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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of gene expression
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Accession:GO:0010629 term browser browse the term
Definition:Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
Comment:This term covers any process that negatively regulates the rate of production of a mature gene product, and so includes processes that negatively regulate that rate by reducing the level, stability or availability of intermediates in the process of gene expression. For example, it covers any process that reduces the level, stability or availability of mRNA or circRNA for translation and thereby reduces the rate of production of the encoded protein via translation.
Synonyms:related_synonym: gene silencing



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negative regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 2700046G09Rik RIKEN cDNA 2700046G09 gene acts_upstream_of_or_within IGI (MGI:5516374|PMID:24101522) MGI PMID:24101522 MGI:5516374 NCBI chr19:32,389,216...32,391,184
Ensembl chr19:32,389,216...32,391,190
JBrowse link
G Abcc2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr19:43,782,308...43,838,332
Ensembl chr19:43,782,192...43,840,740
JBrowse link
G Acacb acetyl-Coenzyme A carboxylase beta involved_in IMP (MGI:3629477|PMID:12920182) UniProt PMID:12920182 MGI:3629477 NCBI chr 5:114,146,321...114,250,761
Ensembl chr 5:114,146,535...114,250,761
JBrowse link
G Ace angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 involved_in IMP (MGI:5607357|PMID:25017399) BHF-UCL PMID:25017399 MGI:5607357 NCBI chr11:105,967,948...105,989,964
Ensembl chr11:105,967,945...105,989,964
JBrowse link
G Acvr1b activin A receptor, type 1B acts_upstream_of_or_within IMP (MGI:5461254|PMID:23152446) MGI PMID:23152446 MGI:5461254 NCBI chr15:101,174,072...101,213,684
Ensembl chr15:101,174,067...101,213,684
JBrowse link
G Acvrl1 activin A receptor, type II-like 1 involved_in IMP (MGI:2674189|PMID:12941632) BHF-UCL PMID:12941632 MGI:2674189 NCBI chr15:101,128,522...101,145,336
Ensembl chr15:101,128,522...101,145,336
JBrowse link
G Adam10 a disintegrin and metallopeptidase domain 10 acts_upstream_of_or_within ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:70,678,944...70,780,229
Ensembl chr 9:70,678,997...70,780,229
JBrowse link
G Adipor2 adiponectin receptor 2 involved_in ISO RGD
MGI
PMID:29237572 GO_REF:0000096 MGI:4417868 RGD:24922203 NCBI chr 6:119,353,150...119,417,699
Ensembl chr 6:119,353,150...119,417,704
JBrowse link
G Adnp activity-dependent neuroprotective protein involved_in ISO p53 RGD
MGI
PMID:15314252 GO_REF:0000096 MGI:4417868 RGD:2312780 NCBI chr 2:168,180,965...168,207,112
Ensembl chr 2:168,180,986...168,207,112
JBrowse link
G Aff2 AF4/FMR2 family, member 2 acts_upstream_of_or_within IMP (MGI:5496978|PMID:23562910) MGI PMID:23562910 MGI:5496978 NCBI chr  X:69,360,190...69,872,054
Ensembl chr  X:69,360,294...69,868,037
JBrowse link
G Agt angiotensinogen (serpin peptidase inhibitor, clade A, member 8) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:124,556,587...124,569,706
Ensembl chr 8:124,556,534...124,569,706
JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in ISO 10 proteins, including ADAM3 RGD
MGI
PMID:16157606 GO_REF:0000096 MGI:4417868 RGD:2313017 NCBI chr17:35,170,986...35,176,083
Ensembl chr17:35,170,991...35,176,068
JBrowse link
G Akirin2 akirin 2 involved_in ISO MKP-1 RGD
MGI
PMID:18460465 GO_REF:0000096 MGI:4417868 RGD:2306009 NCBI chr 4:34,550,615...34,566,965
Ensembl chr 4:34,550,937...34,566,908
JBrowse link
G Akt1 thymoma viral proto-oncogene 1 involved_in IDA (MGI:4881905|PMID:19933931) BHF-UCL PMID:19933931 MGI:4881905 NCBI chr12:112,653,821...112,674,884
Ensembl chr12:112,653,821...112,674,884
JBrowse link
G Anapc2 anaphase promoting complex subunit 2 involved_in ISO Ppfia1 RGD
MGI
PMID:17419996 GO_REF:0000096 MGI:4417868 RGD:14696670 NCBI chr 2:25,272,466...25,285,916
Ensembl chr 2:25,272,478...25,285,915
JBrowse link
G Anxa7 annexin A7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:20,455,261...20,480,133
Ensembl chr14:20,455,260...20,480,133
JBrowse link
G Apln apelin involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:48,025,146...48,034,853
Ensembl chr  X:48,025,146...48,034,853
JBrowse link
G Aplnr apelin receptor acts_upstream_of IMP (MGI:5584055|PMID:23603510) BHF-UCL PMID:23603510 MGI:5584055 NCBI chr 2:85,136,360...85,139,923
Ensembl chr 2:85,136,225...85,139,923
JBrowse link
G Apoe apolipoprotein E involved_in IMP (MGI:6148510|PMID:18377911) ARUK-UCL PMID:18377911 MGI:6148510 NCBI chr 7:19,696,244...19,701,310
Ensembl chr 7:19,696,109...19,699,188
JBrowse link
G App amyloid beta (A4) precursor protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:84,952,666...85,175,255
Ensembl chr16:84,949,685...85,173,766
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:72,206,174...72,235,780
Ensembl chr 6:72,206,177...72,235,577
JBrowse link
G Atp2b4 ATPase, Ca++ transporting, plasma membrane 4 involved_in IMP
ISO
(MGI:6368228|PMID:25147342) ARUK-UCL
MGI
PMID:25147342 GO_REF:0000096 MGI:4834177 MGI:6368228 NCBI chr 1:133,702,674...133,801,059
Ensembl chr 1:133,699,457...133,801,041
JBrowse link
G Aurka aurora kinase A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:172,356,190...172,370,886
Ensembl chr 2:172,356,190...172,370,535
JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within IDA (MGI:3804621|PMID:18076571) MGI PMID:18076571 MGI:3804621 NCBI chr17:26,131,217...26,195,811
Ensembl chr17:26,138,688...26,195,811
JBrowse link
G Bak1 BCL2-antagonist/killer 1 involved_in ISO p16, cyclin D1, COX 2 RGD
MGI
PMID:18349538 GO_REF:0000096 MGI:4417868 RGD:2316126 NCBI chr17:27,019,812...27,028,627
Ensembl chr17:27,019,810...27,029,009
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 (human) acts_upstream_of_or_within IMP (MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) MGI PMID:18317593 PMID:19150989 MGI:3794515 MGI:3836843 NCBI chr 8:94,067,952...94,099,369
Ensembl chr 8:94,067,954...94,098,928
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 (human) acts_upstream_of_or_within IMP (MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) MGI PMID:18317593 PMID:19150989 MGI:3794515 MGI:3836843 NCBI chr 9:59,321,966...59,353,508
Ensembl chr 9:59,321,990...59,353,508
JBrowse link
G Bcl11a B cell CLL/lymphoma 11A (zinc finger protein) acts_upstream_of_or_within IMP (MGI:4355757|PMID:19657335) MGI PMID:19657335 MGI:4355757 NCBI chr11:24,076,564...24,173,558
Ensembl chr11:24,078,056...24,174,123
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
ISO
IDA
(MGI:3512872|PMID:15322112) MGI PMID:15322112 GO_REF:0000096 MGI:3512872 MGI:4834177 NCBI chr 2:133,552,159...133,562,896
Ensembl chr 2:133,552,159...133,562,885
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
ISO
IDA
(MGI:2135612|PMID:11493558) MGI PMID:11493558 GO_REF:0000096 MGI:2135612 MGI:4834177 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link
G Bmpr1a bone morphogenetic protein receptor, type 1A acts_upstream_of_or_within IMP (MGI:2175930|PMID:11854453) BHF-UCL PMID:11854453 MGI:2175930 NCBI chr14:34,411,061...34,503,336
Ensembl chr14:34,410,734...34,503,341
JBrowse link
G Brip1 BRCA1 interacting protein C-terminal helicase 1 involved_in ISO RGD
MGI
PMID:12511571 GO_REF:0000096 MGI:4417868 RGD:11251702 NCBI chr11:86,058,136...86,201,215
Ensembl chr11:86,058,138...86,201,193
JBrowse link
G C1qtnf3 C1q and tumor necrosis factor related protein 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:10,952,119...10,980,162
Ensembl chr15:10,952,332...10,980,150
JBrowse link
G Ccdc3 coiled-coil domain containing 3 involved_in
acts_upstream_of_or_within
IBA
IMP
ISO
(MGI:6201960|PMID:21873635)
(MGI:6108413|PMID:28827783)
GO_Central
MGI
PMID:21873635 PMID:28827783 GO_REF:0000096 MGI:4834177 MGI:6108413 MGI:6201960 NCBI chr 2:5,137,311...5,235,967
Ensembl chr 2:5,137,776...5,230,878
JBrowse link
G Ccl3 chemokine (C-C motif) ligand 3 involved_in ISO (PMID:21403648) UniProt PMID:21403648 NCBI chr11:83,647,843...83,649,378
Ensembl chr11:83,647,844...83,649,355
JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within IMP (MGI:4413658|PMID:18597638) MGI PMID:18597638 MGI:4413658 NCBI chr10:24,595,442...24,598,683
Ensembl chr10:24,595,442...24,598,683
JBrowse link
G Ccnb1 cyclin B1 involved_in ISO c-mos RGD
MGI
PMID:15291744 GO_REF:0000096 MGI:4417868 RGD:1578405 NCBI chr13:100,778,739...100,786,486
Ensembl chr13:100,778,650...100,786,570
JBrowse link
G Ccr1 chemokine (C-C motif) receptor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:123,962,126...123,968,692
Ensembl chr 9:123,962,124...123,968,692
JBrowse link
G Ccr1l1 chemokine (C-C motif) receptor 1-like 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:123,976,430...123,986,715
Ensembl chr 9:123,977,243...123,978,408
JBrowse link
G Cd28 CD28 antigen involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:60,746,388...60,773,359
Ensembl chr 1:60,716,800...60,773,359
JBrowse link
G Cd34 CD34 antigen involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:194,938,821...194,961,292
Ensembl chr 1:194,938,819...194,961,279
JBrowse link
G Cd36 CD36 molecule involved_in IMP (MGI:4850200|PMID:20978343) BHF-UCL PMID:20978343 MGI:4850200 NCBI chr 5:17,781,690...17,888,959
Ensembl chr 5:17,781,690...17,888,801
JBrowse link
G Cd3e CD3 antigen, epsilon polypeptide involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:44,998,735...45,009,663
Ensembl chr 9:44,998,740...45,009,627
JBrowse link
G Cd46 CD46 antigen, complement regulatory protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:195,038,971...195,098,784
Ensembl chr 1:195,036,826...195,092,249
JBrowse link
G Cdk1 cyclin-dependent kinase 1 acts_upstream_of_or_within ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:69,335,146...69,352,912
Ensembl chr10:69,335,146...69,352,938
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A (P21) acts_upstream_of_or_within IMP (MGI:3617096|PMID:11981756) MGI PMID:11981756 MGI:3617096 NCBI chr17:29,090,979...29,100,722
Ensembl chr17:29,090,976...29,100,727
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 acts_upstream_of_or_within ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:90,940,259...91,019,497
Ensembl chr 2:90,940,382...91,019,497
JBrowse link
G Chd4 chromodomain helicase DNA binding protein 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:125,095,980...125,130,591
Ensembl chr 6:125,095,981...125,130,591
JBrowse link
G Chmp1a charged multivesicular body protein 1A acts_upstream_of_or_within ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:123,204,261...123,212,788
Ensembl chr 8:123,204,264...123,212,763
JBrowse link
G Cilp cartilage intermediate layer protein, nucleotide pyrophosphohydrolase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:65,265,180...65,280,614
Ensembl chr 9:65,265,180...65,280,605
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 MGI:4834177 NCBI chr10:17,723,228...17,725,674
Ensembl chr10:17,723,218...17,725,674
JBrowse link
G Cldn19 claudin 19 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:119,255,441...119,262,438
Ensembl chr 4:119,255,414...119,262,438
JBrowse link
G Cldn3 claudin 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:134,986,214...134,987,476
Ensembl chr 5:134,986,214...134,987,472
JBrowse link
G Cldn5 claudin 5 involved_in IMP
ISO
(MGI:6369916|PMID:30734065) ARUK-UCL
MGI
PMID:30734065 GO_REF:0000096 MGI:4834177 MGI:6369916 NCBI chr16:18,776,847...18,778,262
Ensembl chr16:18,776,847...18,778,262
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:40,492,538...40,515,847
Ensembl chr 8:40,492,540...40,515,847
JBrowse link
G Cnpy2 canopy FGF signaling regulator 2 acts_upstream_of IMP (MGI:5427047|PMID:22378787) BHF-UCL PMID:22378787 MGI:5427047 NCBI chr10:128,322,158...128,327,187
Ensembl chr10:128,322,459...128,327,553
JBrowse link
G Cpne1 copine I involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:156,071,841...156,111,965
Ensembl chr 2:156,071,842...156,111,965
JBrowse link
G Creb1 cAMP responsive element binding protein 1 involved_in ISO RGD
MGI
PMID:21816899 GO_REF:0000096 MGI:4417868 RGD:10059418 NCBI chr 1:64,532,794...64,604,548
Ensembl chr 1:64,532,645...64,604,548
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:91,982,328...92,024,170
Ensembl chr 2:91,982,328...92,024,502
JBrowse link
G Crh corticotropin releasing hormone involved_in ISO Lhb RGD
MGI
PMID:20663987 GO_REF:0000096 MGI:4417868 RGD:5508201 NCBI chr 3:19,693,401...19,695,396
Ensembl chr 3:19,693,401...19,695,396
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 involved_in ISO Lhb, Fshb RGD
MGI
PMID:19193717 GO_REF:0000096 MGI:4417868 RGD:2317015 NCBI chr 6:55,090,048...55,133,016
Ensembl chr 6:55,090,049...55,133,016
JBrowse link
G Crkl v-crk avian sarcoma virus CT10 oncogene homolog-like involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:17,451,985...17,487,440
Ensembl chr16:17,451,987...17,487,434
JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within IMP (MGI:3758141|PMID:17893660) MGI PMID:17893660 MGI:3758141 NCBI chr17:31,677,931...31,681,730
Ensembl chr17:31,677,807...31,681,733
JBrowse link
G Cryab crystallin, alpha B acts_upstream_of_or_within IMP (MGI:3758141|PMID:17893660) MGI PMID:17893660 MGI:3758141 NCBI chr 9:50,745,951...50,756,636
Ensembl chr 9:50,751,325...50,756,636
JBrowse link
G Ctcf CCCTC-binding factor involved_in IMP (MGI:3852297|PMID:18614575) UniProt PMID:18614575 MGI:3852297 NCBI chr 8:105,636,474...105,682,922
Ensembl chr 8:105,636,568...105,682,922
JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 involved_in IMP
ISO
(MGI:3836885|PMID:19122665) ParkinsonsUK-UCL
MGI
PMID:19122665 GO_REF:0000096 MGI:3836885 MGI:4417868 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G Cxcl15 chemokine (C-X-C motif) ligand 15 acts_upstream_of_or_within ISO (PMID:29048659) ARUK-UCL PMID:29048659 NCBI chr 5:90,794,534...90,803,067
Ensembl chr 5:90,794,534...90,803,067
JBrowse link
G Daxx Fas death domain-associated protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:33,909,404...33,915,590
Ensembl chr17:33,909,414...33,915,590
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:130,654,033...130,664,654
Ensembl chr 2:130,653,960...130,664,659
JBrowse link
G Dgkq diacylglycerol kinase, theta involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:108,647,044...108,660,830
Ensembl chr 5:108,646,693...108,669,672
JBrowse link
G Dicer1 dicer 1, ribonuclease type III involved_in
acts_upstream_of
ISO (PMID:23322395) ARUK-UCL
MGI
PMID:23322395 GO_REF:0000096 MGI:4834177 NCBI chr12:104,687,740...104,751,968
Ensembl chr12:104,687,742...104,751,952
JBrowse link
G Dip2a disco interacting protein 2 homolog A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:76,263,034...76,345,360
Ensembl chr10:76,259,429...76,345,291
JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:119,325,784...119,335,666
Ensembl chr 2:119,325,784...119,335,962
JBrowse link
G Dmrt1i Dmrt1 interacting ncRNA acts_upstream_of_or_within IDA (MGI:4837785|PMID:20816665) MGI PMID:20816665 MGI:4837785 NCBI chr 5:144,357,923...144,361,005
Ensembl chr 5:144,357,923...144,361,048
JBrowse link
G Dnmt1 DNA methyltransferase (cytosine-5) 1 involved_in
acts_upstream_of_or_within
ISO
IMP
(MGI:6270117|PMID:29117290) MGI PMID:29117290 GO_REF:0000096 MGI:4834177 MGI:6270117 NCBI chr 9:20,907,206...20,959,888
Ensembl chr 9:20,907,209...20,959,888
JBrowse link
G Dysf dysferlin acts_upstream_of_or_within IMP (MGI:3775586|PMID:18276788) MGI PMID:18276788 MGI:3775586 NCBI chr 6:84,008,361...84,211,060
Ensembl chr 6:84,008,590...84,211,060
JBrowse link
G Edn1 endothelin 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr13:42,301,476...42,307,990
Ensembl chr13:42,301,476...42,307,990
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within IMP (MGI:5478659|PMID:23152784) MGI PMID:23152784 MGI:5478659 NCBI chr 6:70,844,484...70,905,241
Ensembl chr 6:70,844,515...70,905,245
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 involved_in ISO Arc RGD
