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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of gene expression
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Accession:GO:0010629 term browser browse the term
Definition:Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
Comment:This term covers any process that negatively regulates the rate of production of a mature gene product, and so includes processes that negatively regulate that rate by reducing the level, stability or availability of intermediates in the process of gene expression. For example, it covers any process that reduces the level, stability or availability of mRNA or circRNA for translation and thereby reduces the rate of production of the encoded protein via translation.
Synonyms:related_synonym: gene silencing



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negative regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC2 ATP binding cassette subfamily C member 2 involved_in ISO PMID:17437408 ARUK-UCL PMID:17437408 RGD:14929203 NCBI chr14:110,955,698...111,038,898
Ensembl chr14:110,955,656...111,078,873
JBrowse link
G ACACB acetyl-CoA carboxylase beta involved_in ISO (MGI:3629477|PMID:12920182) UniProt PMID:12920182 MGI:3629477 NCBI chr14:41,621,574...41,739,916 JBrowse link
G ACE angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:15,394,487...15,414,609
Ensembl chr12:15,394,487...15,414,639
JBrowse link
G ACVR1B activin A receptor type 1B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5461254|PMID:23152446) Ensembl
MGI
PMID:23152446 GO_REF:0000107 MGI:5461254 NCBI chr 5:17,314,322...17,350,726
Ensembl chr 5:17,314,290...17,350,722
JBrowse link
G ACVRL1 activin A receptor like type 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:17,267,483...17,284,155
Ensembl chr 5:17,263,907...17,286,276
JBrowse link
G ADAM10 ADAM metallopeptidase domain 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:24530397) Ensembl
ARUK-UCL
PMID:24530397 GO_REF:0000107 NCBI chr 1:113,289,480...113,407,940
Ensembl chr 1:113,289,197...113,413,569
JBrowse link
G ADIPOR2 adiponectin receptor 2 ISO RGD PMID:29237572 RGD:24922203 NCBI chr 5:68,755,789...68,807,247
Ensembl chr 5:68,755,811...68,807,235
JBrowse link
G ADNP activity dependent neuroprotector homeobox ISO p53 RGD PMID:15314252 RGD:2312780 NCBI chr17:52,316,388...52,350,732
Ensembl chr17:52,317,669...52,350,757
JBrowse link
G AFF2 AF4/FMR2 family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5496978|PMID:23562910) Ensembl
MGI
PMID:23562910 GO_REF:0000107 MGI:5496978 NCBI chr  X:120,777,559...121,263,574
Ensembl chr  X:120,777,237...121,263,574
JBrowse link
G AGT angiotensinogen involved_in ISO (PMID:24296617) BHF-UCL PMID:24296617 NCBI chr14:59,643,030...59,656,835
Ensembl chr14:59,643,292...59,672,428
JBrowse link
G AIF1 allograft inflammatory factor 1 ISO 10 proteins, including ADAM3 RGD PMID:16157606 RGD:2313017 NCBI chr 7:23,711,752...23,731,191
Ensembl chr 7:23,711,722...23,731,671
JBrowse link
G AKIRIN2 akirin 2 ISO MKP-1 RGD PMID:18460465 RGD:2306009 NCBI chr 1:56,047,188...56,075,342
Ensembl chr 1:56,043,345...56,070,164
JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in ISO (MGI:4881905|PMID:19933931) BHF-UCL PMID:19933931 MGI:4881905
G ANAPC2 anaphase promoting complex subunit 2 ISO Ppfia1 RGD PMID:17419996 RGD:14696670
G ANXA7 annexin A7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:76,205,238...76,234,646
Ensembl chr14:76,205,224...76,234,631
JBrowse link
G APLN apelin involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:106,236,746...106,246,563
Ensembl chr  X:106,236,748...106,246,378
JBrowse link
G APLNR apelin receptor acts_upstream_of ISO (MGI:5584055|PMID:23603510) BHF-UCL PMID:23603510 MGI:5584055
G APOE apolipoprotein E involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,259...51,377,794
JBrowse link
G APP amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:189,434,854...189,716,120
Ensembl chr13:189,434,869...189,716,057
JBrowse link
G ATOH8 atonal bHLH transcription factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:58,964,541...59,001,620
Ensembl chr 3:58,964,541...59,001,146
JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:64,336,354...64,445,669
Ensembl chr 9:64,336,499...64,445,663
JBrowse link
G AURKA aurora kinase A involved_in ISO (PMID:28218735) UniProt PMID:28218735 NCBI chr17:56,954,838...56,972,435 JBrowse link
G AXIN1 axin 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3804621|PMID:18076571) MGI
Ensembl
PMID:18076571 GO_REF:0000107 MGI:3804621 NCBI chr 3:41,344,908...41,393,999
Ensembl chr 3:41,337,071...41,393,997
JBrowse link
G BAK1 BCL2 antagonist/killer 1 ISO p16, cyclin D1, COX 2 RGD PMID:18349538 RGD:2316126 NCBI chr 7:29,808,849...29,815,345 JBrowse link
G BBS2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO (MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) MGI PMID:18317593 PMID:19150989 MGI:3794515 MGI:3836843 NCBI chr 6:18,542,383...18,575,338
Ensembl chr 6:18,542,383...18,575,524
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO (MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) MGI PMID:18317593 PMID:19150989 MGI:3794515 MGI:3836843 NCBI chr 7:60,631,913...60,693,359 JBrowse link
G BCL11A BAF chromatin remodeling complex subunit BCL11A acts_upstream_of_or_within ISO (MGI:4355757|PMID:19657335) MGI PMID:19657335 MGI:4355757 NCBI chr 3:81,195,217...81,296,165
Ensembl chr 3:81,196,294...81,296,165
JBrowse link
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3512872|PMID:15322112) Ensembl
MGI
PMID:15322112 GO_REF:0000107 MGI:3512872 NCBI chr17:15,750,487...15,762,982
Ensembl chr17:15,749,835...15,761,215
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2135612|PMID:11493558) Ensembl
MGI
PMID:11493558 GO_REF:0000107 MGI:2135612 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2175930|PMID:11854453) Ensembl
BHF-UCL
PMID:11854453 GO_REF:0000107 MGI:2175930 NCBI chr14:87,743,270...87,891,790
Ensembl chr14:87,742,459...87,891,793
JBrowse link
G BRIP1 BRCA1 interacting helicase 1 ISO RGD PMID:12511571 RGD:11251702 NCBI chr12:36,498,138...36,639,847
Ensembl chr12:36,443,697...36,634,088
JBrowse link
G C1QTNF3 C1q and TNF related 3 involved_in ISO (PMID:20952387) UniProt PMID:20952387 NCBI chr16:20,032,973...20,059,905 JBrowse link
G CCL3L1 chemokine (C-C motif) ligand 3-like 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr12:39,491,999...39,493,345
Ensembl chr12:39,491,885...39,493,370
JBrowse link
G CCN2 cellular communication network factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4413658|PMID:18597638) Ensembl
MGI
PMID:18597638 GO_REF:0000107 MGI:4413658 NCBI chr 1:31,674,398...31,677,697
Ensembl chr 1:31,673,798...31,677,696
JBrowse link
G CCNB1 cyclin B1 ISO c-mos RGD PMID:15291744 RGD:1578405 NCBI chr16:47,338,239...47,348,385
Ensembl chr16:47,338,110...47,348,381
JBrowse link
G CCR1 C-C motif chemokine receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:29,227,218...29,233,862
Ensembl chr13:29,227,220...29,233,960
JBrowse link
G CD28 CD28 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:107,128,103...107,155,431
Ensembl chr15:107,128,208...107,162,943
JBrowse link
G CD34 CD34 molecule involved_in ISO (PMID:15969628) UniProt PMID:15969628 NCBI chr 9:134,912,793...134,937,763
Ensembl chr 9:134,913,121...134,937,762
JBrowse link
G CD36 CD36 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:99,685,748...99,782,296
Ensembl chr 9:99,605,181...99,782,105
JBrowse link
G CD3E CD3e molecule involved_in ISO (PMID:23817958) UniProt PMID:23817958 NCBI chr 9:45,619,730...45,633,972
Ensembl chr 9:45,619,481...45,635,379
JBrowse link
G CD46 CD46 molecule, complement regulatory protein involved_in ISO (PMID:23086448) UniProt PMID:23086448 NCBI chr 9:135,025,439...135,078,910 JBrowse link
G CDK1 cyclin dependent kinase 1 acts_upstream_of_or_within ISO PMID:28350193 ARUK-UCL PMID:28350193 RGD:40902962 NCBI chr14:64,233,945...64,255,290
Ensembl chr14:64,233,988...64,395,453
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3617096|PMID:11981756) Ensembl
MGI
PMID:11981756 GO_REF:0000107 MGI:3617096 NCBI chr 7:32,354,776...32,363,771
Ensembl chr 7:32,359,455...32,363,761
JBrowse link
G CELF1 CUGBP Elav-like family member 1 acts_upstream_of_or_within ISO (PMID:27230130) ARUK-UCL PMID:27230130 NCBI chr 2:15,066,518...15,161,478
Ensembl chr 2:15,066,537...15,187,797
JBrowse link
G CHD4 chromodomain helicase DNA binding protein 4 involved_in ISO (PMID:33301730) UniProt PMID:33301730 NCBI chr 5:64,071,627...64,105,212
Ensembl chr 5:64,072,697...64,105,198
JBrowse link
G CHMP1A charged multivesicular body protein 1A acts_upstream_of_or_within ISO (PMID:11559747) UniProt PMID:11559747 NCBI chr 6:351,878...358,655
Ensembl chr 6:351,922...358,655
JBrowse link
G CILP cartilage intermediate layer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:163,236,864...163,271,222
Ensembl chr 1:163,237,100...163,271,164
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:25,155,652...25,158,517
Ensembl chr 1:25,155,664...25,160,279
JBrowse link
G CLDN19 claudin 19 involved_in ISO (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chr 6:168,695,246...168,699,683
Ensembl chr 6:168,695,246...168,699,683
JBrowse link
G CLDN3 claudin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:11,019,073...11,020,102
Ensembl chr 3:11,019,295...11,019,960
JBrowse link
G CLDN5 claudin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:51,161,490...51,162,382
Ensembl chr14:51,161,032...51,163,482
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:25038453) BHF-UCL PMID:25038453 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G CNPY2 canopy FGF signaling regulator 2 involved_in
acts_upstream_of
IEA
ISO
(MGI:5427047|PMID:22378787) Ensembl
BHF-UCL
PMID:22378787 GO_REF:0000107 MGI:5427047 NCBI chr 5:21,707,834...21,711,292
Ensembl chr 5:21,707,834...21,711,292
JBrowse link
G CPNE1 copine 1 involved_in ISO (PMID:18212740) UniProt PMID:18212740 NCBI chr17:38,956,489...38,997,189
Ensembl chr17:38,956,489...38,997,265
JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:21816899 RGD:10059418 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,697,408...110,771,755
JBrowse link
G CREB3L1 cAMP responsive element binding protein 3 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:16,186,206...16,220,948
Ensembl chr 2:16,186,210...16,220,937
JBrowse link
G CRH corticotropin releasing hormone ISO Lhb RGD PMID:20663987 RGD:5508201 NCBI chr 4:68,481,696...68,486,122
Ensembl chr 4:68,483,977...68,486,118
JBrowse link
G CRHR2 corticotropin releasing hormone receptor 2 ISO Lhb, Fshb RGD PMID:19193717 RGD:2317015 NCBI chr18:42,251,755...42,296,457
Ensembl chr18:42,251,749...42,295,468
JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:50,528,950...50,558,664
Ensembl chr14:50,528,954...50,558,663
JBrowse link
G CRYAA crystallin alpha A acts_upstream_of_or_within ISO (MGI:3758141|PMID:17893660) MGI PMID:17893660 MGI:3758141 NCBI chr13:206,293,877...206,297,050 JBrowse link
G CRYAB crystallin alpha B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3758141|PMID:17893660) Ensembl
MGI
PMID:17893660 GO_REF:0000107 MGI:3758141 NCBI chr 9:39,638,505...39,643,530
Ensembl chr 9:39,638,502...39,643,530
JBrowse link
G CTCF CCCTC-binding factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:28,188,002...28,261,009
Ensembl chr 6:28,195,668...28,261,009
JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:29048659) Ensembl
ARUK-UCL
PMID:29048659 GO_REF:0000107 NCBI chr 8:69,932,646...69,935,861
Ensembl chr 8:69,932,643...69,935,861
JBrowse link
G DAXX death domain associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:29,676,854...29,681,145
Ensembl chr 7:29,676,854...29,681,110
JBrowse link
G DDRGK1 DDRGK domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:32,479,981...32,491,401
Ensembl chr17:32,479,976...32,491,400
JBrowse link
G DGKQ diacylglycerol kinase theta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:313,325...325,089
Ensembl chr 8:313,327...325,095
JBrowse link
G DICER1 dicer 1, ribonuclease III involved_in
acts_upstream_of
ISO (PMID:23322395)
(PMID:22105995)
ARUK-UCL PMID:22105995 PMID:23322395 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
G DIP2A disco interacting protein 2 homolog A involved_in IEA Ensembl GO_REF:0000107
G DLL4 delta like canonical Notch ligand 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,376,720...130,386,411
Ensembl chr 1:130,376,720...130,386,713
JBrowse link
G DNMT1 DNA methyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:27021683)
(MGI:6270117|PMID:29117290)
BHF-UCL
MGI
PMID:27021683 PMID:29117290 MGI:6270117 NCBI chr 2:68,981,564...69,040,364
Ensembl chr 2:68,981,564...69,029,919
JBrowse link
G DYSF dysferlin acts_upstream_of_or_within ISO (MGI:3775586|PMID:18276788) MGI PMID:18276788 MGI:3775586 NCBI chr 3:71,020,143...71,237,658
Ensembl chr 3:71,020,141...71,246,967
JBrowse link
G EDN1 endothelin 1 involved_in ISO PMID:28484848 BHF-UCL PMID:28484848 RGD:13601996 NCBI chr 7:8,752,018...8,758,354
Ensembl chr 7:8,751,695...8,758,348
JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO (MGI:5478659|PMID:23152784) MGI PMID:23152784 MGI:5478659 NCBI chr 3:57,423,894...57,506,247
Ensembl chr 3:57,423,875...57,506,247
JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 ISO Arc RGD PMID:17632064 RGD:10044262 NCBI chr12:2,285,679...2,311,750
Ensembl chr12:2,285,225...2,311,750
JBrowse link
G EMILIN1 elastin microfibril interfacer 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:112,031,910...112,039,928
Ensembl chr 3:112,031,919...112,046,437
JBrowse link
G ENG endoglin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:268,309,379...268,343,861
Ensembl chr 1:268,306,120...268,343,827
JBrowse link
G ERP29 endoplasmic reticulum protein 29 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:39,687,028...39,695,748
Ensembl chr14:39,687,029...39,695,752
JBrowse link
G ESR1 estrogen receptor 1 involved_in ISO (PMID:21695196) UniProt PMID:21695196 NCBI chr 1:14,217,032...14,604,906
Ensembl chr 1:14,217,036...14,493,363
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO Cdkn1c, also known as p57kip2, cyclin-dependent kinase inhibitor 1c RGD PMID:22821416 RGD:7242953 NCBI chr 9:109,384,976...109,450,943
