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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of cell-substrate adhesion
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Accession:GO:0010811 term browser browse the term
Definition:Any process that increases the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.



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positive regulation of cell-substrate adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi3bp ABI family member 3 binding protein acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3807344|PMID:18757743)
PMID:21873635
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
JBrowse link
G Agr2 anterior gradient 2, protein disulphide isomerase family member involved_in ISO (PMID:23274113) RGD PMID:23274113 NCBI chr 6:52,708,602...52,729,378
Ensembl chr 6:52,708,602...52,729,371
JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in ISO
ISS
(PMID:11278875)
GO_REF:0000024
RGD
UniProt
PMID:11278875 GO_REF:0000024 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874
JBrowse link
G Arl2 ADP-ribosylation factor like GTPase 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:203,434,129...203,446,156
Ensembl chr 1:203,434,129...203,446,119
JBrowse link
G Ccdc80 coiled-coil domain containing 80 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3807344|PMID:18757743)
PMID:21873635
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr11:55,685,165...55,718,827
Ensembl chr11:55,685,872...55,719,137
JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
JBrowse link
G Col26a1 collagen type XXVI alpha 1 chain acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr12:19,792,693...19,938,556
Ensembl chr12:19,792,728...19,938,556
JBrowse link
G Col8a1 collagen type VIII alpha 1 chain acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424
JBrowse link
G Dbn1 drebrin 1 IDA RGD PMID:7478237 RGD:10398730 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323
JBrowse link
G Ecm2 extracellular matrix protein 2 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr17:15,120,194...15,152,536
Ensembl chr17:15,120,196...15,152,516
JBrowse link
G Edil3 EGF like repeats and discoidin domains 3 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 2:19,890,396...20,405,028
Ensembl chr 2:19,890,373...20,405,008
JBrowse link
G Egfl6 EGF-like-domain, multiple 6 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr  X:27,884,087...27,942,044
Ensembl chr  X:27,884,125...27,942,044
JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 2:56,301,945...56,476,665
Ensembl chr 2:56,302,566...56,476,298
JBrowse link
G Emilin1 elastin microfibril interfacer 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 6:25,455,974...25,463,736
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
G Fbln2 fibulin 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 4:123,704,289...123,763,857
Ensembl chr 4:123,704,373...123,763,948
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:2179135 (MGI:3709924|PMID:17261592) RGD PMID:17261592 MGI:3709924 NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
G Hacd1 3-hydroxyacyl-CoA dehydratase 1 involved_in ISO (PMID:22067203) RGD PMID:22067203 NCBI chr17:77,081,508...77,106,114
Ensembl chr17:77,083,740...77,106,073
JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 3:79,990,048...80,113,556
Ensembl chr 3:79,990,056...80,113,617
JBrowse link
G Itga3 integrin subunit alpha 3 IMP RGD PMID:2223092 RGD:2325828 NCBI chr10:79,990,160...80,022,206
Ensembl chr10:79,990,161...80,022,118
JBrowse link
G Itga5 integrin subunit alpha 5 IMP RGD PMID:18167060 RGD:2314623 NCBI chr 7:134,478,963...134,502,837
Ensembl chr 7:134,478,968...134,502,837
JBrowse link
