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ONTOLOGY REPORT - ANNOTATIONS


Term:muscle cell apoptotic process
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Accession:GO:0010657 term browser browse the term
Definition:A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.
Synonyms:narrow_synonym: muscle cell apoptosis
 only_in_taxon: NCBITaxon:33208 ! Metazoa



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muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2153356 (PMID:19519726) RGD PMID:19519726 NCBI chr20:11,905,690...11,924,111
Ensembl chr20:11,905,957...11,924,597
JBrowse link
G Dmpk DM1 protein kinase involved_in ISO (PMID:18729234) RGD PMID:18729234 NCBI chr 1:87,858,294...87,868,624
Ensembl chr 1:78,730,275...78,740,593
JBrowse link
cardiac muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apaf1 apoptotic peptidase activating factor 1 IMP RGD PMID:18197610 RGD:2325741 NCBI chr 7:27,381,392...27,466,772
Ensembl chr 7:25,494,609...25,579,540
JBrowse link
G Atg5 autophagy related 5 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:3050453|MGI:3663625 (PMID:17450150)
Ensembl
RGD
PMID:17450150 GO_REF:0000107 NCBI chr20:49,380,835...49,471,826
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of ISO (PMID:17450150) RGD PMID:17450150 NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Bnip3 BCL2 interacting protein 3 IMP RGD PMID:12226479 RGD:632019 NCBI chr 1:203,137,778...203,154,962
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Dynlt1 dynein light chain Tctex-type 1 IMP RGD PMID:22164227 RGD:13208528 NCBI chr 1:49,292,093...49,299,051
Ensembl chr 1:46,887,017...46,893,881
JBrowse link
G Gnb1 G protein subunit beta 1 acts_upstream_of_or_within IDA PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 5:171,357,778...171,424,489
Ensembl chr 5:166,075,629...166,142,124
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 acts_upstream_of_or_within IDA PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 4:32,006,267...32,009,252
Ensembl chr 4:32,006,267...32,009,252
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of ISO MGI:2447620 (PMID:20382855) RGD PMID:20382855 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IEP RGD PMID:21620734 RGD:5686387 NCBI chr 6:135,523,604...135,529,687
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Kifap3 kinesin-associated protein 3 acts_upstream_of ISO MGI:3613572 (PMID:10793158) RGD PMID:10793158 NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650
JBrowse link
G Mir208a microRNA 208a IMP RGD PMID:26861724 RGD:242905213 NCBI chr15:32,395,552...32,395,634 JBrowse link
G Myocd myocardin involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:3773717 (PMID:19850880)
Ensembl
RGD
PMID:19850880 GO_REF:0000107 NCBI chr10:50,332,356...50,426,819
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO
IEA
(PMID:16505176)
GO_REF:0000107
RGD
Ensembl
PMID:16505176 GO_REF:0000107 NCBI chr19:50,066,493...50,068,175
Ensembl chr19:33,154,062...33,158,250
JBrowse link
G Nrg1 neuregulin 1 IEP RGD PMID:32828943 RGD:405650202 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Rps6ka2 ribosomal protein S6 kinase A2 acts_upstream_of_or_within ISO (PMID:16585392) RGD PMID:16585392 NCBI chr 1:55,178,988...55,454,271
Ensembl chr 1:52,631,736...52,906,739
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of ISO (PMID:17251350) RGD PMID:17251350 NCBI chr 2:171,387,536...171,395,081
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Sirt1 sirtuin 1 IMP RGD PMID:16207712 RGD:9495935 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of ISO MGI:5319187 (PMID:22044588) RGD PMID:22044588 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:159,927,139...159,946,029
Ensembl chr 6:159,927,139...159,946,029
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
MGI:1857263 (PMID:22044588)
Ensembl
RGD
PMID:22044588 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
JBrowse link
