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ONTOLOGY REPORT - ANNOTATIONS


Term:muscle cell apoptotic process
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Accession:GO:0010657 term browser browse the term
Definition:A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.
Synonyms:narrow_synonym: muscle cell apoptosis
 only_in_taxon: NCBITaxon:33208 ! Metazoa



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muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmpk DM1 protein kinase involved_in ISO (PMID:18729234) RGD PMID:18729234 NCBI chr 1:78,730,255...78,740,585
Ensembl chr 1:78,730,275...78,740,593
JBrowse link
cardiac muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apaf1 apoptotic peptidase activating factor 1 IMP RGD PMID:18197610 RGD:2325741 NCBI chr 7:25,494,143...25,579,540
Ensembl chr 7:25,494,609...25,579,540
JBrowse link
G Atg5 autophagy related 5 acts_upstream_of
involved_in
ISO
IEA
MGI:3050453|MGI:3663625 (MGI:3711608|PMID:17450150)
GO_REF:0000107
RGD
Ensembl
PMID:17450150 GO_REF:0000107 MGI:3711608 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of ISO (MGI:3711608|PMID:17450150) RGD PMID:17450150 MGI:3711608 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Bnip3 BCL2 interacting protein 3 IMP RGD PMID:12226479 RGD:632019 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Gnb1 G protein subunit beta 1 acts_upstream_of_or_within IDA PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 5:166,075,508...166,142,223
Ensembl chr 5:166,075,629...166,142,124
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 acts_upstream_of_or_within IDA PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 4:32,006,267...32,009,252
Ensembl chr 4:32,006,267...32,009,252
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of ISO MGI:2447620 (MGI:4454633|PMID:20382855) RGD PMID:20382855 MGI:4454633 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IEP RGD PMID:21620734 RGD:5686387 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Kifap3 kinesin-associated protein 3 acts_upstream_of ISO MGI:3613572 (MGI:1858633|PMID:10793158) RGD PMID:10793158 MGI:1858633 NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650
JBrowse link
G Myocd myocardin acts_upstream_of
involved_in
ISO
IEA
MGI:3773717 (MGI:4397717|PMID:19850880)
GO_REF:0000107
RGD
Ensembl
PMID:19850880 GO_REF:0000107 MGI:4397717 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Nol3 nucleolar protein 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:3710289|PMID:16505176)
Ensembl
RGD
PMID:16505176 GO_REF:0000107 MGI:3710289 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
JBrowse link
G Rps6ka2 ribosomal protein S6 kinase A2 acts_upstream_of_or_within ISO (MGI:3710915|PMID:16585392) RGD PMID:16585392 MGI:3710915 NCBI chr 1:52,631,582...52,906,739
Ensembl chr 1:52,631,736...52,906,739
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of ISO (MGI:3702339|PMID:17251350) RGD PMID:17251350 MGI:3702339 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of ISO MGI:5319187 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of ISO MGI:1857263 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
negative regulation of cardiac muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot1 acyl-CoA thioesterase 1 IMP RGD PMID:23226270 RGD:13831128 NCBI chr 6:103,636,173...103,644,167
Ensembl chr 6:103,636,041...103,644,163
JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 IMP RGD PMID:25117440 RGD:11552604 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:3050453|MGI:3663625 (MGI:3711608|PMID:17450150)
GO_REF:0000107
RGD
Ensembl
PMID:17450150 GO_REF:0000107 MGI:3711608 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (MGI:3711608|PMID:17450150) RGD PMID:17450150 MGI:3711608 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in IMP PMID:26692938 BHF-UCL PMID:26692938 RGD:12911011 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator IMP RGD PMID:14596792 RGD:11341703 NCBI chr 9:60,185,338...60,236,173
Ensembl chr 9:60,185,452...60,237,034
JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO RNAcentral:URS000006FDD4_10090 (MGI:5780531|PMID:25590961) RGD PMID:25590961 MGI:5780531 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Ghrh growth hormone releasing hormone IMP RGD PMID:20133784 PMID:19293247 RGD:2325186, RGD:2325187 NCBI chr 3:145,992,762...146,012,528
