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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of gene expression
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Accession:GO:0010629 term browser browse the term
Definition:Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
Comment:This term covers any process that negatively regulates the rate of production of a mature gene product, and so includes processes that negatively regulate that rate by reducing the level, stability or availability of intermediates in the process of gene expression. For example, it covers any process that reduces the level, stability or availability of mRNA or circRNA for translation and thereby reduces the rate of production of the encoded protein via translation.


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negative regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC2 ATP binding cassette subfamily C member 2 ISO PMID:17437408 ARUK-UCL PMID:17437408 RGD:14929203 NCBI chr10:96,385,534...96,458,571
Ensembl chr10:99,889,160...99,947,270
JBrowse link
G ACACB acetyl-CoA carboxylase beta ISO (MGI:3629477|PMID:12920182) UniProt PMID:12920182 MGI:3629477 NCBI chr12:106,692,668...106,845,490
Ensembl chr12:110,086,374...110,239,847
JBrowse link
G ACE angiotensin I converting enzyme ISO (MGI:5607357|PMID:25017399) BHF-UCL PMID:25017399 MGI:5607357 NCBI chr17:57,556,294...57,577,294
Ensembl chr17:62,702,341...62,733,853
JBrowse link
G ACVR1B activin A receptor type 1B ISO (MGI:5461254|PMID:23152446) MGI PMID:23152446 MGI:5461254 NCBI chr12:36,765,655...36,811,355
Ensembl chr12:37,541,867...37,566,660
JBrowse link
G ACVRL1 activin A receptor like type 1 ISO (MGI:2674189|PMID:12941632) BHF-UCL PMID:12941632 MGI:2674189 NCBI chr12:36,839,869...36,856,351
Ensembl chr12:37,615,888...37,631,691
JBrowse link
G ADAM10 ADAM metallopeptidase domain 10 ISO (PMID:24530397) ARUK-UCL PMID:24530397 NCBI chr15:37,562,930...37,717,175
Ensembl chr15:55,873,606...56,027,188
JBrowse link
G ADIPOR2 adiponectin receptor 2 ISO RGD PMID:29237572 RGD:24922203 NCBI chr12:1,772,426...1,902,070
Ensembl chr12:1,817,620...1,852,251
JBrowse link
G ADNP activity dependent neuroprotector homeobox ISO p53 RGD PMID:15314252 RGD:2312780 NCBI chr20:47,233,696...47,276,075
Ensembl chr20:48,361,043...48,400,387
JBrowse link
G AFF2 AF4/FMR2 family member 2 ISO (MGI:5496978|PMID:23562910) MGI PMID:23562910 MGI:5496978 NCBI chr  X:137,524,106...138,015,114
Ensembl chr  X:147,951,022...148,436,935
JBrowse link
G AGT angiotensinogen ISO (PMID:24296617) BHF-UCL PMID:24296617 NCBI chr 1:206,252,141...206,263,830
Ensembl chr 1:211,279,015...211,291,044
JBrowse link
G AIF1 allograft inflammatory factor 1 ISO 10 proteins, including ADAM3 RGD PMID:16157606 RGD:2313017 NCBI chr 6:31,276,215...31,278,051
Ensembl chr 6:32,166,301...32,168,125
JBrowse link
G AKIRIN2 akirin 2 ISO MKP-1 RGD PMID:18460465 RGD:2306009 NCBI chr 6:85,549,728...85,577,114 JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO (MGI:4881905|PMID:19933931) BHF-UCL PMID:19933931 MGI:4881905 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756
JBrowse link
G ANAPC2 anaphase promoting complex subunit 2 ISO Ppfia1 RGD PMID:17419996 RGD:14696670 NCBI chr 9:108,234,949...108,248,227
Ensembl chr 9:137,204,356...137,217,652
JBrowse link
G ANXA7 annexin A7 ISO (PMID:24007983) UniProtKB PMID:24007983 NCBI chr10:69,923,353...69,962,980
Ensembl chr10:72,381,447...72,420,749
JBrowse link
G APLN apelin ISO (PMID:23263626) BHF-UCL PMID:23263626 NCBI chr  X:118,775,509...118,785,224 JBrowse link
G APOE apolipoprotein E ISO (MGI:6148510|PMID:18377911) ARUK-UCL PMID:18377911 MGI:6148510 NCBI chr19:41,853,669...41,857,252
Ensembl chr19:50,459,906...50,463,490
JBrowse link
G APP amyloid beta precursor protein ISO (PMID:26006083)
(PMID:18234671)
(PMID:22198949), (PMID:27853422), (PMID:28008308), (PMID:29061364)
ARUK-UCL PMID:18234671 PMID:22198949 PMID:26006083 PMID:27853422 PMID:28008308 PMID:29061364 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G ATOH8 atonal bHLH transcription factor 8 ISO (PMID:27780851) BHF-UCL PMID:27780851 NCBI chr2A:85,803,414...85,837,858
Ensembl chr2A:87,352,904...87,362,938
JBrowse link
G ATP2B4 ATPase plasma membrane Ca2+ transporting 4 ISO (PMID:25147342)
(MGI:6368228|PMID:25147342)
ARUK-UCL PMID:25147342 MGI:6368228 NCBI chr 1:179,231,712...179,348,759
Ensembl chr 1:183,580,773...183,639,882
JBrowse link
G AURKA aurora kinase A ISO (PMID:28218735) UniProt PMID:28218735 NCBI chr20:52,707,757...52,730,579
Ensembl chr20:53,994,881...54,017,339
JBrowse link
G AXIN1 axin 1 ISO (MGI:3804621|PMID:18076571) MGI PMID:18076571 MGI:3804621 Ensembl chr16:278,239...337,891 JBrowse link
G BAK1 BCL2 antagonist/killer 1 ISO p16, cyclin D1, COX 2 RGD PMID:18349538 RGD:2316126 NCBI chr 6:33,146,998...33,154,755
Ensembl chr 6:34,255,769...34,263,211
JBrowse link
G BBS2 Bardet-Biedl syndrome 2 ISO (MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) MGI PMID:18317593 PMID:19150989 MGI:3794515 MGI:3836843 NCBI chr16:36,756,699...36,807,652
Ensembl chr16:55,902,945...55,940,053
JBrowse link