Ensembl chr 9:109,384,995...109,450,941
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:76,482,027...76,699,354
Ensembl chr 8:76,482,022...76,699,351
JBrowse link
G FERMT1 FERM domain containing kindlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:15,080,585...15,137,947
Ensembl chr17:15,080,587...15,137,753
JBrowse link
G FGF19 fibroblast growth factor 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,583,027...3,586,985
Ensembl chr 2:3,583,027...3,587,825
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:3775898|PMID:18191119)
(MGI:5548021|PMID:24259513)
MGI PMID:18191119 PMID:24259513 MGI:3775898 MGI:5548021 NCBI chr15:48,053,895...48,106,634
Ensembl chr15:48,053,340...48,106,746
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO (MGI:4437389|PMID:20053668) MGI PMID:20053668 MGI:4437389 NCBI chr 8:879,151...894,968
Ensembl chr 8:879,151...895,912
JBrowse link
G FGFR4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (MGI:5548021|PMID:24259513) MGI PMID:24259513 MGI:5548021 NCBI chr 2:80,841,536...80,853,791
Ensembl chr 2:80,841,536...80,853,796
JBrowse link
G FLCN folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:61,029,186...61,045,400 JBrowse link
G FLOT2 flotillin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:45,102,205...45,120,503
Ensembl chr12:45,101,514...45,120,463
JBrowse link
G FMR1 FMRP translational regulator 1 involved_in ISO (MGI:5473740|PMID:23235829) RGD
UniProt
PMID:23235829 PMID:24338128 MGI:5473740 RGD:11667958 NCBI chr  X:120,361,232...120,400,282
Ensembl chr  X:120,361,229...120,399,835
JBrowse link
G FOXO1 forkhead box O1 involved_in IMP (PMID:24280217) AgBase PMID:24280217 NCBI chr11:15,317,222...15,410,059
Ensembl chr11:15,317,124...15,410,473
JBrowse link
G FOXP1 forkhead box P1 involved_in ISO (PMID:30111844) ARUK-UCL PMID:30111844 NCBI chr13:52,346,844...52,974,358
Ensembl chr13:52,347,849...52,974,261
JBrowse link
G FOXP3 forkhead box P3 acts_upstream_of_or_within ISO (MGI:5569680|PMID:24501220) MGI PMID:24501220 MGI:5569680 NCBI chr  X:43,303,777...43,328,164
Ensembl chr  X:43,303,782...43,328,735
JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:77,584,675...77,810,605
Ensembl chr 1:77,585,439...77,810,581
JBrowse link
G GAS2L1 growth arrest specific 2 like 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:46,449,767...46,455,278
Ensembl chr14:46,449,787...46,455,276
JBrowse link
G GATA2 GATA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:71,981,139...71,997,626
Ensembl chr13:71,984,063...71,997,622
JBrowse link
G GATA3 GATA binding protein 3 acts_upstream_of_or_within ISO (MGI:3708031|PMID:17357106) MGI PMID:17357106 MGI:3708031 NCBI chr10:63,367,684...63,397,977
Ensembl chr10:63,367,660...63,388,859
JBrowse link
G GATA4 GATA binding protein 4 involved_in ISO (MGI:5780531|PMID:25590961) BHF-UCL PMID:25590961 MGI:5780531 NCBI chr14:14,858,470...14,938,156
Ensembl chr14:14,858,159...14,939,941
JBrowse link
G GATA5 GATA binding protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:61,824,891...61,834,742
Ensembl chr17:61,824,899...61,834,267
JBrowse link
G GGNBP2 gametogenetin binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5779255|PMID:26764350) Ensembl
MGI
PMID:26764350 GO_REF:0000107 MGI:5779255 NCBI chr12:38,074,033...38,111,719
Ensembl chr12:38,074,050...38,111,719
JBrowse link
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3849919|PMID:19439426) MGI
Ensembl
PMID:19439426 GO_REF:0000107 MGI:3849919 NCBI chr 1:40,988,818...41,002,129
Ensembl chr 1:40,988,515...41,002,137
JBrowse link
G GPER1 G protein-coupled estrogen receptor 1 involved_in IMP (PMID:23840305) AgBase PMID:23840305 NCBI chr 3:711,427...715,982
Ensembl chr 3:712,160...715,982
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in
acts_upstream_of
IEA
ISO
(PMID:27050373), (PMID:28122350) Ensembl
ARUK-UCL
PMID:27050373 PMID:28122350 GO_REF:0000107 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,574
JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:16,460,089...16,462,979
Ensembl chr14:16,460,119...16,462,735
JBrowse link
G HAVCR2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:25578313) UniProt PMID:25578313 NCBI chr16:66,138,157...66,160,568
Ensembl chr16:66,139,535...66,160,562
JBrowse link
G HDAC1 histone deacetylase 1 involved_in ISO (PMID:16581785) CACAO PMID:16581785 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,412
JBrowse link
G HDAC5 histone deacetylase 5 acts_upstream_of_or_within ISO (MGI:5569711|PMID:23926128) MGI PMID:23926128 MGI:5569711 NCBI chr12:19,077,910...19,119,463
Ensembl chr12:19,077,997...19,123,140
JBrowse link
G HDAC8 histone deacetylase 8 ISO Stx1a RGD PMID:28559304 RGD:13208603 NCBI chr  X:58,210,182...58,450,681 JBrowse link
G HES1 hes family bHLH transcription factor 1 ISO RGD PMID:19670267 RGD:9685170 NCBI chr13:131,135,970...131,137,865
Ensembl chr13:131,135,724...131,138,236
JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in
acts_upstream_of_or_within
ISO (MGI:3604167|PMID:16025100)
(MGI:5427763|PMID:22615585)
BHF-UCL
MGI
PMID:16025100 PMID:22615585 MGI:3604167 MGI:5427763 NCBI chr 4:56,859,640...56,863,807
Ensembl chr 4:56,859,663...56,863,789
JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4454633|PMID:20382855)
(MGI:5427763|PMID:22615585)
Ensembl
MGI
PMID:20382855 PMID:22615585 GO_REF:0000107 MGI:4454633 MGI:5427763 NCBI chr 1:37,219,887...37,231,321
Ensembl chr 1:37,219,883...37,231,385
JBrowse link
G HEYL hes related family bHLH transcription factor with YRPW motif like involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5427763|PMID:22615585) Ensembl
MGI
PMID:22615585 GO_REF:0000107 MGI:5427763 NCBI chr 6:95,442,655...95,459,597
Ensembl chr 6:95,442,661...95,459,575
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:190,625,436...190,673,926
Ensembl chr 1:190,625,181...190,674,850
JBrowse link
G HINFP histone H4 transcription factor involved_in ISO (PMID:15541338), (PMID:17974976) UniProt PMID:15541338 PMID:17974976 NCBI chr 9:46,336,130...46,354,623
Ensembl chr 9:46,336,155...46,380,544
JBrowse link
G HMGB2 high mobility group box 2 involved_in ISS AgBase GO_REF:0000024 NCBI chr14:16,709,966...16,712,288
Ensembl chr14:16,710,047...16,717,126
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO Mmp9 RGD PMID:16683234 RGD:10042976 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,633
JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO Orm1 RGD PMID:9553145 RGD:2303817 NCBI chr10:30,975,639...30,987,955
Ensembl chr10:30,975,693...30,987,940
JBrowse link
G HRAS HRas proto-oncogene, GTPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:299,662...302,539
Ensembl chr 2:299,660...302,501
JBrowse link
G HSF1 heat shock transcription factor 1 ISO Igf2r RGD PMID:24786827 RGD:10402547 NCBI chr 4:463,531...486,483
Ensembl chr 4:461,559...486,473
JBrowse link
G HSPA4 heat shock protein family A (Hsp70) member 4 ISO Tnf, Il1b, Icam1, Nos2 RGD PMID:17473852 RGD:5688754 NCBI chr 2:135,345,724...135,391,112
Ensembl chr 2:135,305,749...135,394,185
JBrowse link
G ID1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO (MGI:4453908|PMID:20231428) MGI PMID:20231428 MGI:4453908 NCBI chr17:35,316,518...35,317,742
Ensembl chr17:35,315,964...35,317,744
JBrowse link
G ID2 inhibitor of DNA binding 2 involved_in ISS
ISO
p21 UniProt
RGD
PMID:11706002 GO_REF:0000024 RGD:619536 NCBI chr 3:127,500,759...127,503,207
Ensembl chr 3:127,500,759...127,503,257
JBrowse link
G ID3 inhibitor of DNA binding 3, HLH protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5512805|PMID:23523789) Ensembl
MGI
PMID:23523789 GO_REF:0000107 MGI:5512805 NCBI chr 6:81,422,541...81,424,169
Ensembl chr 6:81,422,539...81,424,075
JBrowse link
G IFNG interferon gamma involved_in ISO (PMID:23817958)
(MGI:6304699|PMID:29061364)
UniProt
ARUK-UCL
PMID:23817958 PMID:29061364 MGI:6304699 NCBI chr 5:32,477,906...32,482,670
Ensembl chr 5:32,477,848...32,482,752
JBrowse link
G IGF1 insulin like growth factor 1 involved_in ISO (PMID:29167509)
(MGI:4881905|PMID:19933931)
BHF-UCL PMID:19933931 PMID:29167509 MGI:4881905 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,037
JBrowse link
G INPPL1 inositol polyphosphate phosphatase like 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3528799|PMID:15654325) Ensembl
MGI
PMID:15654325 GO_REF:0000107 MGI:3528799 NCBI chr 9:6,793,971...6,807,286
Ensembl chr 9:6,792,884...6,808,028
JBrowse link
G INS insulin involved_in
acts_upstream_of
IEA
ISO
(PMID:31501273) Ensembl
ARUK-UCL
PMID:31501273 GO_REF:0000107 NCBI chr 2:1,496,842...1,498,052
Ensembl chr 2:1,496,842...1,497,841
JBrowse link
G INSR insulin receptor ISO SOCS3 levels in hypothalamus RGD PMID:17585961 RGD:2290473 NCBI chr 2:71,797,209...71,939,923
Ensembl chr 2:71,797,204...71,936,139
JBrowse link
G IQGAP3 IQ motif containing GTPase activating protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3835718|PMID:18604197) Ensembl
MGI
PMID:18604197 GO_REF:0000107 MGI:3835718 NCBI chr 4:93,495,999...93,556,915
Ensembl chr 4:93,513,079...93,559,020
JBrowse link
G ITGB8 integrin subunit beta 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:89,342,245...89,450,701
Ensembl chr 9:89,341,141...89,450,679
JBrowse link
G JMJD4 jumonji domain containing 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:50,804,797...50,812,180
Ensembl chr 2:50,804,797...50,812,185
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3054495|PMID:15340049) MGI
Ensembl
PMID:15340049 GO_REF:0000107 MGI:3054495 NCBI chr 2:1,675,323...1,989,110
Ensembl chr 2:1,675,360...1,989,111
JBrowse link
G KDM2A lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) MGI PMID:25463925 MGI:5615026 NCBI chr 2:5,238,690...5,357,799
Ensembl chr 2:5,240,287...5,357,164
JBrowse link
G KDM4A lysine demethylase 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:167,597,954...167,642,381
Ensembl chr 6:167,597,956...167,642,309
JBrowse link
G KDR kinase insert domain receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:41,809,116...41,856,379
Ensembl chr 8:41,809,116...41,856,339
JBrowse link
G KEAP1 kelch like ECH associated protein 1 ISO NQO1 RGD PMID:11439354 PMID:20026152 RGD:6902900 RGD:727319 NCBI chr 2:69,280,940...69,290,267
Ensembl chr 2:69,276,336...69,297,835
JBrowse link
G KLF4 Kruppel like factor 4 involved_in ISO (PMID:22267480) BHF-UCL PMID:22267480 NCBI chr 1:248,604,817...248,609,574
Ensembl chr 1:248,604,820...248,609,574
JBrowse link
G KPNA7 karyopherin subunit alpha 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5913752|PMID:20699224) Ensembl
MGI
PMID:20699224 GO_REF:0000107 MGI:5913752 NCBI chr 3:6,167,382...6,201,282
Ensembl chr 3:6,167,385...6,296,230
JBrowse link
G L3MBTL2 L3MBTL histone methyl-lysine binding protein 2 acts_upstream_of_or_within ISO (MGI:5700289|PMID:22770845) MGI PMID:22770845 MGI:5700289 NCBI chr 5:7,257,806...7,277,633
Ensembl chr 5:7,253,644...7,277,576
JBrowse link
G LDLR low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:69,828,348...69,864,823
Ensembl chr 2:69,828,332...69,864,823
JBrowse link
G LGALS9 galectin 9 involved_in ISO (PMID:25578313)
(MGI:5491117|PMID:23408620)
(PMID:23408620)
UniProt PMID:23408620 PMID:25578313 MGI:5491117 NCBI chr12:44,155,079...44,173,634 JBrowse link
G LGMN legumain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:114,176,217...114,210,096
Ensembl chr 7:114,173,693...114,217,103
JBrowse link
G LOC100510975 coiled-coil domain-containing protein 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:6108413|PMID:28827783)
GO_Central
MGI
PMID:21873635 PMID:28827783 MGI:6108413 NCBI chr10:59,052,979...59,144,791
Ensembl chr10:59,052,910...59,144,797
JBrowse link
G LOC100520273 poly [ADP-ribose] polymerase 15 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:137,882,179...137,936,389 JBrowse link
G LOC100621006 RE1-silencing transcription factor-like involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:56,048,280...56,215,011
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G LOC100622028 tripartite motif-containing protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:4,197,922...4,204,688
Ensembl chr 9:4,197,922...4,204,664
JBrowse link
G LOC110258578 interleukin-1 beta-like ISO Nr2e1 RGD PMID:23168994 RGD:7175538
G LRP1 LDL receptor related protein 1 involved_in ISO (MGI:6434720|PMID:31023188) BHF-UCL PMID:31023188 MGI:6434720 NCBI chr 5:22,435,636...22,519,276 JBrowse link
G LRP3 LDL receptor related protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,988,446...43,001,424
Ensembl chr 6:42,988,468...43,003,256
JBrowse link
G MAEL maelstrom spermatogenic transposon silencer acts_upstream_of_or_within ISO (MGI:3813746|PMID:18694567) MGI PMID:18694567 MGI:3813746 NCBI chr 4:83,990,266...84,040,465
Ensembl chr 4:83,975,347...84,040,709
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 1:164,381,892...164,469,313
Ensembl chr 1:164,381,845...164,471,226
JBrowse link
G MAP2K2 mitogen-activated protein kinase kinase 2 involved_in ISO PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 2:74,626,739...74,651,352
Ensembl chr 2:74,626,658...74,651,348
JBrowse link
G MAPT microtubule associated protein tau involved_in ISO (PMID:23164821) ARUK-UCL PMID:23164821 NCBI chr12:17,098,259...17,211,483
Ensembl chr12:17,095,587...17,211,368
JBrowse link
G MARK1 microtubule affinity regulating kinase 1 involved_in
acts_upstream_of
IEA
ISO
(PMID:31281935) Ensembl
ARUK-UCL
PMID:31281935 GO_REF:0000107 NCBI chr10:9,980,277...10,106,507
Ensembl chr10:9,980,383...10,104,874
JBrowse link
G MAX MYC associated factor X ISO RGD PMID:7791753 RGD:2316831 NCBI chr 7:89,142,966...89,168,265
Ensembl chr 7:89,120,822...89,168,270
JBrowse link
G MBD1 methyl-CpG binding domain protein 1 ISO Gfap RGD PMID:16881068 RGD:9588644 NCBI chr 1:99,848,193...99,917,347
Ensembl chr 1:99,848,184...99,917,328
JBrowse link
G MDM2 MDM2 proto-oncogene ISO p53 RGD PMID:19850968 RGD:2317361 NCBI chr 5:33,105,717...33,137,602
Ensembl chr 5:33,086,994...33,178,089
JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in ISO Bdnf
(PMID:23960241)
RGD
BHF-UCL
PMID:19217433 PMID:23960241 RGD:11069822 NCBI chr  X:124,735,523...124,789,063
Ensembl chr  X:124,735,656...124,789,110
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,122,407...96,296,842