negative regulation of cardiac muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot1 acyl-CoA thioesterase 1 IMP RGD PMID:23226270 RGD:13831128 NCBI chr 6:103,636,173...103,644,167
Ensembl chr 6:103,636,041...103,644,163
JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 IMP RGD PMID:25117440 RGD:11552604 NCBI chr 3:98,156,626...98,345,876
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Atg5 autophagy related 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3050453|MGI:3663625 (PMID:17450150)
Ensembl
RGD
PMID:17450150 GO_REF:0000107 NCBI chr20:49,380,835...49,471,826
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within IMP
ISO
(PMID:17450150) RGD PMID:17450150 PMID:30144448 RGD:407571674 NCBI chr 4:149,390,000...149,597,534
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in IMP PMID:26692938 BHF-UCL PMID:26692938 RGD:12911011 NCBI chr13:23,204,464...23,366,900
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:14596792 RGD:11341703 NCBI chr 9:67,679,502...67,747,226
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO RNAcentral:URS000006FDD4_10090 (PMID:25590961) RGD PMID:25590961 NCBI chr15:41,635,572...41,707,252
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Gch1 GTP cyclohydrolase 1 IMP RGD PMID:30690003 RGD:401717569 NCBI chr15:22,884,006...22,917,412
Ensembl chr15:20,402,527...20,437,698
JBrowse link
G Ghrh growth hormone releasing hormone IMP RGD PMID:20133784 PMID:19293247 RGD:2325186, RGD:2325187 NCBI chr 3:166,412,763...166,432,519
Ensembl chr 3:145,992,763...146,011,889
JBrowse link
G H19 H19 imprinted maternally expressed transcript IMP RGD PMID:27796346 PMID:31975412 RGD:156430325, RGD:156430334 NCBI chr 1:207,160,175...207,162,851
Ensembl chr 1:197,730,698...197,733,134
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in ISO
IEA
(PMID:19008477)
GO_REF:0000107
RGD
Ensembl
PMID:19008477 GO_REF:0000107 NCBI chr16:37,928,145...37,931,488
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:2447620 (PMID:20382855) RGD PMID:20382855 NCBI chr 1:28,641,100...28,651,187
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Hsf1 heat shock transcription factor 1 IMP RGD PMID:22426029 RGD:10402789 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IMP RGD PMID:21958194 RGD:10059326 NCBI chr 8:50,080,514...50,084,376
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Hspb6 heat shock protein family B (small) member 6 involved_in IDA PMID:15105294 UniProt PMID:15105294 RGD:12050134 NCBI chr 1:85,806,898...85,809,072
Ensembl chr 1:85,806,146...85,809,071
JBrowse link
G Ilk integrin-linked kinase IMP RGD PMID:16170337 RGD:2302069 NCBI chr 1:169,500,716...169,506,972
Ensembl chr 1:160,088,897...160,095,140
JBrowse link
G Jak2 Janus kinase 2 IMP RGD PMID:23796350 RGD:8694332 NCBI chr 1:236,408,905...236,468,769
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Kifap3 kinesin-associated protein 3 acts_upstream_of_or_within ISO MGI:3613572 (PMID:10793158) RGD PMID:10793158 NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650
JBrowse link
G Mdk midkine involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:17015789), (PMID:19060126)
(PMID:19060126)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17015789 PMID:19060126 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:98,356,789...98,358,960
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
G Mfn2 mitofusin 2 IMP RGD PMID:28483668 RGD:12910717 NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mir145 microRNA 145 involved_in ISO (PMID:23028672) RGD PMID:23028672 NCBI chr18:57,369,983...57,370,070
Ensembl chr18:55,099,640...55,099,727
JBrowse link
G Mir21 microRNA 21 IMP RGD PMID:19336275 RGD:41404719 NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir210 microRNA 210 IMP RGD PMID:28661226 RGD:155260328 NCBI chr 1:205,755,923...205,756,032
Ensembl chr 1:196,326,337...196,326,454
JBrowse link
G Mir222 microRNA 222 IMP RGD PMID:25863248 RGD:152025190 NCBI chr  X:6,022,621...6,022,723