G Itga6 integrin subunit alpha 6 IMP RGD PMID:13130099 RGD:1302259 NCBI chr 3:56,604,512...56,689,428
Ensembl chr 3:56,617,268...56,689,428
JBrowse link
G Itgb1 integrin subunit beta 1 IMP RGD PMID:18167060 PMID:19705458 RGD:2314623, RGD:2325329 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Jak2 Janus kinase 2 involved_in ISO (PMID:10925297) RGD PMID:10925297 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G L1cam L1 cell adhesion molecule IDA RGD PMID:8636223 RGD:11570518 NCBI chr  X:151,597,270...151,623,776
Ensembl chr  X:151,597,277...151,623,857
JBrowse link
G Lims1 LIM zinc finger domain containing 1 involved_in ISO (PMID:20926685) RGD PMID:20926685 NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500
JBrowse link
G Ndnf neuron-derived neurotrophic factor acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 4:94,944,749...94,987,414
Ensembl chr 4:94,944,360...94,981,873
JBrowse link
G Nid1 nidogen 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3807344|PMID:18757743)
Ensembl
RGD
PMID:18757743 GO_REF:0000107 MGI:3807344 NCBI chr17:86,085,046...86,158,277
Ensembl chr17:86,085,077...86,158,267
JBrowse link
G Npnt nephronectin acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
JBrowse link
G Npy neuropeptide Y IDA RGD PMID:15342191 RGD:1580787 NCBI chr 4:78,881,294...78,888,495
Ensembl chr 4:78,881,264...78,888,495
JBrowse link
G Npy2r neuropeptide Y receptor Y2 IDA RGD PMID:15342191 RGD:1580787 NCBI chr 2:167,901,999...167,912,165
Ensembl chr 2:167,903,879...167,905,024
JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in IEA
ISO
GO_REF:0000107
(PMID:19126672)
Ensembl
RGD
PMID:19126672 GO_REF:0000107 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F involved_in ISO
ISS
(PMID:20016286)
GO_REF:0000024
RGD
UniProt
PMID:20016286 GO_REF:0000024 NCBI chr11:84,064,422...84,094,410
Ensembl chr11:84,064,420...84,094,340
JBrowse link
G Prkce protein kinase C, epsilon acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3524969|MGI:87963 (MGI:3618446|PMID:15949469)
GO_REF:0000107
RGD
Ensembl
PMID:15949469 GO_REF:0000107 MGI:3618446 NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
JBrowse link
G Ptn pleiotrophin IDA RGD PMID:7925491 RGD:9834943 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO UniProtKB:P48059|UniProtKB:Q15404 (PMID:20926685) RGD PMID:20926685 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rell2 RELT-like 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr18:29,789,996...29,793,986
Ensembl chr18:29,790,415...29,793,986
JBrowse link
G Rsu1 Ras suppressor protein 1 involved_in ISO (PMID:20926685) RGD PMID:20926685 NCBI chr17:76,128,774...76,377,515
Ensembl chr17:76,188,812...76,377,454
JBrowse link
G Smoc1 SPARC related modular calcium binding 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 6:100,701,330...100,897,441
Ensembl chr 6:100,701,346...100,862,699
JBrowse link
G Smoc2 SPARC related modular calcium binding 2 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 1:55,262,472...55,391,804
Ensembl chr 1:55,262,530...55,391,693
JBrowse link
G Spock2 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr20:28,036,909...28,064,272
Ensembl chr20:28,033,475...28,064,272
JBrowse link
G Spp1 secreted phosphoprotein 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162
JBrowse link
G Thbs1 thrombospondin 1 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr 3:105,056,286...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
G Vit vitrin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3807344|PMID:18757743)
RGD PMID:18757743 PMID:21873635 MGI:3807344, RGD:13792537 NCBI chr 6:16,445,966...16,565,644
Ensembl chr 6:16,445,955...16,565,665
JBrowse link