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO (MGI:5529574|PMID:23994610) MGI PMID:23994610 MGI:5529574 NCBI chr18:29,426,044...29,541,526
Ensembl chr18:29,426,044...29,541,512
JBrowse link
G MIF macrophage migration inhibitory factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,840,303...49,841,063
Ensembl chr14:49,840,305...49,862,317
JBrowse link
G MIR1 microRNA mir-1 acts_upstream_of_or_within ISO (MGI:5052204|PMID:21690310) MGI PMID:21690310 MGI:5052204 NCBI chr17:61,894,036...61,894,143
Ensembl chr17:61,894,036...61,894,143
JBrowse link
G MIR133A-1 microRNA mir-133a-1 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr17:61,904,781...61,904,883
Ensembl chr17:61,904,781...61,904,883
JBrowse link
G MIR133A-2 microRNA mir-133a-2 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 6:106,998,899...106,998,971
Ensembl chr 6:106,998,896...106,998,982
JBrowse link
G MIR135-1 microRNA mir-135-1 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr13:34,441,079...34,441,168
Ensembl chr13:34,441,079...34,441,168
JBrowse link
G MIR135-2 microRNA mir-135-2 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 5:86,141,185...86,141,284
Ensembl chr 5:86,141,185...86,141,284
JBrowse link
G MIR137 microRNA mir-137 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 4:119,793,993...119,794,074
Ensembl chr 4:119,793,984...119,794,088
JBrowse link
G MIR140 microRNA mir-140 acts_upstream_of_or_within ISO (MGI:5574156|PMID:24349493) MGI PMID:24349493 MGI:5574156 NCBI chr 6:17,077,530...17,077,599
Ensembl chr 6:17,077,507...17,077,620
JBrowse link
G MIR155 microRNA mir-155 acts_upstream_of_or_within ISO (MGI:5426073|PMID:22517757) MGI PMID:22517757 MGI:5426073 NCBI chr13:189,138,822...189,138,902
Ensembl chr13:189,138,822...189,138,902
JBrowse link
G MIR15A microRNA mir-15a acts_upstream_of_or_within ISO (MGI:3844748|PMID:19416898) MGI PMID:19416898 MGI:3844748 NCBI chr11:17,757,463...17,757,541
Ensembl chr11:17,757,460...17,757,554
JBrowse link
G MIR181B-1 microRNA mir-181b-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr10:21,696,492...21,696,571
Ensembl chr10:21,696,492...21,696,571
JBrowse link
G MIR181B-2 microRNA mir-181b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 1:265,499,111...265,499,196
Ensembl chr 1:265,499,108...265,499,196
JBrowse link
G MIR186 microRNA mir-186 acts_upstream_of_or_within ISO (MGI:5771621|PMID:26710318) MGI PMID:26710318 MGI:5771621 NCBI chr 6:141,943,328...141,943,409
Ensembl chr 6:141,943,328...141,943,409
JBrowse link
G MIR18A microRNA mir-18a acts_upstream_of_or_within ISO (MGI:5461254|PMID:23152446) MGI PMID:23152446 MGI:5461254 NCBI chr11:60,734,791...60,734,882
Ensembl chr11:60,734,791...60,734,882
JBrowse link
G MIR196A-1 microRNA mir-196a-1 acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502) MGI PMID:15105502 MGI:3042528 NCBI chr12:24,886,316...24,886,395
Ensembl chr12:24,886,307...24,886,408
JBrowse link
G MIR196A-2 microRNA mir-196a-2 acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502) MGI PMID:15105502 MGI:3042528 NCBI chr 5:19,204,442...19,204,548
Ensembl chr 5:19,204,442...19,204,548
JBrowse link
G MIR204 microRNA mir-204 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 1:224,065,494...224,065,602
Ensembl chr 1:224,065,494...224,065,602
JBrowse link
G MIR205 microRNA mir-205 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 9:133,517,078...133,517,146
Ensembl chr 9:133,517,078...133,517,146
JBrowse link
G MIR208B microRNA mir-208b acts_upstream_of_or_within ISO (MGI:4359539|PMID:19726871) MGI PMID:19726871 MGI:4359539 NCBI chr 7:75,667,786...75,667,865
Ensembl chr 7:75,667,786...75,667,865
JBrowse link
G MIR21 microRNA mir-21 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:5693365 NCBI chr12:36,065,267...36,065,358
Ensembl chr12:36,065,267...36,065,358
JBrowse link
G MIR217-1 microRNA mir-217-1 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 3:85,341,255...85,341,361
Ensembl chr 3:85,341,255...85,341,361
JBrowse link
G MIR218-1 microRNA mir-218-1 acts_upstream_of_or_within ISO (MGI:5297649|PMID:20947829) MGI PMID:20947829 MGI:5297649 NCBI chr 8:15,047,602...15,047,685
Ensembl chr 8:15,047,602...15,047,685
JBrowse link
G MIR218B microRNA mir-218b acts_upstream_of_or_within ISO (MGI:5297649|PMID:20947829) MGI PMID:20947829 MGI:5297649 NCBI chr16:55,115,926...55,116,009
Ensembl chr16:55,115,926...55,116,009
JBrowse link
G MIR219B microRNA mir-219b acts_upstream_of_or_within ISO (MGI:4439416|PMID:20223197) MGI PMID:20223197 MGI:4439416 NCBI chr 1:268,816,967...268,817,050
Ensembl chr 1:268,816,961...268,817,057
JBrowse link
G MIR23A microRNA mir-23a acts_upstream_of_or_within ISO (MGI:5516374|PMID:24101522)
(MGI:5013854|PMID:21628588)
MGI PMID:21628588 PMID:24101522 MGI:5013854 MGI:5516374 NCBI chr 2:65,308,117...65,308,186
Ensembl chr 2:65,308,117...65,308,186
JBrowse link
G MIR29A microRNA mir-29a acts_upstream_of_or_within ISO (MGI:5013521|PMID:21522133) MGI PMID:21522133 MGI:5013521 NCBI chr18:18,040,032...18,040,117
Ensembl chr18:18,040,032...18,040,118
JBrowse link
G MIR29B-1 microRNA mir-29b-1 acts_upstream_of_or_within ISO (MGI:5013521|PMID:21522133) MGI PMID:21522133 MGI:5013521 NCBI chr18:18,039,629...18,039,709
Ensembl chr18:18,039,629...18,039,709
JBrowse link
G MIR29B-2 microRNA mir-29b-2 acts_upstream_of_or_within ISO (MGI:5013521|PMID:21522133) MGI PMID:21522133 MGI:5013521 NCBI chr 9:135,019,079...135,019,162
Ensembl chr 9:135,019,075...135,019,164
JBrowse link
G MIR29C microRNA mir-29c acts_upstream_of_or_within ISO (MGI:5013521|PMID:21522133) MGI PMID:21522133 MGI:5013521 NCBI chr 9:135,019,638...135,019,725
Ensembl chr 9:135,019,638...135,019,725
JBrowse link
G MIR30C-1 microRNA mir-30c-1 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 6:170,426,781...170,426,860
Ensembl chr 6:170,426,781...170,426,860
JBrowse link
G MIR30C-2 microRNA mir-30c-2 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 1:51,383,782...51,383,861
Ensembl chr 1:51,383,782...51,383,861
JBrowse link
G MIR320 microRNA mir-320 acts_upstream_of_or_within ISO (MGI:5447874|PMID:22925886) MGI PMID:22925886 MGI:5447874 NCBI chr14:6,520,901...6,520,980
Ensembl chr14:6,520,901...6,520,980
JBrowse link
G MIR34C-1 microRNA mir-34c-1 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588)
(MGI:5578416|PMID:24982181)
MGI PMID:21628588 PMID:24982181 MGI:5013854 MGI:5578416 NCBI chr 9:39,280,278...39,280,357
Ensembl chr 9:39,280,278...39,280,357
JBrowse link
G MIR489 microRNA mir-489 acts_upstream_of_or_within ISO (MGI:5312165|PMID:22358842) MGI PMID:22358842 MGI:5312165 NCBI chr 9:73,330,690...73,330,770
Ensembl chr 9:73,330,690...73,330,770
JBrowse link
G MIR874 microRNA mir-874 acts_upstream_of_or_within ISO (MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:5551666 NCBI chr 2:139,660,118...139,660,201
Ensembl chr 2:139,660,118...139,660,201
JBrowse link
G MIRLET7A-1 microRNA let-7a-1 acts_upstream_of_or_within ISO (MGI:5461254|PMID:23152446)
(MGI:4359358|PMID:18604195)
MGI PMID:18604195 PMID:23152446 MGI:4359358 MGI:5461254 NCBI chr 9:49,152,586...49,152,665
Ensembl chr 9:49,152,586...49,152,665
JBrowse link
G MIRLET7A-2 microRNA let-7a-2 acts_upstream_of_or_within ISO (MGI:5461254|PMID:23152446)
(MGI:4359358|PMID:18604195)
MGI PMID:18604195 PMID:23152446 MGI:4359358 MGI:5461254 NCBI chr 3:43,465,667...43,465,758
Ensembl chr 3:43,465,667...43,465,758
JBrowse link
G MKKS MKKS centrosomal shuttling protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) Ensembl
MGI
PMID:18317593 PMID:19150989 GO_REF:0000107 MGI:3794515 MGI:3836843 NCBI chr17:19,341,024...19,363,007
Ensembl chr17:19,340,977...19,362,871
JBrowse link
G MMP8 matrix metallopeptidase 8 involved_in ISO (MGI:6201889|PMID:25049354) ARUK-UCL PMID:25049354 MGI:6201889 NCBI chr 9:33,384,034...33,397,637
Ensembl chr 9:33,384,028...33,396,947
JBrowse link
G MORC1 MORC family CW-type zinc finger 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:150,387,942...150,561,808
Ensembl chr13:150,387,629...150,562,636
JBrowse link
G MSR1 macrophage scavenger receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:3,859,903...3,939,612
Ensembl chr17:3,857,171...3,939,726
JBrowse link
G MUSK muscle associated receptor tyrosine kinase ISO epsilon-acetylcholine receptor RGD PMID:15604144 RGD:2317103 NCBI chr 1:251,650,151...251,758,538
Ensembl chr 1:251,650,710...251,756,608
JBrowse link
G MYADM myeloid associated differentiation marker involved_in ISO (PMID:23264465) UniProt PMID:23264465 NCBI chr 6:56,236,306...56,278,577
Ensembl chr 6:56,236,306...56,278,582
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO Adipor1 RGD PMID:23349663 RGD:7207857 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,119...12,461,078
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:121,543,201...121,549,678
Ensembl chr 3:121,542,275...121,549,491
JBrowse link
G MYT1 myelin transcription factor 1 acts_upstream_of_or_within ISO (MGI:3763794|PMID:17928203) MGI PMID:17928203 MGI:3763794 NCBI chr17:62,955,052...63,020,652
Ensembl chr17:62,979,350...63,014,697
JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO transcript levels RGD PMID:19608741 RGD:5688288 NCBI chr12:59,256,868...59,392,564 JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 involved_in ISO (PMID:18776082) UniProt PMID:18776082 NCBI chr 2:143,688,946...143,734,523
Ensembl chr 2:143,628,784...143,734,525
JBrowse link
G NDFIP2 Nedd4 family interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,493,981...51,560,305
Ensembl chr11:51,420,166...51,560,305
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:26687115) BHF-UCL PMID:26687115 NCBI chr 8:118,391,010...118,478,927
Ensembl chr 8:118,390,637...118,506,691
JBrowse link
G NKX3-1 NK3 homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:7,783,296...7,787,036
Ensembl chr14:7,782,421...7,787,034
JBrowse link
G NME1 NME/NM23 nucleoside diphosphate kinase 1 ISO Mmp2 RGD PMID:12010125 RGD:633207 NCBI chr12:27,416,308...27,435,044
Ensembl chr12:27,416,337...27,436,160
JBrowse link
G NOCT nocturnin involved_in ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,412...87,909,655
JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5051994|PMID:21624478) Ensembl
MGI
PMID:21624478 GO_REF:0000107 MGI:5051994 NCBI chr12:32,891,321...32,892,206
Ensembl chr12:32,891,321...32,892,206
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,944...44,327,111
JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107
G NOTCH2 notch receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:100,951,522...101,152,348
Ensembl chr 4:100,951,507...101,150,198
JBrowse link
G NPM1 nucleophosmin 1 acts_upstream_of_or_within ISO (MGI:3805393|PMID:18625840) MGI PMID:18625840 MGI:3805393 NCBI chr16:52,767,263...52,781,862
Ensembl chr16:52,765,296...52,781,740
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:84,225,670...84,228,156
Ensembl chr 6:84,225,694...84,228,094
JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 ISO RGD PMID:7971966 RGD:61674 NCBI chr 6:55,238,536...55,245,457
Ensembl chr 6:55,237,953...55,245,456
JBrowse link
G NRXN1 neurexin 1 involved_in ISO (PMID:26078884) ARUK-UCL PMID:26078884 NCBI chr 3:89,799,426...90,914,205
Ensembl chr 3:89,799,543...90,914,205
JBrowse link
G NTS neurotensin involved_in
acts_upstream_of
IEA
ISO
(PMID:21806946) Ensembl
ARUK-UCL
PMID:21806946 GO_REF:0000107 NCBI chr 5:96,261,299...96,272,947
Ensembl chr 5:96,261,375...96,272,824
JBrowse link
G OCLN occludin involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:47,600,175...47,652,435
Ensembl chr16:47,600,498...47,654,033
JBrowse link
G OLR1 oxidized low density lipoprotein receptor 1 involved_in ISO PMID:28108289 BHF-UCL PMID:28108289 RGD:13464258 NCBI chr 5:61,799,356...61,809,691
Ensembl chr 5:61,799,286...61,810,624
JBrowse link
G OPRD1 opioid receptor delta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:85,775,576...85,827,170
Ensembl chr 6:85,785,227...85,825,592
JBrowse link
G OVOL2 ovo like zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:26,417,793...26,451,707
Ensembl chr17:26,417,795...26,451,928
JBrowse link
G PARK7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:68,629,327...68,645,147
Ensembl chr 6:68,629,214...68,645,520
JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 involved_in ISO (PMID:23575687) UniProt PMID:23575687 NCBI chr 4:688,511...695,808 JBrowse link
G PARP14 poly(ADP-ribose) polymerase family member 14 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:137,809,499...137,865,383
Ensembl chr13:137,809,503...137,865,383
JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:137,960,987...138,000,862
Ensembl chr13:137,961,357...138,002,024
JBrowse link
G PAWR pro-apoptotic WT1 regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:101,693,145...101,797,842
Ensembl chr 5:101,692,143...101,797,835
JBrowse link
G PC pyruvate carboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,566,608...5,587,797
Ensembl chr 2:5,518,430...5,587,797
JBrowse link
G PDCD10 programmed cell death 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:106,517,408...106,558,959
Ensembl chr13:106,517,432...106,559,632
JBrowse link
G PDGFB platelet derived growth factor subunit B involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 5:8,986,461...9,007,446 JBrowse link
G PGR progesterone receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:32,035,684...32,129,776
Ensembl chr 9:32,035,684...32,129,221
JBrowse link
G PIAS3 protein inhibitor of activated STAT 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3836131|PMID:17442941) Ensembl
MGI
PMID:17442941 GO_REF:0000107 MGI:3836131 NCBI chr 4:99,463,418...99,475,141
Ensembl chr 4:99,465,690...99,475,140
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:19,835,934...19,947,239
Ensembl chr 9:19,835,938...20,104,632
JBrowse link
G PICK1 protein interacting with PRKCA 1 involved_in ISO PMID:24749734 ParkinsonsUK-UCL PMID:24749734 RGD:10047218 NCBI chr 5:9,808,444...9,829,677
Ensembl chr 5:9,808,450...9,889,930
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in ISO PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr13:117,193,935...117,282,151
Ensembl chr13:117,180,544...117,277,232
JBrowse link
G PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta involved_in ISO PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 6:70,026,254...70,086,950
Ensembl chr 6:70,026,373...70,099,244
JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:78,863,195...78,884,663
Ensembl chr 6:78,863,190...78,884,644
JBrowse link
G PLA2G3 phospholipase A2 group III involved_in
acts_upstream_of_or_within
IEA
ISO
PMID:26637123
(PMID:26637123)
(MGI:5912601|PMID:26637123)
Ensembl
MGI
PMID:26637123 GO_REF:0000107 MGI:5912601 RGD:11342276 NCBI chr14:47,923,005...47,928,762
Ensembl chr14:47,923,787...47,928,810
JBrowse link
G PLAG1 PLAG1 zinc finger involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:75,646,585...75,696,718
Ensembl chr 4:75,646,592...75,694,365
JBrowse link
G PMP22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (MGI:5517729|PMID:23847051) MGI PMID:23847051 MGI:5517729 NCBI chr12:58,679,773...58,734,195
Ensembl chr12:58,679,776...58,707,953
JBrowse link
G POU2F1 POU class 2 homeobox 1 involved_in ISO PMID:28108289 BHF-UCL PMID:28108289 RGD:13464258 NCBI chr 4:83,592,051...83,776,465
Ensembl chr 4:83,596,194...83,777,283
JBrowse link
G POU3F2 POU class 3 homeobox 2 involved_in ISO (MGI:5449484|PMID:23069940) CACAO PMID:23069940 MGI:5449484 NCBI chr 1:65,835,375...65,842,872 JBrowse link
G POU4F1 POU class 4 homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:50,729,746...50,732,626
Ensembl chr11:50,730,428...50,732,340
JBrowse link
G POU5F1 POU class 5 homeobox 1 involved_in ISO (MGI:5490149|PMID:23495099) AgBase PMID:23495099 MGI:5490149 NCBI chr 7:23,564,654...23,570,691 JBrowse link
G PPARG peroxisome proliferator activated receptor gamma involved_in
acts_upstream_of_or_within
ISO (PMID:28467929)
PMID:28867608
(MGI:6106785|PMID:28467929)
(MGI:5462034|PMID:21880694)
ARUK-UCL
BHF-UCL
PMID:21880694 PMID:28467929 PMID:28867608 MGI:5462034 MGI:6106785 RGD:150521633 NCBI chr13:68,301,566...68,433,951
Ensembl chr13:68,302,655...68,433,947
JBrowse link
G PPP2CB protein phosphatase 2 catalytic subunit beta acts_upstream_of
acts_upstream_of_or_within
ISO (PMID:28159925) ARUK-UCL PMID:28159925 NCBI chr15:54,295,786...54,325,220
Ensembl chr15:54,294,995...54,325,213
JBrowse link
G PPP3CA protein phosphatase 3 catalytic subunit alpha involved_in ISO (MGI:5562625|PMID:24161931) BHF-UCL PMID:24161931 MGI:5562625 NCBI chr 8:119,429,181...119,754,615
Ensembl chr 8:119,428,743...119,754,650
JBrowse link
G PRDM1 PR/SET domain 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5014435|PMID:21670299) Ensembl
MGI
PMID:21670299 GO_REF:0000107 MGI:5014435 NCBI chr 1:72,309,096...72,335,474
Ensembl chr 1:72,311,880...72,335,466
JBrowse link
G PRDM4 PR/SET domain 4 involved_in ISO PMID:23048031 ParkinsonsUK-UCL PMID:23048031 RGD:10054084 NCBI chr 5:12,638,335...12,668,890
Ensembl chr 5:12,638,488...12,668,878
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,321...25,783,610
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:155,683,392...155,754,283
Ensembl chr 6:155,681,781...155,754,272
JBrowse link
G PRKAR1A protein kinase cAMP-dependent type I regulatory subunit alpha involved_in
acts_upstream_of
IEA
ISO
(PMID:28159925) Ensembl
ARUK-UCL
PMID:28159925 GO_REF:0000107 NCBI chr12:11,662,344...11,681,490
Ensembl chr12:11,662,347...11,681,202
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G PSEN1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,181...96,569,132
JBrowse link
G PTH parathyroid hormone involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:45,757,398...45,760,433
Ensembl chr 2:45,757,398...45,760,415
JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 involved_in ISO (PMID:23991106)
(MGI:5562517|PMID:23871208), (MGI:5640942|PMID:23991106)
UniProt PMID:23871208 PMID:23991106 MGI:5562517 MGI:5640942 NCBI chr 4:106,692,102...106,758,101
Ensembl chr 4:106,686,604...106,758,099
JBrowse link
G PTRH2 peptidyl-tRNA hydrolase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:35,924,030...35,933,229
Ensembl chr12:35,924,035...35,933,226
JBrowse link
G RACK1 receptor for activated C kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:57,280,192...57,284,846
Ensembl chr 2:57,279,857...57,284,855
JBrowse link
G RARA retinoic acid receptor alpha acts_upstream_of_or_within ISO (MGI:3771251|PMID:18026104) MGI PMID:18026104 MGI:3771251 NCBI chr12:22,047,449...22,085,759
Ensembl chr12:22,047,442...22,085,674
JBrowse link
G RB1 RB transcriptional corepressor 1 acts_upstream_of_or_within ISO (MGI:5607667|PMID:25100735)
(PMID:25100735)
MGI PMID:25100735 MGI:5607667 NCBI chr11:19,186,754...19,317,642
Ensembl chr11:19,186,759...19,317,690
JBrowse link
G RBL1 RB transcriptional corepressor like 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25100735) MGI
Ensembl
PMID:25100735 GO_REF:0000107 NCBI chr17:40,201,214...40,279,318
Ensembl chr17:40,194,949...40,279,350
JBrowse link
G RBL2 RB transcriptional corepressor like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25100735) MGI
Ensembl
PMID:25100735 GO_REF:0000107 NCBI chr 6:31,757,718...31,802,047
Ensembl chr 6:31,748,739...31,802,022
JBrowse link
G RBMS3 RNA binding motif single stranded interacting protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:14,968,921...16,458,470
Ensembl chr13:15,711,425...16,462,750
JBrowse link
G RCOR1 REST corepressor 1 involved_in IEA Ensembl GO_REF:0000107
G REL REL proto-oncogene, NF-kB subunit involved_in ISO (PMID:22065573) CACAO PMID:22065573 NCBI chr 3:80,861,862...80,912,233
Ensembl chr 3:80,870,860...80,911,956
JBrowse link
G REST RE1 silencing transcription factor involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 8:56,035,182...56,061,140
Ensembl chr 8:56,035,150...56,215,013
JBrowse link
G RNASEH2B ribonuclease H2 subunit B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5435090|PMID:22802351) Ensembl
MGI
PMID:22802351 GO_REF:0000107 MGI:5435090 NCBI chr11:16,825,799...16,911,959
Ensembl chr11:16,829,801...16,911,879
JBrowse link
G ROBO1 roundabout guidance receptor 1 involved_in ISO (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr13:175,348,223...176,479,482
Ensembl chr13:175,505,366...176,479,482
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,353,119...125,491,963
JBrowse link
G ROS1 ROS proto-oncogene 1, receptor tyrosine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2675865|PMID:12773415) Ensembl
MGI
PMID:12773415 GO_REF:0000107 MGI:2675865 NCBI chr 1:44,409,877...44,535,784
Ensembl chr 1:44,409,931...44,534,874
JBrowse link
G SAA3 serum amyloid A-3 protein involved_in IDA (PMID:21701568) AgBase PMID:21701568 NCBI chr 2:41,021,349...41,025,950
Ensembl chr 2:40,904,116...41,025,952
JBrowse link
G SAMD7 sterile alpha motif domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:108,622,402...108,641,412
Ensembl chr13:108,615,445...108,641,119
JBrowse link
G SERPINE1 serpin family E member 1 ISO caspase-3 RGD PMID:22659625 RGD:8547927 NCBI chr 3:8,863,738...8,871,572
Ensembl chr 3:8,863,695...8,871,564
JBrowse link
G SERPINF1 serpin family F member 1 ISO Hif1a RGD PMID:21922517 RGD:8554899 NCBI chr12:47,949,004...47,959,471
Ensembl chr12:47,943,051...47,959,472
JBrowse link
G SETDB1 SET domain bifurcated histone lysine methyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:98,259,801...98,293,238
Ensembl chr 4:98,260,373...98,293,096
JBrowse link
G SFMBT2 Scm like with four mbt domains 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:63,877,033...64,070,867
Ensembl chr10:63,877,025...64,070,772
JBrowse link
G SFRP1 secreted frizzled related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4429763|PMID:19850029) Ensembl
MGI
PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chr17:10,436,414...10,489,773
Ensembl chr17:10,436,426...10,489,748
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:75,337,311...75,345,926
Ensembl chr 8:75,337,133...75,345,926
JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:205,081,227...205,285,359
Ensembl chr 1:205,081,227...205,285,343
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,718...2,555,484
JBrowse link
G SIRT1 sirtuin 1 involved_in IMP (PMID:19479941), (PMID:20203304), (PMID:23296834) AgBase PMID:19479941 PMID:20203304 PMID:23296834 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,157...71,123,299
JBrowse link
G SLC24A3 solute carrier family 24 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6104227|PMID:28602864) Ensembl
ARUK-UCL
PMID:28602864 GO_REF:0000107 MGI:6104227 NCBI chr17:27,270,232...27,780,535
Ensembl chr17:27,270,214...27,780,529
JBrowse link
G SLC2A10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:16550171) ARUK-UCL PMID:16550171 NCBI chr17:48,824,054...48,842,811
Ensembl chr17:48,824,414...48,843,201
JBrowse link
G SLC35C2 solute carrier family 35 member C2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849897|PMID:20837470) Ensembl
MGI
PMID:20837470 GO_REF:0000107 MGI:4849897 NCBI chr17:48,512,442...48,525,161
Ensembl chr17:48,509,578...48,525,150
JBrowse link
G SLC7A5 solute carrier family 7 member 5 involved_in
acts_upstream_of
IEA
ISO
(PMID:24038088) Ensembl
ARUK-UCL
PMID:24038088 GO_REF:0000107 NCBI chr 6:1,545,940...1,574,298
Ensembl chr 6:1,545,940...1,574,288
JBrowse link
G SLIT2 slit guidance ligand 2 acts_upstream_of_or_within ISO (MGI:3819920|PMID:18829537) MGI PMID:18829537 MGI:3819920 NCBI chr 8:14,758,426...15,149,515
Ensembl chr 8:14,756,619...15,149,510
JBrowse link
G SLIT3 slit guidance ligand 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3819920|PMID:18829537) Ensembl
MGI
PMID:18829537 GO_REF:0000107 MGI:3819920 NCBI chr16:54,551,536...55,221,427
Ensembl chr16:54,553,933...55,220,310
JBrowse link
G SMAD2 SMAD family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5461254|PMID:23152446) Ensembl
MGI
PMID:23152446 GO_REF:0000107 MGI:5461254 NCBI chr 1:97,415,360...97,511,388
Ensembl chr 1:97,415,716...97,511,358
JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:60,435,276...60,443,525
Ensembl chr12:60,435,273...60,443,520
JBrowse link
G SMO smoothened, frizzled class receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:19,450,730...19,478,796
Ensembl chr18:19,450,734...19,479,374
JBrowse link
G SNX12 sorting nexin 12 involved_in ISO (PMID:22709416) UniProt PMID:22709416 NCBI chr  X:57,099,521...57,108,636
Ensembl chr  X:57,085,544...57,108,533
JBrowse link
G SOX11 SRY-box transcription factor 11 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:129,797,438...129,800,568
Ensembl chr 3:129,798,704...129,800,329
JBrowse link
G SOX9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5524169|PMID:24218621) Ensembl
MGI
PMID:24218621 GO_REF:0000107 MGI:5524169 NCBI chr12:8,642,154...8,647,315
Ensembl chr12:8,642,158...8,647,315
JBrowse link
G SPI1 Spi-1 proto-oncogene involved_in ISO (PMID:29290617)
(MGI:6093262|PMID:28628103)
ARUK-UCL PMID:28628103 PMID:29290617 MGI:6093262 NCBI chr 2:15,227,850...15,245,679
Ensembl chr 2:15,227,829...15,245,667
JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 ISO Bcl2l11 RGD PMID:23737756 RGD:11039479 NCBI chr17:46,119,612...46,122,540
Ensembl chr17:46,119,409...46,173,944
JBrowse link
G SRY sex determining region Y acts_upstream_of_or_within ISO (MGI:3027475|PMID:11869290) MGI PMID:11869290 MGI:3027475 NCBI chr  Y:40,484,990...40,485,700
Ensembl chr  Y:40,484,990...40,485,700
JBrowse link
G STC2 stanniocalcin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:50,989,676...51,001,412
Ensembl chr16:50,989,432...51,004,484
JBrowse link
G STOX1 storkhead box 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:71,927,387...71,985,239
Ensembl chr14:71,928,399...71,985,233
JBrowse link
G TAF1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chr  X:57,382,211...57,466,700
Ensembl chr  X:57,382,354...57,466,697
JBrowse link
G TARDBP TAR DNA binding protein involved_in ISO (PMID:18305152) CACAO PMID:18305152 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,852...71,227,704
JBrowse link
G TBK1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:28,880,210...28,929,964
Ensembl chr 5:28,828,568...28,929,964
JBrowse link
G TCF4 transcription factor 4 acts_upstream_of_or_within ISO (MGI:4453908|PMID:20231428) MGI PMID:20231428 MGI:4453908 NCBI chr 1:104,718,809...105,079,919
Ensembl chr 1:104,719,137...105,079,919
JBrowse link
G TCL1A TCL1 family AKT coactivator A acts_upstream_of_or_within ISO (MGI:3759699|PMID:17938240) MGI PMID:17938240 MGI:3759699 NCBI chr 7:116,933,785...116,939,353 JBrowse link
G TERF2 telomeric repeat binding factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,605,748...17,631,795
Ensembl chr 6:17,605,346...17,631,793
JBrowse link
G TERT telomerase reverse transcriptase involved_in ISO (PMID:11927518) BHF-UCL PMID:11927518 NCBI chr16:79,258,591...79,276,421
Ensembl chr16:79,258,591...79,276,421
JBrowse link
G TFAP4 transcription factor AP-4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:38,043,735...38,060,820
Ensembl chr 3:38,048,128...38,060,819
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:29529050) BHF-UCL
MGI
PMID:29529050 GO_REF:0000024 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,169...49,349,048
JBrowse link
G TGFB2 transforming growth factor beta 2 involved_in ISO (PMID:25217442)
(MGI:5688835|PMID:21984612)
BHF-UCL
UniProt
PMID:21984612 PMID:25217442 MGI:5688835 NCBI chr10:8,306,136...8,435,307
Ensembl chr10:8,305,424...8,405,771
JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 involved_in ISO (MGI:5688831|PMID:22960625) BHF-UCL PMID:22960625 MGI:5688831 NCBI chr 4:125,109,939...125,310,788
Ensembl chr 4:125,101,190...125,316,796
JBrowse link
G TGIF1 TGFB induced factor homeobox 1 ISO tropoelastin RGD PMID:18441095 RGD:2317192 NCBI chr 6:103,226,395...103,234,591
Ensembl chr 6:103,226,397...103,235,856
JBrowse link
G TIPARP TCDD inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23275542) MGI
Ensembl
PMID:23275542 GO_REF:0000107 NCBI chr13:96,496,386...96,524,879
Ensembl chr13:96,496,439...96,525,848
JBrowse link
G TLE5 TLE family member 5, transcriptional modulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:75,492,208...75,501,543
Ensembl chr 2:75,492,207...75,501,543
JBrowse link
G TMF1 TATA element modulatory factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5440392|PMID:22553199) Ensembl
MGI
PMID:22553199 GO_REF:0000107 MGI:5440392 NCBI chr13:50,442,017...50,477,363
Ensembl chr13:50,444,256...50,477,291
JBrowse link
G TNF tumor necrosis factor involved_in
acts_upstream_of_or_within