Ensembl chr 3:145,992,763...146,011,889
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:4413411|PMID:19008477)
Ensembl
RGD
PMID:19008477 GO_REF:0000107 MGI:4413411 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO MGI:2447620 (MGI:4454633|PMID:20382855) RGD PMID:20382855 MGI:4454633 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Hsf1 heat shock transcription factor 1 IMP RGD PMID:22426029 RGD:10402789 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 IMP RGD PMID:21958194 RGD:10059326 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Hspb6 heat shock protein family B (small) member 6 involved_in IDA PMID:15105294 UniProt PMID:15105294 RGD:12050134 NCBI chr 1:85,806,898...85,809,072
Ensembl chr 1:85,806,146...85,809,071
JBrowse link
G Ilk integrin-linked kinase IMP RGD PMID:16170337 RGD:2302069 NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
JBrowse link
G Jak2 Janus kinase 2 IMP RGD PMID:23796350 RGD:8694332 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Kifap3 kinesin-associated protein 3 acts_upstream_of_or_within ISO MGI:3613572 (MGI:1858633|PMID:10793158) RGD PMID:10793158 MGI:1858633 NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650
JBrowse link
G Mdk midkine involved_in ISO
ISS
(PMID:19060126)
(MGI:3761216|PMID:17015789), (MGI:3837261|PMID:19060126)
GO_REF:0000024
RGD
UniProt
PMID:17015789 PMID:19060126 GO_REF:0000024 MGI:3761216 MGI:3837261 NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
G Mfn2 mitofusin 2 IMP RGD PMID:28483668 RGD:12910717 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mir145 microRNA 145 involved_in ISO (PMID:23028672) RGD PMID:23028672 NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
JBrowse link
G Mir21 microRNA 21 IMP RGD PMID:19336275 RGD:41404719 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir222 microRNA 222 IMP RGD PMID:25863248 RGD:152025190 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006
JBrowse link
G Mir223 microRNA 223 IDA RGD PMID:29608885 RGD:21408565 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Myocd myocardin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3773717 (MGI:4397717|PMID:19850880)
Ensembl
RGD
PMID:19850880 GO_REF:0000107 MGI:4397717 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 IMP RGD PMID:23453443 RGD:10412713 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:3784761|PMID:11889119)
(PMID:11889119)
Ensembl
RGD
PMID:11889119 GO_REF:0000107 MGI:3784761 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Nol3 nucleolar protein 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:3710289|PMID:16505176)
Ensembl
RGD
PMID:16505176 GO_REF:0000107 MGI:3710289 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
JBrowse link
G Npm1 nucleophosmin 1 IMP RGD PMID:21444791 RGD:11535018 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Nrg1 neuregulin 1 involved_in ISO (PMID:9553078) RGD PMID:9553078 NCBI chr16:59,250,658...60,303,024
Ensembl chr16:59,250,854...60,296,884
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
IMP
ISO
GO_REF:0000024
PMID:20181828
(PMID:20181828)
UniProt
RGD
PMID:20181828 PMID:20181828 GO_REF:0000024, RGD:14390062 NCBI chr 1:181,213,292...181,215,327 JBrowse link
G Pax8 paired box 8 involved_in ISO (MGI:5908333|PMID:22453009) RGD PMID:22453009 MGI:5908333 NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
JBrowse link
G Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 1 IMP RGD PMID:23647599 RGD:10448278 NCBI chr 1:2,111,756...2,160,354
Ensembl chr 1:2,111,763...2,159,201
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase-1 involved_in ISO (MGI:3849539|PMID:19429709) RGD PMID:19429709 MGI:3849539 NCBI chr10:13,105,435...13,182,664
Ensembl chr10:13,105,498...13,174,623
JBrowse link
G Ppp1r10 protein phosphatase 1, regulatory subunit 10 involved_in ISO (PMID:23426265) RGD PMID:23426265 NCBI chr20:2,822,995...2,838,125
Ensembl chr20:2,822,995...2,837,611
JBrowse link
G Qki QKI, KH domain containing RNA binding IMP RGD PMID:22178871 RGD:10045994 NCBI chr 1:50,387,698...50,501,568
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 IMP RGD PMID:18276108 RGD:9835371 NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521
JBrowse link