G BBS4 Bardet-Biedl syndrome 4 ISO (MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) MGI PMID:18317593 PMID:19150989 MGI:3794515 MGI:3836843 NCBI chr15:51,601,526...51,656,460
Ensembl chr15:70,362,261...70,416,964
JBrowse link
G BCL11A BAF chromatin remodeling complex subunit BCL11A ISO (MGI:4355757|PMID:19657335) MGI PMID:19657335 MGI:4355757 NCBI chr2A:60,552,908...60,655,437
Ensembl chr2A:61,695,613...61,795,800
JBrowse link
G BMP2 bone morphogenetic protein 2 ISO (PMID:28124060)
(MGI:3512872|PMID:15322112)
BHF-UCL
MGI
PMID:15322112 PMID:28124060 MGI:3512872 NCBI chr20:6,765,161...6,777,728
Ensembl chr20:6,546,173...6,558,610
JBrowse link
G BMP4 bone morphogenetic protein 4 ISO (PMID:28124060)
(MGI:2135612|PMID:11493558)
BHF-UCL
MGI
PMID:11493558 PMID:28124060 MGI:2135612 NCBI chr14:34,542,132...34,549,286
Ensembl chr14:52,821,872...52,828,752
JBrowse link
G BRIP1 BRCA1 interacting protein C-terminal helicase 1 ISO RGD PMID:12511571 RGD:11251702 NCBI chr17:55,786,568...55,973,366
Ensembl chr17:60,901,073...61,083,462
JBrowse link
G C1QTNF3 C1q and TNF related 3 ISO (PMID:20952387) UniProtKB PMID:20952387 NCBI chr 5:76,292,679...76,325,064
Ensembl chr 5:81,687,891...81,742,003
JBrowse link
G CCDC3 coiled-coil domain containing 3 ISO (PMID:28827783)
(MGI:6108413|PMID:28827783)
GO_Central
MGI
PMID:28827783 MGI:6108413 NCBI chr10:12,901,592...13,104,528
Ensembl chr10:12,875,678...13,025,280
JBrowse link
G CCN2 cellular communication network factor 2 ISO (MGI:4413658|PMID:18597638) MGI PMID:18597638 MGI:4413658 NCBI chr 6:129,729,572...129,733,113
Ensembl chr 6:133,836,319...133,842,077
JBrowse link
G CCNB1 cyclin B1 ISO c-mos RGD PMID:15291744 RGD:1578405 NCBI chr 5:44,826,103...44,836,832
Ensembl chr 5:46,394,362...46,405,332
JBrowse link
G CCR1 C-C motif chemokine receptor 1 ISO (PMID:21403648) UniProtKB PMID:21403648 NCBI chr 3:46,107,526...46,114,229
Ensembl chr 3:47,214,688...47,215,755
JBrowse link
G CD28 CD28 molecule ISO (PMID:23817958) UniProtKB PMID:23817958 NCBI chr2B:90,938,795...90,971,438
Ensembl chr2B:209,076,388...209,111,213
JBrowse link
G CD34 CD34 molecule ISO (PMID:15969628) UniProtKB PMID:15969628 NCBI chr 1:183,459,028...183,489,583
Ensembl chr 1:188,272,551...188,297,384
JBrowse link
G CD36 CD36 molecule ISO (MGI:4850200|PMID:20978343) BHF-UCL PMID:20978343 MGI:4850200 NCBI chr 7:72,566,478...72,643,517
Ensembl chr 7:86,265,114...86,305,865
JBrowse link
G CD3E CD3e molecule ISO (PMID:23817958) UniProtKB PMID:23817958 NCBI chr11:113,142,200...113,153,928
Ensembl chr11:117,074,041...117,085,625
JBrowse link
G CD46 CD46 molecule ISO (PMID:23086448) UniProtKB PMID:23086448 NCBI chr 1:183,330,423...183,373,916
Ensembl chr 1:188,031,758...188,182,046
JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A ISO (MGI:3617096|PMID:11981756) MGI PMID:11981756 MGI:3617096 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599
JBrowse link
G CELF1 CUGBP Elav-like family member 1 ISO (PMID:27230130) ARUK-UCL PMID:27230130 NCBI chr11:47,415,600...47,515,254
Ensembl chr11:47,967,831...48,008,487
JBrowse link
G CILP cartilage intermediate layer protein ISO (PMID:29167509) BHF-UCL PMID:29167509 NCBI chr15:44,142,312...44,159,395
Ensembl chr15:62,425,780...62,441,214
JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 ISO (PMID:15051727)
PMID:26240138
UniProtKB
BHF-UCL
PMID:15051727 PMID:26240138 RGD:13210532 NCBI chr 6:137,134,142...137,136,550 JBrowse link
G CLDN19 claudin 19 ISO (PMID:27593915) ARUK-UCL PMID:27593915 NCBI chr 1:42,032,999...42,040,006
Ensembl chr 1:43,408,876...43,417,448
JBrowse link
G CLDN3 claudin 3 ISO (PMID:27593915) ARUK-UCL PMID:27593915 Ensembl chr 7:80,924,731...80,925,393 JBrowse link
G CLDN5 claudin 5 ISO (PMID:25323998)
(MGI:6369916|PMID:30734065)
ARUK-UCL PMID:25323998 PMID:30734065 MGI:6369916 NCBI chr22:2,282,215...2,286,724
Ensembl chr22:17,958,182...17,959,093
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 ISO (PMID:25038453) BHF-UCL PMID:25038453 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G CNPY2 canopy FGF signaling regulator 2 ISO (MGI:5427047|PMID:22378787) BHF-UCL PMID:22378787 MGI:5427047 NCBI chr12:32,599,047...32,604,934
Ensembl chr12:32,851,796...32,857,607
JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO RGD PMID:21816899 RGD:10059418 NCBI chr2B:94,762,796...94,836,304
Ensembl chr2B:212,891,261...212,958,130
JBrowse link
G CREB3L1 cAMP responsive element binding protein 3 like 1 ISO (PMID:27121396) BHF-UCL PMID:27121396 NCBI chr11:46,236,384...46,280,145
Ensembl chr11:46,788,561...46,830,246
JBrowse link
G CRH corticotropin releasing hormone ISO Lhb RGD PMID:20663987 RGD:5508201 NCBI chr 8:62,714,721...62,716,979
Ensembl chr 8:64,383,419...64,384,009
JBrowse link
G CRHR2 corticotropin releasing hormone receptor 2 ISO Lhb, Fshb RGD PMID:19193717 RGD:2317015 NCBI chr 7:31,265,619...31,313,902
Ensembl chr 7:31,386,026...31,434,220
JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein ISO (PMID:23959425) ARUK-UCL PMID:23959425 NCBI chr22:3,141,147...3,177,448
Ensembl chr22:19,632,359...19,668,858
JBrowse link