MGI
PMID:17632064 GO_REF:0000096 MGI:4417868 RGD:10044262 NCBI chr11:119,288,363...119,300,043
Ensembl chr11:119,288,363...119,300,089
JBrowse link
G Eif4a3l1 eukaryotic translation initiation factor 4A3 like 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:136,327,539...136,329,983
Ensembl chr 6:136,327,539...136,329,983
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in IMP (MGI:5605894|PMID:25056700) BHF-UCL PMID:25056700 MGI:5605894 NCBI chr 5:30,913,387...30,921,279
Ensembl chr 5:30,913,402...30,921,277
JBrowse link
G Eng endoglin involved_in IMP (MGI:2674189|PMID:12941632) BHF-UCL PMID:12941632 MGI:2674189 NCBI chr 2:32,646,595...32,682,669
Ensembl chr 2:32,646,595...32,682,669
JBrowse link
G Epm2a epilepsy, progressive myoclonic epilepsy, type 2 gene alpha acts_upstream_of_or_within IMP (MGI:3826692|PMID:18824542) MGI PMID:18824542 MGI:3826692 NCBI chr10:11,342,691...11,459,664
Ensembl chr10:11,343,404...11,459,644
JBrowse link
G Erp29 endoplasmic reticulum protein 29 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:121,444,753...121,452,474
Ensembl chr 5:121,428,590...121,452,506
JBrowse link
G Esr1 estrogen receptor 1 (alpha) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:4,611,989...5,005,633
Ensembl chr10:4,611,593...5,005,614
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit involved_in ISO Cdkn1c, also known as p57kip2, cyclin-dependent kinase inhibitor 1c RGD
MGI
PMID:22821416 GO_REF:0000096 MGI:4417868 RGD:7242953 NCBI chr 6:47,530,274...47,595,270
Ensembl chr 6:47,530,139...47,595,341
JBrowse link
G Fbxw7 F-box and WD-40 domain protein 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:84,814,990...84,979,198
Ensembl chr 3:84,815,268...84,979,198
JBrowse link
G Fermt1 fermitin family member 1 involved_in IMP (MGI:5571208|PMID:24681597) CAFA PMID:24681597 MGI:5571208 NCBI chr 2:132,904,177...132,946,036
Ensembl chr 2:132,904,389...132,945,906
JBrowse link
G Fgf15 fibroblast growth factor 15 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:144,896,532...144,900,953
Ensembl chr 7:144,896,531...144,900,953
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within IGI
IMP
(MGI:5548021|PMID:24259513)
(MGI:3775898|PMID:18191119)
MGI PMID:18191119 PMID:24259513 MGI:3775898 MGI:5548021 NCBI chr 8:25,518,759...25,575,718
Ensembl chr 8:25,513,654...25,575,718
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within IMP (MGI:4437389|PMID:20053668) MGI PMID:20053668 MGI:4437389 NCBI chr 5:33,721,724...33,737,068
Ensembl chr 5:33,721,674...33,737,068
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within IGI (MGI:5548021|PMID:24259513) MGI PMID:24259513 MGI:5548021 NCBI chr13:55,152,818...55,168,759
Ensembl chr13:55,152,640...55,168,759
JBrowse link
G Flcn folliculin involved_in IMP (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chr11:59,791,408...59,810,039
Ensembl chr11:59,791,408...59,810,016
JBrowse link
G Flot2 flotillin 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:78,037,931...78,060,434
Ensembl chr11:78,037,931...78,060,434
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in IMP
ISO
(MGI:5473740|PMID:23235829) UniProt
MGI
RGD
PMID:23235829 PMID:24338128 GO_REF:0000096 MGI:4417868 MGI:5473740 RGD:11667958 NCBI chr  X:68,678,536...68,717,963
Ensembl chr  X:68,678,541...68,717,963
JBrowse link
G Foxo1 forkhead box O1 involved_in ISO (PMID:24280217) AgBase PMID:24280217 NCBI chr 3:52,268,337...52,350,109
Ensembl chr 3:52,268,336...52,353,221
JBrowse link
G Foxp1 forkhead box P1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:98,925,342...99,522,746
Ensembl chr 6:98,925,338...99,522,721
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within IDA (MGI:5569680|PMID:24501220) MGI PMID:24501220 MGI:5569680 NCBI chr  X:7,579,676...7,595,243
Ensembl chr  X:7,573,644...7,595,245
JBrowse link
G Fyn Fyn proto-oncogene involved_in IMP (MGI:4850200|PMID:20978343) BHF-UCL PMID:20978343 MGI:4850200 NCBI chr10:39,369,743...39,565,381
Ensembl chr10:39,368,855...39,565,381
JBrowse link
G Gas2l1 growth arrest-specific 2 like 1 involved_in ISO
ISS
(MGI:5306571|PMID:19375645) MGI
UniProt
PMID:19375645 GO_REF:0000096 MGI:4834177 MGI:5306571 NCBI chr11:5,054,131...5,065,348
Ensembl chr11:5,054,132...5,065,327
JBrowse link
G Gata2 GATA binding protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:88,193,891...88,207,032
Ensembl chr 6:88,193,891...88,207,032
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within IMP (MGI:3708031|PMID:17357106) MGI PMID:17357106 MGI:3708031 NCBI chr 2:9,857,078...9,887,953
Ensembl chr 2:9,857,078...9,890,034
JBrowse link
G Gata4 GATA binding protein 4 involved_in IDA (MGI:5780531|PMID:25590961) BHF-UCL PMID:25590961 MGI:5780531 NCBI chr14:63,198,914...63,271,712
Ensembl chr14:63,198,922...63,271,692
JBrowse link
G Gata5 GATA binding protein 5 involved_in IMP (MGI:5286818|PMID:21633169) BHF-UCL PMID:21633169 MGI:5286818 NCBI chr 2:180,325,088...180,335,503
Ensembl chr 2:180,325,133...180,334,699
JBrowse link
G Ggnbp2 gametogenetin binding protein 2 acts_upstream_of_or_within IMP
IDA
(MGI:5779255|PMID:26764350) MGI PMID:26764350 MGI:5779255 NCBI chr11:84,832,361...84,870,837
Ensembl chr11:84,832,361...84,870,817
JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within IMP (MGI:3849919|PMID:19439426) MGI PMID:19439426 MGI:3849919 NCBI chr10:56,377,300...56,390,419
Ensembl chr10:56,377,330...56,402,513
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 MGI:4834177 NCBI chr 5:139,423,150...139,427,800
Ensembl chr 5:139,423,151...139,427,800
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:38,089,001...38,246,084
Ensembl chr16:38,089,001...38,246,084
JBrowse link
G H19 H19, imprinted maternally expressed transcript acts_upstream_of_or_within IMP
IDA
(MGI:4365869|PMID:19762426) MGI PMID:19762426 MGI:4365869 NCBI chr 7:142,575,530...142,578,146
Ensembl chr 7:142,575,529...142,578,143
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:57,320,983...57,324,517
Ensembl chr 8:57,320,983...57,324,633
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:46,454,931...46,481,255
Ensembl chr11:46,454,935...46,481,255
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:129,516,104...129,542,646
Ensembl chr 4:129,516,104...129,542,713
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within IMP (MGI:5569711|PMID:23926128) MGI PMID:23926128 MGI:5569711 NCBI chr11:102,195,747...102,230,172
Ensembl chr11:102,194,432...102,230,166
JBrowse link
G Hdac8 histone deacetylase 8 involved_in ISO Stx1a RGD
MGI
PMID:28559304 GO_REF:0000096 MGI:4417868 RGD:13208603 NCBI chr  X:102,284,638...102,505,381
Ensembl chr  X:102,284,639...102,505,359
JBrowse link
G Hes1 hes family bHLH transcription factor 1 involved_in ISO RGD
MGI
PMID:19670267 GO_REF:0000096 MGI:4417868 RGD:9685170 NCBI chr16:30,065,357...30,067,796
Ensembl chr16:30,064,384...30,067,796
JBrowse link
G Hey1 hairy/enhancer-of-split related with YRPW motif 1 acts_upstream_of_or_within
involved_in
IMP
IDA
(MGI:5427763|PMID:22615585)
(MGI:3604167|PMID:16025100)
MGI
BHF-UCL
PMID:16025100 PMID:22615585 MGI:3604167 MGI:5427763 NCBI chr 3:8,663,359...8,667,038
Ensembl chr 3:8,663,359...8,667,256
JBrowse link
G Hey2 hairy/enhancer-of-split related with YRPW motif 2 involved_in
acts_upstream_of_or_within
IMP (MGI:3604167|PMID:16025100)
(MGI:5427763|PMID:22615585)
(MGI:4454633|PMID:20382855)
BHF-UCL
MGI
PMID:16025100 PMID:20382855 PMID:22615585 MGI:3604167 MGI:4454633 MGI:5427763 NCBI chr10:30,832,359...30,842,783
Ensembl chr10:30,832,359...30,842,801
JBrowse link
G Heyl hairy/enhancer-of-split related with YRPW motif-like acts_upstream_of_or_within IMP (MGI:5427763|PMID:22615585) MGI PMID:22615585 MGI:5427763 NCBI chr 4:123,233,556...123,249,870
Ensembl chr 4:123,233,556...123,249,875
JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:73,901,324...73,947,554
Ensembl chr12:73,901,375...73,947,530
JBrowse link
G Hinfp histone H4 transcription factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:44,292,438...44,305,716
Ensembl chr 9:44,292,440...44,305,671
JBrowse link
G Hmgb2 high mobility group box 2 involved_in IDA (MGI:5490149|PMID:23495099) AgBase PMID:23495099 MGI:5490149 NCBI chr 8:57,511,843...57,515,999
Ensembl chr 8:57,511,907...57,515,999
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO Mmp9 RGD
MGI
PMID:16683234 GO_REF:0000096 MGI:4417868 RGD:10042976 NCBI chr 5:99,955,935...99,979,130
Ensembl chr 5:99,955,935...99,978,938
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K involved_in ISO Orm1 RGD
MGI
PMID:9553145 GO_REF:0000096 MGI:4417868 RGD:2303817 NCBI chr13:58,391,132...58,403,343
Ensembl chr13:58,391,142...58,403,343
JBrowse link
G Hras Harvey rat sarcoma virus oncogene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:141,189,934...141,194,019
Ensembl chr 7:141,189,105...141,194,005
JBrowse link
G Hsf1 heat shock factor 1 involved_in ISO Igf2r RGD
MGI
PMID:24786827 GO_REF:0000096 MGI:4417868 RGD:10402547 NCBI chr15:76,477,362...76,501,155
Ensembl chr15:76,477,422...76,501,913
JBrowse link
G Hspa4 heat shock protein 4 involved_in ISO Tnf, Il1b, Icam1, Nos2 RGD
MGI
PMID:17473852 GO_REF:0000096 MGI:4417868 RGD:5688754 NCBI chr11:53,259,814...53,300,479
Ensembl chr11:53,259,814...53,300,457
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within IMP (MGI:4453908|PMID:20231428) MGI PMID:20231428 MGI:4453908 NCBI chr 2:152,736,251...152,737,410
Ensembl chr 2:152,736,251...152,737,410
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IMP
ISO
(MGI:4412240|PMID:18474814)
p21
UniProt
MGI
RGD
PMID:11706002 PMID:18474814 GO_REF:0000096 MGI:4412240 MGI:4417868 RGD:619536 NCBI chr12:25,093,799...25,096,092
Ensembl chr12:25,093,799...25,097,140
JBrowse link
G Id3 inhibitor of DNA binding 3 acts_upstream_of_or_within IDA (MGI:5512805|PMID:23523789) MGI PMID:23523789 MGI:5512805 NCBI chr 4:136,143,822...136,145,392
Ensembl chr 4:136,143,497...136,145,755
JBrowse link
G Ifng interferon gamma involved_in IDA
ISO
(MGI:6304699|PMID:29061364) ARUK-UCL
MGI
PMID:29061364 GO_REF:0000096 MGI:4834177 MGI:6304699 NCBI chr10:118,441,046...118,445,894
Ensembl chr10:118,441,046...118,445,892
JBrowse link
G Igf1 insulin-like growth factor 1 involved_in IDA
ISO
(MGI:4881905|PMID:19933931) BHF-UCL
MGI
PMID:19933931 GO_REF:0000096 MGI:4834177 MGI:4881905 NCBI chr10:87,858,265...87,937,047
Ensembl chr10:87,858,265...87,937,042
JBrowse link
G Il1b interleukin 1 beta involved_in ISO Nr2e1 RGD
MGI
PMID:23168994 GO_REF:0000096 MGI:4417868 RGD:7175538 NCBI chr 2:129,364,569...129,371,164
Ensembl chr 2:129,364,570...129,371,139
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 acts_upstream_of_or_within IMP (MGI:3528799|PMID:15654325) MGI PMID:15654325 MGI:3528799 NCBI chr 7:101,822,632...101,838,226
Ensembl chr 7:101,822,632...101,838,229
JBrowse link
G Ins2 insulin II acts_upstream_of ISO (PMID:31501273) ARUK-UCL PMID:31501273 NCBI chr 7:142,678,656...142,679,726
Ensembl chr 7:142,678,656...142,743,381
JBrowse link
G Insr insulin receptor involved_in ISO SOCS3 levels in hypothalamus RGD
MGI
PMID:17585961 GO_REF:0000096 MGI:4417868 RGD:2290473 NCBI chr 8:3,150,922...3,279,649
Ensembl chr 8:3,122,061...3,279,617
JBrowse link
G Iqgap3 IQ motif containing GTPase activating protein 3 acts_upstream_of_or_within IMP (MGI:3835718|PMID:18604197) MGI PMID:18604197 MGI:3835718 NCBI chr 3:88,082,002...88,121,048
Ensembl chr 3:88,081,971...88,121,048
JBrowse link
G Itgb8 integrin beta 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:119,162,803...119,238,276
Ensembl chr12:119,158,022...119,238,802
JBrowse link
G Jmjd4 jumonji domain containing 4 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:59,450,032...59,462,971
Ensembl chr11:59,450,045...59,458,567
JBrowse link
G Kantr Kdm5c adjacent non-coding transcript acts_upstream_of_or_within IMP (MGI:5648760|PMID:26034286) MGI PMID:26034286 MGI:5648760 NCBI chr  X:152,294,824...152,327,493
Ensembl chr  X:152,294,828...152,327,495
JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 acts_upstream_of_or_within IMP (MGI:3054495|PMID:15340049) MGI PMID:15340049 MGI:3054495 NCBI chr 7:143,106,877...143,427,050
Ensembl chr 7:143,106,362...143,427,042
JBrowse link
G Kdm2a lysine (K)-specific demethylase 2A acts_upstream_of_or_within IMP (MGI:5615026|PMID:25463925) MGI PMID:25463925 MGI:5615026 NCBI chr19:4,316,144...4,398,721
Ensembl chr19:4,314,419...4,398,285
JBrowse link
G Kdm4a lysine (K)-specific demethylase 4A involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:118,136,957...118,180,090
Ensembl chr 4:118,136,957...118,180,043
JBrowse link
G Kdr kinase insert domain protein receptor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:75,932,827...75,979,072
Ensembl chr 5:75,932,827...75,978,458
JBrowse link
G Keap1 kelch-like ECH-associated protein 1 involved_in ISO NQO1 RGD
MGI
PMID:11439354 PMID:20026152 GO_REF:0000096 MGI:4417868 RGD:6902900 RGD:727319 NCBI chr 9:21,229,730...21,239,332
Ensembl chr 9:21,229,730...21,239,361
JBrowse link
G Klf4 Kruppel-like factor 4 (gut) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:55,527,137...55,532,475
Ensembl chr 4:55,527,143...55,532,466
JBrowse link
G Kpna7 karyopherin alpha 7 (importin alpha 8) acts_upstream_of_or_within IMP (MGI:5913752|PMID:20699224) MGI PMID:20699224 MGI:5913752 NCBI chr 5:144,983,727...145,009,636
Ensembl chr 5:144,983,519...145,084,030
JBrowse link
G L3mbtl2 L3MBTL2 polycomb repressive complex 1 subunit acts_upstream_of_or_within IMP (MGI:5700289|PMID:22770845) MGI PMID:22770845 MGI:5700289 NCBI chr15:81,663,889...81,688,315
Ensembl chr15:81,663,889...81,688,315
JBrowse link
G Ldlr low density lipoprotein receptor involved_in IMP (MGI:5659826|PMID:24255059) BHF-UCL PMID:24255059 MGI:5659826 NCBI chr 9:21,723,576...21,749,919
Ensembl chr 9:21,723,483...21,749,919
JBrowse link
G Lgals9 lectin, galactose binding, soluble 9 involved_in IMP (MGI:5491117|PMID:23408620) UniProt PMID:23408620 MGI:5491117 NCBI chr11:78,962,979...78,984,924
Ensembl chr11:78,962,974...78,984,946
JBrowse link
G Lgmn legumain involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:102,394,082...102,439,728
Ensembl chr12:102,394,084...102,439,813
JBrowse link
G Lrp1 low density lipoprotein receptor-related protein 1 involved_in IMP (MGI:6434720|PMID:31023188) BHF-UCL PMID:31023188 MGI:6434720 NCBI chr10:127,538,157...127,621,148
Ensembl chr10:127,538,161...127,621,148
JBrowse link
G Lrp3 low density lipoprotein receptor-related protein 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:35,200,878...35,217,392
Ensembl chr 7:35,200,027...35,215,498
JBrowse link
G Mael maelstrom spermatogenic transposon silencer acts_upstream_of_or_within IMP (MGI:3813746|PMID:18694567) MGI PMID:18694567 MGI:3813746 NCBI chr 1:166,201,385...166,238,744
Ensembl chr 1:166,201,201...166,238,747
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:64,185,769...64,253,605
Ensembl chr 9:64,185,770...64,253,631
JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:81,105,913...81,124,697
Ensembl chr10:81,105,915...81,133,975
JBrowse link
G Mapt microtubule-associated protein tau involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:104,229,409...104,332,090
Ensembl chr11:104,231,390...104,332,090
JBrowse link
G Mark1 MAP/microtubule affinity regulating kinase 1 acts_upstream_of ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:184,896,424...184,999,954
Ensembl chr 1:184,896,789...184,999,570
JBrowse link
G Max Max protein involved_in ISO RGD
MGI
PMID:7791753 GO_REF:0000096 MGI:4417868 RGD:2316831 NCBI chr12:76,937,269...76,962,323
Ensembl chr12:76,937,269...76,962,201
JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 involved_in ISO Gfap RGD
MGI
PMID:16881068 GO_REF:0000096 MGI:4417868 RGD:9588644 NCBI chr18:74,267,605...74,282,737
Ensembl chr18:74,267,605...74,282,732
JBrowse link
G Mdm2 transformed mouse 3T3 cell double minute 2 involved_in ISO p53 RGD
MGI
PMID:19850968 GO_REF:0000096 MGI:4417868 RGD:2317361 NCBI chr10:117,688,875...117,710,758
Ensembl chr10:117,688,875...117,710,758