G Vtn vitronectin acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr10:63,394,732...63,397,812
Ensembl chr10:63,394,719...63,397,810
JBrowse link
G Vwc2 von Willebrand factor C domain containing 2 acts_upstream_of_or_within ISO (MGI:3807344|PMID:18757743) RGD PMID:18757743 MGI:3807344 NCBI chr14:85,683,670...85,825,068
Ensembl chr14:85,684,414...85,818,524
JBrowse link
positive regulation of cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:15569314), (PMID:18308860) RGD PMID:15569314 PMID:18308860 NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
JBrowse link
G Ccl25 C-C motif chemokine ligand 25 involved_in ISO (PMID:18308860) RGD PMID:18308860 NCBI chr12:2,707,398...2,716,571
Ensembl chr12:2,707,398...2,716,554
JBrowse link
G Ccl28 C-C motif chemokine ligand 28 involved_in ISO
IBA
(PMID:18308860)
PMID:21873635
RGD PMID:18308860 PMID:21873635 RGD:13792537 NCBI chr 2:51,601,354...51,625,999
Ensembl chr 2:51,601,331...51,625,997
JBrowse link
G Cd36 CD36 molecule involved_in ISO
IEA
(PMID:17416590)
GO_REF:0000107
RGD
Ensembl
PMID:17416590 GO_REF:0000107 NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Cd36-ps1 CD36 molecule, pseudogene 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:17,487,837...17,514,900 JBrowse link
G Cd3e CD3 epsilon subunit of T-cell receptor complex involved_in ISO UniProtKB:Q86WV1 (MGI:6201899|PMID:12652296) RGD PMID:12652296 MGI:6201899 NCBI chr 8:45,303,848...45,315,297
Ensembl chr 8:45,303,852...45,315,022
JBrowse link
G Cdh13 cadherin 13 involved_in ISO (PMID:17573778) RGD PMID:17573778 NCBI chr19:46,349,562...47,387,462
Ensembl chr19:46,349,430...47,387,459
JBrowse link
G Cdk6 cyclin-dependent kinase 6 involved_in ISO (PMID:10205165) RGD PMID:10205165 NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634
JBrowse link
G Cib1 calcium and integrin binding 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5314162|PMID:22128142)
UniProt
RGD
PMID:22128142 GO_REF:0000024 MGI:5314162 NCBI chr 1:134,178,331...134,183,895
Ensembl chr 1:134,178,331...134,213,423
JBrowse link
G Csf1 colony stimulating factor 1 acts_upstream_of_or_within ISO MGI:97306 (MGI:3689489|PMID:17053831) RGD PMID:17053831 MGI:3689489 NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
JBrowse link
G Dag1 dystroglycan 1 IMP RGD PMID:9153251 RGD:11541058 NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
JBrowse link
G Disc1 DISC1 scaffold protein IMP RGD PMID:20479754 RGD:5509803 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Dmd dystrophin involved_in ISO (MGI:5486568|PMID:12370193) RGD PMID:12370193 MGI:5486568 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Emp2 epithelial membrane protein 2 acts_upstream_of_or_within ISO (PMID:16216233) RGD PMID:16216233 NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Epha1 Eph receptor A1 involved_in ISO (PMID:19118217) RGD PMID:19118217 NCBI chr 4:71,246,409...71,260,920
Ensembl chr 4:71,246,409...71,260,846
JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (MGI:5571208|PMID:24681597) RGD PMID:24681597 MGI:5571208 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Fut1 fucosyltransferase 1 involved_in ISO
ISS
(PMID:18205178)
GO_REF:0000024
RGD
UniProt
PMID:18205178 GO_REF:0000024 NCBI chr 1:96,086,934...96,090,352
Ensembl chr 1:96,086,635...96,090,616
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
IEA
(PMID:18156211)
GO_REF:0000107
RGD
Ensembl
PMID:18156211 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hpse heparanase involved_in ISO (PMID:12773484) RGD PMID:12773484 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Ilk integrin-linked kinase IMP RGD PMID:18535176 RGD:2301740 NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2175913 (MGI:5462513|PMID:22984613)