G CRYAB crystallin alpha B ISO (MGI:3758141|PMID:17893660) MGI PMID:17893660 MGI:3758141 NCBI chr11:106,795,406...106,800,019
Ensembl chr11:110,639,442...110,644,272
JBrowse link
G CTCF CCCTC-binding factor ISO (MGI:3852297|PMID:18614575) UniProt PMID:18614575 MGI:3852297 NCBI chr16:47,906,503...47,983,271
Ensembl chr16:67,302,952...67,372,041
JBrowse link
G CTNNB1 catenin beta 1 ISO PMID:23270756
(MGI:3836885|PMID:19122665)
BHF-UCL
ParkinsonsUK-UCL
PMID:19122665 PMID:23270756 MGI:3836885 RGD:13210526 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G CXCL8 C-X-C motif chemokine ligand 8 ISO (PMID:29048659) ARUK-UCL PMID:29048659 NCBI chr 4:50,452,857...50,456,015
Ensembl chr 4:56,286,708...56,288,083
JBrowse link
G DDRGK1 DDRGK domain containing 1 ISO (PMID:23675531) ParkinsonsUK-UCL PMID:23675531 NCBI chr20:3,276,292...3,290,433
Ensembl chr20:3,038,779...3,052,789
JBrowse link
G DGKQ diacylglycerol kinase theta ISO (PMID:24369117) ParkinsonsUK-UCL PMID:24369117 NCBI chr 4:1,075,133...1,090,081
Ensembl chr 4:994,985...1,007,724
JBrowse link
G DICER1 dicer 1, ribonuclease III ISO (PMID:22105995), (PMID:23322395) ARUK-UCL PMID:22105995 PMID:23322395 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940
JBrowse link
G DIP2A disco interacting protein 2 homolog A ISO (PMID:20860622) UniProtKB PMID:20860622 NCBI chr21:32,921,019...33,034,988
Ensembl chr21:46,060,713...46,168,885
JBrowse link
G DLL4 delta like canonical Notch ligand 4 ISO (PMID:23388056) UniProtKB PMID:23388056 NCBI chr15:19,871,584...19,881,817
Ensembl chr15:38,121,574...38,129,471
JBrowse link
G DNMT1 DNA methyltransferase 1 ISO (PMID:27021683)
(MGI:6270117|PMID:29117290)
BHF-UCL
MGI
PMID:27021683 PMID:29117290 MGI:6270117 NCBI chr19:9,681,847...9,745,334
Ensembl chr19:10,342,478...10,406,972
JBrowse link
G DYSF dysferlin ISO (MGI:3775586|PMID:18276788) MGI PMID:18276788 MGI:3775586 NCBI chr2A:71,495,573...71,730,073
Ensembl chr2A:72,994,888...73,228,846
JBrowse link
G EDN1 endothelin 1 ISO PMID:28484848 BHF-UCL PMID:28484848 RGD:13601996 NCBI chr 6:12,076,312...12,142,861
Ensembl chr 6:12,462,718...12,503,545
JBrowse link
G EIF2AK3 eukaryotic translation initiation factor 2 alpha kinase 3 ISO (MGI:5478659|PMID:23152784) MGI PMID:23152784 MGI:5478659 NCBI chr2A:87,688,732...87,759,580
Ensembl chr2A:89,596,833...89,667,468
JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 ISO Arc RGD PMID:17632064 RGD:10044262 NCBI chr17:74,221,793...74,233,738 JBrowse link
G EMILIN1 elastin microfibril interfacer 1 ISO (MGI:5605894|PMID:25056700) BHF-UCL PMID:25056700 MGI:5605894 NCBI chr2A:27,077,551...27,085,437
Ensembl chr2A:27,166,747...27,174,525
JBrowse link
G ENG endoglin ISO (MGI:2674189|PMID:12941632) BHF-UCL PMID:12941632 MGI:2674189 NCBI chr 9:98,934,080...98,973,862
Ensembl chr 9:127,605,608...127,644,641
JBrowse link
G EPM2A EPM2A glucan phosphatase, laforin ISO (MGI:3826692|PMID:18824542) MGI PMID:18824542 MGI:3826692 NCBI chr 6:143,179,097...143,525,223 JBrowse link
G ERP29 endoplasmic reticulum protein 29 ISO (PMID:22064321) ParkinsonsUK-UCL PMID:22064321 NCBI chr12:109,610,692...109,620,390
Ensembl chr12:113,004,125...113,013,674
JBrowse link
G ESR1 estrogen receptor 1 ISO (PMID:21695196) UniProtKB PMID:21695196 NCBI chr 6:149,507,599...149,918,523
Ensembl chr 6:154,317,002...154,631,551
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO Cdkn1c, also known as p57kip2, cyclin-dependent kinase inhibitor 1c RGD PMID:22821416 RGD:7242953 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726
JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 ISO (PMID:23823476) BHF-UCL PMID:23823476 NCBI chr 4:144,660,676...144,874,404
Ensembl chr 4:156,312,274...156,402,351
JBrowse link
G FERMT1 fermitin family member 1 ISO (MGI:5571208|PMID:24681597) CAFA PMID:24681597 MGI:5571208 NCBI chr20:6,063,480...6,120,206
Ensembl chr20:5,856,287...5,902,251
JBrowse link
G FGF19 fibroblast growth factor 19 ISO (PMID:19085950) UniProtKB PMID:19085950 NCBI chr11:64,794,157...64,800,512
Ensembl chr11:68,085,306...68,090,028
JBrowse link
G FGFR1 fibroblast growth factor receptor 1 ISO (MGI:3775898|PMID:18191119)
(MGI:5548021|PMID:24259513)
MGI PMID:18191119 PMID:24259513 MGI:3775898 MGI:5548021 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904
JBrowse link
G FGFR3 fibroblast growth factor receptor 3 ISO (MGI:4437389|PMID:20053668) MGI PMID:20053668 MGI:4437389 NCBI chr 4:1,933,172...1,948,742 JBrowse link
G FGFR4 fibroblast growth factor receptor 4 ISO (MGI:5548021|PMID:24259513) MGI PMID:24259513 MGI:5548021 NCBI chr 5:172,386,443...172,400,271
Ensembl chr 5:179,454,995...179,467,605
JBrowse link
G FLCN folliculin ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chr17:34,057,127...34,081,637
Ensembl chr17:38,988,518...39,013,160
JBrowse link
G FLOT2 flotillin 2 ISO (PMID:24612608) UniProtKB PMID:24612608 NCBI chr17:27,876,424...27,894,836
Ensembl chr17:28,385,191...28,405,585
JBrowse link
G FMR1 FMRP translational regulator 1 ISO (MGI:5473740|PMID:23235829) RGD
UniProt
PMID:23235829 PMID:24338128 MGI:5473740 RGD:11667958 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G FOXO1 forkhead box O1 ISO (PMID:24280217) AgBase PMID:24280217 NCBI chr13:21,763,729...21,874,279 JBrowse link