ISO (PMID:15345745), (PMID:22267480), (PMID:26371161)
(MGI:5763710|PMID:26427354)
(PMID:22499991)
(PMID:24299952)
(PMID:20164187), (PMID:31124343), (PMID:31824476)
BHF-UCL
MGI
ARUK-UCL
PMID:15345745 PMID:20164187 PMID:22267480 PMID:22499991 PMID:24299952 More... MGI:5763710 NCBI chr 7:23,699,635...23,702,393
Ensembl chr 7:23,699,636...23,703,655
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A ISO type 2 iodothyronine deiodinase in alpha tanycytes RGD PMID:20501675 RGD:5130988 NCBI chr 5:64,319,349...64,331,876
Ensembl chr 5:64,319,073...64,331,909
JBrowse link
G TP53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:3805393|PMID:18625840) MGI PMID:18625840 MGI:3805393 NCBI chr12:52,939,643...52,953,786
Ensembl chr12:52,939,643...52,953,819
JBrowse link
G TP53INP1 tumor protein p53 inducible nuclear protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:41,747,654...41,766,688
Ensembl chr 4:41,747,726...41,766,684
JBrowse link
G TTBK1 tau tubulin kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,276,466...38,319,486
Ensembl chr 7:38,276,278...38,319,485
JBrowse link
G UCN urocortin ISO ghrelin
Pla2g6
RGD PMID:14563694 PMID:21540451 RGD:5490560 RGD:5508192 NCBI chr 3:111,834,082...111,835,932 JBrowse link
G UCN2 urocortin 2 ISO Fshb RGD PMID:19193717 RGD:2317015 NCBI chr13:31,261,196...31,261,824
Ensembl chr13:31,261,196...31,261,534
JBrowse link
G UPK3B uroplakin 3B involved_in ISO (PMID:18776082) UniProt PMID:18776082 NCBI chr 3:9,878,375...9,886,690 JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
ISO (PMID:22773844), (PMID:28977001)
(MGI:5461755|PMID:22886301)
(PMID:19148554)
BHF-UCL
MGI
ARUK-UCL
PMID:19148554 PMID:22773844 PMID:22886301 PMID:28977001 MGI:5461755 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,038
JBrowse link
G VEGFB vascular endothelial growth factor B involved_in ISO (PMID:18259607) UniProt PMID:18259607 NCBI chr 2:7,872,873...7,876,149 JBrowse link
G VHL von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5429122|PMID:22627278) Ensembl
MGI
PMID:22627278 GO_REF:0000107 MGI:5429122 NCBI chr13:66,334,535...66,342,401
Ensembl chr13:66,334,591...66,342,654
JBrowse link
G VPS35 VPS35 retromer complex component involved_in ISO (MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:5694519 NCBI chr 6:37,944,099...37,977,091
Ensembl chr 6:37,944,127...37,986,203
JBrowse link
G WDR35 WD repeat domain 35 ISO Gch1
Bcl2, Bcl2l1
RGD PMID:18671723 PMID:23289926 RGD:11553920 RGD:11553926 NCBI chr 3:118,209,112...118,279,050
Ensembl chr 3:118,209,099...118,279,041
JBrowse link
G WNT4 Wnt family member 4 involved_in
acts_upstream_of_or_within
ISO (PMID:15317892)
(MGI:2178881|PMID:11948913)
UniProt
MGI
PMID:11948913 PMID:15317892 MGI:2178881 NCBI chr 6:80,110,238...80,138,165 JBrowse link
G WNT8B Wnt family member 8B acts_upstream_of_or_within ISO (MGI:4413515|PMID:19890917) MGI PMID:19890917 MGI:4413515 NCBI chr14:111,562,278...111,589,897
Ensembl chr14:111,562,489...111,589,893
JBrowse link
G WWP2 WW domain containing E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:17,068,780...17,227,982
Ensembl chr 6:17,066,799...17,227,926
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
G YAP1 Yes1 associated transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:32,811,629...32,924,926
Ensembl chr 9:32,811,416...32,925,603
JBrowse link
G YY1 YY1 transcription factor involved_in ISO (PMID:22065573) CACAO PMID:22065573 NCBI chr 7:121,132,168...121,170,699
Ensembl chr 7:121,131,917...121,170,697
JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:144,855,821...145,668,320
Ensembl chr13:144,855,976...145,754,184
JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5450776|PMID:23034280) Ensembl
MGI
PMID:23034280 GO_REF:0000107 MGI:5450776 NCBI chr 4:94,780,404...94,796,722
Ensembl chr 4:94,780,401...94,798,588
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in ISO (PMID:18178554)
(MGI:5486545|PMID:18178554)
BHF-UCL PMID:18178554 MGI:5486545 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,195
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA UniProt GO_REF:0000117 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,011...92,495,574
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,406...97,204,700
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (MGI:3789238|PMID:16079796), (MGI:5609934|PMID:23117660) MGI PMID:16079796 PMID:23117660 MGI:3789238 MGI:5609934 NCBI chr 6:96,008,307...96,057,131
Ensembl chr 6:96,008,455...96,062,951
JBrowse link
G ZNF148 zinc finger protein 148 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:134,968,774...135,093,828
Ensembl chr13:134,969,770...135,089,173
JBrowse link
G ZNF281 zinc finger protein 281 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:23,033,629...23,039,121
Ensembl chr10:23,036,146...23,039,647
JBrowse link
G ZNF410 zinc finger protein 410 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:97,197,974...97,246,687
Ensembl chr 7:97,185,797...97,270,560
JBrowse link
G ZNF503 zinc finger protein 503 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:77,924,391...77,928,754
Ensembl chr14:77,924,820...77,928,453
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:103,675,164...103,871,245
Ensembl chr14:103,675,175...103,871,227
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,790...94,350,312
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:142,384,526...142,387,407
Ensembl chr 2:142,384,532...142,387,199
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,633
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:28275056)
(PMID:16126846)
CACAO
UniProt
PMID:16126846 PMID:28275056 NCBI chr 2:72,656,951...72,668,854
Ensembl chr 2:72,656,951...72,668,964
JBrowse link
G KLHL17 kelch like family member 17 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:63,320,898...63,328,093
Ensembl chr 6:63,322,184...63,336,139
JBrowse link
G MOV10 Mov10 RISC complex RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:107,738,089...107,763,873
Ensembl chr 4:107,738,112...107,763,596
JBrowse link
G PLEKHN1 pleckstrin homology domain containing N1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:63,328,054...63,336,140
Ensembl chr 6:63,322,314...63,336,140
JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,513...4,883,768
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) UniProt PMID:24375645 NCBI chr 7:13,126,518...13,139,504 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:116,204,807...116,292,455
Ensembl chr 9:116,209,094...116,292,366
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,852...71,227,704
JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:18,762,043...18,835,788
Ensembl chr13:18,761,445...18,830,563
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,015...59,013,495
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,195
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in ISO (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chr 1:16,463,532...16,498,974
Ensembl chr 1:16,465,252...16,498,971
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,011...92,495,574
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,406...97,204,700
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGEL2 angel homolog 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:130,453,912...130,476,383
Ensembl chr 9:130,453,920...130,474,921
JBrowse link
G BOLL boule homolog, RNA binding protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:101,535,392...101,602,232
Ensembl chr15:101,535,703...101,602,233
JBrowse link
G DAZL deleted in azoospermia like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:3,762,896...3,783,848 JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:71,207,141...71,245,863
Ensembl chr 2:71,207,124...71,248,916
JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:161,784,146...161,928,953
Ensembl chr 6:161,786,352...161,928,910
JBrowse link
G HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657) UniProt PMID:12456657 MGI:5306322 NCBI chr 2:139,779,865...139,783,016
Ensembl chr 2:139,779,867...139,783,159
JBrowse link
G HNRNPC heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) UniProt PMID:16010978 NCBI chr 7:77,921,098...77,978,550
Ensembl chr 7:77,921,141...77,969,914
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:67,314,651...67,365,060
Ensembl chr 9:67,314,484...67,365,061
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:22,976,951...22,979,568
Ensembl chr13:22,964,071...22,983,109
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chr 2:77,551,562...77,563,153
Ensembl chr 2:77,551,563...77,563,107
JBrowse link
G RBM10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367529|PMID:19508861) Ensembl
MGI
PMID:19508861 GO_REF:0000107 MGI:4367529 NCBI chr  X:41,773,232...41,803,656
Ensembl chr  X:41,773,232...41,803,662
JBrowse link
G RBM38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chr17:57,783,156...57,802,495
Ensembl chr17:57,783,154...57,797,997
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,852...71,227,704
JBrowse link
G TIRAP TIR domain containing adaptor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,374,559...53,394,172
Ensembl chr 9:53,375,642...53,394,165
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
conversion of ds siRNA to ss siRNA involved in RNA interference term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DICER1 dicer 1, ribonuclease III involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSDE1 cold shock domain containing E1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:105,804,512...105,845,735
Ensembl chr 4:105,804,586...105,845,725
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,093,667...124,185,352
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,633
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,475,270...17,497,130
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,196,969...25,243,272
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,137,639...36,227,690
JBrowse link
G PAIP1 poly(A) binding protein interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:28,098,580...28,134,296
Ensembl chr16:28,098,579...28,134,275
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,113...54,598,407
JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,789...168,736,604
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G DCP1A decapping mRNA 1A involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr13:35,392,592...35,455,639
Ensembl chr13:35,392,510...35,479,703
JBrowse link
G DCP1B decapping mRNA 1B involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 5:68,922,086...68,976,280
Ensembl chr 5:68,923,903...68,975,957
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,648
JBrowse link
G DCPS decapping enzyme, scavenger involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 9:53,400,750...53,437,161
Ensembl chr 9:53,400,753...53,437,548
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:48,348,653...48,360,004
Ensembl chr15:48,347,864...48,385,464
JBrowse link
G NOCT nocturnin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,412...87,909,655
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr11:5,487,019...5,614,458
Ensembl chr11:5,486,889...5,614,454
JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 2:11,826,816...11,857,699
Ensembl chr 2:11,827,799...11,857,699
JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:126,890,464...126,998,014
Ensembl chr 1:126,890,892...126,998,059
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCP1A decapping mRNA 1A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:35,392,592...35,455,639
Ensembl chr13:35,392,510...35,479,703
JBrowse link
G DCP1B decapping mRNA 1B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:68,922,086...68,976,280
Ensembl chr 5:68,923,903...68,975,957
JBrowse link
G EDC3 enhancer of mRNA decapping 3 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:58,828,693...58,895,475
Ensembl chr 7:58,828,726...58,897,923
JBrowse link
G EDC4 enhancer of mRNA decapping 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:28,489,427...28,501,511
Ensembl chr 6:28,489,422...28,501,512
JBrowse link
DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNMT1 DNA methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:68,981,564...69,040,364
Ensembl chr 2:68,981,564...69,029,919
JBrowse link
G DNMT3A DNA methyltransferase 3 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3768461|PMID:17938196)
(MGI:3611125|PMID:16322236)
Ensembl
MGI
PMID:16322236 PMID:17938196 GO_REF:0000107 MGI:3611125 MGI:3768461 NCBI chr 3:113,501,972...113,609,148
Ensembl chr 3:113,528,926...113,609,139
JBrowse link
G DNMT3B DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (MGI:3768461|PMID:17938196) MGI PMID:17938196 MGI:3768461 NCBI chr17:36,345,715...36,386,076
Ensembl chr17:36,332,801...36,386,074
JBrowse link
G HDAC1 histone deacetylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:88,749,611...88,785,220
Ensembl chr 6:88,749,634...88,785,412
JBrowse link
G HELLS helicase, lymphoid specific involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:105,923,727...105,967,003
Ensembl chr14:105,923,552...105,966,998
JBrowse link
G KMT2B lysine methyltransferase 2B acts_upstream_of_or_within ISO (MGI:4849597|PMID:20808952) MGI PMID:20808952 MGI:4849597 NCBI chr 6:45,146,863...45,166,854
Ensembl chr 6:45,146,846...45,166,852
JBrowse link
G MBD2 methyl-CpG binding domain protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:103,683,077...103,768,372
Ensembl chr 1:103,683,065...103,752,427
JBrowse link
G MBD3 methyl-CpG binding domain protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611125|PMID:16322236) Ensembl
MGI
PMID:16322236 GO_REF:0000107 MGI:3611125 NCBI chr 2:76,913,880...76,923,435
Ensembl chr 2:76,906,644...76,923,435
JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:3611125|PMID:16322236) MGI PMID:16322236 MGI:3611125 NCBI chr 2:69,717,175...69,810,301
Ensembl chr 2:69,662,238...69,810,298
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,131,236...78,202,518
Ensembl chr 2:78,124,269...78,202,535
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr16:68,329,785...68,352,020
Ensembl chr16:68,313,884...68,350,261
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,130
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,343...238,541,333
JBrowse link