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in ISO Bdnf MGI
RGD
PMID:19217433 GO_REF:0000096 MGI:4417868 MGI:4834177 RGD:11069822 NCBI chr  X:74,026,592...74,085,690
Ensembl chr  X:74,026,592...74,135,363
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in IMP (MGI:3830899|PMID:16680724) UniProt PMID:16680724 MGI:3830899 NCBI chr13:83,504,017...83,667,079
Ensembl chr13:83,504,034...83,667,080
JBrowse link
G Met met proto-oncogene acts_upstream_of_or_within IMP (MGI:5529574|PMID:23994610) MGI PMID:23994610 MGI:5529574 NCBI chr 6:17,463,349...17,573,980
Ensembl chr 6:17,463,800...17,573,980
JBrowse link
G Mif macrophage migration inhibitory factor (glycosylation-inhibiting factor) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:75,859,353...75,860,277
Ensembl chr10:75,859,353...75,860,240
JBrowse link
G Mir124-2hg Mir124-2 host gene (non-protein coding) acts_upstream_of_or_within IDA
IMP
(MGI:5528923|PMID:23946534) MGI PMID:23946534 MGI:5528923 NCBI chr 3:17,789,921...17,800,071
Ensembl chr 3:17,789,921...17,808,970
JBrowse link
G Mir124a-1hg Mir124-1 host gene (non-protein coding) acts_upstream_of_or_within IDA
IMP
(MGI:5528923|PMID:23946534) MGI PMID:23946534 MGI:5528923 NCBI chr14:64,588,115...64,593,961
Ensembl chr14:64,587,331...64,593,961
JBrowse link
G Mir129 microRNA 129 acts_upstream_of_or_within IMP (MGI:5514289|PMID:23836929) MGI PMID:23836929 MGI:5514289
G Mir129-2 microRNA 129-2 acts_upstream_of_or_within IDA (MGI:5468417|PMID:22684256) MGI PMID:22684256 MGI:5468417 NCBI chr 2:94,241,364...94,241,453
Ensembl chr 2:94,241,364...94,241,453
JBrowse link
G Mir133a-1 microRNA 133a-1 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr18:10,782,909...10,782,976
Ensembl chr18:10,782,909...10,782,976
JBrowse link
G Mir133a-1hg Mir133a-1, Mir1b and Mir1a-2 host gene involved_in IDA (MGI:6159438|PMID:29606596) MGI PMID:29606596 MGI:6159438 NCBI chr18:10,778,306...10,791,393
Ensembl chr18:10,781,723...10,785,883
JBrowse link
G Mir133a-2 microRNA 133a-2 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 2:180,398,379...180,398,482
Ensembl chr 2:180,398,379...180,398,482
JBrowse link
G Mir134 microRNA 134 acts_upstream_of_or_within IDA (MGI:3822253|PMID:18806776) MGI PMID:18806776 MGI:3822253 NCBI chr12:109,734,139...109,734,209
Ensembl chr12:109,734,139...109,734,209
JBrowse link
G Mir135a-1 microRNA 135a-1 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 9:106,154,124...106,154,213
Ensembl chr 9:106,154,124...106,154,213
JBrowse link
G Mir135a-2 microRNA 135a-2 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr10:92,072,086...92,072,185
Ensembl chr10:92,072,086...92,072,185
JBrowse link
G Mir137 microRNA 137 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 3:118,433,857...118,433,929
Ensembl chr 3:118,433,857...118,433,929
JBrowse link
G Mir140 microRNA 140 acts_upstream_of_or_within IDA (MGI:5574156|PMID:24349493) MGI PMID:24349493 MGI:5574156 NCBI chr 8:107,551,244...107,551,313
Ensembl chr 8:107,551,244...107,551,313
JBrowse link
G Mir154 microRNA 154 acts_upstream_of_or_within IDA (MGI:5705446|PMID:25959411) MGI PMID:25959411 MGI:5705446 NCBI chr12:109,738,433...109,738,498
Ensembl chr12:109,738,433...109,738,498
JBrowse link
G Mir155 microRNA 155 acts_upstream_of_or_within IMP (MGI:5426073|PMID:22517757) MGI PMID:22517757 MGI:5426073 NCBI chr16:84,714,140...84,714,204
Ensembl chr16:84,714,140...84,714,204
JBrowse link
G Mir15a microRNA 15a acts_upstream_of_or_within IDA (MGI:3844748|PMID:19416898) MGI PMID:19416898 MGI:3844748 NCBI chr14:61,632,027...61,632,110
Ensembl chr14:61,632,027...61,632,110
JBrowse link
G Mir18 microRNA 18 acts_upstream_of_or_within IDA (MGI:5461254|PMID:23152446) MGI PMID:23152446 MGI:5461254 NCBI chr14:115,043,851...115,043,946
Ensembl chr14:115,043,851...115,043,946
JBrowse link
G Mir181b-1 microRNA 181b-1 acts_upstream_of_or_within IDA (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 1:137,966,639...137,966,718
Ensembl chr 1:137,966,639...137,966,718
JBrowse link
G Mir181b-2 microRNA 181b-2 acts_upstream_of_or_within IDA (MGI:3817382|PMID:18762567) MGI PMID:18762567 MGI:3817382 NCBI chr 2:38,853,830...38,853,918
Ensembl chr 2:38,853,830...38,853,918
JBrowse link
G Mir186 microRNA 186 acts_upstream_of_or_within IMP (MGI:5771621|PMID:26710318) MGI PMID:26710318 MGI:5771621 NCBI chr 3:157,544,279...157,544,349
Ensembl chr 3:157,544,279...157,544,349
JBrowse link
G Mir196a-1 microRNA 196a-1 acts_upstream_of_or_within IDA (MGI:3042528|PMID:15105502) MGI PMID:15105502 MGI:3042528 NCBI chr11:96,265,164...96,265,265
Ensembl chr11:96,265,164...96,265,265
JBrowse link
G Mir196a-2 microRNA 196a-2 acts_upstream_of_or_within IDA (MGI:3042528|PMID:15105502) MGI PMID:15105502 MGI:3042528 NCBI chr15:102,973,350...102,973,434
Ensembl chr15:102,973,350...102,973,434
JBrowse link
G Mir196b microRNA 196b acts_upstream_of_or_within IDA (MGI:3042528|PMID:15105502) MGI PMID:15105502 MGI:3042528 NCBI chr 6:52,230,081...52,230,165
Ensembl chr 6:52,230,081...52,230,165
JBrowse link
G Mir1a-1 microRNA 1a-1 acts_upstream_of_or_within IMP (MGI:5052204|PMID:21690310) MGI PMID:21690310 MGI:5052204 NCBI chr 2:180,389,048...180,389,124
Ensembl chr 2:180,389,048...180,389,124
JBrowse link
G Mir1a-2 microRNA 1a-2 acts_upstream_of_or_within IMP (MGI:5052204|PMID:21690310) MGI PMID:21690310 MGI:5052204 NCBI chr18:10,785,481...10,785,552
Ensembl chr18:10,785,481...10,785,552
JBrowse link
G Mir1b microRNA 1b acts_upstream_of_or_within IMP (MGI:5052204|PMID:21690310) MGI PMID:21690310 MGI:5052204 NCBI chr18:10,785,446...10,785,567
Ensembl chr18:10,785,446...10,785,567
JBrowse link
G Mir204 microRNA 204 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr19:22,750,605...22,750,672
Ensembl chr19:22,750,605...22,750,672
JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 1:193,507,463...193,507,530
Ensembl chr 1:193,507,463...193,507,530
JBrowse link
G Mir208b microRNA 208b acts_upstream_of_or_within IDA (MGI:4359539|PMID:19726871) MGI PMID:19726871 MGI:4359539 NCBI chr14:54,975,700...54,975,776
Ensembl chr14:54,975,700...54,975,776
JBrowse link
G Mir217 microRNA 217 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr11:28,763,728...28,763,835
Ensembl chr11:28,763,728...28,763,835
JBrowse link
G Mir218 microRNA 218 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854
G Mir218-1 microRNA 218-1 acts_upstream_of_or_within IDA
IMP
(MGI:5297649|PMID:20947829) MGI PMID:20947829 MGI:5297649 NCBI chr 5:48,223,942...48,224,051
Ensembl chr 5:48,223,942...48,224,051
JBrowse link
G Mir218-2 microRNA 218-2 acts_upstream_of_or_within IDA
IMP
(MGI:5297649|PMID:20947829) MGI PMID:20947829 MGI:5297649 NCBI chr11:35,616,816...35,616,925
Ensembl chr11:35,616,816...35,616,925
JBrowse link
G Mir219a-1 microRNA 219a-1 acts_upstream_of_or_within IDA (MGI:4439416|PMID:20223197) MGI PMID:20223197 MGI:4439416 NCBI chr17:34,024,983...34,025,092
Ensembl chr17:34,024,983...34,025,092
JBrowse link
G Mir219a-2 microRNA 219a-2 acts_upstream_of_or_within IDA (MGI:4439416|PMID:20223197) MGI PMID:20223197 MGI:4439416 NCBI chr 2:29,845,631...29,845,727
Ensembl chr 2:29,845,631...29,845,727
JBrowse link
G Mir21a microRNA 21a acts_upstream_of_or_within IMP (MGI:5693365|PMID:19147652) MGI PMID:19147652 MGI:5693365 NCBI chr11:86,584,067...86,584,158
Ensembl chr11:86,584,067...86,584,158
JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within IGI
IDA
(MGI:5516374|PMID:24101522)
(MGI:5013854|PMID:21628588)
MGI PMID:21628588 PMID:24101522 MGI:5013854 MGI:5516374 NCBI chr 8:84,208,518...84,208,592
Ensembl chr 8:84,208,518...84,208,592
JBrowse link
G Mir24-1 microRNA 24-1 acts_upstream_of_or_within IMP (MGI:5604962|PMID:24824656) MGI PMID:24824656 MGI:5604962 NCBI chr13:63,301,208...63,301,275
Ensembl chr13:63,301,208...63,301,275
JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within IDA (MGI:5604962|PMID:24824656) MGI PMID:24824656 MGI:5604962 NCBI chr 8:84,208,815...84,208,921
Ensembl chr 8:84,208,815...84,208,921
JBrowse link
G Mir296 microRNA 296 acts_upstream_of_or_within IDA (MGI:3822253|PMID:18806776) MGI PMID:18806776 MGI:3822253 NCBI chr 2:174,267,047...174,267,125
Ensembl chr 2:174,267,047...174,267,125
JBrowse link
G Mir29a microRNA 29a acts_upstream_of_or_within IDA (MGI:5013521|PMID:21522133) MGI PMID:21522133 MGI:5013521 NCBI chr 6:31,062,660...31,062,747
Ensembl chr 6:31,062,660...31,062,747
JBrowse link
G Mir29b-1 microRNA 29b-1 acts_upstream_of_or_within IDA (MGI:5013521|PMID:21522133) MGI PMID:21522133 MGI:5013521 NCBI chr 6:31,063,023...31,063,093
Ensembl chr 6:31,063,023...31,063,093
JBrowse link
G Mir29b-2 microRNA 29b-2 acts_upstream_of_or_within IDA (MGI:5013521|PMID:21522133) MGI PMID:21522133 MGI:5013521 NCBI chr 1:195,037,040...195,037,120
Ensembl chr 1:195,037,040...195,037,120
JBrowse link
G Mir29c microRNA 29c acts_upstream_of_or_within IDA (MGI:5013521|PMID:21522133) MGI PMID:21522133 MGI:5013521 NCBI chr 1:195,037,547...195,037,634
Ensembl chr 1:195,037,547...195,037,634
JBrowse link
G Mir301 microRNA 301 acts_upstream_of_or_within IDA (MGI:5426073|PMID:22517757) MGI PMID:22517757 MGI:5426073 NCBI chr11:87,113,004...87,113,089
Ensembl chr11:87,113,004...87,113,089
JBrowse link
G Mir30c-1 microRNA 30c-1 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 4:120,769,534...120,769,622
Ensembl chr 4:120,769,534...120,769,622
JBrowse link
G Mir30c-2 microRNA 30c-2 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr 1:23,291,701...23,291,784
Ensembl chr 1:23,291,701...23,291,784
JBrowse link
G Mir320 microRNA 320 acts_upstream_of_or_within IDA (MGI:5447874|PMID:22925886) MGI PMID:22925886 MGI:5447874 NCBI chr14:70,443,510...70,443,591
Ensembl chr14:70,443,510...70,443,591
JBrowse link
G Mir330 microRNA 330 acts_upstream_of_or_within IDA (MGI:5305371|PMID:21993888) MGI PMID:21993888 MGI:5305371 NCBI chr 7:19,181,465...19,181,562
Ensembl chr 7:19,181,465...19,181,562
JBrowse link
G Mir338 microRNA 338 acts_upstream_of_or_within IDA (MGI:5013854|PMID:21628588) MGI PMID:21628588 MGI:5013854 NCBI chr11:120,014,765...120,014,862
Ensembl chr11:120,014,765...120,014,862
JBrowse link
G Mir34a microRNA 34a acts_upstream_of_or_within IDA (MGI:4440730|PMID:19895913) MGI PMID:19895913 MGI:4440730 NCBI chr 4:150,068,454...150,068,555
Ensembl chr 4:150,068,454...150,068,555
JBrowse link
G Mir34b microRNA 34b acts_upstream_of_or_within IDA
IGI
(MGI:4440730|PMID:19895913)
(MGI:5578416|PMID:24982181)
MGI PMID:19895913 PMID:24982181 MGI:4440730 MGI:5578416 NCBI chr 9:51,103,562...51,103,645
Ensembl chr 9:51,103,562...51,103,645
JBrowse link
G Mir34c microRNA 34c acts_upstream_of_or_within IDA
IGI
(MGI:5013854|PMID:21628588)
(MGI:5578416|PMID:24982181)
MGI PMID:21628588 PMID:24982181 MGI:5013854 MGI:5578416 NCBI chr 9:51,103,034...51,103,110
Ensembl chr 9:51,103,034...51,103,110
JBrowse link
G Mir370 microRNA 370 acts_upstream_of_or_within IDA
IMP
(MGI:5477897|PMID:23399934) MGI PMID:23399934 MGI:5477897 NCBI chr12:109,618,258...109,618,336
Ensembl chr12:109,618,258...109,618,336
JBrowse link
G Mir382 microRNA 382 involved_in IDA (MGI:6159438|PMID:29606596) MGI PMID:29606596 MGI:6159438 NCBI chr12:109,733,771...109,733,846
Ensembl chr12:109,733,771...109,733,846
JBrowse link
G Mir411 microRNA 411 involved_in IDA (MGI:6159438|PMID:29606596) MGI PMID:29606596 MGI:6159438 NCBI chr12:109,710,175...109,710,256
Ensembl chr12:109,710,175...109,710,256
JBrowse link
G Mir449a microRNA 449a acts_upstream_of_or_within IGI (MGI:5578416|PMID:24982181) MGI PMID:24982181 MGI:5578416 NCBI chr13:113,037,534...113,037,624
Ensembl chr13:113,037,534...113,037,624
JBrowse link
G Mir449b microRNA 449b acts_upstream_of_or_within IGI (MGI:5578416|PMID:24982181) MGI PMID:24982181 MGI:5578416 NCBI chr13:113,037,419...113,037,498
Ensembl chr13:113,037,419...113,037,498
JBrowse link
G Mir449c microRNA 449c acts_upstream_of_or_within IGI (MGI:5578416|PMID:24982181) MGI PMID:24982181 MGI:5578416 NCBI chr13:113,035,983...113,036,091
Ensembl chr13:113,035,983...113,036,091
JBrowse link
G Mir450b microRNA 450b acts_upstream_of_or_within ISO (MGI:5448345|PMID:22367714) MGI PMID:22367714 MGI:5448345 NCBI chr  X:53,047,997...53,048,078
Ensembl chr  X:53,047,997...53,048,078
JBrowse link
G Mir470 microRNA 470 acts_upstream_of_or_within IDA (MGI:3822253|PMID:18806776) MGI PMID:18806776 MGI:3822253 NCBI chr  X:66,813,951...66,814,025
Ensembl chr  X:66,813,951...66,814,025
JBrowse link
G Mir489 microRNA 489 acts_upstream_of_or_within IDA (MGI:5312165|PMID:22358842) MGI PMID:22358842 MGI:5312165 NCBI chr 6:3,721,897...3,722,003
Ensembl chr 6:3,721,897...3,722,003
JBrowse link
G Mir494 microRNA 494 acts_upstream_of_or_within IDA (MGI:5302482|PMID:20837890) MGI PMID:20837890 MGI:5302482 NCBI chr12:109,715,318...109,715,402
Ensembl chr12:109,715,318...109,715,402
JBrowse link
G Mir511 microRNA 511 acts_upstream_of_or_within IDA (MGI:5486412|PMID:22832163) MGI PMID:22832163 MGI:5486412 NCBI chr 2:14,261,003...14,261,081
Ensembl chr 2:14,261,003...14,261,081
JBrowse link
G Mir539 microRNA 539 acts_upstream_of_or_within IMP (MGI:5559032|PMID:24710105) MGI PMID:24710105 MGI:5559032 NCBI chr12:109,728,129...109,728,202
Ensembl chr12:109,728,129...109,728,202
JBrowse link
G Mir541 microRNA 541 involved_in IDA (MGI:6159438|PMID:29606596) MGI PMID:29606596 MGI:6159438 NCBI chr12:109,742,409...109,742,498
Ensembl chr12:109,742,409...109,742,498
JBrowse link
G Mir543 microRNA 543 involved_in IDA (MGI:6159438|PMID:29606596) MGI PMID:29606596 MGI:6159438 NCBI chr12:109,717,258...109,717,333
Ensembl chr12:109,717,258...109,717,333
JBrowse link
G Mir675 microRNA 675 acts_upstream_of_or_within IMP (MGI:5566551|PMID:24532688) MGI PMID:24532688 MGI:5566551 NCBI chr 7:142,577,064...142,577,147
Ensembl chr 7:142,577,064...142,577,147
JBrowse link
G Mir696 microRNA 696 acts_upstream_of_or_within IDA
IMP
(MGI:4943838|PMID:20086200) MGI PMID:20086200 MGI:4943838
G Mir702 microRNA 702 acts_upstream_of_or_within IDA (MGI:5447874|PMID:22925886) MGI PMID:22925886 MGI:5447874 NCBI chr 5:136,991,433...136,991,541
Ensembl chr 5:136,991,433...136,991,541
JBrowse link
G Mir874 microRNA 874 acts_upstream_of_or_within IDA (MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:5551666 NCBI chr13:58,023,125...58,023,200
Ensembl chr13:58,023,125...58,023,200
JBrowse link
G Mirlet7a-1 microRNA let7a-1 acts_upstream_of_or_within IDA
IGI
(MGI:4359358|PMID:18604195)
(MGI:5461254|PMID:23152446)
MGI PMID:18604195 PMID:23152446 MGI:4359358 MGI:5461254 NCBI chr13:48,538,179...48,538,272
Ensembl chr13:48,538,179...48,538,272
JBrowse link
G Mirlet7a-2 microRNA let7a-2 acts_upstream_of_or_within IDA
IGI
(MGI:4359358|PMID:18604195)
(MGI:5461254|PMID:23152446)
MGI PMID:18604195 PMID:23152446 MGI:4359358 MGI:5461254 NCBI chr 9:41,536,716...41,536,811
Ensembl chr 9:41,536,716...41,536,811
JBrowse link
G Mkks McKusick-Kaufman syndrome acts_upstream_of_or_within IMP (MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) MGI PMID:18317593 PMID:19150989 MGI:3794515 MGI:3836843 NCBI chr 2:136,873,780...136,891,406
Ensembl chr 2:136,873,780...136,891,389
JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IMP (MGI:6201889|PMID:25049354) ARUK-UCL PMID:25049354 MGI:6201889 NCBI chr 9:7,558,429...7,568,486
Ensembl chr 9:7,558,456...7,568,485
JBrowse link
G Morc1 microrchidia 1 involved_in IMP (MGI:5700272|PMID:26275923) MGI PMID:26275923 MGI:5700272 NCBI chr16:48,431,237...48,630,905
Ensembl chr16:48,431,237...48,630,900
JBrowse link
G Msr1 macrophage scavenger receptor 1 involved_in IMP (MGI:5902691|PMID:11240025) ARUK-UCL PMID:11240025 MGI:5902691 NCBI chr 8:39,543,232...39,642,750
Ensembl chr 8:39,581,685...39,642,673
JBrowse link
G Msx1os msh homeobox 1 opposite strand acts_upstream_of_or_within IDA (MGI:2136110|PMID:11390985) MGI PMID:11390985 MGI:2136110 NCBI chr 5:37,820,564...37,822,751 JBrowse link
G Musk muscle, skeletal, receptor tyrosine kinase involved_in ISO epsilon-acetylcholine receptor RGD
MGI
PMID:15604144 GO_REF:0000096 MGI:4417868 RGD:2317103 NCBI chr 4:58,285,729...58,377,848
Ensembl chr 4:58,285,960...58,374,303
JBrowse link