G FOXP1 forkhead box P1 ISO (PMID:30111844) ARUK-UCL PMID:30111844 NCBI chr 3:70,893,933...71,523,892
Ensembl chr 3:72,258,456...72,498,173
JBrowse link
G FOXP3 forkhead box P3 ISO (MGI:5569680|PMID:24501220) MGI PMID:24501220 MGI:5569680 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029
JBrowse link
G FYN FYN proto-oncogene, Src family tyrosine kinase ISO (MGI:4850200|PMID:20978343) BHF-UCL PMID:20978343 MGI:4850200 NCBI chr 6:109,469,750...109,684,086
Ensembl chr 6:113,545,944...113,604,451
JBrowse link
G GAS2L1 growth arrest specific 2 like 1 ISO (PMID:19375645) UniProtKB PMID:19375645 NCBI chr22:10,362,391...10,368,173
Ensembl chr22:28,169,387...28,175,278
JBrowse link
G GATA2 GATA binding protein 2 ISO (PMID:27780851) BHF-UCL PMID:27780851 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035
JBrowse link
G GATA3 GATA binding protein 3 ISO (MGI:3708031|PMID:17357106) MGI PMID:17357106 MGI:3708031 NCBI chr10:8,075,951...8,105,573
Ensembl chr10:8,064,207...8,086,272
JBrowse link
G GATA4 GATA binding protein 4 ISO (MGI:5780531|PMID:25590961) BHF-UCL PMID:25590961 MGI:5780531 NCBI chr 8:7,442,921...7,526,731 JBrowse link
G GGNBP2 gametogenetin binding protein 2 ISO (MGI:5779255|PMID:26764350) MGI PMID:26764350 MGI:5779255 NCBI chr17:20,491,687...20,537,516
Ensembl chr17:20,786,936...20,831,055
JBrowse link
G GJA1 gap junction protein alpha 1 ISO (MGI:3849919|PMID:19439426) MGI PMID:19439426 MGI:3849919 NCBI chr 6:119,213,513...119,227,617 JBrowse link
G HAND2 heart and neural crest derivatives expressed 2 ISO (PMID:24161931) BHF-UCL PMID:24161931 NCBI chr 4:165,755,000...165,758,735 JBrowse link
G HAVCR2 hepatitis A virus cellular receptor 2 ISO (PMID:25578313) UniProtKB PMID:25578313 NCBI chr 5:152,486,125...152,514,004
Ensembl chr 5:159,108,915...159,131,007
JBrowse link
G HDAC1 histone deacetylase 1 ISO (PMID:16581785) CACAO PMID:16581785 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410
JBrowse link
G HDAC5 histone deacetylase 5 ISO (MGI:5569711|PMID:23926128) MGI PMID:23926128 MGI:5569711 NCBI chr17:13,273,052...13,319,695
Ensembl chr17:13,446,836...13,479,140
JBrowse link
G HDAC8 histone deacetylase 8 ISO Stx1a RGD PMID:28559304 RGD:13208603 NCBI chr  X:61,565,790...61,811,588 JBrowse link
G HES1 hes family bHLH transcription factor 1 ISO RGD PMID:19670267 RGD:9685170 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 ISO (MGI:5427763|PMID:22615585)
(MGI:3604167|PMID:16025100)
MGI
BHF-UCL
PMID:16025100 PMID:22615585 MGI:3604167 MGI:5427763 NCBI chr 8:76,286,433...76,290,507
Ensembl chr 8:77,913,761...77,921,201
JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 ISO (MGI:3604167|PMID:16025100), (MGI:5427763|PMID:22615585)
(MGI:4454633|PMID:20382855)
MGI PMID:16025100 PMID:20382855 PMID:22615585 MGI:3604167 MGI:4454633 MGI:5427763 NCBI chr 6:123,527,180...123,538,794
Ensembl chr 6:127,647,547...127,659,056
JBrowse link
G HEYL hes related family bHLH transcription factor with YRPW motif like ISO (MGI:5427763|PMID:22615585) MGI PMID:22615585 MGI:5427763 NCBI chr 1:38,913,549...38,929,798
Ensembl chr 1:40,240,118...40,256,933
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO (PMID:26879375) BHF-UCL PMID:26879375 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885
JBrowse link
G HINFP histone H4 transcription factor ISO (PMID:15541338), (PMID:17974976) UniProtKB PMID:15541338 PMID:17974976 NCBI chr11:113,959,670...113,973,781
Ensembl chr11:117,888,855...117,902,184
JBrowse link
G HMGB2 high mobility group box 2 ISO (MGI:5490149|PMID:23495099) AgBase PMID:23495099 MGI:5490149 NCBI chr 4:165,559,848...165,562,625
Ensembl chr 4:177,797,457...177,800,952
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO Mmp9 RGD PMID:16683234 RGD:10042976 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K ISO Orm1 RGD PMID:9553145 RGD:2303817 NCBI chr 9:40,898,593...40,911,159
Ensembl chr 9:83,324,238...83,336,756
JBrowse link
G HRAS HRas proto-oncogene, GTPase ISO (PMID:23027131) BHF-UCL PMID:23027131 NCBI chr11:537,488...540,810
Ensembl chr11:568,305...571,078
JBrowse link
G HSF1 heat shock transcription factor 1 ISO Igf2r RGD PMID:24786827 RGD:10402547 NCBI chr 8:141,055,310...141,078,360
Ensembl chr 8:144,062,137...144,067,866
JBrowse link
G HSPA4 heat shock protein family A (Hsp70) member 4 ISO Tnf, Il1b, Icam1, Nos2 RGD PMID:17473852 RGD:5688754 NCBI chr 5:128,463,186...128,517,563
Ensembl chr 5:134,619,076...134,673,658
JBrowse link
G ID1 inhibitor of DNA binding 1, HLH protein ISO (MGI:4453908|PMID:20231428) MGI PMID:20231428 MGI:4453908 NCBI chr20:27,895,177...27,896,414
Ensembl chr20:28,535,582...28,536,311
JBrowse link
G ID2 inhibitor of DNA binding 2 ISO p21
(MGI:4412240|PMID:18474814)
RGD
UniProt
PMID:11706002 PMID:18474814 MGI:4412240 RGD:619536 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720
JBrowse link
G ID3 inhibitor of DNA binding 3, HLH protein ISO (MGI:5512805|PMID:23523789) MGI PMID:23523789 MGI:5512805 NCBI chr 1:22,748,714...22,750,582
Ensembl chr 1:23,734,263...23,736,175
