 648
            regulation of muscle system process 266
              regulation of muscle contraction 169
                regulation of striated muscle contraction 91
                  regulation of cardiac muscle contraction 76
                    regulation of cardiac muscle contraction by calcium ion signaling 18
                      regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion 12
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.