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ONTOLOGY REPORT - ANNOTATIONS

Term:DNA double-strand break processing involved in repair via single-strand annealing
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Accession:GO:0010792 term browser browse the term
Definition:The 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang that results in the repair of a double strand break via single-strand annealing.


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DNA double-strand break processing involved in repair via single-strand annealing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07031480.1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033
G ENSRNOG00000066166 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr13:62,124,375...62,124,887 JBrowse link
G ENSRNOG00000069305 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 Ensembl chr13:18,979,537...18,979,779 JBrowse link
G Helq helicase, POLQ-like involved_in ISO (PMID:34937945) RGD PMID:34937945 NCBI chr14:8,818,582...8,862,926
Ensembl chr14:8,818,592...8,862,960 		JBrowse link
G Rad52 RAD52 homolog, DNA repair protein involved_in
acts_upstream_of_or_within		 ISO (MGI:5619739|PMID:22912580)
(PMID:19506022)		 RGD PMID:19506022 PMID:22912580 MGI:5619739 NCBI chr 4:153,106,062...153,128,598
Ensembl chr 4:153,106,062...153,128,207 		JBrowse link
G Rbbp8 RB binding protein 8, endonuclease involved_in ISO
IBA
IEA		 (PMID:18716619), (PMID:19202191)
GO_REF:0000033
GO_REF:0000118		 RGD
GO_Central
TreeGrafter		 PMID:18716619 PMID:19202191 GO_REF:0000033 GO_REF:0000118 NCBI chr18:2,922,985...2,988,851
Ensembl chr18:2,921,286...2,988,846 		JBrowse link
G Rbbp8nl RBBP8 N-terminal like involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 3:167,364,048...167,378,993
Ensembl chr 3:167,364,048...167,379,092 		JBrowse link
G Rnf138 ring finger protein 138 involved_in ISO
ISS
IBA
IEA		 (PMID:26502057)
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118		 RGD
UniProt
GO_Central
TreeGrafter		 PMID:26502057 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr18:12,291,557...12,315,931
Ensembl chr18:12,291,590...12,315,930 		JBrowse link
G Rnf138l1 ring finger protein 138 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:30,739,541...30,740,614
Ensembl chr  X:30,739,413...30,740,613 		JBrowse link
G Slx1b SLX1 homolog B, structure-specific endonuclease subunit involved_in ISO (PMID:19595721) RGD PMID:19595721 NCBI chr 1:181,286,190...181,291,739
Ensembl chr 1:181,283,921...181,291,775 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:19595721) RGD PMID:19595721 NCBI chr10:11,526,623...11,549,313
Ensembl chr10:11,528,424...11,549,295 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    metabolic process 11835
      organic substance metabolic process 11328
        macromolecule metabolic process 9578
          nucleic acid metabolic process 5144
            DNA metabolic process 991
              DNA double-strand break processing 28
                DNA double-strand break processing involved in repair via single-strand annealing 11
Path 2
Term Annotations click to browse term
  biological_process 20413
    metabolic process 11835
      organic substance metabolic process 11328
        organic cyclic compound metabolic process 6260
          nucleobase-containing compound metabolic process 5743
            nucleic acid metabolic process 5144
              DNA metabolic process 991
                DNA repair 561
                  double-strand break repair 308
                    double-strand break repair via single-strand annealing 14
                      DNA double-strand break processing involved in repair via single-strand annealing 11
paths to the root