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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
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Accession:GO:0010880 term browser browse the term
Definition:Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.


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regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calm1 calmodulin 1 ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004955438:12,842,437...12,854,028
Ensembl chrNW_004955438:12,842,437...12,854,028
JBrowse link
G Calm2 calmodulin 2 ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004955441:13,973,147...13,988,665 JBrowse link
G Calm3 calmodulin 3 ISO (PMID:20226167) BHF-UCL PMID:20226167 NCBI chrNW_004955574:672,441...680,924
Ensembl chrNW_004955574:672,300...680,924
JBrowse link
G Camk2d calcium/calmodulin dependent protein kinase II delta ISO PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chrNW_004955428:25,583,501...25,880,395 JBrowse link
G Casq1 calsequestrin 1 ISO (MGI:MGI:2449410|PMID:12419813)
(MGI:MGI:3814667|PMID:17627988)
MGI PMID:12419813, PMID:17627988 MGI:MGI:2449410, MGI:MGI:3814667 NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836
JBrowse link
G Casq2 calsequestrin 2 ISO (PMID:15041652)
(MGI:MGI:3689635|PMID:16932808)
BHF-UCL
UniProtKB
PMID:15041652, PMID:16932808 MGI:MGI:3689635 NCBI chrNW_004955435:18,941,975...18,996,027
Ensembl chrNW_004955435:18,941,936...18,996,200
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO (MGI:MGI:5694290|PMID:26102480) MGI PMID:26102480 MGI:MGI:5694290 NCBI chrNW_004955444:17,859,999...18,067,623
Ensembl chrNW_004955444:17,858,771...18,067,248
JBrowse link
G Clic2 chloride intracellular channel 2 ISO (PMID:15147738), (PMID:15916532) BHF-UCL PMID:15147738, PMID:15916532 NCBI chrNW_004955594:374,332...393,802
Ensembl chrNW_004955594:374,208...393,389
JBrowse link
G Dhrs7c dehydrogenase/reductase 7C ISO (MGI:MGI:5306721|PMID:21995425) MGI PMID:21995425 MGI:MGI:5306721 NCBI chrNW_004955467:7,330,267...7,341,897
Ensembl chrNW_004955467:7,330,188...7,342,053
JBrowse link
G Dmd dystrophin ISO (MGI:MGI:4420848|PMID:20080623), (MGI:MGI:5487906|PMID:23263329) BHF-UCL PMID:20080623, PMID:23263329 MGI:MGI:4420848, MGI:MGI:5487906 NCBI chrNW_004955535:1,283,084...3,297,015
Ensembl chrNW_004955535:1,283,523...3,299,542
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B ISO (PMID:20431056)
(MGI:MGI:3639647|PMID:16672364)
(MGI:MGI:3028710|PMID:14592808), (MGI:MGI:5007884|PMID:19578067)
BHF-UCL
MGI
PMID:14592808, PMID:16672364, PMID:19578067, PMID:20431056 MGI:MGI:3028710, MGI:MGI:3639647, MGI:MGI:5007884 NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767
JBrowse link
G Hrc histidine rich calcium binding protein ISO (PMID:24125847) BHF-UCL PMID:24125847 NCBI chrNW_004955559:1,583,661...1,587,457
Ensembl chrNW_004955559:1,583,876...1,587,355
JBrowse link
G Mettl21c methyltransferase like 21C ISO (MGI:MGI:5781029|PMID:24677265) MGI PMID:24677265 MGI:MGI:5781029 NCBI chrNW_004955404:8,447,359...8,460,853
Ensembl chrNW_004955404:8,447,359...8,460,847
JBrowse link
G Nol3 nucleolar protein 3 ISO PMID:23382383 UniProt PMID:23382383 RGD:10047354 NCBI chrNW_004955484:9,443,090...9,447,142
Ensembl chrNW_004955484:9,443,090...9,447,095
JBrowse link
G Pde4d phosphodiesterase 4D ISO (MGI:MGI:3690823|PMID:16213210) BHF-UCL PMID:16213210 MGI:MGI:3690823 NCBI chrNW_004955446:7,914,326...9,252,527
Ensembl chrNW_004955446:8,211,877...9,252,653
JBrowse link
G Pln phospholamban ISO (MGI:MGI:3655341|PMID:9118481) MGI PMID:9118481 MGI:MGI:3655341 NCBI chrNW_004955436:1,439,098...1,447,070
Ensembl chrNW_004955436:1,439,098...1,447,070
JBrowse link
G Trdn triadin ISO (PMID:15041652) BHF-UCL
RGD
PMID:15041652, PMID:17569730 RGD:2314601 NCBI chrNW_004955436:4,963,945...5,266,727 JBrowse link
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 ISO (MGI:MGI:5427070|PMID:21859974), (MGI:MGI:5430893|PMID:17178715)
(PMID:17178715)
BHF-UCL PMID:17178715, PMID:21859974 MGI:MGI:5427070, MGI:MGI:5430893 NCBI chrNW_004955457:13,624,590...13,938,427
Ensembl chrNW_004955457:13,624,413...14,076,261
JBrowse link