G Myadm myeloid-associated differentiation marker involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:3,289,038...3,299,355
Ensembl chr 7:3,289,080...3,300,442
JBrowse link
G Myc myelocytomatosis oncogene involved_in ISO Adipor1 RGD
MGI
PMID:23349663 GO_REF:0000096 MGI:4417868 RGD:7207857 NCBI chr15:61,985,341...61,990,361
Ensembl chr15:61,985,391...61,990,374
JBrowse link
G Mycn v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:12,936,093...12,941,836
Ensembl chr12:12,936,093...12,941,914
JBrowse link
G Mycs myc-like oncogene, s-myc protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:5,466,904...5,469,265
Ensembl chr  X:5,466,898...5,469,265
JBrowse link
G Myt1 myelin transcription factor 1 acts_upstream_of_or_within IMP (MGI:3763794|PMID:17928203) MGI PMID:17928203 MGI:3763794 NCBI chr 2:181,763,332...181,827,775
Ensembl chr 2:181,763,332...181,827,797
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 involved_in ISO transcript levels RGD
MGI
PMID:19608741 GO_REF:0000096 MGI:4417868 RGD:5688288 NCBI chr11:62,315,663...62,457,414
Ensembl chr11:62,316,426...62,458,541
JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:38,418,907...38,465,197
Ensembl chr18:38,410,396...38,465,303
JBrowse link
G Ndfip2 Nedd4 family interacting protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:105,258,591...105,309,298
Ensembl chr14:105,258,573...105,309,298
JBrowse link
G Nfkb1 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:135,584,655...135,691,969
Ensembl chr 3:135,584,655...135,691,547
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:69,190,692...69,194,658
Ensembl chr14:69,190,638...69,194,662
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 involved_in ISO Mmp2 RGD
MGI
PMID:12010125 GO_REF:0000096 MGI:4417868 RGD:633207 NCBI chr11:93,958,925...93,968,272
Ensembl chr11:93,956,979...93,968,521
JBrowse link
G Noct nocturnin involved_in IMP (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chr 3:51,224,447...51,251,654
Ensembl chr 3:51,224,447...51,251,644
JBrowse link
G Nog noggin acts_upstream_of_or_within IDA (MGI:5051994|PMID:21624478) MGI PMID:21624478 MGI:5051994 NCBI chr11:89,300,638...89,302,559
Ensembl chr11:89,300,638...89,302,332
JBrowse link
G Nos2 nitric oxide synthase 2, inducible involved_in IGI
ISO
(MGI:5319619|PMID:12085352) UniProt
MGI
PMID:12085352 GO_REF:0000096 MGI:4834177 MGI:5319619 NCBI chr11:78,920,787...78,960,226
Ensembl chr11:78,920,787...78,960,254
JBrowse link
G Notch1 notch 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:26,457,902...26,503,822
Ensembl chr 2:26,457,903...26,516,663
JBrowse link
G Notch2 notch 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:98,013,538...98,150,367
Ensembl chr 3:98,013,527...98,150,361
JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within IGI (MGI:3805393|PMID:18625840) MGI PMID:18625840 MGI:3805393 NCBI chr11:33,152,498...33,164,142
Ensembl chr11:33,152,287...33,163,206
JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:133,553,376...133,556,686
Ensembl chr 4:133,553,376...133,556,536
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 involved_in ISO RGD
MGI
PMID:7971966 GO_REF:0000096 MGI:4417868 RGD:61674 NCBI chr 7:44,549,616...44,553,968
Ensembl chr 7:44,549,616...44,553,951
JBrowse link
G Nrxn1 neurexin I involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:90,033,644...91,093,159
Ensembl chr17:90,033,631...91,093,071
JBrowse link
G Nts neurotensin acts_upstream_of ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:102,481,756...102,490,418
Ensembl chr10:102,481,756...102,490,486
JBrowse link
G Ocln occludin involved_in ISO
IMP
(MGI:6368048|PMID:21415414) MGI
ARUK-UCL
PMID:21415414 GO_REF:0000096 MGI:4834177 MGI:6368048 NCBI chr13:100,496,504...100,552,718
Ensembl chr13:100,496,507...100,552,718
JBrowse link
G Olr1 oxidized low density lipoprotein (lectin-like) receptor 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:129,479,150...129,507,350
Ensembl chr 6:129,485,244...129,507,165
JBrowse link
G Oprd1 opioid receptor, delta 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:132,110,188...132,144,486
Ensembl chr 4:132,110,726...132,144,486
JBrowse link
G Ovol2 ovo like zinc finger 2 involved_in IDA (MGI:6284898|PMID:28455959) ARUK-UCL PMID:28455959 MGI:6284898 NCBI chr 2:144,305,175...144,332,080
Ensembl chr 2:144,305,175...144,332,146
JBrowse link
G Park7 Parkinson disease (autosomal recessive, early onset) 7 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:150,897,133...150,909,921
Ensembl chr 4:150,897,133...150,914,437
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr15:76,232,995...76,243,440
Ensembl chr15:76,231,174...76,243,441
JBrowse link
G Parp14 poly (ADP-ribose) polymerase family, member 14 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr16:35,831,892...35,871,518
Ensembl chr16:35,832,874...35,871,544
JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr16:35,938,470...35,972,621
Ensembl chr16:35,938,470...35,972,605
JBrowse link
G Pawr PRKC, apoptosis, WT1, regulator involved_in IMP (MGI:5648604|PMID:25472717) BHF-UCL PMID:25472717 MGI:5648604 NCBI chr10:108,332,189...108,414,391
Ensembl chr10:108,332,121...108,414,240
JBrowse link
G Pcx pyruvate carboxylase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:4,510,472...4,621,752
Ensembl chr19:4,510,472...4,621,752
JBrowse link
G Pdcd10 programmed cell death 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:75,516,490...75,556,852
Ensembl chr 3:75,516,490...75,556,856
JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:79,995,865...80,024,614
Ensembl chr15:79,995,874...80,014,977
JBrowse link
G Pgr progesterone receptor involved_in ISO (PMID:21695196) UniProt PMID:21695196 NCBI chr 9:8,898,900...8,968,611
Ensembl chr 9:8,899,833...8,968,611
JBrowse link
G Pias3 protein inhibitor of activated STAT 3 acts_upstream_of_or_within IDA (MGI:3836131|PMID:17442941) MGI PMID:17442941 MGI:3836131 NCBI chr 3:96,696,361...96,706,070
Ensembl chr 3:96,696,384...96,706,070
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:90,130,192...90,209,447
Ensembl chr 7:90,130,213...90,213,465
JBrowse link
G Pick1 protein interacting with C kinase 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr15:79,229,140...79,249,466
Ensembl chr15:79,229,173...79,249,484
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:32,397,065...32,466,112
Ensembl chr 3:32,397,671...32,468,486
JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:149,649,168...149,702,566
Ensembl chr 4:149,649,168...149,702,571
JBrowse link
G Pink1 PTEN induced putative kinase 1 involved_in IMP (MGI:5582017|PMID:24475098) ParkinsonsUK-UCL PMID:24475098 MGI:5582017 NCBI chr 4:138,313,409...138,326,296
Ensembl chr 4:138,313,409...138,326,307
JBrowse link
G Pla2g3 phospholipase A2, group III acts_upstream_of_or_within ISO
IDA
(MGI:5912601|PMID:26637123) MGI PMID:26637123 MGI:5912601 NCBI chr11:3,488,158...3,499,346
Ensembl chr11:3,488,284...3,499,350
JBrowse link
G Plag1 pleiomorphic adenoma gene 1 involved_in IDA (MGI:5285167|PMID:19808959) UniProt PMID:19808959 MGI:5285167 NCBI chr 4:3,898,769...3,938,430
Ensembl chr 4:3,900,996...3,938,423
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within IMP (MGI:5517729|PMID:23847051) MGI PMID:23847051 MGI:5517729 NCBI chr11:63,128,982...63,159,547
Ensembl chr11:63,128,982...63,159,547
JBrowse link
G Pou2f1 POU domain, class 2, transcription factor 1 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 1:165,865,150...166,002,749
Ensembl chr 1:165,865,154...166,002,678
JBrowse link
G Pou3f2 POU domain, class 3, transcription factor 2 involved_in IMP (MGI:5449484|PMID:23069940) CACAO PMID:23069940 MGI:5449484 NCBI chr 4:22,482,095...22,488,366
Ensembl chr 4:22,482,780...22,488,366
JBrowse link
G Pou4f1 POU domain, class 4, transcription factor 1 involved_in IMP (MGI:6158788|PMID:28594399) ARUK-UCL PMID:28594399 MGI:6158788 NCBI chr14:104,461,675...104,468,118
Ensembl chr14:104,461,676...104,467,999
JBrowse link
G Pou5f1 POU domain, class 5, transcription factor 1 involved_in IDA (MGI:5490149|PMID:23495099) AgBase PMID:23495099 MGI:5490149 NCBI chr17:35,506,032...35,510,777
Ensembl chr17:35,506,018...35,510,772
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in
acts_upstream_of_or_within
IMP
IDA
ISO
(MGI:6106785|PMID:28467929)
(MGI:5462034|PMID:21880694)
ARUK-UCL
BHF-UCL
MGI
PMID:21880694 PMID:28467929 GO_REF:0000096 MGI:4834177 MGI:5462034 MGI:6106785 NCBI chr 6:115,360,879...115,490,404
Ensembl chr 6:115,360,951...115,490,399
JBrowse link
G Ppp2cb protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform acts_upstream_of_or_within ISO (PMID:28159925) ARUK-UCL
MGI
PMID:28159925 GO_REF:0000096 MGI:4834177 NCBI chr 8:33,599,621...33,619,804
Ensembl chr 8:33,599,625...33,619,441
JBrowse link
G Ppp3ca protein phosphatase 3, catalytic subunit, alpha isoform involved_in IDA (MGI:5562625|PMID:24161931) BHF-UCL PMID:24161931 MGI:5562625 NCBI chr 3:136,669,714...136,937,727
Ensembl chr 3:136,670,124...136,937,727
JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain acts_upstream_of_or_within IMP (MGI:5014435|PMID:21670299) MGI PMID:21670299 MGI:5014435 NCBI chr10:44,437,174...44,528,558
Ensembl chr10:44,437,177...44,528,501
JBrowse link
G Prdm4 PR domain containing 4 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr10:85,891,964...85,917,152
Ensembl chr10:85,891,966...85,917,142
JBrowse link
G Prkaa1 protein kinase, AMP-activated, alpha 1 catalytic subunit involved_in IGI (MGI:6148443|PMID:27430620) ARUK-UCL PMID:27430620 MGI:6148443 NCBI chr15:5,143,861...5,181,899
Ensembl chr15:5,143,861...5,181,899
JBrowse link
G Prkaa2 protein kinase, AMP-activated, alpha 2 catalytic subunit involved_in IGI (MGI:6148443|PMID:27430620) ARUK-UCL PMID:27430620 MGI:6148443 NCBI chr 4:105,029,649...105,109,898
Ensembl chr 4:105,029,874...105,109,890
JBrowse link
G Prkar1a protein kinase, cAMP dependent regulatory, type I, alpha acts_upstream_of ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:109,649,023...109,669,663
Ensembl chr11:109,649,405...109,669,656
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:10,840,359...12,063,370
Ensembl chr17:10,840,384...12,063,361
JBrowse link
G Psen1 presenilin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:83,688,152...83,735,095
Ensembl chr12:83,688,152...83,735,199
JBrowse link
G Pth parathyroid hormone involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:113,385,576...113,388,672
Ensembl chr 7:113,385,580...113,388,570
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) involved_in IMP
ISO
(MGI:5562517|PMID:23871208), (MGI:5640942|PMID:23991106) UniProt
MGI
PMID:23871208 PMID:23991106 GO_REF:0000096 MGI:4834177 MGI:5562517 MGI:5640942 NCBI chr 3:103,856,575...103,912,252
Ensembl chr 3:103,859,795...103,912,247
JBrowse link
G Ptrh2 peptidyl-tRNA hydrolase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:86,684,074...86,692,457
Ensembl chr11:86,683,985...86,692,457
JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:48,800,360...48,806,241
Ensembl chr11:48,800,332...48,806,434
JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within IGI (MGI:3771251|PMID:18026104) MGI PMID:18026104 MGI:3771251 NCBI chr11:98,927,800...98,974,942
Ensembl chr11:98,927,818...98,974,942
JBrowse link
G Rb1 RB transcriptional corepressor 1 acts_upstream_of_or_within ISO
IMP
(MGI:5607667|PMID:25100735) MGI PMID:25100735 MGI:5607667 NCBI chr14:73,192,858...73,325,951
Ensembl chr14:73,183,673...73,325,822
JBrowse link
G Rbl1 RB transcriptional corepressor like 1 acts_upstream_of_or_within ISO (MGI:5607667|PMID:25100735) MGI PMID:25100735 MGI:5607667 NCBI chr 2:157,145,893...157,204,534
Ensembl chr 2:157,145,893...157,204,534
JBrowse link
G Rbl2 RB transcriptional corepressor like 2 acts_upstream_of_or_within ISO (MGI:5607667|PMID:25100735) MGI PMID:25100735 MGI:5607667 NCBI chr 8:91,070,057...91,123,844
Ensembl chr 8:91,070,057...91,123,844
JBrowse link
G Rbms3 RNA binding motif, single stranded interacting protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:116,572,746...117,629,913
Ensembl chr 9:116,572,746...117,872,584
Ensembl chr 9:116,572,746...117,872,584
JBrowse link
G Rcor1 REST corepressor 1 involved_in IDA (MGI:3580760|PMID:15907476) UniProt PMID:15907476 MGI:3580760 NCBI chr12:111,039,367...111,115,902
Ensembl chr12:111,039,351...111,115,901
JBrowse link
G Rel reticuloendotheliosis oncogene involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:23,736,847...23,770,969
Ensembl chr11:23,736,847...23,770,970
JBrowse link
G Rest RE1-silencing transcription factor involved_in IDA
ISO
IMP
(MGI:3580760|PMID:15907476), (MGI:6294387|PMID:11039732)
(MGI:1289984|PMID:9771705)
UniProt
MGI
PMID:9771705 PMID:11039732 PMID:15907476 GO_REF:0000096 MGI:1289984 MGI:3580760 MGI:4417868 MGI:4834177 MGI:6294387 NCBI chr 5:77,265,494...77,286,432
Ensembl chr 5:77,265,491...77,286,432
JBrowse link
G Rnaseh2b ribonuclease H2, subunit B acts_upstream_of_or_within IMP (MGI:5435090|PMID:22802351) MGI PMID:22802351 MGI:5435090 NCBI chr14:62,332,068...62,372,996
Ensembl chr14:62,292,589...62,372,992
JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in IDA (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr16:72,027,518...73,047,491
Ensembl chr16:72,308,306...73,046,095
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IMP (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr12:16,894,978...16,988,274
Ensembl chr12:16,894,895...16,987,823
JBrowse link
G Ros1 Ros1 proto-oncogene acts_upstream_of_or_within IMP (MGI:2675865|PMID:12773415) MGI PMID:12773415 MGI:2675865 NCBI chr10:52,044,863...52,195,398
Ensembl chr10:52,045,721...52,195,244
JBrowse link
G Rxra retinoid X receptor alpha involved_in TAS (MGI:4943617|PMID:20299672) DFLAT PMID:20299672 MGI:4943617 NCBI chr 2:27,676,445...27,763,319
Ensembl chr 2:27,676,440...27,762,957
JBrowse link
G Samd7 sterile alpha motif domain containing 7 involved_in IDA (MGI:5908328|PMID:23565263) UniProt PMID:23565263 MGI:5908328 NCBI chr 3:30,746,293...30,767,174
Ensembl chr 3:30,746,293...30,767,174
JBrowse link
G Serpine1 serine (or cysteine) peptidase inhibitor, clade E, member 1 involved_in ISO caspase-3 RGD
MGI
PMID:22659625 GO_REF:0000096 MGI:4417868 RGD:8547927 NCBI chr 5:137,061,504...137,072,272
Ensembl chr 5:137,061,504...137,072,268
JBrowse link
G Serpinf1 serine (or cysteine) peptidase inhibitor, clade F, member 1 involved_in ISO Hif1a RGD
MGI
PMID:21922517 GO_REF:0000096 MGI:4417868 RGD:8554899 NCBI chr11:75,410,029...75,422,623
Ensembl chr11:75,409,769...75,422,701
JBrowse link
G Setdb1 SET domain, bifurcated 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:95,323,525...95,357,202
Ensembl chr 3:95,323,525...95,357,202
JBrowse link
G Setdb2 SET domain, bifurcated 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:59,402,009...59,440,880
Ensembl chr14:59,402,009...59,440,884
JBrowse link
G Sfmbt2 Scm-like with four mbt domains 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:10,370,440...10,595,253
Ensembl chr 2:10,370,510...10,595,253
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 acts_upstream_of_or_within
involved_in
IMP
ISO
(MGI:4429763|PMID:19850029) MGI PMID:19850029 GO_REF:0000096 MGI:4429763 MGI:4834177 NCBI chr 8:23,411,383...23,449,632
Ensembl chr 8:23,411,502...23,449,632
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in IDA (MGI:4835154|PMID:10980594) UniProt PMID:10980594 MGI:4835154 NCBI chr 3:83,765,750...83,774,314
Ensembl chr 3:83,766,321...83,774,316
JBrowse link
G Sh3gl2 SH3-domain GRB2-like 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:85,205,456...85,389,380
Ensembl chr 4:85,205,126...85,639,195
JBrowse link
G Shh sonic hedgehog involved_in IMP (MGI:3611729|PMID:16396903) UniProt PMID:16396903 MGI:3611729 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:63,319,005...63,339,035
Ensembl chr10:63,319,005...63,381,704
JBrowse link
G Slc24a3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 acts_upstream_of_or_within IMP (MGI:6104227|PMID:28602864) ARUK-UCL PMID:28602864 MGI:6104227 NCBI chr 2:145,167,775...145,642,166