G EXOSC5 exosome component 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:49,373,378...49,381,875
Ensembl chr 6:49,373,378...49,382,180
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:28,176,806...28,206,435
Ensembl chr13:28,176,787...28,208,935
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:12,817,081...12,825,847
Ensembl chr11:12,817,110...12,825,847
JBrowse link
G EXOSC9 exosome component 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:102,265,656...102,278,179
Ensembl chr 8:102,264,470...102,303,842
JBrowse link
gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AJUBA ajuba LIM protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20616046) MGI
Ensembl
PMID:20616046 GO_REF:0000107 NCBI chr 7:76,063,009...76,072,884
Ensembl chr 7:76,063,034...76,076,594
JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:20,271,593...20,372,300
Ensembl chr 6:20,271,596...20,372,280
JBrowse link
G EIF6 eukaryotic translation initiation factor 6 involved_in ISO (PMID:17507929) UniProt PMID:17507929 NCBI chr17:38,638,295...38,643,918
Ensembl chr17:38,609,945...38,643,932
JBrowse link
G LIMD1 LIM domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20616046) MGI
Ensembl
PMID:20616046 GO_REF:0000107 NCBI chr13:28,730,192...28,811,584
Ensembl chr13:28,730,260...28,811,616
JBrowse link
G MIR1 microRNA mir-1 acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:3510301 NCBI chr17:61,894,036...61,894,143
Ensembl chr17:61,894,036...61,894,143
JBrowse link
G MIR100 microRNA mir-100 acts_upstream_of_or_within ISO (MGI:4822296|PMID:20439489) MGI PMID:20439489 MGI:4822296 NCBI chr 9:49,157,909...49,157,988
Ensembl chr 9:49,157,909...49,157,988
JBrowse link
G MIR107 microRNA mir-107 acts_upstream_of_or_within ISO (MGI:5013695|PMID:21415270) MGI PMID:21415270 MGI:5013695 NCBI chr14:101,420,743...101,420,829
Ensembl chr14:101,420,743...101,420,829
JBrowse link
G MIR10A microRNA mir-10a acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:3510301 NCBI chr12:24,833,644...24,833,723
Ensembl chr12:24,833,627...24,833,730
JBrowse link
G MIR124A-1 microRNA mir-124a-1 acts_upstream_of_or_within ISO (MGI:3706460|PMID:17403776), (MGI:4438512|PMID:19898466), (MGI:5303045|PMID:21857657) MGI PMID:17403776 PMID:19898466 PMID:21857657 MGI:3706460 MGI:4438512 MGI:5303045 NCBI chr 4:69,968,854...69,968,958
Ensembl chr 4:69,968,854...69,968,958
JBrowse link
G MIR124A-2 microRNA mir-124a-2 acts_upstream_of_or_within ISO (MGI:3706460|PMID:17403776)
(MGI:3706460|PMID:17403776), (MGI:4438512|PMID:19898466), (MGI:5303045|PMID:21857657)
MGI PMID:17403776 PMID:19898466 PMID:21857657 MGI:3706460 MGI:4438512 MGI:5303045 NCBI chr14:13,201,425...13,201,509
Ensembl chr14:13,201,425...13,201,509
JBrowse link
G MIR125A microRNA mir-125a acts_upstream_of_or_within ISO (MGI:4438512|PMID:19898466) MGI PMID:19898466 MGI:4438512 NCBI chr 6:58,331,566...58,331,645
Ensembl chr 6:58,331,566...58,331,645
JBrowse link
G MIR125B-1 microRNA mir-125b-1 involved_in ISO (MGI:5882697|PMID:28281528) MGI PMID:28281528 MGI:5882697 NCBI chr 9:49,109,435...49,109,514
Ensembl chr 9:49,109,435...49,109,514
JBrowse link
G MIR133A-1 microRNA mir-133a-1 acts_upstream_of_or_within ISO (MGI:3820745|PMID:19015276) MGI PMID:19015276 MGI:3820745 NCBI chr17:61,904,781...61,904,883
Ensembl chr17:61,904,781...61,904,883
JBrowse link
G MIR133A-2 microRNA mir-133a-2 acts_upstream_of_or_within ISO (MGI:3820745|PMID:19015276) MGI PMID:19015276 MGI:3820745 NCBI chr 6:106,998,899...106,998,971
Ensembl chr 6:106,998,896...106,998,982
JBrowse link
G MIR137 microRNA mir-137 acts_upstream_of_or_within ISO (MGI:4822296|PMID:20439489) MGI PMID:20439489 MGI:4822296 NCBI chr 4:119,793,993...119,794,074
Ensembl chr 4:119,793,984...119,794,088
JBrowse link
G MIR155 microRNA mir-155 acts_upstream_of_or_within ISO (MGI:4833768|PMID:20548288) MGI PMID:20548288 MGI:4833768 NCBI chr13:189,138,822...189,138,902
Ensembl chr13:189,138,822...189,138,902
JBrowse link
G MIR17 microRNA mir-17 acts_upstream_of_or_within ISO (MGI:5140688|PMID:21338882) MGI PMID:21338882 MGI:5140688 NCBI chr11:60,734,656...60,734,732
Ensembl chr11:60,734,656...60,734,732
JBrowse link
G MIR183 microRNA mir-183 acts_upstream_of_or_within ISO (MGI:6108693|PMID:28819115) MGI PMID:28819115 MGI:6108693 NCBI chr18:18,982,269...18,982,338
Ensembl chr18:18,982,269...18,982,338
JBrowse link
G MIR196A-1 microRNA mir-196a-1 acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:3510301 NCBI chr12:24,886,316...24,886,395
Ensembl chr12:24,886,307...24,886,408
JBrowse link
G MIR196A-2 microRNA mir-196a-2 acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:3510301 NCBI chr 5:19,204,442...19,204,548
Ensembl chr 5:19,204,442...19,204,548
JBrowse link
G MIR205 microRNA mir-205 acts_upstream_of_or_within ISO (MGI:5514438|PMID:23974039) MGI PMID:23974039 MGI:5514438 NCBI chr 9:133,517,078...133,517,146
Ensembl chr 9:133,517,078...133,517,146
JBrowse link
G MIR21 microRNA mir-21 acts_upstream_of_or_within
involved_in
ISO (MGI:5693365|PMID:19147652)
(MGI:6208917|PMID:29925839)
MGI PMID:19147652 PMID:29925839 MGI:5693365 MGI:6208917 NCBI chr12:36,065,267...36,065,358
Ensembl chr12:36,065,267...36,065,358
JBrowse link
G MIR214 microRNA mir-214 acts_upstream_of_or_within ISO (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 9:114,527,992...114,528,101
Ensembl chr 9:114,527,990...114,528,101
JBrowse link
G MIR23A microRNA mir-23a acts_upstream_of_or_within ISO (MGI:5516374|PMID:24101522) MGI PMID:24101522 MGI:5516374 NCBI chr 2:65,308,117...65,308,186
Ensembl chr 2:65,308,117...65,308,186
JBrowse link
G MIR26A microRNA mir-26a acts_upstream_of_or_within ISO (MGI:5494382|PMID:22210897) MGI PMID:22210897 MGI:5494382 NCBI chr 5:23,112,744...23,112,827
Ensembl chr 5:23,112,744...23,112,827
JBrowse link
G MIR30A microRNA mir-30a acts_upstream_of_or_within ISO (MGI:3838679|PMID:19185580) MGI PMID:19185580 MGI:3838679 NCBI chr 1:51,412,827...51,412,933
Ensembl chr 1:51,412,827...51,412,933
JBrowse link
G MIR423 microRNA mir-423 involved_in ISO (MGI:5922106|PMID:28411267) MGI PMID:28411267 MGI:5922106 NCBI chr12:46,211,525...46,211,604
Ensembl chr12:46,211,525...46,211,611
JBrowse link
G MIR489 microRNA mir-489 acts_upstream_of_or_within ISO (MGI:5312165|PMID:22358842) MGI PMID:22358842 MGI:5312165 NCBI chr 9:73,330,690...73,330,770
Ensembl chr 9:73,330,690...73,330,770
JBrowse link
G MIR504 microRNA mir-504 involved_in ISO (MGI:5921469|PMID:26941017) MGI PMID:26941017 MGI:5921469 NCBI chr  X:113,495,281...113,495,360
Ensembl chr  X:113,495,281...113,495,360
JBrowse link
G MIR7-2 microRNA mir-7-2 acts_upstream_of_or_within ISO (MGI:4946569|PMID:21307095) MGI PMID:21307095 MGI:4946569 NCBI chr10:30,986,180...30,986,288
Ensembl chr10:30,986,180...30,986,288
JBrowse link
G MIR874 microRNA mir-874 acts_upstream_of_or_within ISO (MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:5551666 NCBI chr 2:139,660,118...139,660,201
Ensembl chr 2:139,660,118...139,660,201
JBrowse link
G MIR96 microRNA mir-96 acts_upstream_of_or_within ISO (MGI:6108693|PMID:28819115) MGI PMID:28819115 MGI:6108693 NCBI chr18:18,982,506...18,982,590
Ensembl chr18:18,982,506...18,982,590
JBrowse link
G MIRLET7A-1 microRNA let-7a-1 acts_upstream_of_or_within ISO (MGI:5461254|PMID:23152446) MGI PMID:23152446 MGI:5461254 NCBI chr 9:49,152,586...49,152,665
Ensembl chr 9:49,152,586...49,152,665
JBrowse link
G MIRLET7A-2 microRNA let-7a-2 acts_upstream_of_or_within ISO (MGI:4438512|PMID:19898466)
(MGI:5461254|PMID:23152446)
MGI PMID:19898466 PMID:23152446 MGI:4438512 MGI:5461254 NCBI chr 3:43,465,667...43,465,758
Ensembl chr 3:43,465,667...43,465,758
JBrowse link
G MIRLET7C microRNA let-7c acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:3510301 NCBI chr13:181,303,209...181,303,302
Ensembl chr13:181,303,209...181,303,302
JBrowse link
G MIRLET7E microRNA let-7e acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871), (MGI:4438512|PMID:19898466) MGI PMID:15361871 PMID:19898466 MGI:3510301 MGI:4438512 NCBI chr 6:58,332,042...58,332,121
Ensembl chr 6:58,332,036...58,332,120
JBrowse link
G MOV10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:17507929) UniProt PMID:17507929 NCBI chr 4:107,738,089...107,763,873
Ensembl chr 4:107,738,112...107,763,596
JBrowse link
G TNRC6A trinucleotide repeat containing adaptor 6A involved_in IBA (PMID:21873635) GO_Central PMID:21873635
G TNRC6B trinucleotide repeat containing adaptor 6B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:8,052,434...8,311,811
Ensembl chr 5:8,060,979...8,311,418
JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:3,847,522...3,939,054
Ensembl chr12:3,846,428...3,935,391
JBrowse link
G WTIP WT1 interacting protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:20616046) MGI
Ensembl
PMID:20616046 GO_REF:0000107 NCBI chr 6:44,150,875...44,178,378
Ensembl chr 6:44,150,092...44,190,547
JBrowse link
gene silencing by RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:92,038,104...92,076,477
Ensembl chr 6:92,036,834...92,215,149
JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:2,966,794...3,012,388
Ensembl chr 4:2,919,529...3,015,367
JBrowse link
G AGO3 argonaute RISC catalytic component 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:92,081,763...92,225,811
Ensembl chr 6:92,036,834...92,215,149
JBrowse link
G ASZ1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr18:28,859,140...28,910,927
Ensembl chr18:28,859,149...28,910,899
JBrowse link
G CNOT10 CCR4-NOT transcription complex subunit 10 involved_in IEA UniProt GO_REF:0000104 NCBI chr13:18,649,725...18,736,075
Ensembl chr13:18,649,746...18,736,075
JBrowse link
G CNOT11 CCR4-NOT transcription complex subunit 11 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:53,064,648...53,081,315
Ensembl chr 3:53,062,965...53,081,268
JBrowse link
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:78,131,236...78,202,518
Ensembl chr 2:78,124,269...78,202,535
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like involved_in IEA UniProt GO_REF:0000043 NCBI chr 8:73,191,721...73,335,779
Ensembl chr 8:73,185,999...73,335,741
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G DDX4 DEAD-box helicase 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:34,879,701...34,983,701
Ensembl chr16:34,858,368...34,983,699
JBrowse link
G ERI1 exoribonuclease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr15:56,091,790...56,123,520
Ensembl chr15:56,093,581...56,123,510
JBrowse link
G EXD1 exonuclease 3'-5' domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,112,461...130,153,485
Ensembl chr 1:130,112,845...130,153,480
JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:10,659,456...10,716,210
Ensembl chr 3:10,669,828...10,708,523
JBrowse link
G LIN28B lin-28 homolog B involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:71,173,291...71,296,131
Ensembl chr 1:71,166,786...71,296,861
JBrowse link
G MAEL maelstrom spermatogenic transposon silencer involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr 4:83,990,266...84,040,465
Ensembl chr 4:83,975,347...84,040,709
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,137,639...36,227,690
JBrowse link
G PIWIL1 piwi like RNA-mediated gene silencing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:24,729,346...24,760,056
Ensembl chr14:24,730,053...24,760,013
JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:6,560,402...6,632,524
Ensembl chr14:6,563,668...6,632,528
JBrowse link
G PIWIL3 piwi like RNA-mediated gene silencing 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr14:42,834,819...42,869,486 JBrowse link
G PIWIL4 piwi like RNA-mediated gene silencing 4 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:26,679,960...26,751,856
Ensembl chr 9:26,679,453...26,752,001
JBrowse link
G SND1 staphylococcal nuclease and tudor domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr18:20,261,473...20,653,621
Ensembl chr18:20,261,476...20,653,590
JBrowse link
G SRRT serrate, RNA effector molecule involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:8,717,782...8,731,204
Ensembl chr 3:8,717,785...8,731,201
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:18,718,588...18,723,843
Ensembl chr 5:18,718,158...18,723,843
JBrowse link
G TDRD1 tudor domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:124,526,013...124,575,166
Ensembl chr14:124,529,586...124,573,244
JBrowse link
G TDRD12 tudor domain containing 12 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:42,589,557...42,667,946
Ensembl chr 6:42,589,554...42,667,950
JBrowse link
G TDRD9 tudor domain containing 9 involved_in IEA UniProt GO_REF:0000043
G TNRC6B trinucleotide repeat containing adaptor 6B involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chr 5:8,052,434...8,311,811
Ensembl chr 5:8,060,979...8,311,418
JBrowse link
heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAHD1 bromo adjacent homology domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:130,849,835...130,874,735
Ensembl chr 1:130,849,835...130,878,321
JBrowse link
G BAZ2A bromodomain adjacent to zinc finger domain 2A acts_upstream_of_or_within ISO (MGI:3653583|PMID:16678107)
(MGI:4462332|PMID:20168299)
MGI PMID:16678107 PMID:20168299 MGI:3653583 MGI:4462332 NCBI chr 5:21,932,527...21,983,033
Ensembl chr 5:21,933,894...21,983,021
JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:52,586,089...52,596,154
Ensembl chr10:52,586,280...52,596,376
JBrowse link
G CBX3 chromobox 3 involved_in ISO (PMID:17540172) ComplexPortal PMID:17540172 NCBI chr18:46,193,138...46,205,114
Ensembl chr18:46,193,138...46,204,714
JBrowse link
G CTBP1 C-terminal binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:475,164...496,510
Ensembl chr 8:475,082...495,984
JBrowse link
G EED embryonic ectoderm development involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:20,123,077...20,158,747
Ensembl chr 9:20,123,857...20,158,816
JBrowse link
G EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO (MGI:3820717|PMID:19026781) ARUK-UCL PMID:19026781 MGI:3820717 NCBI chr12:20,107,744...20,139,764
Ensembl chr12:20,115,297...20,141,749
JBrowse link
G H2AFY H2A histone family, member Y involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:137,535,128...137,623,886
Ensembl chr 2:137,535,131...137,623,889
JBrowse link
