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ONTOLOGY REPORT - ANNOTATIONS


Term:fibroblast migration
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Accession:GO:0010761 term browser browse the term
Definition:Cell migration that is accomplished by extension and retraction of a fibroblast pseudopodium. A fibroblast is a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules.
Synonyms:exact_synonym: fibroblast cell migration



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fibroblast migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5b AT-rich interaction domain 5B acts_upstream_of_or_within ISO MGI:3526852 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr20:20,307,731...20,490,746
Ensembl chr20:20,307,731...20,487,433
JBrowse link
G Ccn3 cellular communication network factor 3 involved_in ISO
ISS
(PMID:15611078)
GO_REF:0000024
RGD
UniProt
PMID:15611078 GO_REF:0000024 NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019
JBrowse link
G Ilk integrin-linked kinase acts_upstream_of_or_within ISO (MGI:5504320|PMID:23658024) RGD PMID:23658024 MGI:5504320 NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 acts_upstream_of_or_within ISO MGI:1932697 (MGI:5609900|PMID:24841562) RGD PMID:24841562 MGI:5609900 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755
JBrowse link
G Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 acts_upstream_of_or_within ISO MGI:1352757|MGI:3701832 (MGI:5609900|PMID:24841562) RGD PMID:24841562 MGI:5609900 NCBI chr 2:174,008,556...174,011,950
Ensembl chr 2:174,008,548...174,013,013
JBrowse link
G Pdlim1 PDZ and LIM domain 1 involved_in IMP PMID:22659164 UniProt PMID:22659164 RGD:13432282 NCBI chr 1:239,042,372...239,091,074
Ensembl chr 1:239,042,385...239,091,076
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha acts_upstream_of_or_within ISO (MGI:3581335|PMID:15870270) RGD PMID:15870270 MGI:3581335 NCBI chr 2:182,628,299...182,671,584
Ensembl chr 2:182,628,300...182,671,598
JBrowse link
G Plec plectin involved_in ISO
IEA
MGI:3613062 (MGI:3612644|PMID:16344482)
GO_REF:0000107
RGD
Ensembl
PMID:16344482 GO_REF:0000107 MGI:3612644 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:5502477|PMID:23555679) RGD PMID:23555679 MGI:5502477 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (MGI:5616959|PMID:25429154) RGD PMID:25429154 MGI:5616959 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Schip1 schwannomin interacting protein 1 acts_upstream_of_or_within ISO MGI:3526869 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr 2:152,127,171...152,888,587
Ensembl chr 2:152,126,953...152,888,585
JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 acts_upstream_of_or_within ISO MGI:3526851 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr20:29,047,793...29,094,209
Ensembl chr20:29,047,796...29,094,084
JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of_or_within ISO MGI:2662475 (MGI:6219093|PMID:26585507) RGD PMID:26585507 MGI:6219093 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364
JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 acts_upstream_of_or_within ISO MGI:3811076 (MGI:3810041|PMID:18477613) RGD PMID:18477613 MGI:3810041 NCBI chr 6:94,537,088...94,848,085 JBrowse link
G Tmem201 transmembrane protein 201 acts_upstream_of_or_within ISO (MGI:5492001|PMID:22349700) RGD PMID:22349700 MGI:5492001 NCBI chr 5:160,166,240...160,188,874
Ensembl chr 5:160,166,427...160,188,843
JBrowse link
G Tns1 tensin 1 acts_upstream_of_or_within ISO MGI:2447792 (MGI:2157265|PMID:11792844) RGD PMID:11792844 MGI:2157265 NCBI chr 9:75,491,886...75,702,853
Ensembl chr 9:75,495,814...75,703,225
JBrowse link
G Zfand5 zinc finger AN1-type containing 5 acts_upstream_of_or_within ISO MGI:3526860 (MGI:3696608|PMID:17143286) RGD PMID:17143286 MGI:3696608 NCBI chr 1:218,765,735...218,776,118
Ensembl chr 1:218,766,614...218,775,843
JBrowse link
negative regulation of fibroblast migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap4 Rho GTPase activating protein 4 IMP RGD PMID:17804252 RGD:2313143 NCBI chr  X:151,636,071...151,651,528
Ensembl chr  X:151,632,454...151,651,128
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:3047520|PMID:15199148) RGD PMID:15199148 MGI:3047520 NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