GO_REF:0000107
RGD
Ensembl
PMID:22984613 GO_REF:0000107 MGI:5462513 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Jup junction plakoglobin involved_in ISO RNAcentral:URS00005A31EB_9606 (PMID:28115160) RGD PMID:28115160 NCBI chr10:85,300,438...85,327,378
Ensembl chr10:85,300,440...85,327,057
JBrowse link
G Ninj1 ninjurin 1 acts_upstream_of_or_within ISO (MGI:4940188|PMID:19557008) RGD PMID:19557008 MGI:4940188 NCBI chr17:15,452,804...15,461,684
Ensembl chr17:15,452,813...15,461,704
JBrowse link
G Plekha2 pleckstrin homology domain containing A2 involved_in ISO (PMID:19786618) RGD PMID:19786618 NCBI chr16:66,938,684...67,000,661
Ensembl chr16:66,939,109...66,999,395
JBrowse link
G Prkcz protein kinase C, zeta IMP vascular smooth muscle cell adhesion to collagen matrix RGD PMID:16113073 RGD:1642674 NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISO
ISS
(PMID:18765415)
GO_REF:0000024
RGD
UniProt
PMID:18765415 GO_REF:0000024 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO (MGI:4942250|PMID:12833140) RGD PMID:12833140 MGI:4942250 NCBI chr 3:76,405,917...76,561,842
Ensembl chr 3:76,405,927...76,562,260
JBrowse link
G RGD1565355 similar to fatty acid translocase/CD36 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:17,424,749...17,465,808
Ensembl chr 4:17,354,466...17,513,903
JBrowse link
G Skap1 src kinase associated phosphoprotein 1 involved_in ISO UniProtKB:P22646 (PMID:12652296) RGD PMID:12652296 NCBI chr10:81,425,472...81,732,651
Ensembl chr10:81,425,525...81,732,650
JBrowse link
G Spg7 SPG7 matrix AAA peptidase subunit, paraplegin involved_in ISO (PMID:1560826) RGD PMID:1560826 NCBI chr19:51,117,045...51,151,228
Ensembl chr19:51,117,057...51,150,484
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO MGI:1857518 (MGI:1321047|PMID:9876177) RGD PMID:9876177 MGI:1321047 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 IMP
IDA
RGD PMID:29331667 PMID:29331667 RGD:127284861, RGD:127284861 NCBI chr 9:12,763,819...12,779,285
Ensembl chr 9:12,763,819...12,779,203
JBrowse link
G Utrn utrophin involved_in ISO
IEA
(PMID:19786618)
GO_REF:0000107
RGD
Ensembl
PMID:19786618 GO_REF:0000107 NCBI chr 1:6,720,854...7,224,313
Ensembl chr 1:6,722,594...7,224,313
JBrowse link
G Vegfc vascular endothelial growth factor C acts_upstream_of_or_within ISO (MGI:4820931|PMID:20415667) RGD PMID:20415667 MGI:4820931 NCBI chr16:37,712,408...37,827,657
Ensembl chr16:37,712,262...37,827,848
JBrowse link
positive regulation of endothelial cell-matrix adhesion via fibronectin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam6 CEA cell adhesion molecule 6 involved_in ISO (PMID:16204051) RGD PMID:16204051 NCBI chr 1:80,416,531...80,434,668
Ensembl chr 1:80,416,531...80,434,668
JBrowse link
G Dicer1 dicer 1 ribonuclease III IMP RGD PMID:23239824 RGD:149735901 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Fut1 fucosyltransferase 1 involved_in ISO
ISS
(PMID:18205178)
GO_REF:0000024
RGD
UniProt
PMID:18205178 GO_REF:0000024 NCBI chr 1:96,086,934...96,090,352
Ensembl chr 1:96,086,635...96,090,616
JBrowse link
G Gfus GDP-L-fucose synthase involved_in ISO (PMID:18205178) RGD PMID:18205178 NCBI chr 7:107,612,087...107,617,005
Ensembl chr 7:107,612,094...107,616,948
JBrowse link
G Rin2 Ras and Rab interactor 2 involved_in ISO (PMID:22825554) RGD PMID:22825554 NCBI chr 3:133,086,858...133,303,604
Ensembl chr 3:133,086,749...133,303,604
JBrowse link
G Rras RAS related involved_in ISO (PMID:22825554) RGD PMID:22825554 NCBI chr 1:95,500,582...95,504,362
Ensembl chr 1:95,500,566...95,504,357
JBrowse link
positive regulation of focal adhesion assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Cfl1 cofilin 1 IMP RGD PMID:24093776 RGD:11570550 NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