G H2AFZ H2A histone family, member Z involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:120,563,752...120,566,023
Ensembl chr 8:120,563,752...120,566,034
JBrowse link
G HELLS helicase, lymphoid specific acts_upstream_of_or_within ISO (MGI:3510059|PMID:15448183) MGI PMID:15448183 MGI:3510059 NCBI chr14:105,923,727...105,967,003
Ensembl chr14:105,923,552...105,966,998
JBrowse link
G HMGA2 high mobility group AT-hook 2 involved_in ISO (PMID:16901784) UniProt PMID:16901784 NCBI chr 5:30,188,521...30,329,635 JBrowse link
G KMT2D lysine methyltransferase 2D involved_in ISO (MGI:4849597|PMID:20808952) UniProt PMID:20808952 MGI:4849597 NCBI chr 5:15,049,827...15,091,622 JBrowse link
G L3MBTL1 L3MBTL histone methyl-lysine binding protein 1 involved_in ISO (PMID:17540172) ComplexPortal PMID:17540172 NCBI chr17:46,135,567...46,176,967
Ensembl chr17:46,119,409...46,173,944
JBrowse link
G LOC100154071 histone H2A type 1-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:21,592,937...21,593,433 JBrowse link
G LOC100154181 histone H2A type 2-B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:99,168,195...99,168,679
Ensembl chr 4:99,168,255...99,168,647
JBrowse link
G LOC100155734 histone H2A type 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:20,863,594...20,864,115
Ensembl chr 7:20,789,769...20,867,386
JBrowse link
G LOC100157763 histone H2A type 1-H involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:21,582,735...21,583,552
Ensembl chr 7:21,226,552...21,232,705
JBrowse link
G LOC100158121 histone H2A type 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:20,857,026...20,858,357
Ensembl chr 7:21,632,862...21,936,037
JBrowse link
G LOC100510904 histone H1.0 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:10,038,944...10,041,242
Ensembl chr 5:10,038,951...10,041,080
JBrowse link
G LOC100512448 histone H2A.V involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:50,533,382...50,548,341
Ensembl chr18:50,533,429...50,556,439
JBrowse link
G LOC100520991 histone H2A-Bbd type 1-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:32,692,523...32,693,072 JBrowse link
G LOC100620620 histone H2A-Bbd type 2/3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:125,537,401...125,540,026 JBrowse link
G LOC100621538 histone H2A type 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:51,688,375...51,704,824
Ensembl chr 2:51,693,853...51,694,245
JBrowse link
G LOC100622387 histone H2A type 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:21,632,867...21,633,939
Ensembl chr 7:21,632,862...21,936,037
JBrowse link
G LOC100625850 histone H2A.J involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:57,777,008...57,777,673
Ensembl chr 5:57,777,010...57,777,654
JBrowse link
G LOC102159655 histone H2A type 2-A-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:99,197,499...99,198,164
Ensembl chr 4:99,197,661...99,198,053
JBrowse link
G LOC106510170 histone H2A type 2-C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:99,168,743...99,169,270
Ensembl chr 4:99,168,806...99,169,195
JBrowse link
G LOC110255320 lysine-specific demethylase 6A-like acts_upstream_of_or_within ISO (MGI:5305502|PMID:22192413) MGI PMID:22192413 MGI:5305502 NCBI chr  Y:8,937,949...9,087,971 JBrowse link
G MACROH2A2 macroH2A.2 histone involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:73,002,385...73,055,228
Ensembl chr14:73,003,117...73,055,226
JBrowse link
G MECP2 methyl-CpG binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3530434|PMID:15608638) MGI
Ensembl
PMID:15608638 GO_REF:0000107 MGI:3530434 NCBI chr  X:124,735,523...124,789,063
Ensembl chr  X:124,735,656...124,789,110
JBrowse link
G MORF4L1 mortality factor 4 like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:48,050,050...48,075,799
Ensembl chr 7:48,050,045...48,075,796
JBrowse link
G MORF4L2 mortality factor 4 like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:84,553,770...84,566,304
Ensembl chr  X:84,552,705...84,569,030
JBrowse link
G MSL3 MSL complex subunit 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:8,519,366...8,535,249
Ensembl chr  X:8,518,835...8,535,249
JBrowse link
G PCGF2 polycomb group ring finger 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:23,362,631...23,375,779
Ensembl chr12:23,362,654...23,375,775
JBrowse link
G POLE3 DNA polymerase epsilon 3, accessory subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:254,033,378...254,036,224 JBrowse link
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:37,485,601...37,536,159
Ensembl chr12:37,485,586...37,536,146
JBrowse link
G RB1 RB transcriptional corepressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:19,186,754...19,317,642
Ensembl chr11:19,186,759...19,317,690
JBrowse link
G RBBP4 RB binding protein 4, chromatin remodeling factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:88,987,092...89,006,815 JBrowse link
G RBBP7 RB binding protein 7, chromatin remodeling factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:13,293,278...13,317,074
Ensembl chr  X:13,280,977...13,317,079
JBrowse link
G SIRT1 sirtuin 1 involved_in ISO (PMID:15469825) BHF-UCL PMID:15469825 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,157...71,123,299
JBrowse link
G SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (MGI:3653583|PMID:16678107) ComplexPortal PMID:16678107 MGI:3653583 NCBI chr 8:84,184,572...84,224,943
Ensembl chr 8:84,184,575...84,224,871
JBrowse link
G TNP1 transition protein 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr15:119,037,492...119,038,099
Ensembl chr15:119,037,496...119,038,105
JBrowse link
G UBR2 ubiquitin protein ligase E3 component n-recognin 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:37,655,808...37,785,301
Ensembl chr 7:37,655,847...37,784,359
JBrowse link
heterochromatin assembly by small RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM172A family with sequence similarity 172 member A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:100,477,770...100,893,594
Ensembl chr 2:100,477,775...100,893,580
JBrowse link
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:112,039,949...112,090,632
Ensembl chr 7:112,038,234...112,090,511
JBrowse link
G TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:157,495,075...157,522,349
Ensembl chr13:157,497,562...157,504,418
JBrowse link
G ZNFX1 zinc finger NFX1-type containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:50,925,789...50,958,722
Ensembl chr17:50,925,789...50,958,705
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 9:36,620,656...36,759,555
Ensembl chr 9:36,620,658...36,759,554
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,648
JBrowse link
G ERI1 exoribonuclease 1 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr15:56,091,790...56,123,520
Ensembl chr15:56,093,581...56,123,510
JBrowse link
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
G EXOSC4 exosome component 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:618,993...621,336
Ensembl chr 4:618,988...621,343
JBrowse link
G MTPAP mitochondrial poly(A) polymerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:40,764,098...40,869,608
Ensembl chr10:40,764,362...40,872,854
JBrowse link
G TENT2 terminal nucleotidyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:88,328,250...88,388,242
Ensembl chr 2:88,254,320...88,502,342
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 6:34,603,157...34,669,779
Ensembl chr 6:34,597,636...34,759,216
JBrowse link
G TUT1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 2:9,148,563...9,161,918 JBrowse link
G TUT4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 6:159,655,658...159,794,450
Ensembl chr 6:159,655,627...159,793,758
JBrowse link
G TUT7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr10:28,995,564...29,061,179
Ensembl chr10:28,995,565...29,061,176
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,015...59,013,495
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:83,063,810...83,174,497
Ensembl chr13:83,065,934...83,174,537
JBrowse link
inactivation of X chromosome by heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:103,809,732...103,986,057
Ensembl chr 6:103,808,066...103,986,144
JBrowse link
inhibition of cysteine-type endopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAST calpastatin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:103,255,738...103,378,623
Ensembl chr 2:103,255,630...103,378,623
JBrowse link
G CST7 cystatin F involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5904382|PMID:28251676)
GO_Central
MGI
PMID:21873635 PMID:28251676 MGI:5904382 NCBI chr17:30,758,000...30,766,472
Ensembl chr17:30,758,009...30,766,608
JBrowse link
G LOC641352 caspase-15 involved_in ISO (PMID:11821383) UniProt PMID:11821383 NCBI chr13:24,046,127...24,068,431 JBrowse link
G XIAP X-linked inhibitor of apoptosis involved_in ISO (PMID:11865055) UniProt PMID:11865055 NCBI chr  X:101,399,374...101,440,021
Ensembl chr  X:101,399,898...101,440,022
JBrowse link
inhibition of cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L12 BCL2 like 12 involved_in ISO (PMID:22262180) UniProt PMID:22262180 NCBI chr 6:54,706,453...54,715,127
Ensembl chr 6:54,707,237...54,715,127
JBrowse link
G FCMR Fc mu receptor acts_upstream_of_or_within ISO (MGI:3576402|PMID:15632112) MGI PMID:15632112 MGI:3576402 NCBI chr 9:67,530,944...67,546,441
Ensembl chr 9:67,532,083...67,546,403
JBrowse link
G LOC100523672 heat shock factor protein 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,808,658...27,818,256
Ensembl chr 6:27,808,652...27,813,404
Ensembl chr 6:27,808,652...27,813,404
JBrowse link
G XIAP X-linked inhibitor of apoptosis acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2681362|PMID:14623868) MGI
Ensembl
PMID:14623868 GO_REF:0000107 MGI:2681362 NCBI chr  X:101,399,374...101,440,021
Ensembl chr  X:101,399,898...101,440,022
JBrowse link
miRNA loading onto RISC involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23622242) MGI
Ensembl
PMID:23622242 GO_REF:0000107 NCBI chr 4:95,154,230...95,197,308
Ensembl chr 4:95,154,358...95,197,305
JBrowse link
G AGO1 argonaute RISC component 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:92,038,104...92,076,477
Ensembl chr 6:92,036,834...92,215,149
JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:2,966,794...3,012,388
Ensembl chr 4:2,919,529...3,015,367
JBrowse link
G AGO3 argonaute RISC catalytic component 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:92,081,763...92,225,811
Ensembl chr 6:92,036,834...92,215,149
JBrowse link
G AGO4 argonaute RISC component 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:91,967,499...92,013,030
Ensembl chr 6:91,973,119...92,012,990
JBrowse link
G DICER1 dicer 1, ribonuclease III involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
G PRKRA protein activator of interferon induced protein kinase EIF2AK2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:84,134,273...84,156,596
Ensembl chr15:84,133,679...84,156,508
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex involved_in IEA UniProt GO_REF:0000104 NCBI chr 5:18,718,588...18,723,843
Ensembl chr 5:18,718,158...18,723,843
JBrowse link
miRNA-mediated gene silencing by inhibition of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 involved_in IEA UniProt
Ensembl
GO_REF:0000104 GO_REF:0000107 NCBI chr 6:92,038,104...92,076,477
Ensembl chr 6:92,036,834...92,215,149
JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chr 4:2,966,794...3,012,388
Ensembl chr 4:2,919,529...3,015,367
JBrowse link
G AGO3 argonaute RISC catalytic component 3 involved_in IEA UniProt
Ensembl
GO_REF:0000104 GO_REF:0000107 NCBI chr 6:92,081,763...92,225,811
Ensembl chr 6:92,036,834...92,215,149
JBrowse link
G AGO4 argonaute RISC component 4 involved_in IEA UniProt GO_REF:0000104 NCBI chr 6:91,967,499...92,013,030
Ensembl chr 6:91,973,119...92,012,990
JBrowse link
G EIF6 eukaryotic translation initiation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:38,638,295...38,643,918
Ensembl chr17:38,609,945...38,643,932
JBrowse link
G MIR125A microRNA mir-125a acts_upstream_of_or_within ISO (MGI:5465045|PMID:22751012) MGI PMID:22751012 MGI:5465045 NCBI chr 6:58,331,566...58,331,645
Ensembl chr 6:58,331,566...58,331,645
JBrowse link
G MIR135-1 microRNA mir-135-1 acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:6402838 NCBI chr13:34,441,079...34,441,168
Ensembl chr13:34,441,079...34,441,168
JBrowse link
G MIR143 microRNA mir-143 acts_upstream_of_or_within ISO (MGI:5289772|PMID:21441927) MGI PMID:21441927 MGI:5289772 NCBI chr 2:150,578,738...150,578,817
Ensembl chr 2:150,578,738...150,578,817
JBrowse link
G MIR186 microRNA mir-186 acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:6402838 NCBI chr 6:141,943,328...141,943,409
Ensembl chr 6:141,943,328...141,943,409
JBrowse link
G MIR9-1 microRNA mir-9-1 acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:6402838 NCBI chr 4:93,660,422...93,660,510 JBrowse link
G MIRLET7G microRNA let-7g acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) MGI PMID:32109384 MGI:6402838 NCBI chr13:34,406,140...34,406,219
Ensembl chr13:34,406,130...34,406,225
JBrowse link
G TNRC6A trinucleotide repeat containing adaptor 6A involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107
G TNRC6B trinucleotide repeat containing adaptor 6B involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:8,052,434...8,311,811
Ensembl chr 5:8,060,979...8,311,418
JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C involved_in IEA InterPro GO_REF:0000002 NCBI chr12:3,847,522...3,939,054
Ensembl chr12:3,846,428...3,935,391
JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:18,762,043...18,835,788
Ensembl chr13:18,761,445...18,830,563
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
miRNA-mediated gene silencing by mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 6:92,038,104...92,076,477
Ensembl chr 6:92,036,834...92,215,149
JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IEA UniProt
Ensembl
GO_REF:0000104 GO_REF:0000107 NCBI chr 4:2,966,794...3,012,388
Ensembl chr 4:2,919,529...3,015,367
JBrowse link
G AGO4 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 6:91,967,499...92,013,030
Ensembl chr 6:91,973,119...92,012,990
JBrowse link
G MIR196A-1 microRNA mir-196a-1 acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) MGI PMID:15105502 PMID:15361871 MGI:3042528 MGI:3510301 NCBI chr12:24,886,316...24,886,395