Ensembl chr  X:3,428,904...3,429,006
JBrowse link
G Mir223 microRNA 223 IDA RGD PMID:29608885 RGD:21408565 NCBI chr  X:65,151,383...65,151,492
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mir30e microRNA 30e IMP RGD PMID:27633839 RGD:401827149 NCBI chr 5:139,637,450...139,637,541
Ensembl chr 5:134,352,232...134,352,323
JBrowse link
G Mir494 microRNA 494 IDA RGD PMID:30783439 RGD:150527846 NCBI chr 6:134,550,115...134,550,197
Ensembl chr 6:128,728,709...128,728,793
JBrowse link
G Mrtfa myocardin related transcription factor A IMP RGD PMID:26854861 RGD:596933103 NCBI chr 7:114,424,481...114,594,594
Ensembl chr 7:112,544,312...112,714,418
JBrowse link
G Myocd myocardin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3773717 (PMID:19850880)
Ensembl
RGD
PMID:19850880 GO_REF:0000107 NCBI chr10:50,332,356...50,426,819
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 IMP RGD PMID:23453443 RGD:10412713 NCBI chr 3:81,001,529...81,031,165
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:11889119)
Ensembl
RGD
PMID:11889119 GO_REF:0000107 NCBI chr10:16,844,888...16,851,458
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Nol3 nucleolar protein 3 involved_in IEA
ISO
GO_REF:0000107
(PMID:16505176)
Ensembl
RGD
PMID:16505176 GO_REF:0000107 NCBI chr19:50,066,493...50,068,175
Ensembl chr19:33,154,062...33,158,250
JBrowse link
G Notch1 notch receptor 1 IMP RGD PMID:32828943 RGD:405650202 NCBI chr 3:29,676,040...29,721,613
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Npm1 nucleophosmin 1 IMP RGD PMID:21444791 RGD:11535018 NCBI chr10:18,245,739...18,255,913
Ensembl chr10:17,739,941...17,751,645
Ensembl chr  X:17,739,941...17,751,645
JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:9553078) RGD PMID:9553078 NCBI chr16:65,954,084...67,007,484
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in IMP
ISO
ISS
PMID:20181828
(PMID:20181828)
GO_REF:0000024
RGD
UniProt
PMID:20181828 PMID:20181828 GO_REF:0000024, RGD:14390062 NCBI chr 1:190,643,866...190,645,901
Ensembl chr 1:181,213,368...181,215,281
JBrowse link
G Pax8 paired box 8 involved_in ISO (PMID:22453009) RGD PMID:22453009 NCBI chr 3:27,584,000...27,641,094
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IMP RGD PMID:23647599 RGD:10448278 NCBI chr 1:2,111,756...2,160,354
Ensembl chr 1:2,111,763...2,159,201
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase-1 involved_in IEA
ISO
GO_REF:0000107
(PMID:19429709)
Ensembl
RGD
PMID:19429709 GO_REF:0000107 NCBI chr10:13,610,000...13,687,226
Ensembl chr10:13,105,498...13,174,623
JBrowse link
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 involved_in ISO (PMID:23426265) RGD PMID:23426265 NCBI chr20:2,827,802...2,842,418
Ensembl chr20:2,822,995...2,837,611
JBrowse link
G Qki QKI, KH domain containing RNA binding IMP RGD PMID:22178871 RGD:10045994 NCBI chr 1:52,935,357...53,047,338
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Ralgdsl2 ral guanine nucleotide dissociation stimulator like 2 acts_upstream_of_or_within ISO (PMID:24069211) RGD PMID:24069211 NCBI chr20:4,948,495...4,956,774
Ensembl chr20:4,948,497...4,969,911
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IMP RGD PMID:18276108 RGD:9835371 NCBI chr 7:130,754,883...130,777,303
Ensembl chr 7:128,875,773...128,898,521
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO (PMID:17251350) RGD PMID:17251350 NCBI chr 2:171,387,536...171,395,081
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Sirt1 sirtuin 1 IMP RGD PMID:20089851 RGD:2316169 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sirt4 sirtuin 4 IMP RGD PMID:24029877 RGD:9586053 NCBI chr12:46,785,852...46,800,179
Ensembl chr12:41,131,262...41,139,439
JBrowse link
G Sirt5 sirtuin 5 IMP RGD PMID:24192575 RGD:9586058 NCBI chr17:21,310,028...21,337,137
Ensembl chr17:21,310,028...21,337,101
JBrowse link
G Slc25a4 solute carrier family 25 member 4 IDA RGD PMID:22564366 RGD:9681467 NCBI chr16:52,805,521...52,809,316