Ensembl chr 2:145,167,754...145,642,166
JBrowse link
G Slc2a10 solute carrier family 2 (facilitated glucose transporter), member 10 acts_upstream_of_or_within ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:165,503,897...165,519,917
Ensembl chr 2:165,503,787...165,519,917
JBrowse link
G Slc35c2 solute carrier family 35, member C2 acts_upstream_of_or_within IDA (MGI:4849897|PMID:20837470) MGI PMID:20837470 MGI:4849897 NCBI chr 2:165,276,522...165,287,888
Ensembl chr 2:165,276,554...165,287,869
JBrowse link
G Slc7a5 solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 acts_upstream_of ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:121,881,146...121,907,686
Ensembl chr 8:121,881,150...121,907,694
JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within IGI (MGI:3819920|PMID:18829537) MGI PMID:18829537 MGI:3819920 NCBI chr 5:47,981,291...48,307,735
Ensembl chr 5:47,983,138...48,307,733
JBrowse link
G Slit3 slit guidance ligand 3 acts_upstream_of_or_within IGI (MGI:3819920|PMID:18829537) MGI PMID:18829537 MGI:3819920 NCBI chr11:35,121,456...35,708,507
Ensembl chr11:35,121,224...35,708,507
JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within IMP (MGI:5461254|PMID:23152446) MGI PMID:23152446 MGI:5461254 NCBI chr18:76,241,090...76,311,748
Ensembl chr18:76,241,580...76,310,963
JBrowse link
G Smcr8 Smith-Magenis syndrome chromosome region, candidate 8 homolog (human) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:60,777,525...60,788,287
Ensembl chr11:60,777,524...60,788,287
JBrowse link
G Smo smoothened, frizzled class receptor involved_in IMP (MGI:3611729|PMID:16396903) UniProt PMID:16396903 MGI:3611729 NCBI chr 6:29,735,497...29,761,366
Ensembl chr 6:29,735,503...29,761,365
JBrowse link
G Snx12 sorting nexin 12 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr  X:101,089,367...101,222,583
Ensembl chr  X:101,097,786...101,222,563
JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 involved_in ISO
IMP
(MGI:5285167|PMID:19808959) MGI
UniProt
PMID:19808959 GO_REF:0000096 MGI:4834177 MGI:5285167 NCBI chr12:27,334,268...27,342,718
Ensembl chr12:27,334,264...27,342,574
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (MGI:5524169|PMID:24218621) MGI PMID:24218621 MGI:5524169 NCBI chr11:112,782,210...112,787,757
Ensembl chr11:112,782,224...112,787,760
JBrowse link
G Spi1 spleen focus forming virus (SFFV) proviral integration oncogene involved_in ISO
IMP
(MGI:6093262|PMID:28628103) MGI
ARUK-UCL
PMID:28628103 GO_REF:0000096 MGI:4834177 MGI:6093262 NCBI chr 2:91,082,374...91,115,759
Ensembl chr 2:91,082,390...91,115,756
JBrowse link
G Srsf6 serine and arginine-rich splicing factor 6 involved_in ISO Bcl2l11 RGD
MGI
PMID:23737756 GO_REF:0000096 MGI:4417868 RGD:11039479 NCBI chr 2:162,931,508...162,937,121
Ensembl chr 2:162,931,528...162,937,121
JBrowse link
G Sry sex determining region of Chr Y acts_upstream_of_or_within IDA (MGI:3027475|PMID:11869290) MGI PMID:11869290 MGI:3027475 NCBI chr  Y:2,662,471...2,663,658
Ensembl chr  Y:2,662,471...2,663,658
JBrowse link
G Stc2 stanniocalcin 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:31,359,441...31,370,061
Ensembl chr11:31,357,307...31,370,074
JBrowse link
G Stox1 storkhead box 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:62,659,043...62,726,094
Ensembl chr10:62,659,043...62,726,128
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chr  X:101,527,572...101,601,789
Ensembl chr  X:101,532,734...101,601,789
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:148,612,382...148,627,084
Ensembl chr 4:148,612,382...148,627,019
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in IMP (MGI:4457239|PMID:18665841) UniProt PMID:18665841 MGI:4457239 NCBI chr10:121,546,455...121,586,794
Ensembl chr10:121,546,455...121,586,787
JBrowse link
G Tcf4 transcription factor 4 acts_upstream_of_or_within IDA (MGI:4453908|PMID:20231428) MGI PMID:20231428 MGI:4453908 NCBI chr18:69,343,429...69,687,967
Ensembl chr18:69,343,356...69,689,079
JBrowse link
G Tcl1 T cell lymphoma breakpoint 1 acts_upstream_of_or_within IMP (MGI:3759699|PMID:17938240) MGI PMID:17938240 MGI:3759699 NCBI chr12:105,216,753...105,222,737
Ensembl chr12:105,216,750...105,222,793
JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:107,069,400...107,096,548
Ensembl chr 8:107,069,400...107,096,547
JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:73,626,911...73,649,843
Ensembl chr13:73,626,911...73,649,843
JBrowse link
G Tfap4 transcription factor AP4 involved_in IDA (MGI:3663964|PMID:16924111) UniProt PMID:16924111 MGI:3663964 NCBI chr16:4,544,661...4,560,762
Ensembl chr16:4,544,661...4,559,854
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in
acts_upstream_of_or_within
ISO
IMP
(MGI:6147436|PMID:29529050)
(MGI:5921830|PMID:26634652)
MGI
BHF-UCL
PMID:26634652 PMID:29529050 GO_REF:0000096 MGI:4834177 MGI:5921830 MGI:6147436 NCBI chr 7:25,687,002...25,705,077
Ensembl chr 7:25,687,002...25,705,077
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO
IDA
(MGI:5688835|PMID:21984612) MGI
UniProt
PMID:21984612 GO_REF:0000096 MGI:4834177 MGI:5688835 NCBI chr 1:186,622,787...186,709,697
Ensembl chr 1:186,622,792...186,705,989
JBrowse link
G Tgfbr3 transforming growth factor, beta receptor III involved_in IDA (MGI:5688831|PMID:22960625) BHF-UCL PMID:22960625 MGI:5688831 NCBI chr 5:107,106,567...107,289,629
Ensembl chr 5:107,106,570...107,289,629
JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 involved_in ISO tropoelastin RGD
MGI
PMID:18441095 GO_REF:0000096 MGI:4417868 RGD:2317192 NCBI chr17:70,844,205...70,853,532
Ensembl chr17:70,844,205...70,853,546
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO (MGI:5507898|PMID:23275542) MGI PMID:23275542 MGI:5507898 NCBI chr 3:65,528,447...65,555,518
Ensembl chr 3:65,528,410...65,555,518
JBrowse link
G Tle5 TLE family member 5, transcriptional modulator involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:81,559,444...81,566,371
Ensembl chr10:81,559,488...81,566,362
JBrowse link
G Tmf1 TATA element modulatory factor 1 acts_upstream_of_or_within IMP (MGI:5440392|PMID:22553199) MGI PMID:22553199 MGI:5440392 NCBI chr 6:97,151,950...97,179,151
Ensembl chr 6:97,152,997...97,179,122
JBrowse link
G Tnf tumor necrosis factor involved_in
acts_upstream_of
acts_upstream_of_or_within
ISO
IDA
(PMID:24299952)
(MGI:5763710|PMID:26427354)
(PMID:15345745), (PMID:22267480), (PMID:26371161)
ARUK-UCL
MGI
BHF-UCL
PMID:15345745 PMID:22267480 PMID:24299952 PMID:26371161 PMID:26427354 GO_REF:0000096 MGI:4834177 MGI:5763710 NCBI chr17:35,199,367...35,202,007
Ensembl chr17:35,199,381...35,202,007
JBrowse link
G Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a involved_in ISO type 2 iodothyronine deiodinase in alpha tanycytes RGD
MGI
PMID:20501675 GO_REF:0000096 MGI:4417868 RGD:5130988 NCBI chr 6:125,349,723...125,362,483
Ensembl chr 6:125,349,362...125,362,484
JBrowse link
G Trim6 tripartite motif-containing 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:104,218,795...104,235,152
Ensembl chr 7:104,218,793...104,235,152
JBrowse link
G Trp53 transformation related protein 53 acts_upstream_of_or_within IGI (MGI:3805393|PMID:18625840) MGI PMID:18625840 MGI:3805393 NCBI chr11:69,580,348...69,591,873
Ensembl chr11:69,580,359...69,591,873
JBrowse link
G Trp53cor1 tumor protein p53 pathway corepressor 1 acts_upstream_of_or_within IMP (MGI:4881379|PMID:20673990) MGI PMID:20673990 MGI:4881379 NCBI chr17:29,057,474...29,079,126
Ensembl chr17:29,057,430...29,079,179
JBrowse link
G Trp53inp1 transformation related protein 53 inducible nuclear protein 1 involved_in IMP (MGI:5788610|PMID:26589288) BHF-UCL PMID:26589288 MGI:5788610 NCBI chr 4:11,156,441...11,174,379
Ensembl chr 4:11,156,431...11,174,379
JBrowse link
G Ttbk1 tau tubulin kinase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:46,442,448...46,487,675
Ensembl chr17:46,442,448...46,487,675
JBrowse link
G Ucn urocortin involved_in ISO ghrelin
Pla2g6
RGD
MGI
PMID:14563694 PMID:21540451 GO_REF:0000096 MGI:4417868 RGD:5490560 RGD:5508192 NCBI chr 5:31,137,989...31,138,895
Ensembl chr 5:31,138,063...31,138,829
JBrowse link
G Ucn2 urocortin 2 involved_in ISO Fshb RGD
MGI
PMID:19193717 GO_REF:0000096 MGI:4417868 RGD:2317015 NCBI chr 9:108,986,163...108,987,164
Ensembl chr 9:108,986,010...108,987,164
JBrowse link
G Upk3b uroplakin 3B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:136,038,496...136,044,993
Ensembl chr 5:136,038,496...136,046,487
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
ISO
IMP
(MGI:5461755|PMID:22886301) MGI PMID:22886301 GO_REF:0000096 MGI:4834177 MGI:5461755 NCBI chr17:46,016,993...46,032,377
Ensembl chr17:46,016,993...46,032,369
JBrowse link
G Vegfb vascular endothelial growth factor B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:6,982,472...6,987,651
Ensembl chr19:6,982,473...6,987,651
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within
involved_in
IMP
ISO
(MGI:5429122|PMID:22627278)
(PMID:23338840)
MGI
CAFA
PMID:22627278 PMID:23338840 MGI:5429122 NCBI chr 6:113,623,994...113,631,634
Ensembl chr 6:113,623,959...113,631,633
JBrowse link
G Vps35 VPS35 retromer complex component involved_in IMP (MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:5694519 NCBI chr 8:85,260,385...85,299,517
Ensembl chr 8:85,260,392...85,299,802
JBrowse link
G Wdr35 WD repeat domain 35 involved_in ISO Bcl2, Bcl2l1
Gch1
RGD
MGI
PMID:18671723 PMID:23289926 GO_REF:0000096 MGI:4417868 RGD:11553920 RGD:11553926 NCBI chr12:8,973,998...9,028,848
Ensembl chr12:8,973,892...9,028,847
JBrowse link
G Wnt4 wingless-type MMTV integration site family, member 4 acts_upstream_of_or_within
involved_in
IMP
ISO
(MGI:2178881|PMID:11948913) MGI PMID:11948913 GO_REF:0000096 MGI:2178881 MGI:4834177 NCBI chr 4:137,277,635...137,299,501
Ensembl chr 4:137,277,489...137,299,726
JBrowse link
G Wnt8b wingless-type MMTV integration site family, member 8B acts_upstream_of_or_within IMP (MGI:4413515|PMID:19890917) MGI PMID:19890917 MGI:4413515 NCBI chr19:44,493,472...44,514,273
Ensembl chr19:44,493,472...44,514,273
JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:107,436,334...107,559,290
Ensembl chr 8:107,436,365...107,558,595
JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:73,883,895...73,950,397
Ensembl chr17:73,883,895...73,950,196
JBrowse link
G Yap1 yes-associated protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:7,931,999...8,004,638
Ensembl chr 9:7,931,999...8,004,596
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:108,792,945...108,820,148
Ensembl chr12:108,792,973...108,820,148
JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 involved_in IMP (MGI:5619432|PMID:23776228) CACAO PMID:23776228 MGI:5619432 NCBI chr16:42,875,689...43,634,392
Ensembl chr16:42,875,881...43,642,602
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within IDA (MGI:5450776|PMID:23034280) MGI PMID:23034280 MGI:5450776 NCBI chr 3:89,377,644...89,393,673
Ensembl chr 3:89,377,644...89,394,776
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in IMP
ISO
(MGI:5486545|PMID:18178554) BHF-UCL
MGI
PMID:18178554 GO_REF:0000096 MGI:4834177 MGI:5486545 NCBI chr 4:125,118,414...125,127,881
Ensembl chr 4:125,118,423...125,127,840
JBrowse link
G Zfp148 zinc finger protein 148 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:33,380,775...33,503,903
Ensembl chr16:33,380,836...33,504,363
JBrowse link
G Zfp281 zinc finger protein 281 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:136,624,901...136,630,391
Ensembl chr 1:136,624,901...136,630,053
JBrowse link
G Zfp410 zinc finger protein 410 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:84,316,510...84,344,439
Ensembl chr12:84,316,852...84,343,723
JBrowse link
G Zfp503 zinc finger protein 503 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:21,983,959...21,989,601
Ensembl chr14:21,983,959...21,989,601
JBrowse link
G Zmpste24 zinc metallopeptidase, STE24 acts_upstream_of_or_within IMP (MGI:3789238|PMID:16079796), (MGI:5609934|PMID:23117660) MGI PMID:16079796 PMID:23117660 MGI:3789238 MGI:5609934 NCBI chr 4:121,059,237...121,098,249
Ensembl chr 4:121,059,237...121,098,241
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:37,019,341...37,207,620
Ensembl chr19:37,021,291...37,208,601
JBrowse link
G Dhx36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:62,468,015...62,507,034
Ensembl chr 3:62,468,013...62,507,004
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:36,763,671...36,766,214
Ensembl chr18:36,763,671...36,766,214
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO RGD
MGI
PMID:20805360 GO_REF:0000096 MGI:4417868 RGD:10042974 NCBI chr 5:99,955,935...99,979,130
Ensembl chr 5:99,955,935...99,978,938
JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr17:57,021,049...57,031,507
Ensembl chr17:57,021,051...57,031,522
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:104,794,828...104,818,619
Ensembl chr 3:104,794,836...104,818,563
JBrowse link
G Plekhn1 pleckstrin homology domain containing, family N member 1 involved_in ISO
IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:6105829|PMID:27616329)
MGI
GO_Central
UniProt
PMID:21873635 PMID:27616329 GO_REF:0000096 MGI:4834177 MGI:6105829 MGI:6201960 NCBI chr 4:156,221,456...156,228,542
Ensembl chr 4:156,221,456...156,234,857
JBrowse link
G Qk quaking, KH domain containing RNA binding acts_upstream_of_or_within IDA (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr17:10,206,471...10,319,361
Ensembl chr17:10,202,601...10,319,854
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:46,418,102...46,431,099
Ensembl chr13:46,418,434...46,431,095
JBrowse link
G Rc3h1 RING CCCH (C3H) domains 1 involved_in IDA (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) UniProt PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chr 1:160,906,411...160,974,976
Ensembl chr 1:160,906,418...160,974,978
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:148,612,382...148,627,084
Ensembl chr 4:148,612,382...148,627,019
JBrowse link
G Trim71 tripartite motif-containing 71 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:114,511,268...114,564,369
Ensembl chr 9:114,507,133...114,564,369
JBrowse link
G Upf1 UPF1 regulator of nonsense transcripts homolog (yeast) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:70,331,493...70,353,423
Ensembl chr 8:70,331,525...70,353,278
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO
IBA
IDA
(MGI:6201960|PMID:21873635)
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560), (MGI:5751631|PMID:26255671)
MGI
GO_Central
UniProt
PMID:19322177 PMID:21873635 PMID:23185455 PMID:26000482 PMID:26134560 More... GO_REF:0000096 MGI:3842851 MGI:4834177 MGI:5706859 MGI:5706909 MGI:5707103 MGI:5751631 MGI:6201960 NCBI chr 4:125,118,414...125,127,881
Ensembl chr 4:125,118,423...125,127,840
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in IDA (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chr10:7,832,323...7,870,397
Ensembl chr10:7,832,470...7,870,396
JBrowse link
G Zfp36 zinc finger protein 36 involved_in IMP
ISO
IDA
(MGI:5795824|PMID:17288565)
(MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233)
UniProt
MGI
PMID:17288565 PMID:22701344 PMID:27193233 GO_REF:0000096 MGI:4834177 MGI:5784976 MGI:5788345 MGI:5795824 NCBI chr 7:28,376,784...28,379,228
Ensembl chr 7:28,376,784...28,380,253
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in IDA
IMP
ISO
(MGI:4818820|PMID:20622884), (MGI:5784967|PMID:24733888), (MGI:5784976|PMID:22701344)
(MGI:5779430|PMID:27102483), (MGI:5784968|PMID:24700863)
UniProt
MGI
PMID:20622884 PMID:22701344 PMID:24700863 PMID:24733888 PMID:27102483 GO_REF:0000096 MGI:4818820 MGI:4834177 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 NCBI chr12:80,107,760...80,113,013
Ensembl chr12:80,107,754...80,113,013
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in IDA
ISO
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344) UniProt
MGI
PMID:20622884 PMID:22701344 GO_REF:0000096 MGI:4818820 MGI:4834177 MGI:5784976 NCBI chr17:84,183,924...84,187,947
Ensembl chr17:84,183,931...84,187,947
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 1:190,925,108...190,946,963