JBrowse link
G Col16a1 collagen type XVI alpha 1 chain involved_in ISO (PMID:24466237) RGD PMID:24466237 NCBI chr 5:142,388,376...142,442,825
Ensembl chr 5:142,388,426...142,442,825
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IDA RGD PMID:22139091 RGD:9685417 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO MGI:3822451 (MGI:3821807|PMID:18794329) RGD PMID:18794329 MGI:3821807 NCBI chr13:30,673,052...30,770,213
Ensembl chr13:30,669,764...30,768,360
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:29496737) RGD PMID:29496737 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Fmn1 formin 1 acts_upstream_of_or_within ISO MGI:3800994 (MGI:3798334|PMID:18560567) RGD PMID:18560567 MGI:3798334 NCBI chr 3:100,101,103...100,485,652
Ensembl chr 3:100,134,549...100,479,220
JBrowse link
G Hrg histidine-rich glycoprotein involved_in ISO
ISS
(PMID:14744774), (PMID:16436387)
GO_REF:0000024
RGD
UniProt
PMID:14744774 PMID:16436387 GO_REF:0000024 NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 IMP RGD PMID:23657573 RGD:11049552 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO (MGI:5486551|PMID:17654484) RGD PMID:17654484 MGI:5486551 NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
JBrowse link
G Kdr kinase insert domain receptor involved_in IEA
ISO
GO_REF:0000107
(PMID:12820653)
Ensembl
RGD
PMID:12820653 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Lims1 LIM zinc finger domain containing 1 involved_in ISO (PMID:20926685) RGD PMID:20926685 NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:78,039,371...78,049,353
Ensembl chr11:78,039,376...78,049,353
JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 involved_in ISO (MGI:6189265|PMID:25490267) RGD PMID:25490267 MGI:6189265 NCBI chr 9:42,200,708...42,326,708
Ensembl chr 9:42,200,278...42,326,698
JBrowse link
G Myh9 myosin, heavy chain 9 IMP RGD PMID:21598299 RGD:12798522 NCBI chr 7:109,343,718...109,424,457
Ensembl chr 7:109,343,706...109,424,457
JBrowse link
G Myoc myocilin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:18855004)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18855004 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128
Ensembl chr13:74,976,730...74,987,127
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 IMP RGD PMID:30354218 RGD:124713558 NCBI chr10:63,408,766...63,417,605
Ensembl chr10:63,407,213...63,417,605
JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent, 1F involved_in ISS
ISO
GO_REF:0000024
(PMID:20016286)
UniProt
RGD
PMID:20016286 GO_REF:0000024 NCBI chr11:84,064,422...84,094,410
Ensembl chr11:84,064,420...84,094,340
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 IMP RGD PMID:16905534 RGD:39456088 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
JBrowse link
G Ptprj protein tyrosine phosphatase, receptor type, J involved_in ISO (PMID:21091576) RGD PMID:21091576 NCBI chr 3:76,405,917...76,561,842
Ensembl chr 3:76,405,927...76,562,260
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO
IEA
(PMID:23129259)
GO_REF:0000107
RGD
Ensembl
PMID:23129259 GO_REF:0000107 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5486551|PMID:17654484)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17654484 GO_REF:0000024 GO_REF:0000107 MGI:5486551 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO (PMID:23129259) RGD PMID:23129259 NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:179,220,887...179,229,661
JBrowse link
G Sdc4 syndecan 4 IMP RGD PMID:10504291 RGD:2312327 NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580
JBrowse link