Ensembl chr16:46,072,939...46,076,733
JBrowse link
G Trip10 thyroid hormone receptor interactor 10 IMP RGD PMID:23915320 RGD:11535145 NCBI chr 9:2,219,695...2,234,771
Ensembl chr 9:2,133,671...2,147,799
JBrowse link
negative regulation of muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1 adenylate cyclase activating polypeptide 1 IDA RGD PMID:16891268 RGD:2325292 NCBI chr 9:120,550,236...120,569,096
Ensembl chr 9:113,103,718...113,109,773
JBrowse link
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISS
ISO
GO_REF:0000024
(PMID:23578768)
UniProt
RGD
PMID:23578768 GO_REF:0000024 NCBI chr10:55,456,923...55,469,239
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G Cav1 caveolin 1 IMP RGD PMID:18039791 RGD:2289114 NCBI chr 4:46,606,538...46,639,616
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 IMP RGD PMID:14654373 RGD:2289997 NCBI chr 9:76,973,386...78,045,633
Ensembl chr 9:69,531,481...70,596,595
JBrowse link
G Hmox1 heme oxygenase 1 IDA RGD PMID:12396617 RGD:728858 NCBI chr19:13,452,365...13,479,823
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Igf1 insulin-like growth factor 1 IMP RGD PMID:16699953 RGD:12904920 NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Igf1r insulin-like growth factor 1 receptor IMP RGD PMID:19507001 RGD:2311507 NCBI chr 1:130,959,787...131,248,664
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Lifr LIF receptor subunit alpha IMP RGD PMID:15927854 RGD:1581857 NCBI chr 2:57,951,787...58,020,357
Ensembl chr 2:56,250,120...56,286,699
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 IMP RGD PMID:15089039 RGD:1625255 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:32,882,032...32,963,631
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:12668584 RGD:1642633 NCBI chr15:44,536,275...44,656,754
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Smad1 SMAD family member 1 IEP RGD PMID:11408477 RGD:1643239 NCBI chr19:45,417,430...45,477,962
Ensembl chr19:28,513,131...28,573,651
JBrowse link
G Tbx1 T-box transcription factor 1 IMP RGD PMID:31982878 RGD:155882591 NCBI chr11:95,913,610...95,923,392
Ensembl chr11:82,409,275...82,418,380
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO
GO_REF:0000024
(PMID:21616078)
UniProt
RGD
PMID:21616078 GO_REF:0000024 NCBI chr 5:142,661,193...142,670,051
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
negative regulation of smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1a angiotensin II receptor, type 1a acts_upstream_of_or_within ISO (PMID:19508861) RGD PMID:19508861 NCBI chr17:34,383,397...34,435,523
Ensembl chr17:34,174,429...34,226,946
JBrowse link
G Apoh apolipoprotein H involved_in ISO
IEA
(PMID:15534879)
GO_REF:0000107
RGD
Ensembl
PMID:15534879 GO_REF:0000107 NCBI chr10:93,841,992...93,855,897
Ensembl chr10:93,310,977...93,356,329
JBrowse link
G Arrb2 arrestin, beta 2 IMP RGD PMID:19171933 RGD:5510006 NCBI chr10:55,645,539...55,653,485
Ensembl chr10:55,146,818...55,154,850
JBrowse link
G Dipk2a divergent protein kinase domain 2A involved_in
acts_upstream_of_or_within
ISO (PMID:24269490) RGD PMID:24269490 NCBI chr 8:103,950,345...103,969,461
Ensembl chr 8:95,030,279...95,089,815
JBrowse link
G Edn1 endothelin 1 IDA RGD PMID:16857764 RGD:4892596 NCBI chr17:22,660,799...22,666,687
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Esr1 estrogen receptor 1 involved_in IMP PMID:21808025 UniProt PMID:21808025 RGD:13432273 NCBI chr 1:43,511,685...43,904,454
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Gria4 glutamate ionotropic receptor AMPA type subunit 4 involved_in IEA
ISO
GO_REF:0000107
RNAcentral:URS00003E47B1_9606 (PMID:32151690)
Ensembl
RGD
PMID:32151690 GO_REF:0000107 NCBI chr 8:1,562,118...2,035,035
Ensembl chr 8:1,562,119...2,034,979
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:21557011 RGD:10045551 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IMP
(PMID:16942485)
PMID:20724525