JBrowse link
G IFNG interferon gamma ISO (PMID:23817958)
(MGI:6304699|PMID:29061364)
UniProtKB
ARUK-UCL
PMID:23817958 PMID:29061364 MGI:6304699 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G IGF1 insulin like growth factor 1 ISO (PMID:29167509)
(MGI:4881905|PMID:19933931)
BHF-UCL PMID:19933931 PMID:29167509 MGI:4881905 NCBI chr12:99,986,887...100,066,773 JBrowse link
G IL1B interleukin 1 beta ISO Nr2e1 RGD PMID:23168994 RGD:7175538 NCBI chr2A:89,216,313...89,223,358
Ensembl chr2A:113,846,306...113,853,424
JBrowse link
G INPPL1 inositol polyphosphate phosphatase like 1 ISO (MGI:3528799|PMID:15654325) MGI PMID:15654325 MGI:3528799 NCBI chr11:67,302,066...67,317,785
Ensembl chr11:70,527,017...70,540,846
JBrowse link
G INSR insulin receptor ISO SOCS3 levels in hypothalamus RGD PMID:17585961 RGD:2290473 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889
JBrowse link
G IQGAP3 IQ motif containing GTPase activating protein 3 ISO (MGI:3835718|PMID:18604197) MGI PMID:18604197 MGI:3835718 NCBI chr 1:131,869,002...131,916,554
Ensembl chr 1:135,695,602...135,740,564
JBrowse link
G ITGB8 integrin subunit beta 8 ISO (PMID:24312400) UniProtKB PMID:24312400 NCBI chr 7:21,019,917...21,105,143
Ensembl chr 7:20,336,031...20,415,666
JBrowse link
G KDM2A lysine demethylase 2A ISO (MGI:5615026|PMID:25463925) MGI PMID:25463925 MGI:5615026 NCBI chr11:62,470,549...62,616,135
Ensembl chr11:65,793,464...65,930,498
JBrowse link
G KDM4A lysine demethylase 4A ISO (PMID:25660547) ParkinsonsUK-UCL PMID:25660547 NCBI chr 1:42,949,977...43,005,684 JBrowse link
G KDR kinase insert domain receptor ISO (PMID:26879375) BHF-UCL PMID:26879375 NCBI chr 4:68,813,894...68,861,018
Ensembl chr 4:75,377,375...75,427,109
JBrowse link
G KEAP1 kelch like ECH associated protein 1 ISO NQO1 RGD PMID:11439354 PMID:20026152 RGD:6902900 RGD:727319 NCBI chr19:10,037,544...10,055,091
Ensembl chr19:10,701,303...10,717,604
JBrowse link
G KLF4 Kruppel like factor 4 ISO (PMID:22267480) BHF-UCL PMID:22267480 NCBI chr 9:78,634,545...78,639,447
Ensembl chr 9:106,820,954...106,825,797
JBrowse link
G KPNA7 karyopherin subunit alpha 7 ISO (MGI:5913752|PMID:20699224) MGI PMID:20699224 MGI:5913752 NCBI chr 7:91,141,586...91,177,628
Ensembl chr 7:104,645,887...104,680,568
JBrowse link
G L3MBTL2 L3MBTL histone methyl-lysine binding protein 2 ISO (MGI:5700289|PMID:22770845) MGI PMID:22770845 MGI:5700289 NCBI chr22:22,102,348...22,128,351
Ensembl chr22:40,193,492...40,218,925
JBrowse link
G LDLR low density lipoprotein receptor ISO (MGI:5659826|PMID:24255059) BHF-UCL PMID:24255059 MGI:5659826 NCBI chr19:10,640,225...10,683,728
Ensembl chr19:11,357,311...11,396,791
JBrowse link
G LGALS9 galectin 9 ISO (PMID:23408620)
(MGI:5491117|PMID:23408620)
(PMID:25578313)
UniProtKB
UniProt
PMID:23408620 PMID:25578313 MGI:5491117 NCBI chr17:29,125,460...29,145,028
Ensembl chr17:29,623,398...29,642,959
JBrowse link
G LGMN legumain ISO (PMID:21237226) ARUK-UCL PMID:21237226 NCBI chr14:73,337,607...73,383,462
Ensembl chr14:92,677,608...92,723,051
JBrowse link
G LOC100967334 G-protein coupled estrogen receptor 1 ISO (PMID:23840305)
PMID:23907461
AgBase
UniProt
PMID:23840305 PMID:23907461 RGD:8553942 NCBI chr 7:1,245,873...1,251,915 JBrowse link
G LOC100972354 interferon alpha-2 ISO (PMID:20554961) UniProtKB PMID:20554961 NCBI chr 9:21,245,017...21,246,210
Ensembl chr 9:21,863,062...21,863,736
JBrowse link
G LOC100972387 DNA-directed RNA polymerases I, II, and III subunit RPABC2 ISO PMID:24749734 ParkinsonsUK-UCL PMID:24749734 RGD:10047218 NCBI chr22:18,868,872...18,988,918
Ensembl chr22:36,796,015...36,814,469
Ensembl chr22:36,796,015...36,814,469
JBrowse link
G LOC100977025 dual specificity mitogen-activated protein kinase kinase 2 ISO (PMID:23626836)
PMID:28947594
UniProtKB
BHF-UCL
PMID:23626836 PMID:28947594 RGD:13524616 NCBI chr19:3,114,445...3,148,619
Ensembl chr19:4,064,626...4,097,933
JBrowse link
G LRP3 LDL receptor related protein 3 ISO (PMID:28340487) ARUK-UCL PMID:28340487 NCBI chr19:30,116,649...30,129,964
Ensembl chr19:38,863,504...38,876,299
JBrowse link
G MAEL maelstrom spermatogenic transposon silencer ISO (MGI:3813746|PMID:18694567) MGI PMID:18694567 MGI:3813746 NCBI chr 1:142,341,646...142,442,521
Ensembl chr 1:146,195,482...146,228,669
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO (PMID:23626836)
PMID:28947594
UniProtKB
BHF-UCL
PMID:23626836 PMID:28947594 RGD:13524616 NCBI chr15:45,337,117...45,438,826
Ensembl chr15:63,613,961...63,714,161
JBrowse link
G MAPT microtubule associated protein tau ISO (PMID:23164821) ARUK-UCL PMID:23164821 NCBI chr17:11,373,220...11,506,669
Ensembl chr17:11,458,159...11,523,129
JBrowse link
G MAX MYC associated factor X ISO RGD PMID:7791753 RGD:2316831 NCBI chr14:45,588,366...45,683,828
Ensembl chr14:64,535,120...64,562,671
JBrowse link
G MBD1 methyl-CpG binding domain protein 1 ISO Gfap RGD PMID:16881068 RGD:9588644 NCBI chr18:43,647,395...43,662,266
Ensembl chr18:46,996,905...47,009,831
JBrowse link
G MDM2 MDM2 proto-oncogene ISO p53 RGD PMID:19850968 RGD:2317361 NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278
JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO Bdnf
(PMID:23960241)
RGD
BHF-UCL
PMID:19217433 PMID:23960241 RGD:11069822 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854
JBrowse link
G MEF2C myocyte enhancer factor 2C ISO (MGI:3830899|PMID:16680724) UniProt PMID:16680724 MGI:3830899 NCBI chr 5:26,480,489...26,650,813
Ensembl chr 5:26,681,700...26,786,426
JBrowse link
G MET MET proto-oncogene, receptor tyrosine kinase ISO (MGI:5529574|PMID:23994610) MGI PMID:23994610 MGI:5529574 NCBI chr 7:108,646,278...108,772,238
Ensembl chr 7:121,365,438...121,468,159
JBrowse link
G MIF macrophage migration inhibitory factor ISO (PMID:10562313) BHF-UCL PMID:10562313 NCBI chr22:4,646,986...4,647,831
Ensembl chr22:22,730,807...22,732,009
JBrowse link
G MKKS McKusick-Kaufman syndrome ISO (MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) MGI PMID:18317593 PMID:19150989 MGI:3794515 MGI:3836843 NCBI chr20:10,346,252...10,380,180
Ensembl chr20:10,351,309...10,366,863
JBrowse link
G MMP8 matrix metallopeptidase 8 ISO (MGI:6201889|PMID:25049354) ARUK-UCL PMID:25049354 MGI:6201889 NCBI chr11:97,650,408...97,663,731
Ensembl chr11:101,143,268...101,156,736
JBrowse link
G MORC1 MORC family CW-type zinc finger 1 ISO (MGI:5700272|PMID:26275923) MGI PMID:26275923 MGI:5700272 NCBI chr 3:106,091,990...106,251,790
Ensembl chr 3:113,021,874...113,180,331
JBrowse link
G MSR1 macrophage scavenger receptor 1 ISO (MGI:5902691|PMID:11240025) ARUK-UCL PMID:11240025 MGI:5902691 NCBI chr 8:15,335,795...15,421,472
Ensembl chr 8:12,088,873...12,175,927
JBrowse link
G MUSK muscle associated receptor tyrosine kinase ISO epsilon-acetylcholine receptor RGD PMID:15604144 RGD:2317103 NCBI chr 9:81,814,766...81,947,341
Ensembl chr 9:109,980,748...110,107,480
JBrowse link
G MYADM myeloid associated differentiation marker ISO (PMID:23264465) UniProtKB PMID:23264465 NCBI chr19:50,807,615...50,817,196
Ensembl chr19:59,663,790...59,664,758
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO Adipor1 RGD PMID:23349663 RGD:7207857 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G MYCN MYCN proto-oncogene, bHLH transcription factor ISO (PMID:21796614) BHF-UCL PMID:21796614 NCBI chr2A:15,925,130...15,931,605 JBrowse link
G MYT1 myelin transcription factor 1 ISO (MGI:3763794|PMID:17928203) MGI PMID:17928203 MGI:3763794 Ensembl chr20:62,108,924...62,151,936 JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO transcript levels RGD PMID:19608741 RGD:5688288 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NDFIP1 Nedd4 family interacting protein 1 ISO (PMID:18776082) UniProtKB PMID:18776082 NCBI chr 5:137,467,161...137,511,569
Ensembl chr 5:143,600,789...143,622,913
JBrowse link
G NDFIP2 Nedd4 family interacting protein 2 ISO (PMID:18776082) UniProtKB PMID:18776082 NCBI chr13:60,717,590...60,792,373
Ensembl chr13:79,745,362...79,820,286
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 ISO (PMID:26687115) BHF-UCL PMID:26687115 NCBI chr 4:94,925,048...95,040,849
Ensembl chr 4:105,589,062...105,704,098
JBrowse link
G NKX3-1 NK3 homeobox 1 ISO (PMID:17486276) UniProtKB PMID:17486276 NCBI chr 8:22,926,145...22,930,396
Ensembl chr 8:19,863,275...19,864,942
JBrowse link
G NME1 NME/NM23 nucleoside diphosphate kinase 1 ISO Mmp2 RGD PMID:12010125 RGD:633207 NCBI chr17:45,243,588...45,252,135
Ensembl chr17:50,113,622...50,131,636
JBrowse link
G NOCT nocturnin ISO (MGI:4837993|PMID:20685873) UniProt PMID:20685873 MGI:4837993 NCBI chr 4:131,378,656...131,409,711
Ensembl chr 4:142,691,169...142,719,514
JBrowse link
G NOG noggin ISO (MGI:5051994|PMID:21624478) MGI PMID:21624478 MGI:5051994 NCBI chr17:50,669,186...50,671,081
Ensembl chr17:55,532,394...55,533,092
JBrowse link
G NOS2 nitric oxide synthase 2 ISO (PMID:12085352)
(MGI:5319619|PMID:12085352)
UniProtKB
UniProt
PMID:12085352 MGI:5319619 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093
JBrowse link
G NOTCH1 notch receptor 1 ISO (PMID:11306509) UniProtKB PMID:11306509 NCBI chr 9:107,568,670...107,621,032
Ensembl chr 9:136,544,639...136,598,740
JBrowse link
G NOTCH2 notch receptor 2 ISO (PMID:11306509) UniProtKB PMID:11306509 NCBI chr 1:82,457,829...82,615,142
Ensembl chr 1:117,538,243...117,612,840
JBrowse link
G NPM1 nucleophosmin 1 ISO (MGI:3805393|PMID:18625840) MGI PMID:18625840 MGI:3805393 NCBI chr 5:166,735,904...166,756,321
Ensembl chr 5:173,490,197...173,510,656
JBrowse link
G NR0B2 nuclear receptor subfamily 0 group B member 2 ISO (PMID:19085950) UniProtKB PMID:19085950 NCBI chr 1:26,174,055...26,176,689
Ensembl chr 1:27,230,362...27,232,942
JBrowse link
G NR1H2 nuclear receptor subfamily 1 group H member 2 ISO RGD PMID:7971966 RGD:61674 NCBI chr19:47,340,077...47,346,737
Ensembl chr19:56,243,124...56,250,024
JBrowse link
G NRXN1 neurexin 1 ISO (PMID:26078884) ARUK-UCL PMID:26078884 NCBI chr2A:50,063,398...51,178,659
Ensembl chr2A:50,985,067...52,091,277
JBrowse link
G OCLN occludin ISO (PMID:21415414)
(MGI:6368048|PMID:21415414)
ARUK-UCL PMID:21415414 MGI:6368048 NCBI chr 5:44,447,230...44,509,637
Ensembl chr 5:46,023,437...46,069,342
JBrowse link