JBrowse link
G Cygb cytoglobin IDA RGD PMID:14647402 RGD:9685173 NCBI chr10:101,877,675...101,887,442
Ensembl chr10:101,877,676...101,887,442
JBrowse link
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:19577615) RGD PMID:19577615 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
JBrowse link
G Has1 hyaluronan synthase 1 involved_in ISO (PMID:19577615) RGD PMID:19577615 NCBI chr 1:58,693,411...58,705,653
Ensembl chr 1:58,693,411...58,705,397
JBrowse link
G Hyal2 hyaluronidase 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:19577615)
UniProt
Ensembl
RGD
PMID:19577615 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:108,241,895...108,246,853
Ensembl chr 8:108,243,133...108,246,850
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 involved_in ISO (MGI:5486544|PMID:18227284) RGD PMID:18227284 MGI:5486544 NCBI chr 6:40,820,693...40,836,074
Ensembl chr 6:40,821,339...40,836,037
JBrowse link
G Macir macrophage immunometabolism regulator involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5698579|PMID:26316022)
RGD PMID:26316022 PMID:21873635 MGI:5698579, RGD:13792537 NCBI chr 9:98,420,760...98,440,818
Ensembl chr 9:98,420,376...98,441,733
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO
IEA
(PMID:19126672)
GO_REF:0000107
RGD
Ensembl
PMID:19126672 GO_REF:0000107 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
negative regulation of hepatic stellate cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipor2 adiponectin receptor 2 IMP RGD PMID:29237572 RGD:24922203 NCBI chr 4:152,524,604...152,588,848
Ensembl chr 4:152,524,623...152,559,355
JBrowse link
positive regulation of fibroblast migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr3 actin related protein 3 IMP RGD PMID:20566646 RGD:11530051 NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
JBrowse link
G Ager advanced glycosylation end product-specific receptor IMP RGD PMID:19959167 RGD:2325646 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (MGI:5529589|PMID:23871832) RGD PMID:23871832 MGI:5529589 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Bag4 BAG cochaperone 4 involved_in ISO (MGI:5292318|PMID:21712384) RGD PMID:21712384 MGI:5292318 NCBI chr16:66,288,678...66,305,893
Ensembl chr16:66,288,678...66,308,663
JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO (MGI:2158097|PMID:11723120) RGD PMID:11723120 MGI:2158097 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
JBrowse link
G Dmtn dematin actin binding protein involved_in ISO (MGI:3803395|PMID:18505823) RGD PMID:18505823 MGI:3803395 NCBI chr15:45,677,974...45,705,601
Ensembl chr15:45,677,977...45,705,601
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:12176960 RGD:10402085 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO
IEA
(PMID:26763945)
GO_REF:0000107
RGD
Ensembl
PMID:26763945 GO_REF:0000107 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Itgb3 integrin subunit beta 3 acts_upstream_of_or_within IMP
ISO
MGI:2175913 (MGI:5462513|PMID:22984613) RGD PMID:22984613 PMID:10869268 MGI:5462513, RGD:5024916 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
JBrowse link
G Mmp1 matrix metallopeptidase 1 IMP RGD PMID:19465549 RGD:7207389 NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 IDA RGD PMID:18931661 RGD:11533948 NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 IMP RGD PMID:23818969 RGD:10412710 NCBI chr  X:107,116,308...107,374,342
Ensembl chr  X:107,260,898...107,368,314
JBrowse link
G Prkce protein kinase C, epsilon involved_in ISS
ISO
GO_REF:0000024
(MGI:5306309|PMID:16270034)
UniProt
RGD
PMID:16270034 GO_REF:0000024 MGI:5306309 NCBI chr 6:7,965,048...8,451,966
Ensembl chr 6:7,965,048...8,451,719
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO
IEA
(PMID:26763945)
GO_REF:0000107
RGD
Ensembl
PMID:26763945 GO_REF:0000107 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Slc8a1 solute carrier family 8 member A1 IMP RGD PMID:19770194 RGD:6771237 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:18555217)
(MGI:5529589|PMID:23871832)
GO_REF:0000024
RGD
UniProt