RGD PMID:16942485 PMID:20724525 RGD:401901210 NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in ISO (PMID:15271658) RGD PMID:15271658 NCBI chr 4:168,997,937...169,131,716
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Lypd3 Ly6/Plaur domain containing 3 involved_in ISO RNAcentral:URS00003E47B1_9606 (PMID:32151690) RGD PMID:32151690 NCBI chr 1:80,226,449...80,230,901
Ensembl chr 1:80,226,449...80,230,901
JBrowse link
G Map2k5 mitogen activated protein kinase kinase 5 involved_in IMP PMID:20724525 UniProt PMID:20724525 RGD:401901210 NCBI chr 8:63,625,220...63,852,090
Ensembl chr 8:63,625,221...63,851,983
JBrowse link
G Mapk7 mitogen-activated protein kinase 7 involved_in IMP PMID:20724525 UniProt PMID:20724525 RGD:401901210 NCBI chr10:46,669,721...46,675,768
Ensembl chr10:46,170,167...46,176,267
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (PMID:19153266) RGD PMID:19153266 NCBI chr 5:67,157,141...67,198,287
Ensembl chr 5:62,361,822...62,402,733
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region IMP RGD PMID:15247148 RGD:2306423 NCBI chr14:61,551,366...61,736,220
Ensembl chr14:57,338,507...57,523,353
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISS
ISO
IMP
GO_REF:0000024
(PMID:20724525)
PMID:19483080
UniProt
RGD
PMID:20724525 PMID:19483080 GO_REF:0000024, RGD:401901209 NCBI chr10:15,355,278...15,357,559
Ensembl chr10:14,850,765...14,853,046
JBrowse link
negative regulation of striated muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag3 BAG cochaperone 3 involved_in
acts_upstream_of_or_within
ISO (PMID:19085932)
MGI:3530294 (PMID:16936253)
RGD PMID:16936253 PMID:19085932 NCBI chr 1:192,533,460...192,557,281
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IMP RGD PMID:19505369 RGD:5508691 NCBI chr 2:29,732,163...29,754,276
Ensembl chr 2:27,997,525...28,019,703
JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO (PMID:24312627) RGD PMID:24312627 NCBI chr19:50,066,493...50,068,175
Ensembl chr19:33,154,062...33,158,250
JBrowse link
negative regulation of vascular associated smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator IMP RGD PMID:24999019 RGD:11567225 NCBI chr 4:47,422,084...47,694,646
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in ISO
IEA
(PMID:27021683)
GO_REF:0000107
RGD
Ensembl
PMID:27021683 GO_REF:0000107 NCBI chr 8:27,716,797...27,763,405
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase IMP RGD PMID:28404743 RGD:13792653 NCBI chr 4:159,648,592...159,653,436
Ensembl chr 4:157,962,343...157,966,235
JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA
(PMID:26166810)
GO_REF:0000107
RGD
Ensembl
PMID:26166810 GO_REF:0000107 NCBI chr 7:24,169,608...24,249,446
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Mir17 microRNA 17 involved_in ISO (PMID:27640178) RGD PMID:27640178 NCBI chr15:98,587,848...98,587,931
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir21 microRNA 21 involved_in ISO (PMID:28522568) RGD PMID:28522568 NCBI chr10:71,902,600...71,902,691
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir210 microRNA 210 involved_in ISO (PMID:22886504) RGD PMID:22886504 NCBI chr 1:205,755,923...205,756,032
Ensembl chr 1:196,326,337...196,326,454
JBrowse link
G Slc7a5 solute carrier family 7 member 5 IDA RGD PMID:29687865 RGD:151357004 NCBI chr19:66,843,808...66,872,412
Ensembl chr19:49,935,220...49,963,823
JBrowse link
positive regulation of cardiac muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 IMP RGD PMID:22106416 RGD:329337361 NCBI chr13:80,280,595...80,366,939
Ensembl chr13:77,768,468...77,833,951
JBrowse link
G Agt angiotensinogen IDA RGD PMID:24465706 RGD:11039412 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:31819041)
Ensembl
RGD
PMID:31819041 GO_REF:0000107 NCBI chr12:39,733,519...39,782,942
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in IDA PMID:23028672 BHF-UCL PMID:23028672 RGD:10047368 NCBI chr 1:203,137,778...203,154,962
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:23051746)