G Smad3 SMAD family member 3 IDA RGD PMID:15987742 RGD:2300418 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Tek TEK receptor tyrosine kinase involved_in ISO (PMID:18425120) RGD PMID:18425120 NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISO
ISS
(PMID:18346467)
(MGI:3796911|PMID:18346467)
RGD PMID:18346467 PMID:18346467 MGI:3796911, RGD:12793016 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in ISO (PMID:10806479) RGD PMID:10806479 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
ISS
(PMID:16489009)
GO_REF:0000024
RGD
UniProt
PMID:16489009 GO_REF:0000024 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Wnt4 Wnt family member 4 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P01112 (MGI:5487484|PMID:23027131)
Ensembl
RGD
PMID:23027131 GO_REF:0000107 MGI:5487484 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
positive regulation of smooth muscle cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efemp2 EGF containing fibulin extracellular matrix protein 2 involved_in ISO (PMID:23782690) RGD PMID:23782690 NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 IMP RGD PMID:14970114 RGD:11556214 NCBI chr 1:214,837,847...215,267,626
Ensembl chr 1:214,837,927...215,267,600
JBrowse link
positive regulation of substrate adhesion-dependent cell spreading term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Apoa1 apolipoprotein A1 involved_in ISO
IEA
(PMID:23726972)
GO_REF:0000107
RGD
Ensembl
PMID:23726972 GO_REF:0000107 NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035
JBrowse link
G Arhgef7 Rho guanine nucleotide exchange factor 7 involved_in ISO (PMID:21423176) UniProt PMID:21423176 NCBI chr16:77,671,021...77,782,593
Ensembl chr16:77,671,023...77,782,697
JBrowse link
G Arpc2 actin related protein 2/3 complex, subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5429457|PMID:22689987)
Ensembl
RGD
PMID:22689987 GO_REF:0000107 MGI:5429457 NCBI chr 9:75,820,782...75,851,471
Ensembl chr 9:75,820,770...75,851,471
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:3047520|PMID:15199148) RGD PMID:15199148 MGI:3047520 NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
JBrowse link
G C1qbp complement C1q binding protein involved_in ISS
ISO
GO_REF:0000024
(PMID:11859136)
UniProt
RGD
PMID:11859136 GO_REF:0000024 NCBI chr10:55,699,954...55,704,605
Ensembl chr10:55,699,954...55,704,649
JBrowse link
G Calr calreticulin involved_in ISO (PMID:11859136) RGD PMID:11859136 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414
JBrowse link
G Carmil1 capping protein regulator and myosin 1 linker 1 involved_in ISO (PMID:16054028)
(MGI:3588909|PMID:16054028)
RGD PMID:16054028 MGI:3588909 NCBI chr17:40,807,921...41,088,326
Ensembl chr17:40,808,389...41,088,326
JBrowse link
G Cass4 Cas scaffold protein family member 4 involved_in ISO (PMID:18256281) RGD PMID:18256281 NCBI chr 3:161,162,520...161,202,523
Ensembl chr 3:161,163,436...161,202,186
JBrowse link
G Cdc42 cell division cycle 42 involved_in ISO
ISS
(PMID:11807099)
GO_REF:0000024
RGD
UniProt
PMID:11807099 GO_REF:0000024 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Cib1 calcium and integrin binding 1 involved_in ISO
ISS
(PMID:11756406)
GO_REF:0000024
RGD
UniProt
PMID:11756406 GO_REF:0000024 NCBI chr 1:134,178,331...134,183,895
Ensembl chr 1:134,178,331...134,213,423
JBrowse link
G Crk CRK proto-oncogene, adaptor protein involved_in ISO
ISS
(PMID:19004829)
GO_REF:0000024
RGD
UniProt
PMID:19004829 GO_REF:0000024 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (PMID:19004829) RGD PMID:19004829 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Cspg5 chondroitin sulfate proteoglycan 5 involved_in IMP PMID:16901907 UniProt PMID:16901907 RGD:14397555 NCBI chr 8:110,220,653...110,234,750
Ensembl chr 8:110,220,653...110,234,758
JBrowse link
G Dab2 DAB adaptor protein 2 involved_in IMP