Ensembl chr 1:190,925,112...190,946,962
JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 1:55,243,566...55,363,789
Ensembl chr 1:55,248,658...55,363,469
JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr17:50,279,393...50,293,620
Ensembl chr17:50,279,395...50,293,636
JBrowse link
G Elavl1 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) involved_in ISO
IDA
(MGI:6105829|PMID:27616329) MGI
UniProt
PMID:27616329 GO_REF:0000096 MGI:4834177 MGI:6105829 NCBI chr 8:4,284,781...4,325,140
Ensembl chr 8:4,285,382...4,325,413
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:110,203,737...110,351,939
Ensembl chr 4:110,203,722...110,351,909
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in IDA (MGI:5306322|PMID:12456657) UniProt PMID:12456657 MGI:5306322 NCBI chr13:58,125,879...58,128,556
Ensembl chr13:58,125,879...58,128,556
JBrowse link
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) UniProt PMID:16010978 NCBI chr14:52,073,377...52,104,039
Ensembl chr14:52,073,377...52,104,028
JBrowse link
G Mapkapk2 MAP kinase-activated protein kinase 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:131,053,700...131,097,871
Ensembl chr 1:131,053,700...131,097,826
JBrowse link
G Mir466l microRNA 466l acts_upstream_of_or_within IDA (MGI:4457825|PMID:20410487) MGI PMID:20410487 MGI:4457825 NCBI chr 2:10,516,097...10,516,217
Ensembl chr 2:10,516,097...10,516,217
JBrowse link
G Myd88 myeloid differentiation primary response gene 88 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:119,335,934...119,340,018
Ensembl chr 9:119,335,934...119,341,411
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chr10:79,854,432...79,864,435
Ensembl chr10:79,854,427...79,864,771
JBrowse link
G Rbm10 RNA binding motif protein 10 acts_upstream_of_or_within IDA (MGI:4367529|PMID:19508861) MGI PMID:19508861 MGI:4367529 NCBI chr  X:20,617,357...20,650,889
Ensembl chr  X:20,617,503...20,650,901
JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:173,021,891...173,034,734
Ensembl chr 2:173,020,498...173,034,734
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:148,612,382...148,627,084
Ensembl chr 4:148,612,382...148,627,019
JBrowse link
G Tirap toll-interleukin 1 receptor (TIR) domain-containing adaptor protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 9:35,184,391...35,200,291
Ensembl chr 9:35,184,551...35,200,291
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:28,376,784...28,379,228
Ensembl chr 7:28,376,784...28,380,253
JBrowse link
co-transcriptional gene silencing by RNA interference machinery term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chaserr CHD2 adjacent suppressive regulatory RNA involved_in IMP (MGI:5901794|PMID:27783602) MGI PMID:27783602 MGI:5901794 NCBI chr 7:73,539,798...73,558,395
Ensembl chr 7:73,539,801...73,558,395
Ensembl chr 7:73,539,801...73,558,395
Ensembl chr 7:73,539,801...73,558,395
JBrowse link
conversion of ds siRNA to ss siRNA involved in RNA interference term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1, ribonuclease type III involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr12:104,687,740...104,751,968
Ensembl chr12:104,687,742...104,751,952
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csde1 cold shock domain containing E1, RNA binding involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:103,020,431...103,058,186
Ensembl chr 3:103,020,426...103,058,186
JBrowse link
G Dhx9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 1:153,455,756...153,487,688
Ensembl chr 1:153,455,758...153,487,660
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:99,955,935...99,979,130
Ensembl chr 5:99,955,935...99,978,938
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 1:178,321,108...178,338,891
Ensembl chr 1:178,321,108...178,337,797
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:95,957,163...96,005,944
Ensembl chr11:95,957,163...96,005,940
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISO (PMID:11051545) ComplexPortal PMID:11051545 NCBI chr15:36,595,658...36,609,581
Ensembl chr15:36,595,661...36,609,668
JBrowse link
G Paip1 polyadenylate binding protein-interacting protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:119,428,331...119,460,323
Ensembl chr13:119,428,601...119,458,218
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 9:88,449,364...88,482,591
Ensembl chr 9:88,447,009...88,482,574
JBrowse link
G Ybx1 Y box protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:119,277,327...119,296,265
Ensembl chr 4:119,277,981...119,294,604
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex, subunit 7 acts_upstream_of_or_within IMP
IGI
(MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 8:40,492,538...40,515,847
Ensembl chr 8:40,492,540...40,515,847
JBrowse link
G Dcp1a decapping mRNA 1A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:30,479,486...30,527,056
Ensembl chr14:30,479,535...30,527,063
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:119,175,253...119,221,614
Ensembl chr 6:119,175,253...119,221,616
JBrowse link
G Dcp2 decapping mRNA 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr18:44,380,500...44,424,969
Ensembl chr18:44,380,502...44,424,969
JBrowse link
G Dcps decapping enzyme, scavenger involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:35,124,414...35,175,987
Ensembl chr 9:35,124,408...35,176,061
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:25,785,318...25,803,975
Ensembl chr 8:25,785,288...25,803,975
JBrowse link
G Noct nocturnin acts_upstream_of_or_within IGI (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 3:51,224,447...51,251,654
Ensembl chr 3:51,224,447...51,251,644
JBrowse link
G Pan3 PAN3 poly(A) specific ribonuclease subunit acts_upstream_of_or_within IMP (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 5:147,426,208...147,548,501
Ensembl chr 5:147,430,161...147,548,502
JBrowse link
G Patl1 protein associated with topoisomerase II homolog 1 (yeast) involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr19:11,912,399...11,945,096
Ensembl chr19:11,912,399...11,945,091
JBrowse link
G Patl2 protein associated with topoisomerase II homolog 2 (yeast) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:122,120,108...122,186,189
Ensembl chr 2:122,120,108...122,186,189
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcp1a decapping mRNA 1A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr14:30,479,486...30,527,056
Ensembl chr14:30,479,535...30,527,063
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:119,175,253...119,221,614
Ensembl chr 6:119,175,253...119,221,616
JBrowse link
G Edc3 enhancer of mRNA decapping 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:57,708,540...57,750,163
Ensembl chr 9:57,708,540...57,752,499
JBrowse link
G Edc4 enhancer of mRNA decapping 4 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 8:105,880,873...105,893,225
Ensembl chr 8:105,880,881...105,894,908
JBrowse link
DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt1 DNA methyltransferase (cytosine-5) 1 involved_in IDA (MGI:3687778|PMID:10615135) UniProt PMID:10615135 MGI:3687778 NCBI chr 9:20,907,206...20,959,888
Ensembl chr 9:20,907,209...20,959,888
JBrowse link
G Dnmt3a DNA methyltransferase 3A acts_upstream_of_or_within IDA
IGI
(MGI:3611125|PMID:16322236)
(MGI:3768461|PMID:17938196)
MGI PMID:16322236 PMID:17938196 MGI:3611125 MGI:3768461 NCBI chr12:3,801,559...3,914,443
Ensembl chr12:3,806,007...3,914,443
JBrowse link
G Dnmt3b DNA methyltransferase 3B acts_upstream_of_or_within IGI (MGI:3768461|PMID:17938196) MGI PMID:17938196 MGI:3768461 NCBI chr 2:153,649,411...153,687,730
Ensembl chr 2:153,649,450...153,687,730
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 4:129,516,104...129,542,646
Ensembl chr 4:129,516,104...129,542,713
JBrowse link
G Hells helicase, lymphoid specific involved_in IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:3573964|PMID:15647320)
GO_Central
UniProt
PMID:15647320 PMID:21873635 MGI:3573964 MGI:6201960 NCBI chr19:38,930,262...38,970,470
Ensembl chr19:38,930,915...38,971,051
JBrowse link
G Kmt2b lysine (K)-specific methyltransferase 2B acts_upstream_of_or_within IMP (MGI:4849597|PMID:20808952) MGI PMID:20808952 MGI:4849597 NCBI chr 7:30,568,855...30,589,056
Ensembl chr 7:30,568,858...30,588,726
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:70,568,225...70,629,134
Ensembl chr18:70,568,189...70,626,131
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 acts_upstream_of_or_within IDA (MGI:3611125|PMID:16322236) MGI PMID:16322236 MGI:3611125 NCBI chr10:80,392,539...80,399,531
Ensembl chr10:80,392,539...80,399,550
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IDA (MGI:3611125|PMID:16322236) MGI PMID:16322236 MGI:3611125 NCBI chr 9:21,616,106...21,704,230
Ensembl chr 9:21,616,169...21,704,230
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:49,671,497...49,713,401
Ensembl chr11:49,671,503...49,712,723
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 8:40,492,538...40,515,847
Ensembl chr 8:40,492,540...40,515,847
JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:58,092,794...58,118,597
Ensembl chr11:58,104,153...58,118,594
JBrowse link
G Exosc2 exosome component 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:31,670,715...31,681,352
Ensembl chr 2:31,670,715...31,681,349
JBrowse link
G Exosc3 exosome component 3 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732
JBrowse link
G Exosc5 exosome component 5 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:25,659,153...25,668,032
Ensembl chr 7:25,659,164...25,671,368
JBrowse link
G Exosc7 exosome component 7 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:123,113,231...123,136,129
Ensembl chr 9:123,113,215...123,136,129
JBrowse link
G Exosc8 exosome component 8 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:54,728,679...54,735,364
Ensembl chr 3:54,728,678...54,735,393
JBrowse link
G Exosc9 exosome component 9 involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 3:36,552,606...36,565,727
Ensembl chr 3:36,552,606...36,565,727
JBrowse link
gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr14:54,567,469...54,577,661
Ensembl chr14:54,567,472...54,577,558
JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 8:95,718,931...95,808,113
Ensembl chr 8:95,719,451...95,807,464
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:155,819,837...155,826,925
Ensembl chr 2:155,819,832...155,826,925
JBrowse link
G Limd1 LIM domains containing 1 acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 9:123,478,661...123,521,552
Ensembl chr 9:123,478,706...123,521,552
JBrowse link
G Mir100 microRNA 100 acts_upstream_of_or_within IDA (MGI:4822296|PMID:20439489) MGI PMID:20439489 MGI:4822296 NCBI chr 9:41,531,425...41,531,504
Ensembl chr 9:41,531,425...41,531,504
JBrowse link
G Mir101a microRNA 101a acts_upstream_of_or_within ISO (MGI:5475388|PMID:23390134) MGI PMID:23390134 MGI:5475388 NCBI chr 4:101,346,945...101,347,027
Ensembl chr 4:101,346,945...101,347,027
JBrowse link
G Mir101b microRNA 101b acts_upstream_of_or_within ISO (MGI:5475388|PMID:23390134) MGI PMID:23390134 MGI:5475388 NCBI chr19:29,135,279...29,135,375
Ensembl chr19:29,135,279...29,135,375
JBrowse link
G Mir107 microRNA 107 acts_upstream_of_or_within IDA (MGI:5013695|PMID:21415270) MGI PMID:21415270 MGI:5013695 NCBI chr19:34,820,687...34,820,773
Ensembl chr19:34,820,687...34,820,773
JBrowse link
G Mir10a microRNA 10a acts_upstream_of_or_within IDA (MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:3510301 NCBI chr11:96,317,165...96,317,274
Ensembl chr11:96,317,165...96,317,274
JBrowse link
G Mir124-2hg Mir124-2 host gene (non-protein coding) acts_upstream_of_or_within IDA (MGI:5528923|PMID:23946534) MGI PMID:23946534 MGI:5528923 NCBI chr 3:17,789,921...17,800,071
Ensembl chr 3:17,789,921...17,808,970
JBrowse link
G Mir124a-1 microRNA 124a-1 acts_upstream_of_or_within IMP
IDA
(MGI:3706460|PMID:17403776)
(MGI:3706460|PMID:17403776), (MGI:4438512|PMID:19898466), (MGI:5303045|PMID:21857657)
MGI PMID:17403776 PMID:19898466 PMID:21857657 MGI:3706460 MGI:4438512 MGI:5303045 NCBI chr14:64,590,657...64,590,741
Ensembl chr14:64,590,657...64,590,741
JBrowse link
G Mir124a-1hg Mir124-1 host gene (non-protein coding) acts_upstream_of_or_within IDA (MGI:5528923|PMID:23946534) MGI PMID:23946534 MGI:5528923 NCBI chr14:64,588,115...64,593,961
Ensembl chr14:64,587,331...64,593,961
JBrowse link
G Mir124a-2 microRNA 124a-2 acts_upstream_of_or_within IMP
IDA
(MGI:3706460|PMID:17403776)
(MGI:3706460|PMID:17403776), (MGI:4438512|PMID:19898466), (MGI:5303045|PMID:21857657)
MGI PMID:17403776 PMID:19898466 PMID:21857657 MGI:3706460 MGI:4438512 MGI:5303045 NCBI chr 3:17,795,662...17,795,770
Ensembl chr 3:17,795,662...17,795,770
JBrowse link
G Mir124a-3 microRNA 124a-3 acts_upstream_of_or_within IMP
IDA
(MGI:3706460|PMID:17403776)
(MGI:3706460|PMID:17403776), (MGI:4438512|PMID:19898466), (MGI:5303045|PMID:21857657)
MGI PMID:17403776 PMID:19898466 PMID:21857657 MGI:3706460 MGI:4438512 MGI:5303045 NCBI chr 2:180,894,040...180,894,107
Ensembl chr 2:180,894,040...180,894,107
JBrowse link
G Mir125a microRNA 125a acts_upstream_of_or_within IDA (MGI:4438512|PMID:19898466) MGI PMID:19898466 MGI:4438512 NCBI chr17:17,830,812...17,830,879
Ensembl chr17:17,830,812...17,830,879
JBrowse link
G Mir125b-1 microRNA 125b-1 involved_in IMP (MGI:5882697|PMID:28281528) MGI PMID:28281528 MGI:5882697 NCBI chr 9:41,581,926...41,582,002
Ensembl chr 9:41,581,926...41,582,002
JBrowse link
G Mir125b-2 microRNA 125b-2 involved_in IMP (MGI:5882697|PMID:28281528) MGI PMID:28281528 MGI:5882697 NCBI chr16:77,646,273...77,646,343
Ensembl chr16:77,646,273...77,646,343
JBrowse link
G Mir129 microRNA 129 acts_upstream_of_or_within IMP
IDA
(MGI:5514289|PMID:23836929) MGI PMID:23836929 MGI:5514289
G Mir129-1 microRNA 129-1 acts_upstream_of_or_within ISO (MGI:5475388|PMID:23390134) MGI PMID:23390134 MGI:5475388 NCBI chr 6:29,022,619...29,022,691
Ensembl chr 6:29,022,619...29,022,691
JBrowse link
G Mir129-2 microRNA 129-2 acts_upstream_of_or_within ISO (MGI:5475388|PMID:23390134) MGI PMID:23390134 MGI:5475388 NCBI chr 2:94,241,364...94,241,453
Ensembl chr 2:94,241,364...94,241,453
JBrowse link
G Mir133a-1 microRNA 133a-1 acts_upstream_of_or_within IMP (MGI:3820745|PMID:19015276) MGI PMID:19015276 MGI:3820745 NCBI chr18:10,782,909...10,782,976
Ensembl chr18:10,782,909...10,782,976
JBrowse link
G Mir133a-2 microRNA 133a-2 acts_upstream_of_or_within IMP (MGI:3820745|PMID:19015276) MGI PMID:19015276 MGI:3820745 NCBI chr 2:180,398,379...180,398,482
Ensembl chr 2:180,398,379...180,398,482
JBrowse link
G Mir137 microRNA 137 acts_upstream_of_or_within IDA (MGI:4822296|PMID:20439489) MGI PMID:20439489 MGI:4822296 NCBI chr 3:118,433,857...118,433,929
Ensembl chr 3:118,433,857...118,433,929
JBrowse link
G Mir155 microRNA 155 acts_upstream_of_or_within IDA (MGI:4833768|PMID:20548288) MGI PMID:20548288 MGI:4833768 NCBI chr16:84,714,140...84,714,204
Ensembl chr16:84,714,140...84,714,204
JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within IMP (MGI:5140688|PMID:21338882) MGI PMID:21338882 MGI:5140688 NCBI chr14:115,043,671...115,043,754
Ensembl chr14:115,043,671...115,043,754
JBrowse link
G Mir182 microRNA 182 acts_upstream_of_or_within IGI (MGI:6108693|PMID:28819115) MGI PMID:28819115 MGI:6108693 NCBI chr 6:30,165,918...30,165,992
Ensembl chr 6:30,165,918...30,165,992
JBrowse link
G Mir183 microRNA 183 acts_upstream_of_or_within IGI (MGI:6108693|PMID:28819115) MGI PMID:28819115 MGI:6108693 NCBI chr 6:30,169,668...30,169,737
Ensembl chr 6:30,169,668...30,169,737
JBrowse link
G Mir196a-1 microRNA 196a-1 acts_upstream_of_or_within IDA (MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:3510301 NCBI chr11:96,265,164...96,265,265
Ensembl chr11:96,265,164...96,265,265
JBrowse link
G Mir196a-2 microRNA 196a-2 acts_upstream_of_or_within IDA (MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:3510301 NCBI chr15:102,973,350...102,973,434
Ensembl chr15:102,973,350...102,973,434
JBrowse link