G Rgl2 ral guanine nucleotide dissociation stimulator-like 2 acts_upstream_of_or_within ISO (MGI:5547674|PMID:24069211) RGD PMID:24069211 MGI:5547674 NCBI chr20:4,948,495...4,956,774
Ensembl chr20:4,948,497...4,969,911
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO (MGI:3702339|PMID:17251350) RGD PMID:17251350 MGI:3702339 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Sirt1 sirtuin 1 IMP RGD PMID:20089851 RGD:2316169 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sirt4 sirtuin 4 IMP RGD PMID:24029877 RGD:9586053 NCBI chr12:41,125,533...41,139,440
Ensembl chr12:41,131,262...41,139,439
JBrowse link
G Sirt5 sirtuin 5 IMP RGD PMID:24192575 RGD:9586058 NCBI chr17:21,310,028...21,337,137
Ensembl chr17:21,310,028...21,337,101
JBrowse link
G Slc25a4 solute carrier family 25 member 4 IDA RGD PMID:22564366 RGD:9681467 NCBI chr16:46,072,935...46,076,730
Ensembl chr16:46,072,939...46,076,733
JBrowse link
G Trip10 thyroid hormone receptor interactor 10 IMP RGD PMID:23915320 RGD:11535145 NCBI chr 9:2,133,085...2,147,795
Ensembl chr 9:2,133,671...2,147,799
JBrowse link
negative regulation of muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcyap1 adenylate cyclase activating polypeptide 1 IDA RGD PMID:16891268 RGD:2325292 NCBI chr 9:113,102,632...113,122,500
Ensembl chr 9:113,103,718...113,109,773
JBrowse link
G Alox12 arachidonate 12-lipoxygenase, 12S type involved_in ISO
ISS
(PMID:23578768)
GO_REF:0000024
RGD
UniProt
PMID:23578768 GO_REF:0000024 NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542
JBrowse link
G Cav1 caveolin 1 IMP RGD PMID:18039791 RGD:2289114 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 IMP RGD PMID:14654373 RGD:2289997 NCBI chr 9:69,523,733...70,596,743
Ensembl chr 9:69,531,481...70,596,595
JBrowse link
G Hmox1 heme oxygenase 1 IDA RGD PMID:12396617 RGD:728858 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Igf1 insulin-like growth factor 1 IMP RGD PMID:16699953 RGD:12904920 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Igf1r insulin-like growth factor 1 receptor IMP RGD PMID:19507001 RGD:2311507 NCBI chr 1:121,549,839...121,838,545
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Lifr LIF receptor subunit alpha IMP RGD PMID:15927854 RGD:1581857 NCBI chr 2:56,224,393...56,292,988
Ensembl chr 2:56,250,120...56,286,699
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 IMP RGD PMID:15089039 RGD:1625255 NCBI chr 2:32,878,942...32,963,611
Ensembl chr 2:32,882,032...32,963,631
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:12668584 RGD:1642633 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Smad1 SMAD family member 1 IEP RGD PMID:11408477 RGD:1643239 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO
GO_REF:0000024
(MGI:5142149|PMID:21616078)
UniProt
RGD
PMID:21616078 GO_REF:0000024 MGI:5142149 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
negative regulation of smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1a angiotensin II receptor, type 1a acts_upstream_of_or_within ISO (MGI:4367529|PMID:19508861) RGD PMID:19508861 MGI:4367529 NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946
JBrowse link
G Apoh apolipoprotein H involved_in IEA
ISO
GO_REF:0000107
(PMID:15534879)
Ensembl
RGD
PMID:15534879 GO_REF:0000107 NCBI chr10:93,342,435...93,356,334
Ensembl chr10:93,310,977...93,356,329
JBrowse link
G Arrb2 arrestin, beta 2 IMP RGD PMID:19171933 RGD:5510006 NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850
JBrowse link
G Dipk2a divergent protein kinase domain 2A involved_in
acts_upstream_of_or_within
ISO (PMID:24269490)
(MGI:5689795|PMID:24269490)
RGD PMID:24269490 MGI:5689795 NCBI chr 8:95,070,695...95,089,815
Ensembl chr 8:95,030,279...95,089,815
JBrowse link
G Edn1 endothelin 1 IDA RGD PMID:16857764 RGD:4892596 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Gria4 glutamate ionotropic receptor AMPA type subunit 4 involved_in ISO
IEA
RNAcentral:URS00003E47B1_9606 (PMID:32151690)
GO_REF:0000107
RGD
Ensembl
PMID:32151690 GO_REF:0000107 NCBI chr 8:1,562,118...2,035,035
Ensembl chr 8:1,562,119...2,034,979
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:21557011 RGD:10045551 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO (PMID:16942485) RGD PMID:16942485 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Lrp6 LDL receptor related protein 6 involved_in ISO (PMID:15271658) RGD PMID:15271658 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Lypd3 Ly6/Plaur domain containing 3 involved_in ISO RNAcentral:URS00003E47B1_9606 (PMID:32151690) RGD PMID:32151690 NCBI chr 1:80,226,449...80,230,901