ParkinsonsUK-UCL
RGD
PMID:23051746 GO_REF:0000024 NCBI chr18:56,648,779...56,711,505
Ensembl chr18:54,378,784...54,438,994
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IMP PMID:23702479 BHF-UCL PMID:23702479 RGD:10047251 NCBI chr 2:217,698,324...217,961,898
Ensembl chr 2:215,024,004...215,286,178
JBrowse link
G Capn1 calpain 1 IMP RGD PMID:22402252 RGD:13792584 NCBI chr 1:212,705,219...212,736,134
Ensembl chr 1:203,277,344...203,300,177
JBrowse link
G Capn2 calpain 2 IMP RGD PMID:21268078 RGD:13792651 NCBI chr13:96,681,902...96,732,625
Ensembl chr13:94,150,240...94,200,969
JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 IMP RGD PMID:22562555 RGD:7257691 NCBI chr 9:83,178,645...83,185,017
Ensembl chr 9:75,729,115...75,739,425
JBrowse link
G Eif5a eukaryotic translation initiation factor 5A IMP RGD PMID:20930373 RGD:10395362 NCBI chr10:55,138,821...55,143,272
Ensembl chr10:54,640,024...54,644,656
JBrowse link
G Fbxo32 F-box protein 32 involved_in IGI PMID:24117217 BHF-UCL PMID:24117217 PMID:24117217 RGD:11079185, RGD:11079185 NCBI chr 7:91,620,925...91,654,491
Ensembl chr 7:89,730,232...89,765,436
JBrowse link
G Fndc1 fibronectin type III domain containing 1 acts_upstream_of_or_within IMP PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 1:47,281,839...47,364,247
Ensembl chr 1:47,281,844...47,364,259
JBrowse link
G Gata6 GATA binding protein 6 involved_in IMP PMID:25950484 BHF-UCL PMID:25950484 RGD:11541106 NCBI chr18:2,460,909...2,492,322
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G H19 H19 imprinted maternally expressed transcript IMP RGD PMID:28430627 RGD:156430329 NCBI chr 1:207,160,175...207,162,851
Ensembl chr 1:197,730,698...197,733,134
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IMP RGD PMID:19298698 RGD:5508693 NCBI chr 2:29,732,163...29,754,276
Ensembl chr 2:27,997,525...28,019,703
JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 IMP RGD PMID:15055478 RGD:10402811 NCBI chr14:86,270,208...86,277,944
Ensembl chr14:82,056,347...82,064,083
JBrowse link
G Ltk leukocyte receptor tyrosine kinase involved_in ISO (PMID:10445845) RGD PMID:10445845 NCBI chr 3:106,734,675...106,741,552
Ensembl chr 3:106,734,676...106,743,369
JBrowse link
G Map3k5 mitogen-activated protein kinase kinase kinase 5 IMP RGD PMID:22635076 RGD:10412335 NCBI chr 1:16,505,387...16,723,899
Ensembl chr 1:14,685,492...14,904,800
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 IMP RGD PMID:11259632 RGD:10412677 NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mff mitochondrial fission factor IMP RGD PMID:23867156 RGD:12879458 NCBI chr 9:91,455,931...91,484,171
Ensembl chr 9:84,007,798...84,036,039
JBrowse link
G Mir320a microRNA 320a IMP RGD PMID:19380620 PMID:30181740 PMID:30840298 RGD:155882541, RGD:155882545, RGD:155882546 NCBI chr15:51,926,088...51,926,169
Ensembl chr15:45,516,392...45,516,473
JBrowse link
G Mir34a microRNA 34a involved_in ISO (PMID:23426265) RGD PMID:23426265 NCBI chr 5:165,815,952...165,816,053
Ensembl chr 5:160,533,002...160,533,103
JBrowse link
G Pou4f2 POU class 4 homeobox 2 involved_in IMP PMID:25356872 BHF-UCL PMID:25356872 RGD:13792547 NCBI chr19:46,390,958...46,394,599
Ensembl chr19:29,486,686...29,490,327
JBrowse link
G Pten phosphatase and tensin homolog IMP RGD PMID:22609523 PMID:30783439 RGD:12801498, RGD:150527846 NCBI chr 1:240,043,707...240,110,330
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 IMP RGD PMID:18278556 PMID:31725080 RGD:401965430, RGD:401965406 NCBI chr 3:177,056,588...177,106,424
Ensembl chr 3:156,638,769...156,687,504
JBrowse link
G Smad4 SMAD family member 4 IMP RGD PMID:15949472 RGD:12903280 NCBI chr18:69,518,988...69,549,684
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:5319187 (PMID:22044588) RGD PMID:22044588 NCBI chr 4:161,613,306...161,632,248
Ensembl chr 4:159,927,139...159,946,029
Ensembl chr 6:159,927,139...159,946,029