G Mir1a-1 microRNA 1a-1 acts_upstream_of_or_within IDA (MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:3510301 NCBI chr 2:180,389,048...180,389,124
Ensembl chr 2:180,389,048...180,389,124
JBrowse link
G Mir1a-2 microRNA 1a-2 acts_upstream_of_or_within IMP
IDA
(MGI:5575655|PMID:17397913)
(MGI:3510301|PMID:15361871)
MGI PMID:15361871 PMID:17397913 MGI:3510301 MGI:5575655 NCBI chr18:10,785,481...10,785,552
Ensembl chr18:10,785,481...10,785,552
JBrowse link
G Mir200a microRNA 200a acts_upstream_of_or_within ISS (MGI:3778596|PMID:18184563) MGI PMID:18184563 MGI:3778596 NCBI chr 4:156,054,896...156,054,985
Ensembl chr 4:156,054,896...156,054,985
JBrowse link
G Mir200b microRNA 200b acts_upstream_of_or_within ISS
IDA
(MGI:3778596|PMID:18184563)
(MGI:5013695|PMID:21415270)
MGI PMID:18184563 PMID:21415270 MGI:3778596 MGI:5013695 NCBI chr 4:156,055,681...156,055,750
Ensembl chr 4:156,055,681...156,055,750
JBrowse link
G Mir203 microRNA 203 acts_upstream_of_or_within IDA (MGI:4946569|PMID:21307095) MGI PMID:21307095 MGI:4946569 NCBI chr12:112,130,880...112,130,955
Ensembl chr12:112,130,880...112,130,955
JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within IMP (MGI:5514438|PMID:23974039) MGI PMID:23974039 MGI:5514438 NCBI chr 1:193,507,463...193,507,530
Ensembl chr 1:193,507,463...193,507,530
JBrowse link
G Mir214 microRNA 214 acts_upstream_of_or_within IDA (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 1:162,223,368...162,223,477
Ensembl chr 1:162,223,368...162,223,477
JBrowse link
G Mir21a microRNA 21a acts_upstream_of_or_within
involved_in
IEP
IDA
(MGI:5693365|PMID:19147652)
(MGI:6208917|PMID:29925839)
MGI PMID:19147652 PMID:29925839 MGI:5693365 MGI:6208917 NCBI chr11:86,584,067...86,584,158
Ensembl chr11:86,584,067...86,584,158
JBrowse link
G Mir21b microRNA 21b involved_in IDA (MGI:6208917|PMID:29925839) MGI PMID:29925839 MGI:6208917 NCBI chr 3:29,636,744...29,636,851
Ensembl chr 3:29,636,744...29,636,851
JBrowse link
G Mir21c microRNA 21c involved_in IDA (MGI:6208917|PMID:29925839) MGI PMID:29925839 MGI:6208917 NCBI chr 8:128,278,148...128,278,225
Ensembl chr 8:128,278,148...128,278,225
JBrowse link
G Mir221 microRNA 221 acts_upstream_of_or_within ISO (MGI:5475388|PMID:23390134) MGI PMID:23390134 MGI:5475388 NCBI chr  X:19,146,294...19,146,388
Ensembl chr  X:19,146,294...19,146,388
JBrowse link
G Mir223 microRNA 223 acts_upstream_of_or_within IMP (MGI:3811177|PMID:18278031) MGI PMID:18278031 MGI:3811177 NCBI chr  X:96,242,817...96,242,926
Ensembl chr  X:96,242,817...96,242,926
JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within IDA (MGI:5516374|PMID:24101522) MGI PMID:24101522 MGI:5516374 NCBI chr 8:84,208,518...84,208,592
Ensembl chr 8:84,208,518...84,208,592
JBrowse link
G Mir26a-1 microRNA 26a-1 acts_upstream_of_or_within IDA (MGI:5494382|PMID:22210897) MGI PMID:22210897 MGI:5494382 NCBI chr 9:119,031,796...119,031,885
Ensembl chr 9:119,031,796...119,031,885
JBrowse link
G Mir26a-2 microRNA 26a-2 acts_upstream_of_or_within IDA (MGI:5494382|PMID:22210897) MGI PMID:22210897 MGI:5494382 NCBI chr10:126,995,530...126,995,613
Ensembl chr10:126,995,530...126,995,613
JBrowse link
G Mir26b microRNA 26b acts_upstream_of_or_within IDA (MGI:5494382|PMID:22210897) MGI PMID:22210897 MGI:5494382 NCBI chr 1:74,394,310...74,394,394
Ensembl chr 1:74,394,310...74,394,394
JBrowse link
G Mir301 microRNA 301 acts_upstream_of_or_within IDA (MGI:5426073|PMID:22517757) MGI PMID:22517757 MGI:5426073 NCBI chr11:87,113,004...87,113,089
Ensembl chr11:87,113,004...87,113,089
JBrowse link
G Mir30a microRNA 30a acts_upstream_of_or_within IMP (MGI:3838679|PMID:19185580) MGI PMID:19185580 MGI:3838679 NCBI chr 1:23,272,269...23,272,339
Ensembl chr 1:23,272,269...23,272,339
JBrowse link
G Mir324 microRNA 324 acts_upstream_of_or_within IDA (MGI:5576401|PMID:24882011) MGI PMID:24882011 MGI:5576401 NCBI chr11:70,012,043...70,012,131
Ensembl chr11:70,012,043...70,012,131
JBrowse link
G Mir34a microRNA 34a acts_upstream_of_or_within IDA
IMP
(MGI:4822296|PMID:20439489), (MGI:5613071|PMID:25043055)
(MGI:5613071|PMID:25043055)
MGI PMID:20439489 PMID:25043055 MGI:4822296 MGI:5613071 NCBI chr 4:150,068,454...150,068,555
Ensembl chr 4:150,068,454...150,068,555
JBrowse link
G Mir3960 microRNA 3960 acts_upstream_of_or_within IMP (MGI:4948784|PMID:21324897) MGI PMID:21324897 MGI:4948784 NCBI chr 2:32,712,900...32,712,972
Ensembl chr 2:32,712,900...32,712,972
JBrowse link
G Mir423 microRNA 423 involved_in IDA (MGI:5922106|PMID:28411267) MGI PMID:28411267 MGI:5922106 NCBI chr11:77,078,064...77,078,172
Ensembl chr11:77,078,064...77,078,172
JBrowse link
G Mir450b microRNA 450b acts_upstream_of_or_within ISO (MGI:5448345|PMID:22367714) MGI PMID:22367714 MGI:5448345 NCBI chr  X:53,047,997...53,048,078
Ensembl chr  X:53,047,997...53,048,078
JBrowse link
G Mir489 microRNA 489 acts_upstream_of_or_within IDA (MGI:5312165|PMID:22358842) MGI PMID:22358842 MGI:5312165 NCBI chr 6:3,721,897...3,722,003
Ensembl chr 6:3,721,897...3,722,003
JBrowse link
G Mir494 microRNA 494 acts_upstream_of_or_within IMP (MGI:5302482|PMID:20837890) MGI PMID:20837890 MGI:5302482 NCBI chr12:109,715,318...109,715,402
Ensembl chr12:109,715,318...109,715,402
JBrowse link
G Mir495 microRNA 495 acts_upstream_of_or_within IDA (MGI:5013695|PMID:21415270) MGI PMID:21415270 MGI:5013695 NCBI chr12:109,718,754...109,718,816
Ensembl chr12:109,718,754...109,718,816
JBrowse link
G Mir504 microRNA 504 involved_in IDA
IMP
(MGI:5921469|PMID:26941017) MGI PMID:26941017 MGI:5921469 NCBI chr  X:59,097,658...59,097,736
Ensembl chr  X:59,097,658...59,097,736
JBrowse link
G Mir511 microRNA 511 acts_upstream_of_or_within IMP (MGI:5486412|PMID:22832163) MGI PMID:22832163 MGI:5486412 NCBI chr 2:14,261,003...14,261,081
Ensembl chr 2:14,261,003...14,261,081
JBrowse link
G Mir668 microRNA 668 acts_upstream_of_or_within IDA (MGI:6276530|PMID:30325740) MGI PMID:30325740 MGI:6276530 NCBI chr12:109,734,732...109,734,797
Ensembl chr12:109,734,732...109,734,797
JBrowse link
G Mir7-1 microRNA 7-1 acts_upstream_of_or_within IDA (MGI:4946569|PMID:21307095) MGI PMID:21307095 MGI:4946569 NCBI chr13:58,392,779...58,392,886
Ensembl chr13:58,392,779...58,392,886
JBrowse link
G Mir7-2 microRNA 7-2 acts_upstream_of_or_within IDA (MGI:4946569|PMID:21307095) MGI PMID:21307095 MGI:4946569 NCBI chr 7:78,888,277...78,888,373
Ensembl chr 7:78,888,277...78,888,373
JBrowse link
G Mir7578 microRNA 7578 acts_upstream_of_or_within IDA
IMP
(MGI:5484830|PMID:23184950) MGI PMID:23184950 MGI:5484830 NCBI chr 2:27,450,549...27,450,630
Ensembl chr 2:27,450,549...27,450,630
JBrowse link
G Mir873a microRNA 873a acts_upstream_of_or_within IMP
ISO
(MGI:6103206|PMID:28837808) MGI PMID:28837808 MGI:6103206 NCBI chr 4:36,668,510...36,668,586
Ensembl chr 4:36,668,510...36,668,586
JBrowse link
G Mir874 microRNA 874 acts_upstream_of_or_within IDA (MGI:5551666|PMID:24462679) MGI PMID:24462679 MGI:5551666 NCBI chr13:58,023,125...58,023,200
Ensembl chr13:58,023,125...58,023,200
JBrowse link
G Mir96 microRNA 96 acts_upstream_of_or_within IGI (MGI:6108693|PMID:28819115) MGI PMID:28819115 MGI:6108693 NCBI chr 6:30,169,446...30,169,551
Ensembl chr 6:30,169,446...30,169,551
JBrowse link
G Mirlet7a-1 microRNA let7a-1 acts_upstream_of_or_within IDA
IGI
(MGI:4438512|PMID:19898466)
(MGI:5461254|PMID:23152446)
MGI PMID:19898466 PMID:23152446 MGI:4438512 MGI:5461254 NCBI chr13:48,538,179...48,538,272
Ensembl chr13:48,538,179...48,538,272
JBrowse link
G Mirlet7a-2 microRNA let7a-2 acts_upstream_of_or_within IGI (MGI:5461254|PMID:23152446) MGI PMID:23152446 MGI:5461254 NCBI chr 9:41,536,716...41,536,811
Ensembl chr 9:41,536,716...41,536,811
JBrowse link
G Mirlet7b microRNA let7b acts_upstream_of_or_within IDA (MGI:5461254|PMID:23152446) MGI PMID:23152446 MGI:5461254 NCBI chr15:85,707,319...85,707,403
Ensembl chr15:85,707,319...85,707,403
JBrowse link
G Mirlet7c-1 microRNA let7c-1 acts_upstream_of_or_within IDA (MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:3510301 NCBI chr16:77,599,657...77,599,750
Ensembl chr16:77,599,657...77,599,750
JBrowse link
G Mirlet7c-2 microRNA let7c-2 acts_upstream_of_or_within IDA (MGI:3510301|PMID:15361871) MGI PMID:15361871 MGI:3510301 NCBI chr15:85,706,603...85,706,697
Ensembl chr15:85,706,603...85,706,697
JBrowse link
G Mirlet7e microRNA let7e acts_upstream_of_or_within IDA (MGI:3510301|PMID:15361871), (MGI:4438512|PMID:19898466) MGI PMID:15361871 PMID:19898466 MGI:3510301 MGI:4438512 NCBI chr17:17,830,352...17,830,444
Ensembl chr17:17,830,352...17,830,444
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 3:104,794,828...104,818,619
Ensembl chr 3:104,794,836...104,818,563
JBrowse link
G Tnrc6a trinucleotide repeat containing 6a involved_in IBA
ISO
(MGI:6201960|PMID:21873635) GO_Central
MGI
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 7:123,031,101...123,195,296
Ensembl chr 7:123,123,885...123,195,296
JBrowse link
G Tnrc6b trinucleotide repeat containing 6b involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr15:80,711,313...80,941,086
Ensembl chr15:80,711,313...80,941,085
JBrowse link
G Tnrc6c trinucleotide repeat containing 6C involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr11:117,653,703...117,763,439
Ensembl chr11:117,654,289...117,763,439
JBrowse link
G Wtip WT1 interacting protein acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr 7:34,109,547...34,133,268
Ensembl chr 7:34,109,543...34,133,268
JBrowse link
gene silencing by RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 3:89,714,469...89,753,455
Ensembl chr 3:89,715,022...89,753,446
JBrowse link
G Ago1 argonaute RISC catalytic subunit 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 4:126,435,012...126,468,707
Ensembl chr 4:126,435,012...126,468,583
JBrowse link
G Ago2 argonaute RISC catalytic subunit 2 involved_in IMP (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr15:73,101,625...73,184,947
Ensembl chr15:73,095,844...73,184,935
JBrowse link
G Ago3 argonaute RISC catalytic subunit 3 acts_upstream_of_or_within
involved_in
IEA UniProt GO_REF:0000002 GO_REF:0000004 MGI:1354194 MGI:2152098 NCBI chr 4:126,326,994...126,431,670
Ensembl chr 4:126,331,704...126,429,556
JBrowse link
G Ago4 argonaute RISC catalytic subunit 4 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 4:126,489,487...126,533,586
Ensembl chr 4:126,489,541...126,533,472
JBrowse link
G Ajuba ajuba LIM protein acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr14:54,567,469...54,577,661
Ensembl chr14:54,567,472...54,577,558
JBrowse link
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 6:18,050,964...18,109,061
Ensembl chr 6:18,050,964...18,109,061
JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 8:95,718,931...95,808,113
Ensembl chr 8:95,719,451...95,807,464
JBrowse link
G Cnot10 CCR4-NOT transcription complex, subunit 10 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 9:114,585,874...114,640,220
Ensembl chr 9:114,585,878...114,640,184
JBrowse link
G Cnot11 CCR4-NOT transcription complex, subunit 11 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 1:39,535,701...39,546,881
Ensembl chr 1:39,534,992...39,546,889
JBrowse link
G Cnot2 CCR4-NOT transcription complex, subunit 2 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr10:116,485,160...116,581,900
Ensembl chr10:116,485,161...116,581,511
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 7:3,645,247...3,661,109
Ensembl chr 7:3,645,268...3,661,109
JBrowse link
G Cnot6 CCR4-NOT transcription complex, subunit 6 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr11:49,671,497...49,713,401
Ensembl chr11:49,671,503...49,712,723
JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 5:96,070,333...96,164,198
Ensembl chr 5:96,070,333...96,164,171
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in IMP (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:40,492,538...40,515,847
Ensembl chr 8:40,492,540...40,515,847
JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr11:58,092,794...58,118,597
Ensembl chr11:58,104,153...58,118,594
JBrowse link
G Cnot9 CCR4-NOT transcription complex, subunit 9 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 1:74,506,036...74,530,842
Ensembl chr 1:74,506,058...74,530,842
JBrowse link
G Ddx17 DEAD box helicase 17 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr15:79,527,696...79,546,764
Ensembl chr15:79,527,736...79,546,741
JBrowse link
G Ddx4 DEAD box helicase 4 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr13:112,598,333...112,652,633
Ensembl chr13:112,598,333...112,652,475
JBrowse link
G Dhx9 DEAH (Asp-Glu-Ala-His) box polypeptide 9 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 1:153,455,756...153,487,688
Ensembl chr 1:153,455,758...153,487,660
JBrowse link
G Dicer1 dicer 1, ribonuclease type III acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr12:104,687,740...104,751,968
Ensembl chr12:104,687,742...104,751,952
JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E member 2 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 1:87,213,911...87,240,488
Ensembl chr 1:87,213,914...87,240,488
JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr11:3,202,343...3,244,588
Ensembl chr11:3,202,392...3,244,588
JBrowse link
G Eri1 exoribonuclease 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 8:35,465,265...35,495,533
Ensembl chr 8:35,465,253...35,496,196
JBrowse link
G Exd1 exonuclease 3'-5' domain containing 1 involved_in IMP (MGI:5751619|PMID:26669262) UniProt PMID:26669262 MGI:5751619 NCBI chr 2:119,516,505...119,547,627
Ensembl chr 2:119,516,505...119,547,627
JBrowse link
G Fkbp6 FK506 binding protein 6 involved_in IMP (MGI:5439219|PMID:22902560) UniProt PMID:22902560 MGI:5439219 NCBI chr 5:135,291,704...135,351,809
Ensembl chr 5:135,291,704...135,350,044
JBrowse link
G Fmr1 FMRP translational regulator 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr  X:68,678,536...68,717,963
Ensembl chr  X:68,678,541...68,717,963
JBrowse link
G Henmt1 HEN1 methyltransferase homolog 1 (Arabidopsis) acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 3:108,939,454...108,979,885
Ensembl chr 3:108,940,059...108,960,774
JBrowse link
G Limd1 LIM domains containing 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 9:123,478,661...123,521,552
Ensembl chr 9:123,478,706...123,521,552
JBrowse link
G Lin28a lin-28 homolog A acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 4:134,003,330...134,019,196
Ensembl chr 4:134,003,330...134,018,841
JBrowse link
G Lin28b lin-28 homolog B acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr10:45,376,617...45,486,314
Ensembl chr10:45,376,620...45,486,395
JBrowse link
G Mael maelstrom spermatogenic transposon silencer involved_in IMP (MGI:3813746|PMID:18694567) UniProt PMID:18694567 MGI:3813746 NCBI chr 1:166,201,385...166,238,744
Ensembl chr 1:166,201,201...166,238,747
JBrowse link
G Morc1 microrchidia 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr16:48,431,237...48,630,905
Ensembl chr16:48,431,237...48,630,900
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 3:104,794,828...104,818,619
Ensembl chr 3:104,794,836...104,818,563
JBrowse link
G Mov10l1 Mov10 like RISC complex RNA helicase 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr15:88,982,891...89,055,152
Ensembl chr15:88,982,909...89,055,152
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 4:46,138,511...46,172,403
Ensembl chr 4:46,138,613...46,172,403
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr16:31,948,546...31,958,472
Ensembl chr16:31,948,513...31,961,781
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in IMP (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr15:36,595,658...36,609,581
Ensembl chr15:36,595,661...36,609,668
JBrowse link
G Piwil1 piwi-like RNA-mediated gene silencing 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 5:128,736,071...128,755,474
Ensembl chr 5:128,702,524...128,755,474
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in IMP (MGI:3709799|PMID:17446352), (MGI:3778312|PMID:18381894), (MGI:3815367|PMID:18922463) UniProt PMID:17446352 PMID:18381894 PMID:18922463 MGI:3709799 MGI:3778312 MGI:3815367 NCBI chr14:70,372,477...70,436,898