G OLR1 oxidized low density lipoprotein receptor 1 ISO PMID:28108289 BHF-UCL PMID:28108289 RGD:13464258 NCBI chr12:10,196,712...10,210,432
Ensembl chr12:10,445,202...10,461,071
JBrowse link
G OPRD1 opioid receptor delta 1 ISO (PMID:24613828) ParkinsonsUK-UCL PMID:24613828 NCBI chr 1:28,068,053...28,143,053
Ensembl chr 1:29,112,152...29,163,464
JBrowse link
G OVOL2 ovo like zinc finger 2 ISO (MGI:6284898|PMID:28455959) ARUK-UCL PMID:28455959 MGI:6284898 NCBI chr20:17,983,277...18,019,441
Ensembl chr20:17,962,123...17,994,486
JBrowse link
G PARK7 Parkinsonism associated deglycase ISO (PMID:22683601) ParkinsonsUK-UCL PMID:22683601 NCBI chr 1:6,722,260...6,745,915
Ensembl chr 1:7,969,280...7,993,271
JBrowse link
G PARP10 poly(ADP-ribose) polymerase family member 10 ISO (PMID:23575687) UniProtKB PMID:23575687 NCBI chr 8:140,743,061...140,744,014
Ensembl chr 8:143,735,819...143,744,138
JBrowse link
G PARP14 poly(ADP-ribose) polymerase family member 14 ISO (PMID:27796300) UniProtKB PMID:27796300 NCBI chr 3:119,773,334...119,823,732
Ensembl chr 3:126,677,868...126,728,256
JBrowse link
G PARP9 poly(ADP-ribose) polymerase family member 9 ISO (PMID:27796300) UniProtKB PMID:27796300 NCBI chr 3:119,617,722...119,655,039
Ensembl chr 3:126,522,859...126,559,647
JBrowse link
G PAWR pro-apoptotic WT1 regulator ISO (MGI:5648604|PMID:25472717) BHF-UCL PMID:25472717 MGI:5648604 NCBI chr12:77,114,282...77,224,116
Ensembl chr12:79,969,517...80,070,796
JBrowse link
G PC pyruvate carboxylase ISO (PMID:23861867) AgBase PMID:23861867 NCBI chr11:62,205,644...62,317,917
Ensembl chr11:65,527,662...65,551,396
JBrowse link
G PDCD10 programmed cell death 10 ISO (PMID:23388056) UniProtKB PMID:23388056 NCBI chr 3:164,703,909...164,755,085
Ensembl chr 3:172,760,923...172,811,430
JBrowse link
G PDGFB platelet derived growth factor subunit B ISO (PMID:23554459), (PMID:25089138) BHF-UCL PMID:23554459 PMID:25089138 NCBI chr22:20,127,223...20,148,407
Ensembl chr22:37,944,018...37,964,883
JBrowse link
G PGR progesterone receptor ISO (PMID:21695196) UniProtKB PMID:21695196 NCBI chr11:95,997,677...96,098,866 JBrowse link
G PIAS3 protein inhibitor of activated STAT 3 ISO (MGI:3836131|PMID:17442941) MGI PMID:17442941 MGI:3836131 NCBI chr 1:121,900,224...121,911,513
Ensembl chr 1:113,758,691...113,768,714
JBrowse link
G PICALM phosphatidylinositol binding clathrin assembly protein ISO (PMID:22952941) Alzheimers_University_of_Toronto PMID:22952941 NCBI chr11:81,011,324...81,122,352
Ensembl chr11:84,619,241...84,730,684
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 3:176,182,765...176,272,024
Ensembl chr 3:184,355,785...184,441,977
JBrowse link
G PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta ISO PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 1:8,418,570...8,495,435
Ensembl chr 1:9,686,208...9,724,633
JBrowse link
G PINK1 PTEN induced kinase 1 ISO PMID:24475098
(MGI:5582017|PMID:24475098)
ParkinsonsUK-UCL PMID:24475098 MGI:5582017 RGD:10047288 NCBI chr 1:19,583,330...19,601,248
Ensembl chr 1:20,627,693...20,645,560
JBrowse link
G PLA2G3 phospholipase A2 group III ISO (PMID:26637123)
(MGI:5912601|PMID:26637123)
MGI PMID:26637123 MGI:5912601 RGD:11342276 NCBI chr22:12,158,589...12,164,441
Ensembl chr22:29,995,364...30,001,160
JBrowse link
G PLAG1 PLAG1 zinc finger ISO (MGI:5285167|PMID:19808959) UniProt PMID:19808959 MGI:5285167 NCBI chr 8:52,607,398...52,657,808
Ensembl chr 8:49,983,627...50,028,591
JBrowse link
G PMP22 peripheral myelin protein 22 ISO (MGI:5517729|PMID:23847051) MGI PMID:23847051 MGI:5517729 NCBI chr17:36,389,549...36,425,161
Ensembl chr17:41,038,302...41,073,872
JBrowse link
G POU2F1 POU class 2 homeobox 1 ISO PMID:28108289 BHF-UCL PMID:28108289 RGD:13464258 NCBI chr 1:142,653,296...142,860,572
Ensembl chr 1:146,439,581...146,633,921
JBrowse link
G POU3F2 POU class 3 homeobox 2 ISO (MGI:5449484|PMID:23069940) CACAO PMID:23069940 MGI:5449484 NCBI chr 6:96,677,651...96,682,145 JBrowse link
G POU4F1 POU class 4 homeobox 1 ISO (MGI:6158788|PMID:28594399) ARUK-UCL PMID:28594399 MGI:6158788 NCBI chr13:59,821,614...59,829,671 JBrowse link
G POU5F1 POU class 5 homeobox 1 ISO (MGI:5490149|PMID:23495099) AgBase PMID:23495099 MGI:5490149 NCBI chr 6:30,910,421...30,916,465
Ensembl chr 6:31,775,343...31,781,426
JBrowse link
G PPP3CA protein phosphatase 3 catalytic subunit alpha ISO (MGI:5562625|PMID:24161931) BHF-UCL PMID:24161931 MGI:5562625 NCBI chr 4:93,447,095...93,770,339
Ensembl chr 4:104,113,520...104,435,394
JBrowse link
G PRDM1 PR/SET domain 1 ISO (MGI:5014435|PMID:21670299) MGI PMID:21670299 MGI:5014435 NCBI chr 6:103,899,410...103,923,389
Ensembl chr 6:107,773,229...107,796,815
JBrowse link
G PRDM4 PR/SET domain 4 ISO PMID:23048031 ParkinsonsUK-UCL PMID:23048031 RGD:10054084 NCBI chr12:105,303,009...105,331,305
Ensembl chr12:108,699,444...108,727,304
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISO (MGI:6148443|PMID:27430620) ARUK-UCL PMID:27430620 MGI:6148443 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 ISO (MGI:6148443|PMID:27430620) ARUK-UCL PMID:27430620 MGI:6148443 NCBI chr 1:55,928,577...55,998,628
Ensembl chr 1:57,664,237...57,702,227