Ensembl chr 1:80,226,449...80,230,901
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of_or_within ISO MGI:3037444 (MGI:4838750|PMID:19153266) RGD PMID:19153266 MGI:4838750 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region IMP RGD PMID:15247148 RGD:2306423 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
JBrowse link
negative regulation of striated muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag3 BAG cochaperone 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3530294 (MGI:3656163|PMID:16936253)
(PMID:19085932)
RGD PMID:16936253 PMID:19085932 PMID:21873635 MGI:3656163, RGD:13792537 NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IMP RGD PMID:19505369 RGD:5508691 NCBI chr 2:27,997,523...28,018,983
Ensembl chr 2:27,997,525...28,019,703
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:468,862...481,992
Ensembl chr 7:469,723...481,992
JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO (MGI:5573029|PMID:24312627) RGD PMID:24312627 MGI:5573029 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
JBrowse link
negative regulation of vascular associated smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr CF transmembrane conductance regulator IMP RGD PMID:24999019 RGD:11567225 NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in ISO
IEA
(PMID:27021683)
GO_REF:0000107
RGD
Ensembl
PMID:27021683 GO_REF:0000107 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase IMP RGD PMID:28404743 RGD:13792653 NCBI chr 4:157,962,312...157,967,158
Ensembl chr 4:157,962,343...157,966,235
JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA
(PMID:26166810)
GO_REF:0000107
RGD
Ensembl
PMID:26166810 GO_REF:0000107 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Mir17 microRNA 17 involved_in ISO (PMID:27640178) RGD PMID:27640178 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir21 microRNA 21 involved_in ISO (PMID:28522568) RGD PMID:28522568 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir210 microRNA 210 involved_in ISO (PMID:22886504) RGD PMID:22886504 NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454
JBrowse link
G Slc7a5 solute carrier family 7 member 5 IDA RGD PMID:29687865 RGD:151357004 NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823
JBrowse link
positive regulation of cardiac muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:24465706 RGD:11039412 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:6455379|PMID:31819041) RGD PMID:31819041 MGI:6455379 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in IDA PMID:23028672 BHF-UCL PMID:23028672 RGD:10047368 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Camk2a calcium/calmodulin-dependent protein kinase II alpha involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:5444772|PMID:23051746)
ParkinsonsUK-UCL
RGD
PMID:23051746 GO_REF:0000024 MGI:5444772 NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IMP PMID:23702479 BHF-UCL PMID:23702479 RGD:10047251 NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178
JBrowse link
G Capn1 calpain 1 IMP RGD PMID:22402252 RGD:13792584 NCBI chr 1:203,275,912...203,300,848
Ensembl chr 1:203,277,344...203,300,177
JBrowse link
G Capn2 calpain 2 IMP RGD PMID:21268078 RGD:13792651 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969
JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 IMP RGD PMID:22562555 RGD:7257691 NCBI chr 9:75,729,493...75,735,868
Ensembl chr 9:75,729,115...75,739,425
JBrowse link
G Eif5a eukaryotic translation initiation factor 5A IMP RGD PMID:20930373 RGD:10395362 NCBI chr10:54,640,104...54,644,845
Ensembl chr10:54,640,024...54,644,656
JBrowse link
G Fbxo32 F-box protein 32 involved_in IGI PMID:24117217 BHF-UCL PMID:24117217 PMID:24117217 RGD:11079185, RGD:11079185 NCBI chr 7:89,731,626...89,764,761
Ensembl chr 7:89,730,232...89,765,436
JBrowse link
G Fndc1 fibronectin type III domain containing 1 acts_upstream_of_or_within IMP PMID:19723622 MGI PMID:19723622 RGD:8554041 NCBI chr 1:47,281,839...47,364,247
Ensembl chr 1:47,281,844...47,364,259
JBrowse link
G Gata6 GATA binding protein 6 involved_in IMP PMID:25950484 BHF-UCL PMID:25950484 RGD:11541106 NCBI chr18:2,188,121...2,219,532