Ensembl chr14:70,372,477...70,429,383
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 involved_in IMP (MGI:3708051|PMID:17395546), (MGI:3778312|PMID:18381894), (MGI:3815367|PMID:18922463) UniProt PMID:17395546 PMID:18381894 PMID:18922463 MGI:3708051 MGI:3778312 MGI:3815367 NCBI chr 9:14,701,776...14,740,672
Ensembl chr 9:14,696,230...14,740,733
Ensembl chr 9:14,696,230...14,740,733
JBrowse link
G Prkra protein kinase, interferon inducible double stranded RNA dependent activator acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 2:76,609,215...76,648,220
Ensembl chr 2:76,629,898...76,648,015
JBrowse link
G Rbm4 RNA binding motif protein 4 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr19:4,784,293...4,794,009
Ensembl chr19:4,784,293...4,793,901
JBrowse link
G Snd1 staphylococcal nuclease and tudor domain containing 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 6:28,480,337...28,935,162
Ensembl chr 6:28,475,139...28,935,162
JBrowse link
G Snip1 Smad nuclear interacting protein 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 4:125,066,672...125,074,043
Ensembl chr 4:125,066,672...125,074,042
JBrowse link
G Spocd1 SPOC domain containing 1 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 4:129,928,767...129,957,115
Ensembl chr 4:129,929,249...129,957,115
JBrowse link
G Srrt serrate RNA effector molecule homolog (Arabidopsis) acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 5:137,295,704...137,307,716
Ensembl chr 5:137,295,704...137,307,674
JBrowse link
G Tarbp2 TARBP2, RISC loading complex RNA binding subunit acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr15:102,516,077...102,523,676
Ensembl chr15:102,518,192...102,523,676
JBrowse link
G Tdrd1 tudor domain containing 1 involved_in IMP (MGI:4356231|PMID:19465913) UniProt PMID:19465913 MGI:4356231 NCBI chr19:56,826,171...56,870,012
Ensembl chr19:56,826,209...56,870,012
JBrowse link
G Tdrd12 tudor domain containing 12 involved_in IMP (MGI:5516419|PMID:24067652) UniProt PMID:24067652 MGI:5516419 NCBI chr 7:35,466,941...35,537,784
Ensembl chr 7:35,469,098...35,537,745
JBrowse link
G Tdrd9 tudor domain containing 9 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr12:111,971,488...112,068,854
Ensembl chr12:111,971,559...112,068,854
JBrowse link
G Tdrkh tudor and KH domain containing protein acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 3:94,413,243...94,434,854
Ensembl chr 3:94,413,273...94,434,668
JBrowse link
G Tex15 testis expressed gene 15 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 8:33,516,689...33,592,503
Ensembl chr 8:33,516,738...33,585,582
JBrowse link
G Tnrc6a trinucleotide repeat containing 6a acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 7:123,031,101...123,195,296
Ensembl chr 7:123,123,885...123,195,296
JBrowse link
G Tnrc6b trinucleotide repeat containing 6b involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:80,711,313...80,941,086
Ensembl chr15:80,711,313...80,941,085
JBrowse link
G Tnrc6c trinucleotide repeat containing 6C acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr11:117,653,703...117,763,439
Ensembl chr11:117,654,289...117,763,439
JBrowse link
G Trim71 tripartite motif-containing 71 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 9:114,511,268...114,564,369
Ensembl chr 9:114,507,133...114,564,369
JBrowse link
G Tut4 terminal uridylyl transferase 4 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 4:108,459,410...108,559,415
Ensembl chr 4:108,459,426...108,559,421
JBrowse link
G Wtip WT1 interacting protein acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr 7:34,109,547...34,133,268
Ensembl chr 7:34,109,543...34,133,268
JBrowse link
G Xpo5 exportin 5 acts_upstream_of_or_within IEA UniProt GO_REF:0000004 MGI:1354194 NCBI chr17:46,202,811...46,243,598
Ensembl chr17:46,202,782...46,243,598
JBrowse link
gene silencing by RNA-directed DNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnq1ot1 KCNQ1 overlapping transcript 1 acts_upstream_of_or_within IMP
IDA
(MGI:4830046|PMID:20573698)
(MGI:3054495|PMID:15340049)
MGI PMID:15340049 PMID:20573698 MGI:3054495 MGI:4830046 NCBI chr 7:143,213,111...143,296,547
Ensembl chr 7:143,203,458...143,296,549
JBrowse link
heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bahd1 bromo adjacent homology domain containing 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:118,900,336...118,924,528
Ensembl chr 2:118,900,377...118,924,528
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A acts_upstream_of_or_within IMP
IDA
(MGI:4462332|PMID:20168299)
(MGI:3653583|PMID:16678107)
MGI PMID:16678107 PMID:20168299 MGI:3653583 MGI:4462332 NCBI chr10:128,091,370...128,129,303
Ensembl chr10:128,091,577...128,129,303
JBrowse link
G Bmi1 Bmi1 polycomb ring finger oncogene involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:18,677,018...18,686,629
Ensembl chr 2:18,677,018...18,686,629
JBrowse link
G Cbx3 chromobox 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:51,470,154...51,483,704
Ensembl chr 6:51,470,360...51,483,704
JBrowse link
G Cbx8 chromobox 8 acts_upstream_of_or_within ISS (MGI:1353080|PMID:10721694) MGI PMID:10721694 MGI:1353080 NCBI chr11:119,036,303...119,040,913
Ensembl chr11:119,036,305...119,040,969
JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 5:33,247,723...33,275,004
Ensembl chr 5:33,247,723...33,274,994
JBrowse link
G Eed embryonic ectoderm development involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:89,954,654...89,980,976
Ensembl chr 7:89,954,654...89,980,983
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in IDA (MGI:3820717|PMID:19026781) ARUK-UCL PMID:19026781 MGI:3820717 NCBI chr11:101,191,115...101,226,463
Ensembl chr11:101,191,115...101,226,463
JBrowse link
G H1f0 H1.0 linker histone involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr15:79,028,212...79,030,504
Ensembl chr15:79,028,450...79,030,504
JBrowse link
G H1f9 H1.9 linker histone involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr11:94,967,593...94,968,456
Ensembl chr11:94,967,593...94,968,456
JBrowse link
G H2ab1 H2A.B variant histone 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:117,014,757...117,015,104
Ensembl chr  X:117,014,757...117,015,104
JBrowse link
G H2ab2 H2A.B variant histone 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:116,681,178...116,681,525
Ensembl chr  X:116,681,178...116,681,525
JBrowse link
G H2ab3 H2A.B variant histone 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:120,312,582...120,313,226
Ensembl chr  X:120,312,748...120,313,095
JBrowse link
G H2ac1 H2A clustered histone 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:23,934,437...23,934,913
Ensembl chr13:23,934,462...23,934,851
JBrowse link
G H2ac10 H2A clustered histone 10 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:23,533,875...23,534,378
Ensembl chr13:23,533,906...23,534,304
JBrowse link
G H2ac11 H2A clustered histone 11 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:22,042,478...22,042,949
Ensembl chr13:22,042,460...22,042,944
JBrowse link
G H2ac12 H2A clustered histone 12 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:22,035,122...22,035,643
Ensembl chr13:22,035,164...22,035,568
JBrowse link
G H2ac13 H2A clustered histone 13 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:21,716,412...21,716,859
Ensembl chr13:21,716,422...21,716,814
JBrowse link
G H2ac15 H2A clustered histone 15 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:21,753,377...21,753,912
Ensembl chr13:21,753,435...21,753,827
JBrowse link
G H2ac19 H2A clustered histone 19 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:96,239,779...96,240,374
Ensembl chr 3:96,239,749...96,240,276
JBrowse link
G H2ac20 H2A clustered histone 20 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:96,220,413...96,220,880
Ensembl chr 3:96,220,361...96,220,880
JBrowse link
G H2ac21 H2A clustered histone 21 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:96,219,885...96,220,354
Ensembl chr 3:96,219,865...96,220,308
JBrowse link
G H2ac22 H2A clustered histone 22 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:21,786,774...21,787,248
Ensembl chr13:21,786,826...21,787,218
JBrowse link
G H2ac23 H2A clustered histone 23 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:21,810,367...21,810,918
Ensembl chr13:21,810,465...21,810,944
JBrowse link
G H2ac24 H2A clustered histone 24 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:21,833,024...21,833,475
Ensembl chr13:21,833,026...21,833,507
JBrowse link
G H2ac4 H2A clustered histone 4 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:23,751,088...23,751,592
Ensembl chr13:23,751,126...23,751,598
JBrowse link
G H2ac6 H2A clustered histone 6 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:23,683,473...23,683,959
Ensembl chr13:23,681,467...23,683,948
JBrowse link
G H2ac7 H2A clustered histone 7 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:23,574,381...23,574,915
Ensembl chr13:23,574,381...23,574,952
JBrowse link
G H2ac8 H2A clustered histone 8 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:23,570,663...23,571,220
Ensembl chr13:23,570,517...23,571,220
JBrowse link
G H2aj H2J.A histone involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:136,808,248...136,810,074
Ensembl chr 6:136,808,244...136,810,074
JBrowse link
G H2al1b H2A histone family member L1B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:11,302,432...11,302,921
Ensembl chr  X:11,302,432...11,302,926
JBrowse link
G H2al1e H2A histone family member L1E involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:11,311,934...11,312,427
Ensembl chr  X:11,311,934...11,312,427
JBrowse link
G H2al1f H2A histone family member L1F involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:11,315,158...11,315,475
Ensembl chr  X:11,315,158...11,315,475
JBrowse link
G H2al1j H2A histone family member L1J involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:11,327,822...11,328,151
Ensembl chr  X:11,327,822...11,328,151
JBrowse link
G H2al1k H2A histone family member L1K involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:9,350,599...9,351,137
Ensembl chr  X:9,350,627...9,351,136
JBrowse link
G H2al1m H2A histone family member L1M involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:9,283,764...9,284,288
Ensembl chr  X:9,283,764...9,284,298
JBrowse link
G H2al1n H2A histone family member L1N involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:14,211,148...14,211,657
Ensembl chr  X:14,211,148...14,211,661
JBrowse link
G H2al1o H2A histone family member L1O involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:9,571,960...9,572,391
Ensembl chr  X:9,571,901...9,572,409
JBrowse link
G H2al2a H2A histone family member L2A involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 2:17,996,417...17,996,958
Ensembl chr 2:17,996,417...17,996,958
JBrowse link
G H2al2b H2A histone family member L2B involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  Y:2,720,339...2,720,674
Ensembl chr  Y:2,720,339...2,720,674
JBrowse link
G H2al3 H2A histone family member L3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:9,849,703...9,850,252
Ensembl chr  X:9,849,703...9,850,255
JBrowse link
G H2ap H2A.P histone involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:9,846,947...9,847,500
Ensembl chr  X:9,846,928...9,847,508
JBrowse link
G H2aw H2A.W histone involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:58,954,685...58,955,192
Ensembl chr11:58,954,685...58,956,830
JBrowse link
G H2ax H2A.X variant histone involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:44,334,715...44,336,077
Ensembl chr 9:44,334,694...44,336,077
JBrowse link
G H2az1 H2A.Z variant histone 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 3:137,864,487...137,866,922
Ensembl chr 3:137,864,487...137,866,922
JBrowse link
G H2az2 H2A.Z histone variant 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:6,427,226...6,444,511
Ensembl chr11:6,427,229...6,444,443
JBrowse link
G Hells helicase, lymphoid specific acts_upstream_of_or_within IMP (MGI:3510059|PMID:15448183) MGI PMID:15448183 MGI:3510059 NCBI chr19:38,930,262...38,970,470
Ensembl chr19:38,930,915...38,971,051
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:120,361,268...120,476,469
Ensembl chr10:120,361,275...120,476,469
JBrowse link
G Hotair HOX transcript antisense RNA (non-protein coding) acts_upstream_of_or_within IMP (MGI:5528742|PMID:24075995) MGI PMID:24075995 MGI:5528742 NCBI chr15:102,944,062...102,947,946
Ensembl chr15:102,944,062...102,947,730
JBrowse link
G Kmt2d lysine (K)-specific methyltransferase 2D involved_in IMP (MGI:4849597|PMID:20808952) UniProt PMID:20808952 MGI:4849597 NCBI chr15:98,831,669...98,874,077
Ensembl chr15:98,831,669...98,871,204
JBrowse link
G L3mbtl1 L3MBTL1 histone methyl-lysine binding protein involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 2:162,942,333...162,977,806
Ensembl chr 2:162,943,472...162,974,522
JBrowse link
G Macroh2a1 macroH2A.1 histone involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr13:56,073,622...56,135,626
Ensembl chr13:56,073,619...56,136,361
JBrowse link
G Macroh2a2 macroH2A.2 histone involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:61,738,640...61,784,604
Ensembl chr10:61,738,665...61,784,147
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within IMP (MGI:3530434|PMID:15608638) MGI PMID:15608638 MGI:3530434 NCBI chr  X:74,026,592...74,085,690
Ensembl chr  X:74,026,592...74,135,363
JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 9:90,091,669...90,114,820
Ensembl chr 9:90,091,665...90,114,774
JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:136,732,942...136,743,686
Ensembl chr  X:136,732,942...136,743,690
JBrowse link
G Msl3 MSL complex subunit 3 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:168,651,267...168,674,354
Ensembl chr  X:168,654,117...168,673,898
JBrowse link
G Msl3l2 MSL3 like 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:56,083,835...56,116,880
Ensembl chr10:56,106,917...56,116,880
JBrowse link
G Pcgf1 polycomb group ring finger 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 6:83,077,552...83,080,855
Ensembl chr 6:83,077,869...83,080,855
JBrowse link
G Pcgf2 polycomb group ring finger 2 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:97,688,821...97,702,434
Ensembl chr11:97,688,823...97,700,497
JBrowse link
G Pole3 polymerase (DNA directed), epsilon 3 (p17 subunit) involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:62,523,798...62,525,014
Ensembl chr 4:62,522,649...62,525,068
JBrowse link
G Ppm1d protein phosphatase 1D magnesium-dependent, delta isoform involved_in IDA (MGI:5551345|PMID:24135283) UniProt PMID:24135283 MGI:5551345 NCBI chr11:85,311,254...85,347,071
Ensembl chr11:85,311,244...85,347,066
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr14:73,192,858...73,325,951
Ensembl chr14:73,183,673...73,325,822
JBrowse link
G Rbbp4 retinoblastoma binding protein 4, chromatin remodeling factor involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 4:129,307,100...129,335,370
Ensembl chr 4:129,307,100...129,335,370
JBrowse link
G Rbbp7 retinoblastoma binding protein 7, chromatin remodeling factor involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr  X:162,760,372...162,779,090
Ensembl chr  X:162,760,402...162,779,092
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr10:63,319,005...63,339,035
Ensembl chr10:63,319,005...63,381,704
JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in IDA (MGI:3653583|PMID:16678107) ComplexPortal PMID:16678107 MGI:3653583 NCBI chr 8:80,699,943...80,739,459
Ensembl chr 8:80,698,507...80,739,497
JBrowse link
G Suv39h1 suppressor of variegation 3-9 1 involved_in TAS (MGI:3688024|PMID:11788710) UniProt PMID:11788710 MGI:3688024 NCBI chr  X:8,061,171...8,074,760
Ensembl chr  X:8,061,171...8,074,760
JBrowse link
G Tnp1 transition protein 1 involved_in ISO (PMID:11315969) UniProt PMID:11315969 NCBI chr 1:73,015,074...73,015,899
Ensembl chr 1:73,015,074...73,015,909
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in IDA
IBA