G Asph aspartate beta-hydroxylase ISO (PMID:17400717) BHF-UCL PMID:17400717 NCBI chrNW_004955444:17,116,060...17,320,966
Ensembl chrNW_004955444:17,121,559...17,318,295
JBrowse link
G Casq2 calsequestrin 2 ISO PMID:17569730
(PMID:16601229), (PMID:16908766)
(MGI:MGI:1202079|PMID:9525981)
(MGI:MGI:3689635|PMID:16932808)
BHF-UCL
MGI
UniProtKB
PMID:9525981, PMID:16601229, PMID:16908766, PMID:16932808, PMID:17569730 MGI:MGI:1202079, MGI:MGI:3689635, RGD:2314601 NCBI chrNW_004955435:18,941,975...18,996,027
Ensembl chrNW_004955435:18,941,936...18,996,200
JBrowse link
G Dmd dystrophin ISO (MGI:MGI:4420848|PMID:20080623) BHF-UCL PMID:20080623 MGI:MGI:4420848 NCBI chrNW_004955535:1,283,084...3,297,015
Ensembl chrNW_004955535:1,283,523...3,299,542
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B ISO (MGI:MGI:3621834|PMID:12837242) BHF-UCL PMID:12837242 MGI:MGI:3621834 NCBI chrNW_004955469:6,263,271...6,274,823
Ensembl chrNW_004955469:6,263,271...6,277,767
JBrowse link
G Pln phospholamban ISO (MGI:MGI:82999|PMID:8831698) MGI PMID:8831698 MGI:MGI:82999 NCBI chrNW_004955436:1,439,098...1,447,070
Ensembl chrNW_004955436:1,439,098...1,447,070
JBrowse link
G Ryr2 ryanodine receptor 2 ISO (MGI:MGI:3621834|PMID:12837242) BHF-UCL PMID:12837242 MGI:MGI:3621834 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO PMID:21779914 BHF-UCL PMID:21779914 RGD:8554732 NCBI chrNW_004955441:7,653,107...8,037,784
Ensembl chrNW_004955441:7,656,031...7,957,640
JBrowse link
G Tmem38a transmembrane protein 38A ISO (MGI:MGI:3715564|PMID:17611541) MGI PMID:17611541 MGI:MGI:3715564 NCBI chrNW_004955524:1,132,111...1,144,335
Ensembl chrNW_004955524:1,132,111...1,144,380
JBrowse link
G Tmem38b transmembrane protein 38B ISO (MGI:MGI:3715564|PMID:17611541) MGI PMID:17611541 MGI:MGI:3715564 NCBI chrNW_004955419:20,811,931...20,844,420
Ensembl chrNW_004955419:20,812,702...20,878,599
JBrowse link
regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casq1 calsequestrin 1 ISO (MGI:MGI:5306707|PMID:22049211)
(MGI:MGI:3814667|PMID:17627988)
UniProtKB
MGI
PMID:17627988, PMID:22049211 MGI:MGI:3814667, MGI:MGI:5306707 NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836
JBrowse link
G Dmd dystrophin ISO (MGI:MGI:3837615|PMID:19198614) BHF-UCL PMID:19198614 MGI:MGI:3837615 NCBI chrNW_004955535:1,283,084...3,297,015
Ensembl chrNW_004955535:1,283,523...3,299,542
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11892
    biological regulation 8722
      regulation of biological quality 3365
        regulation of calcium ion transport into cytosol 109
          regulation of release of sequestered calcium ion into cytosol 82
            regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum 23
              regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion 10
              regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion + 2
Path 2
Term Annotations click to browse term
  biological_process 11892
    biological regulation 8722
      regulation of biological quality 3365
        homeostatic process 1718
          chemical homeostasis 1052
            ion homeostasis 688
              cellular ion homeostasis 547
                cellular cation homeostasis 535
                  cellular metal ion homeostasis 487
                    cellular calcium ion homeostasis 401
                      regulation of cytosolic calcium ion concentration 308
                        positive regulation of cytosolic calcium ion concentration 270
                          calcium ion transport into cytosol 155
                            calcium ion transmembrane import into cytosol 132
                              release of sequestered calcium ion into cytosol 108
                                release of sequestered calcium ion into cytosol by endoplasmic reticulum 25
                                  release of sequestered calcium ion into cytosol by sarcoplasmic reticulum 24
                                    regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum 23
                                      regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion 10
                                      regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion + 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.