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857263 (PMID:22044588)
Ensembl
RGD
PMID:22044588 GO_REF:0000107 NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 IMP RGD PMID:33495812 RGD:127229929 NCBI chr 9:20,259,227...20,276,879
Ensembl chr 9:12,763,819...12,779,203
JBrowse link
positive regulation of muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grk2 G protein-coupled receptor kinase 2 IMP RGD PMID:26631573 RGD:11554709 NCBI chr 1:211,010,259...211,031,013
Ensembl chr 1:201,581,480...201,601,582
JBrowse link
positive regulation of smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag1 BAG cochaperone 1 involved_in IMP PMID:21808025 UniProt PMID:21808025 RGD:13432273 NCBI chr 5:60,864,476...60,877,059
Ensembl chr 5:56,068,494...56,081,075
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO UniProtKB:P08226 (PMID:20381282) RGD PMID:20381282 NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Foxo1 forkhead box O1 involved_in IMP PMID:19483080 UniProt PMID:19483080 RGD:401901209 NCBI chr 2:138,462,974...138,541,420
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:16942485) RGD PMID:16942485 NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Il12a interleukin 12A involved_in ISO
IEA
(PMID:16942485)
GO_REF:0000107
RGD
Ensembl
PMID:16942485 GO_REF:0000107 NCBI chr 2:155,275,734...155,282,997
Ensembl chr 2:152,965,769...152,972,734
JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:16942485) RGD PMID:16942485 NCBI chr10:29,390,300...29,405,194
Ensembl chr10:28,893,008...28,902,903
JBrowse link
G Mir28 microRNA 28 acts_upstream_of ISO (PMID:32151690) RGD PMID:32151690 NCBI chr11:75,975,523...75,975,608
Ensembl chr11:75,975,523...75,975,608
JBrowse link
G Pdcd4 programmed cell death 4 IMP RGD PMID:20357187 RGD:9589087 NCBI chr 1:262,912,659...262,949,581
Ensembl chr 1:252,921,392...252,944,275
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IMP PMID:21808025 UniProt PMID:21808025 RGD:13432273 NCBI chr10:15,355,278...15,357,559
Ensembl chr10:14,850,765...14,853,046
JBrowse link
positive regulation of striated muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp12 caspase 12 IMP RGD PMID:26801321 RGD:11571826 NCBI chr 8:10,927,188...10,954,442
Ensembl chr 8:2,642,434...2,674,037
JBrowse link
G Tlr2 toll-like receptor 2 IMP RGD PMID:30877771 RGD:597538506 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
positive regulation of vascular associated smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 IDA MMO:0000679 RGD PMID:23729662 RGD:329403056 NCBI chr13:80,280,595...80,366,939
Ensembl chr13:77,768,468...77,833,951
JBrowse link
G Atf4 activating transcription factor 4 acts_upstream_of_or_within ISO MGI:2180373|MGI:3819270|MGI:5550363|MGI:5812282 (PMID:27812542) RGD PMID:27812542 NCBI chr 7:113,684,681...113,686,739
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G E2f3 E2F transcription factor 3 involved_in ISO (PMID:22886504) RGD PMID:22886504 NCBI chr17:34,810,355...34,887,725
Ensembl chr17:34,601,830...34,676,253
JBrowse link
G Grp gastrin releasing peptide IMP RGD PMID:32192106 RGD:329961569 NCBI chr18:61,658,655...61,672,037
Ensembl chr18:59,388,274...59,402,061
JBrowse link
G Mfn2 mitofusin 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:27640178)
Ensembl
RGD
PMID:27640178 GO_REF:0000107 NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mir1 microRNA 1 involved_in ISO (PMID:26166810) RGD PMID:26166810 NCBI chr18:2,160,327...2,160,413 JBrowse link
G Mir125a microRNA 125a IDA RGD PMID:29700287 RGD:26884455 NCBI chr 1:67,350,675...67,350,759
Ensembl chr 1:58,677,626...58,677,710
JBrowse link
G Mir140 microRNA 140 involved_in ISO (PMID:27021683) RGD PMID:27021683 NCBI chr19:52,375,293...52,375,391
Ensembl chr19:35,465,577...35,465,675
JBrowse link
G Mir1a-1 microRNA 1a-1 involved_in ISO (PMID:26166810) RGD PMID:26166810 NCBI chr 3:187,864,685...187,864,769
Ensembl chr 3:167,487,117...167,487,201
JBrowse link