Ensembl chr18:2,188,121...2,219,532
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IMP RGD PMID:19298698 RGD:5508693 NCBI chr 2:27,997,523...28,018,983
Ensembl chr 2:27,997,525...28,019,703
JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 IMP RGD PMID:15055478 RGD:10402811 NCBI chr14:82,056,347...82,064,083
Ensembl chr14:82,056,347...82,064,083
JBrowse link
G Ltk leukocyte receptor tyrosine kinase involved_in ISO (PMID:10445845) RGD PMID:10445845 NCBI chr 3:106,734,675...106,741,552
Ensembl chr 3:106,734,676...106,743,369
JBrowse link
G Map3k5 mitogen-activated protein kinase kinase kinase 5 IMP RGD PMID:22635076 RGD:10412335 NCBI chr 1:14,685,776...14,904,935
Ensembl chr 1:14,685,492...14,904,800
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 IMP RGD PMID:11259632 RGD:10412677 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mff mitochondrial fission factor IMP RGD PMID:23867156 RGD:12879458 NCBI chr 9:84,007,798...84,036,039
Ensembl chr 9:84,007,798...84,036,039
JBrowse link
G Mir34a microRNA 34a involved_in ISO (PMID:23426265) RGD PMID:23426265 NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
JBrowse link
G Pou4f2 POU class 4 homeobox 2 involved_in IMP PMID:25356872 BHF-UCL PMID:25356872 RGD:13792547 NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
JBrowse link
G Pten phosphatase and tensin homolog IMP RGD PMID:22609523 RGD:12801498 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Smad4 SMAD family member 4 IMP RGD PMID:15949472 RGD:12903280 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:5319187 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:1857263 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 IMP RGD PMID:33495812 RGD:127229929 NCBI chr 9:12,763,819...12,779,285
Ensembl chr 9:12,763,819...12,779,203
JBrowse link
positive regulation of muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grk2 G protein-coupled receptor kinase 2 IMP RGD PMID:26631573 RGD:11554709 NCBI chr 1:201,581,480...201,601,580
Ensembl chr 1:201,581,480...201,601,582
JBrowse link
positive regulation of smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin, beta 1 IMP RGD PMID:19171933 RGD:5510006 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO UniProtKB:P08226 (MGI:4943829|PMID:20381282) RGD PMID:20381282 MGI:4943829 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:16942485) RGD PMID:16942485 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:16942485) RGD PMID:16942485 NCBI chr 2:152,965,769...152,973,035
Ensembl chr 2:152,965,769...152,972,734
JBrowse link
G Il12b interleukin 12B involved_in ISO (PMID:16942485) RGD PMID:16942485 NCBI chr10:28,888,832...28,903,796
Ensembl chr10:28,893,008...28,902,903
JBrowse link
G Map2k4 mitogen activated protein kinase kinase 4 involved_in ISO (MGI:5770039|PMID:24705900) RGD PMID:24705900 MGI:5770039 NCBI chr10:50,343,227...50,447,956
Ensembl chr10:50,344,915...50,447,993
JBrowse link
G Mir28 microRNA 28 acts_upstream_of ISO (PMID:32151690) RGD PMID:32151690 NCBI chr11:75,975,523...75,975,608
Ensembl chr11:75,975,523...75,975,608
JBrowse link
G Pdcd4 programmed cell death 4 IMP RGD PMID:20357187 RGD:9589087 NCBI chr 1:252,921,342...252,944,278
Ensembl chr 1:252,921,392...252,944,275
JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within ISO (MGI:4367529|PMID:19508861) RGD PMID:19508861 MGI:4367529 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
positive regulation of striated muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp12 caspase 12 IMP RGD PMID:26801321 RGD:11571826 NCBI chr 8:2,642,296...2,669,549
Ensembl chr 8:2,642,434...2,674,037
JBrowse link
positive regulation of vascular associated smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 acts_upstream_of_or_within ISO MGI:2180373|MGI:3819270|MGI:5550363|MGI:5812282 (MGI:5812283|PMID:27812542) RGD PMID:27812542 MGI:5812283 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G E2f3 E2F transcription factor 3 involved_in ISO (PMID:22886504) RGD PMID:22886504 NCBI chr17:34,601,756...34,679,139
Ensembl chr17:34,601,830...34,676,253
JBrowse link
G Mfn2 mitofusin 2 involved_in ISO (PMID:27640178) RGD PMID:27640178 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mir1 microRNA 1 involved_in ISO (PMID:26166810) RGD PMID:26166810 NCBI chr18:1,887,537...1,887,623 JBrowse link