PMID:18555217 PMID:23871832 GO_REF:0000024 MGI:5529589 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:18555217) RGD PMID:18555217 NCBI chr 3:105,056,286...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
G Tsc2 TSC complex subunit 2 IMP RGD PMID:20530489 RGD:11568685 NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
JBrowse link
G Uts2 urotensin 2 IDA RGD PMID:18475149 RGD:2306811 NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237
JBrowse link
positive regulation of hepatic stellate cell migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta2 actin alpha 2, smooth muscle IMP RGD PMID:24204762 RGD:12879446 NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554
JBrowse link
G Akap12 A-kinase anchoring protein 12 IMP RGD PMID:23925424 RGD:14348971 NCBI chr 1:40,730,123...40,819,863
Ensembl chr 1:40,730,123...40,819,886
JBrowse link
regulation of fibroblast migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in ISO (MGI:5700256|PMID:26445298) RGD PMID:26445298 MGI:5700256 NCBI chr16:2,118,503...2,166,741
Ensembl chr16:2,121,255...2,166,692
JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in ISO (MGI:5700256|PMID:26445298) RGD PMID:26445298 MGI:5700256 NCBI chr 7:20,135,248...20,184,757
Ensembl chr 7:20,135,375...20,184,754
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (PMID:20850431) RGD PMID:20850431 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Coro1c coronin 1C involved_in ISO (MGI:5621257|PMID:25074804) RGD PMID:25074804 MGI:5621257 NCBI chr12:42,712,960...42,785,179
Ensembl chr12:42,712,991...42,785,179
JBrowse link
G Fer FER tyrosine kinase involved_in IEA
ISO
GO_REF:0000107
(MGI:3723409|PMID:17606629)
Ensembl
RGD
PMID:17606629 GO_REF:0000107 MGI:3723409 NCBI chr 9:103,520,452...103,827,364
Ensembl chr 9:103,520,493...103,821,451
JBrowse link
G Gna12 G protein subunit alpha 12 involved_in ISS
ISO
GO_REF:0000024
(MGI:5448916|PMID:22609986)
UniProt
RGD
PMID:22609986 GO_REF:0000024 MGI:5448916 NCBI chr12:13,805,580...13,886,255
Ensembl chr12:13,805,698...13,886,255
JBrowse link
G Mta2 metastasis associated 1 family, member 2 IDA RGD PMID:24468085 RGD:9588228 NCBI chr 1:205,838,181...205,846,903
Ensembl chr 1:205,837,964...205,846,946
JBrowse link
G Prr5l proline rich 5 like involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5448916|PMID:22609986)
(PMID:22609986)
UniProt
Ensembl
RGD
PMID:22609986 GO_REF:0000024 GO_REF:0000107 MGI:5448916 NCBI chr 3:88,001,951...88,173,532
Ensembl chr 3:88,003,617...88,082,763
JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO (MGI:5621257|PMID:25074804) RGD PMID:25074804 MGI:5621257 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in ISO (MGI:5621257|PMID:25074804) RGD PMID:25074804 MGI:5621257 NCBI chr 5:152,994,406...153,017,223
Ensembl chr 5:152,993,665...153,017,205
JBrowse link
G Rffl ring finger and FYVE-like domain containing E3 ubiquitin protein ligase involved_in ISS
ISO
GO_REF:0000024
(MGI:5448916|PMID:22609986)
UniProt
RGD
PMID:22609986 GO_REF:0000024 MGI:5448916 NCBI chr10:67,740,711...67,803,694
Ensembl chr10:67,740,712...67,824,434
JBrowse link
G Sdc4 syndecan 4 involved_in ISO (MGI:5621257|PMID:25074804) RGD PMID:25074804 MGI:5621257 NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5558098 (MGI:5544506|PMID:24302887)
Ensembl
RGD
PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    locomotion 1984
      cell motility 1792
        cell migration 1591
          ameboidal-type cell migration 461
            fibroblast migration 60
              hepatic stellate cell migration + 3
              negative regulation of fibroblast migration + 10
              positive regulation of fibroblast migration + 21
              regulation of fibroblast migration + 43
Path 2
Term Annotations click to browse term
  biological_process 19497
    cellular process 18359
      movement of cell or subcellular component 2226
        cell motility 1792
          cell migration 1591
            ameboidal-type cell migration 461
              fibroblast migration 60
                hepatic stellate cell migration + 3
                negative regulation of fibroblast migration + 10
                positive regulation of fibroblast migration + 21
                regulation of fibroblast migration + 43
paths to the root