G Mir24-2 microRNA 24-2 involved_in ISO (PMID:23774796) RGD PMID:23774796 NCBI chr19:40,859,455...40,859,562
Ensembl chr19:23,954,683...23,954,790
JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO (PMID:28522568) RGD PMID:28522568 NCBI chr 1:262,912,659...262,949,581
Ensembl chr 1:252,921,392...252,944,275
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:28522568) RGD PMID:28522568 NCBI chr 4:150,095,743...150,221,104
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:19508861)
Ensembl
RGD
PMID:19508861 GO_REF:0000107 NCBI chr  X:4,093,914...4,126,060
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Sod2 superoxide dismutase 2 involved_in ISO (PMID:27021683) RGD PMID:27021683 NCBI chr 1:50,043,323...50,050,168
Ensembl chr 1:47,636,528...47,645,189
JBrowse link
G Stk4 serine/threonine kinase 4 involved_in IMP PMID:23485012 BHF-UCL PMID:23485012 RGD:13506273 NCBI chr 3:173,165,238...173,247,135
Ensembl chr 3:152,745,681...152,827,744
JBrowse link
regulation of cardiac muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A NOT|involved_in ISO (PMID:15073157), (PMID:18667463) RGD PMID:15073157 PMID:18667463 NCBI chr16:9,740,751...9,786,861
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Eng endoglin NOT|involved_in ISO (PMID:17628518) RGD PMID:17628518 NCBI chr 3:36,332,190...36,370,324
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Mir210 microRNA 210 IMP RGD PMID:33234216 RGD:155260322 NCBI chr 1:205,755,923...205,756,032
Ensembl chr 1:196,326,337...196,326,454
JBrowse link
regulation of muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (PMID:22358842) RGD PMID:22358842 NCBI chr 6:129,392,298...129,457,252
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
regulation of smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde1a phosphodiesterase 1A IMP RGD PMID:16514069 RGD:2312521 NCBI chr 3:85,152,053...85,432,289
Ensembl chr 3:64,747,269...65,024,874
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO
IEA
(PMID:17098745)
GO_REF:0000107
RGD
Ensembl
PMID:17098745 GO_REF:0000107 NCBI chr20:25,305,953...25,328,000
Ensembl chr20:25,306,917...25,329,260
JBrowse link
regulation of vascular associated smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1a angiotensin II receptor, type 1a acts_upstream_of_or_within ISO MGI:2384310 (PMID:19508861) RGD PMID:19508861 NCBI chr17:34,383,397...34,435,523
Ensembl chr17:34,174,429...34,226,946
JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within ISO MGI:87964 (PMID:19508861) RGD PMID:19508861 NCBI chr  X:4,093,914...4,126,060
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2k4 mitogen activated protein kinase kinase 4 involved_in ISO (PMID:24705900) RGD PMID:24705900 NCBI chr10:50,842,348...50,947,063
Ensembl chr10:50,344,915...50,447,993
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of ISO MGI:3037444 (PMID:19153266) RGD PMID:19153266 NCBI chr 5:67,157,141...67,198,287
Ensembl chr 5:62,361,822...62,402,733
JBrowse link
striated muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag3 BAG cochaperone 3 acts_upstream_of ISO MGI:3530294 (PMID:16936253) RGD PMID:16936253 NCBI chr 1:192,533,460...192,557,281
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
vascular associated smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(PMID:19508861)
Ensembl
RGD
PMID:19508861 GO_REF:0000107 NCBI chr  X:4,093,914...4,126,060
Ensembl chr  X:1,540,398...1,572,575
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20536
    cellular process 19525
      cell death 2184
        programmed cell death 2184
          apoptotic process 2112
            muscle cell apoptotic process 148
              negative regulation of muscle cell apoptotic process + 84
              positive regulation of muscle cell apoptotic process + 54
              regulation of muscle cell apoptotic process + 138
              smooth muscle cell apoptotic process + 48
              striated muscle cell apoptotic process + 89
paths to the root