G Mir125a microRNA 125a IDA RGD PMID:29700287 RGD:26884455 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
JBrowse link
G Mir140 microRNA 140 involved_in ISO (PMID:27021683) RGD PMID:27021683 NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
JBrowse link
G Mir1b microRNA 1b involved_in ISO (PMID:26166810) RGD PMID:26166810 NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
JBrowse link
G Mir24-2 microRNA 24-2 involved_in ISO (PMID:23774796) RGD PMID:23774796 NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790
JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO (PMID:28522568) RGD PMID:28522568 NCBI chr 1:252,921,342...252,944,278
Ensembl chr 1:252,921,392...252,944,275
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in ISO (PMID:28522568) RGD PMID:28522568 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within ISO (MGI:4367529|PMID:19508861) RGD PMID:19508861 MGI:4367529 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Sod2 superoxide dismutase 2 involved_in ISO (PMID:27021683) RGD PMID:27021683 NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189
JBrowse link
G Stk4 serine/threonine kinase 4 involved_in IMP PMID:23485012 BHF-UCL PMID:23485012 RGD:13506273 NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744
JBrowse link
regulation of cardiac muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr1a bone morphogenetic protein receptor type 1A NOT|involved_in ISO (MGI:3040576|PMID:15073157), (MGI:3810850|PMID:18667463) RGD PMID:15073157 PMID:18667463 MGI:3040576 MGI:3810850 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Eng endoglin NOT|involved_in ISO (MGI:3721185|PMID:17628518) RGD PMID:17628518 MGI:3721185 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
regulation of muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO MGI:3589208 (MGI:5312165|PMID:22358842) RGD PMID:22358842 MGI:5312165 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
regulation of smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1a angiotensin II receptor, type 1a acts_upstream_of_or_within ISO MGI:2384310 (MGI:4367529|PMID:19508861) RGD PMID:19508861 MGI:4367529 NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946
JBrowse link
G Pde1a phosphodiesterase 1A IMP RGD PMID:16514069 RGD:2312521 NCBI chr 3:64,745,140...65,025,178
Ensembl chr 3:64,747,269...65,024,874
JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within ISO MGI:87964 (MGI:4367529|PMID:19508861) RGD PMID:19508861 MGI:4367529 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:5306300|PMID:17098745) RGD PMID:17098745 MGI:5306300 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
regulation of vascular associated smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtr1a angiotensin II receptor, type 1a acts_upstream_of_or_within ISO MGI:2384310 (MGI:4367529|PMID:19508861) RGD PMID:19508861 MGI:4367529 NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946
JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within ISO MGI:87964 (MGI:4367529|PMID:19508861) RGD PMID:19508861 MGI:4367529 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 acts_upstream_of ISO MGI:3037444 (MGI:4838750|PMID:19153266) RGD PMID:19153266 MGI:4838750 NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
JBrowse link
striated muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag3 BAG cochaperone 3 acts_upstream_of ISO MGI:3530294 (MGI:3656163|PMID:16936253) RGD PMID:16936253 MGI:3656163 NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
vascular associated smooth muscle cell apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rbm10 RNA binding motif protein 10 acts_upstream_of ISO (MGI:4367529|PMID:19508861) RGD PMID:19508861 MGI:4367529 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20094
    cellular process 18691
      cell death 2260
        programmed cell death 2066
          apoptotic process 2009
            muscle cell apoptotic process 129
              negative regulation of muscle cell apoptotic process + 74
              positive regulation of muscle cell apoptotic process + 47
              regulation of muscle cell apoptotic process + 123
              smooth muscle cell apoptotic process + 41
              striated muscle cell apoptotic process + 77
paths to the root