Ensembl chr12:24,886,307...24,886,408
JBrowse link
G MIR196A-2 microRNA mir-196a-2 acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) MGI PMID:15105502 PMID:15361871 MGI:3042528 MGI:3510301 NCBI chr 5:19,204,442...19,204,548
Ensembl chr 5:19,204,442...19,204,548
JBrowse link
G MOV10 Mov10 RISC complex RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:107,738,089...107,763,873
Ensembl chr 4:107,738,112...107,763,596
JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:39,395,517...39,402,653
Ensembl chr13:39,395,541...39,402,650
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
JBrowse link
G SUPV3L1 Suv3 like RNA helicase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:72,245,526...72,272,948
Ensembl chr14:72,245,600...72,277,049
JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO4 argonaute RISC component 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:91,967,499...92,013,030
Ensembl chr 6:91,973,119...92,012,990
JBrowse link
G CNOT10 CCR4-NOT transcription complex subunit 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:18,649,725...18,736,075
Ensembl chr13:18,649,746...18,736,075
JBrowse link
G CNOT11 CCR4-NOT transcription complex subunit 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:53,064,648...53,081,315
Ensembl chr 3:53,062,965...53,081,268
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA UniProt GO_REF:0000117 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in IEA UniProt GO_REF:0000117 NCBI chr16:68,329,785...68,352,020
Ensembl chr16:68,313,884...68,350,261
JBrowse link
G CNOT9 CCR4-NOT transcription complex subunit 9 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:120,590,354...120,622,203
Ensembl chr15:120,590,641...120,669,825
JBrowse link
G DCP2 decapping mRNA 2 involved_in ISO (PMID:21070968), (PMID:28002401)
(MGI:4849882|PMID:21070968)
UniProt PMID:21070968 PMID:28002401 MGI:4849882 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,648
JBrowse link
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:132,540,784...132,902,943
Ensembl chr15:132,540,558...132,959,793
JBrowse link
G DXO decapping exoribonuclease involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,057,670...24,060,108
Ensembl chr 7:24,050,397...24,059,997
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5439239|PMID:22844247) Ensembl
MGI
PMID:22844247 GO_REF:0000107 MGI:5439239 NCBI chr 2:72,656,951...72,668,854
Ensembl chr 2:72,656,951...72,668,964
JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12515382) MGI
Ensembl
PMID:12515382 GO_REF:0000107 NCBI chr 7:23,900,385...23,908,523
Ensembl chr 7:23,900,395...23,908,490
JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr18:40,752,390...40,755,909
Ensembl chr18:40,752,452...40,756,438
JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr 8:82,409,170...82,428,501
Ensembl chr 8:82,409,181...82,428,416
JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:105,019,539...105,053,603
Ensembl chr 8:105,015,420...105,053,563
JBrowse link
G METTL16 methyltransferase 16, N6-methyladenosine involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,337
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:28637692 PMID:28792938 PMID:28965759 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,948
JBrowse link
G MIRLET7C microRNA let-7c acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr13:181,303,209...181,303,302
Ensembl chr13:181,303,209...181,303,302
JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:52,218,889...52,219,834
Ensembl chr 6:52,219,418...52,219,834
JBrowse link
G NUDT12 nudix hydrolase 12 involved_in ISO (MGI:6368680|PMID:31101919) UniProt PMID:31101919 MGI:6368680 NCBI chr 2:109,044,946...109,059,721
Ensembl chr 2:109,044,948...109,059,624
JBrowse link
G NUDT16 nudix hydrolase 16 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:1,125,180...1,128,036
Ensembl chr13:1,122,541...1,128,041
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:28,616,808...28,802,506
Ensembl chr 3:28,612,269...28,802,505
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:85,595,356...85,639,665
Ensembl chr 3:85,595,392...85,639,690
JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:38,656,270...38,665,863
Ensembl chr 4:38,656,319...38,670,999
JBrowse link
G SLFN14 schlafen family member 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:39,947,791...39,962,823
Ensembl chr12:39,950,505...39,964,565
JBrowse link
G SND1 staphylococcal nuclease and tudor domain containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:20,261,473...20,653,621
Ensembl chr18:20,261,476...20,653,590
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:85,717,147...85,756,750
Ensembl chr 6:85,716,917...85,751,583
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5567042|PMID:24415781)
GO_Central
MGI
PMID:21873635 PMID:24415781 MGI:5567042 NCBI chr 1:16,463,532...16,498,974
Ensembl chr 1:16,465,252...16,498,971
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:10330172), (PMID:20221403)
(PMID:10751406), (PMID:11782475)
UniProt
MGI
PMID:10330172 PMID:10751406 PMID:11782475 PMID:20221403 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 acts_upstream_of_or_within ISO PMID:10751406 MGI PMID:10751406 RGD:1580602 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,011...92,495,574
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISO (MGI:5320815|PMID:22367205) UniProt PMID:22367205 MGI:5320815 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,406...97,204,700
JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:49288|PMID:1370712) Ensembl
MGI
PMID:1370712 GO_REF:0000107 MGI:49288 NCBI chr 4:16,374,900...16,553,859
Ensembl chr 4:16,374,900...16,553,012
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF1 CUGBP Elav-like family member 1 involved_in ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr 2:15,066,518...15,161,478
Ensembl chr 2:15,066,537...15,187,797
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr 8:73,191,721...73,335,779
Ensembl chr 8:73,185,999...73,335,741
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:31,177,112...31,564,674
Ensembl chr 6:31,174,569...31,564,707
JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:133,180,638...133,313,307
Ensembl chr15:133,180,663...133,313,320
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 6:81,203,067...81,239,823
Ensembl chr 6:81,184,833...81,239,135
JBrowse link
G METTL14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:105,019,539...105,053,603
Ensembl chr 8:105,015,420...105,053,563
JBrowse link
G METTL16 methyltransferase 16, N6-methyladenosine involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,337
JBrowse link
G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 More... MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,948
JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:87,546,388...87,687,483
Ensembl chr 6:87,547,320...87,687,442
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chr 7:13,126,518...13,139,504 JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:38,656,270...38,665,863
Ensembl chr 4:38,656,319...38,670,999
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:106,163,899...106,314,998
Ensembl chr 6:106,163,903...106,314,944
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr 3:125,353,063...125,493,368
Ensembl chr 3:125,353,119...125,491,963
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:62,329,302...62,341,312
Ensembl chr17:62,329,302...62,341,509
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 6:85,717,147...85,756,750
Ensembl chr 6:85,716,917...85,751,583
JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein 3 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 4:70,887,101...70,928,839
Ensembl chr 4:70,887,103...70,928,808
JBrowse link
mRNA destabilization-mediated gene silencing by siRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 6:92,038,104...92,076,477
Ensembl chr 6:92,036,834...92,215,149
JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:2,966,794...3,012,388
Ensembl chr 4:2,919,529...3,015,367
JBrowse link
G AGO4 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 6:91,967,499...92,013,030
Ensembl chr 6:91,973,119...92,012,990
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3057047|PMID:15480992) Ensembl
MGI
PMID:15480992 GO_REF:0000107 MGI:3057047 NCBI chr 5:62,811,819...62,820,532
Ensembl chr 5:62,810,879...62,820,173
JBrowse link
G AXIN2 axin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:12,311,293...12,343,207
Ensembl chr12:12,311,293...12,343,200
JBrowse link
G CIRBP cold inducible RNA binding protein involved_in ISO (PMID:11574538) UniProt PMID:11574538 NCBI chr 2:77,185,295...77,194,373
Ensembl chr 2:77,047,910...77,200,559
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:142,384,526...142,387,407
Ensembl chr 2:142,384,532...142,387,199
JBrowse link
G E2F1 E2F transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:37,178,587...37,190,118
Ensembl chr17:37,178,598...37,189,841
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:48,156,835...48,204,701
Ensembl chr14:48,156,727...48,204,926
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within
ISO (PMID:19029303)
(PMID:21613615)
(PMID:31358969)
(MGI:5559905|PMID:24394384)
(MGI:5922838|PMID:27609837)
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615)
UniProt
MGI
CACAO
PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 More... MGI:3037407 MGI:5287957 MGI:5559905 MGI:5922838 NCBI chr 2:71,207,141...71,245,863
Ensembl chr 2:71,207,124...71,248,916
JBrowse link
G FUS FUS RNA binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:27378374) MGI
Ensembl
PMID:27378374 GO_REF:0000107 NCBI chr 3:17,314,936...17,326,663
Ensembl chr 3:17,314,332...17,326,637
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,936,602...22,965,929
Ensembl chr16:22,936,601...22,965,886
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:15192077 RGD:1357938 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,633
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:17174306) UniProt PMID:17174306 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,475,270...17,497,130
JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:67,123,055...67,147,991
Ensembl chr 9:67,123,265...67,147,992
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:68,390,879...68,451,605
Ensembl chr16:68,390,875...68,484,918
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO (MGI:2158083|PMID:11741878) MGI PMID:11741878 MGI:2158083 NCBI chr 9:67,314,651...67,365,060
Ensembl chr 9:67,314,484...67,365,061
JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:18,652,582...18,663,227
Ensembl chr12:18,652,493...18,671,909
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21073857 RGD:10040969 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G NOCT nocturnin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,412...87,909,655
JBrowse link
G QKI QKI, KH domain containing RNA binding ISO RGD PMID:16855020 RGD:10045995 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,513...4,883,768
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chr 7:13,126,518...13,139,504 JBrowse link
G RBM46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (MGI:5644240|PMID:25397698) MGI PMID:25397698 MGI:5644240 NCBI chr 8:74,337,324...74,383,044
Ensembl chr 8:74,311,884...74,382,516
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:85148|PMID:9009318) Ensembl
MGI
PMID:9009318 GO_REF:0000107 MGI:85148 NCBI chr15:120,434,100...120,446,396
Ensembl chr15:120,433,952...120,446,396
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in ISO (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chr12:34,278,363...34,282,164
Ensembl chr12:34,272,068...34,282,137
JBrowse link
G TAF15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:27378374) MGI
Ensembl
PMID:27378374 GO_REF:0000107 NCBI chr12:39,687,171...39,716,761
Ensembl chr12:39,686,884...39,724,769
JBrowse link
G TENT5A terminal nucleotidyltransferase 5A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:84,545,033...84,552,138
Ensembl chr 1:84,545,201...84,552,135
JBrowse link
G TENT5B terminal nucleotidyltransferase 5B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:84,303,495...84,310,957
Ensembl chr 6:84,304,395...84,310,733
JBrowse link
G TENT5C terminal nucleotidyltransferase 5C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:103,131,819...103,154,074
Ensembl chr 4:103,131,821...103,161,899
JBrowse link
G TENT5D terminal nucleotidyltransferase 5D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:64,120,229...64,122,912
Ensembl chr  X:64,120,248...64,121,420
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:92,350,021...92,412,335
Ensembl chr 6:92,350,073...92,412,330
JBrowse link
G TRAF2 TNF receptor associated factor 2 involved_in IEA Ensembl GO_REF:0000107
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:77,483,997...77,541,557
Ensembl chr 1:77,480,926...77,541,210
JBrowse link
G TRAF5 TNF receptor associated factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:131,772,810...131,822,555
Ensembl chr 9:131,775,447...131,822,530
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chr 7:38,746,393...38,762,282
Ensembl chr 7:38,746,052...38,761,038
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:13,611,786...13,620,250
Ensembl chr 1:13,611,311...13,620,269
JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:31358969) UniProt PMID:31358969 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,789...168,736,604
JBrowse link
G YBX2 Y-box binding protein 2 acts_upstream_of_or_within ISO (MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:3696301 NCBI chr12:52,635,383...52,642,443
Ensembl chr12:52,635,383...52,641,651
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL16 methyltransferase 16, N6-methyladenosine involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:48,491,254...48,567,253
Ensembl chr12:48,499,240...48,561,337
JBrowse link
negative regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPINK5 serine peptidase inhibitor Kazal type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:149,309,482...149,382,286
Ensembl chr 2:149,251,308...149,382,282
JBrowse link
negative regulation of chemokine (C-C motif) ligand 4 production term browser