ISO
(MGI:2158858|PMID:11823414), (MGI:5442513|PMID:15734730) RGD PMID:11823414 PMID:15734730 PMID:19000037 MGI:2158858 MGI:5442513, RGD:7243162 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
JBrowse link
G Dbn1 drebrin 1 IDA RGD PMID:7478237 RGD:10398730 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (MGI:5465511|PMID:23060452) RGD PMID:23060452 MGI:5465511 NCBI chr15:45,677,974...45,705,601
Ensembl chr15:45,677,977...45,705,601
JBrowse link
G Dnm2 dynamin 2 IMP RGD PMID:14617821 RGD:9685179 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
JBrowse link
G Dock1 dedicator of cyto-kinesis 1 involved_in ISO (PMID:19004829) RGD PMID:19004829 NCBI chr 1:189,467,143...189,983,777
Ensembl chr 1:189,467,143...189,983,768
JBrowse link
G Dock5 dedicator of cytokinesis 5 involved_in ISO (PMID:19004829) RGD PMID:19004829 NCBI chr15:41,979,728...42,158,733
Ensembl chr15:41,979,729...42,158,649
JBrowse link
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 IDA RGD PMID:22139091 RGD:9685417 NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO UniProtKB:Q13418 (PMID:30254023) RGD PMID:30254023 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
JBrowse link
G Flna filamin A involved_in ISO (PMID:18177638) RGD PMID:18177638 NCBI chr  X:152,007,758...152,034,266
Ensembl chr  X:152,007,758...152,031,052
JBrowse link
G Has2 hyaluronan synthase 2 IMP RGD PMID:12186949 RGD:9588629 NCBI chr 7:88,113,326...88,139,337
Ensembl chr 7:88,113,326...88,128,933
JBrowse link
G Hpse heparanase involved_in ISO (PMID:12773484) RGD PMID:12773484 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Ilk integrin-linked kinase involved_in ISO UniProtKB:Q96AC1 (PMID:30254023) RGD PMID:30254023 NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2175913 (MGI:5462513|PMID:22984613)
GO_REF:0000107
RGD
Ensembl
PMID:22984613 GO_REF:0000107 MGI:5462513 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Lims1 LIM zinc finger domain containing 1 involved_in IBA
ISO
PMID:21873635
(PMID:20926685)
RGD PMID:20926685 PMID:21873635 RGD:13792537 NCBI chr20:26,309,833...26,418,511
Ensembl chr20:26,309,895...26,418,500
JBrowse link
G Lims2 LIM zinc finger domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:23,553,813...23,592,137
Ensembl chr18:23,553,937...23,592,137
JBrowse link
G Mdk midkine involved_in ISS
ISO
GO_REF:0000024
(MGI:3695948|PMID:16901907)
UniProt
RGD
PMID:16901907 GO_REF:0000024 MGI:3695948 NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
G Myadm myeloid-associated differentiation marker involved_in ISO
IEA
(PMID:21325632)
GO_REF:0000107
RGD
Ensembl
PMID:21325632 GO_REF:0000107 NCBI chr 1:65,864,180...65,874,701
Ensembl chr 1:65,864,173...65,874,035
JBrowse link
G Myoc myocilin involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:18855004)
UniProt
Ensembl
RGD
PMID:18855004 GO_REF:0000024 GO_REF:0000107 NCBI chr13:74,976,730...74,987,128
Ensembl chr13:74,976,730...74,987,127
JBrowse link
G Nedd9 neural precursor cell expressed, developmentally down-regulated 9 involved_in ISO (PMID:18256281) RGD PMID:18256281 NCBI chr17:23,289,793...23,468,026
Ensembl chr17:23,282,326...23,468,019
JBrowse link
G Net1 neuroepithelial cell transforming 1 acts_upstream_of_or_within ISO (MGI:5471195|PMID:23184663) RGD PMID:23184663 MGI:5471195 NCBI chr17:66,341,251...66,370,445
Ensembl chr17:66,340,728...66,370,441
JBrowse link
G Nrp1 neuropilin 1 involved_in ISO (PMID:24863063) RGD PMID:24863063 NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
JBrowse link
G Olfm4 olfactomedin 4 involved_in ISO (PMID:16566923) RGD PMID:16566923 NCBI chr15:55,385,100...55,429,687
Ensembl chr15:55,407,148...55,429,681
JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta involved_in ISO (PMID:24415753) RGD PMID:24415753 NCBI chr10:105,836,972...105,848,583
Ensembl chr10:105,836,982...105,848,500
JBrowse link
G Prex1 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 acts_upstream_of_or_within ISO MGI:98923 (MGI:4939305|PMID:21178006) RGD PMID:21178006 MGI:4939305 NCBI chr 3:155,306,950...155,456,688
Ensembl chr 3:155,306,950...155,456,688
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO
IEA
(PMID:23129259)
GO_REF:0000107
RGD
Ensembl
PMID:23129259 GO_REF:0000107 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rac3 Rac family small GTPase 3 involved_in ISO (PMID:11756406) RGD PMID:11756406 NCBI chr10:106,002,808...106,005,244
Ensembl chr10:105,993,087...106,005,260
JBrowse link
G Rreb1 ras responsive element binding protein 1 involved_in ISO (PMID:18394891) RGD PMID:18394891 NCBI chr17:26,876,686...27,002,615
Ensembl chr17:26,876,697...27,002,615
JBrowse link
G S100a10 S100 calcium binding protein A10 involved_in ISO (PMID:23129259) RGD PMID:23129259 NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:179,220,887...179,229,661
JBrowse link
G Tesk1 testis associated actin remodelling kinase 1 involved_in ISO
ISS
(PMID:15584898)
GO_REF:0000024
RGD
UniProt
PMID:15584898 GO_REF:0000024 NCBI chr 5:57,691,922...57,697,698
Ensembl chr 5:57,691,969...57,697,698
JBrowse link
G Triobp TRIO and F-actin binding protein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:11148140)
(MGI:3687791|PMID:11148140)
RGD PMID:11148140 PMID:21873635 MGI:3687791, RGD:13792537 NCBI chr 7:110,505,916...110,569,301
Ensembl chr 7:110,506,248...110,562,474
JBrowse link
G Unc13d unc-13 homolog D involved_in IEA
ISO
GO_REF:0000107
(MGI:5444087|PMID:22589474)
Ensembl
RGD
PMID:22589474 GO_REF:0000107 MGI:5444087 NCBI chr10:101,296,755...101,311,513
Ensembl chr10:101,296,776...101,311,687
JBrowse link
positive regulation of substrate-dependent cell migration, cell attachment to substrate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbln1 fibulin 1 involved_in ISO (PMID:25834989) RGD PMID:25834989 NCBI chr 7:116,310,582...116,390,075
Ensembl chr 7:116,310,582...116,390,075
JBrowse link
G Fn1 fibronectin 1 involved_in ISO
IEA
(PMID:25834989)
GO_REF:0000107
RGD
Ensembl
PMID:25834989 GO_REF:0000107 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Stk4 serine/threonine kinase 4 involved_in ISO (MGI:3821942|PMID:19073936) RGD PMID:19073936 MGI:3821942 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20091
    cellular process 18676
      cell adhesion 1462
        cell-substrate adhesion 389
          positive regulation of cell-substrate adhesion 149
            positive regulation of cell adhesion involved in single-species biofilm formation 0
            positive regulation of cell-matrix adhesion + 71
            positive regulation of substrate adhesion-dependent cell spreading 45
            positive regulation of substrate-dependent cell migration, cell attachment to substrate 3
Path 2
Term Annotations click to browse term
  biological_process 20091
    biological regulation 13996
      regulation of biological process 13218
        positive regulation of biological process 6796
          positive regulation of cellular process 6122
            positive regulation of cell adhesion 508
              positive regulation of cell-substrate adhesion 149
                positive regulation of cell adhesion involved in single-species biofilm formation 0
                positive regulation of cell-matrix adhesion + 71
                positive regulation of substrate adhesion-dependent cell spreading 45
                positive regulation of substrate-dependent cell migration, cell attachment to substrate 3
paths to the root