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO (PMID:19725078), (PMID:22314364) ParkinsonsUK-UCL PMID:19725078 PMID:22314364 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770
JBrowse link
G PSEN1 presenilin 1 ISO (PMID:28008308), (PMID:29061364) ARUK-UCL PMID:28008308 PMID:29061364 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876
JBrowse link
G PTH parathyroid hormone ISO (PMID:17696759) GO_Central PMID:17696759 NCBI chr11:13,653,777...13,657,901
Ensembl chr11:13,347,838...13,351,802
JBrowse link
G PTPN22 protein tyrosine phosphatase non-receptor type 22 ISO (PMID:23991106)
(MGI:5562517|PMID:23871208), (MGI:5640942|PMID:23991106)
UniProtKB
UniProt
PMID:23871208 PMID:23991106 MGI:5562517 MGI:5640942 NCBI chr 1:88,685,736...88,743,164
Ensembl chr 1:123,734,511...123,790,830
JBrowse link
G PTRH2 peptidyl-tRNA hydrolase 2 ISO (PMID:15006356) UniProtKB PMID:15006356 NCBI chr17:53,763,222...53,773,191
Ensembl chr17:58,605,850...58,615,809
JBrowse link
G RACK1 receptor for activated C kinase 1 ISO (PMID:19451233) UniProtKB PMID:19451233 NCBI chr 5:176,462,991...176,470,153
Ensembl chr 5:183,712,665...183,720,128
JBrowse link
G RARA retinoic acid receptor alpha ISO (MGI:3771251|PMID:18026104) MGI PMID:18026104 MGI:3771251 NCBI chr17:16,932,485...16,980,958 JBrowse link
G RB1 RB transcriptional corepressor 1 ISO (PMID:25100735)
(MGI:5607667|PMID:25100735)
MGI PMID:25100735 MGI:5607667 NCBI chr13:29,453,872...29,624,665
Ensembl chr13:48,155,795...48,324,575
JBrowse link
G RBL1 RB transcriptional corepressor like 1 ISO (PMID:25100735) MGI PMID:25100735 NCBI chr20:33,324,663...33,419,891
Ensembl chr20:34,443,203...34,534,109
JBrowse link
G RBL2 RB transcriptional corepressor like 2 ISO (PMID:25100735) MGI PMID:25100735 NCBI chr16:33,674,751...33,731,308
Ensembl chr16:52,759,290...52,816,175
JBrowse link
G RBMS3 RNA binding motif single stranded interacting protein 3 ISO (PMID:28409548) UniProtKB PMID:28409548 NCBI chr 3:28,460,921...29,931,862
Ensembl chr 3:29,494,280...30,245,021
JBrowse link
G RCOR1 REST corepressor 1 ISO (MGI:3580760|PMID:15907476) UniProt PMID:15907476 MGI:3580760 NCBI chr14:83,209,992...83,346,783 JBrowse link
G REL REL proto-oncogene, NF-kB subunit ISO (PMID:22065573) CACAO PMID:22065573 NCBI chr2A:60,972,022...61,013,562
Ensembl chr2A:62,113,581...62,155,241
JBrowse link
G REST RE1 silencing transcription factor ISO (PMID:20564196)
(MGI:3580760|PMID:15907476), (MGI:6294387|PMID:11039732)
(MGI:1289984|PMID:9771705)
PMID:25108103
UniProtKB
UniProt
PMID:9771705 PMID:11039732 PMID:15907476 PMID:20564196 PMID:25108103 MGI:1289984 MGI:3580760 MGI:6294387 RGD:14397584 NCBI chr 4:66,984,466...67,012,301
Ensembl chr 4:73,526,085...73,582,242
JBrowse link
G RNASEH2B ribonuclease H2 subunit B ISO (MGI:5435090|PMID:22802351) MGI PMID:22802351 MGI:5435090 NCBI chr13:32,047,830...32,108,573
Ensembl chr13:50,795,701...50,852,909
JBrowse link
G ROBO1 roundabout guidance receptor 1 ISO (MGI:5913048|PMID:25691540) BHF-UCL PMID:25691540 MGI:5913048 NCBI chr 3:78,707,802...79,876,519
Ensembl chr 3:80,581,388...81,569,308
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr2A:11,167,353...11,331,339
Ensembl chr2A:11,318,370...11,478,986
JBrowse link
G ROS1 ROS proto-oncogene 1, receptor tyrosine kinase ISO (MGI:2675865|PMID:12773415) MGI PMID:12773415 MGI:2675865 NCBI chr 6:115,095,753...115,234,525
Ensembl chr 6:119,238,419...119,376,053
JBrowse link
G SAMD7 sterile alpha motif domain containing 7 ISO (MGI:5908328|PMID:23565263) UniProt PMID:23565263 MGI:5908328 NCBI chr 3:166,914,164...166,952,937
Ensembl chr 3:174,980,176...175,007,421
JBrowse link
G SERPINE1 serpin family E member 1 ISO caspase-3 RGD PMID:22659625 RGD:8547927 NCBI chr 7:93,267,517...93,279,728
Ensembl chr 7:106,510,130...106,518,450
JBrowse link
G SERPINF1 serpin family F member 1 ISO Hif1a RGD PMID:21922517 RGD:8554899 NCBI chr17:1,745,597...1,761,399
Ensembl chr17:1,638,556...1,653,568
JBrowse link
G SFMBT2 Scm like with four mbt domains 2 ISO (PMID:23385818) UniProtKB PMID:23385818 NCBI chr10:7,184,075...7,439,100
Ensembl chr10:7,172,229...7,419,939
JBrowse link
G SFRP1 secreted frizzled related protein 1 ISO (PMID:10980594)
(MGI:4429763|PMID:19850029)
UniProtKB
MGI
PMID:10980594 PMID:19850029 MGI:4429763 NCBI chr 8:40,507,027...40,555,053 JBrowse link
G SFRP2 secreted frizzled related protein 2 ISO (MGI:4835154|PMID:10980594) UniProt PMID:10980594 MGI:4835154 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258
JBrowse link
G SH3GL2 SH3 domain containing GRB2 like 2, endophilin A1 ISO (PMID:24854121) ARUK-UCL PMID:24854121 NCBI chr 9:17,386,298...17,605,722
Ensembl chr 9:18,045,198...18,097,579
JBrowse link
G SHH sonic hedgehog signaling molecule ISO (MGI:3611729|PMID:16396903) UniProt PMID:16396903 MGI:3611729 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651
JBrowse link
G SIRT1 sirtuin 1 ISO (PMID:19479941), (PMID:20203304), (PMID:23296834)
(PMID:17916362), (PMID:20203304)
AgBase
CACAO
PMID:17916362 PMID:19479941 PMID:20203304 PMID:23296834 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G SLC24A3 solute carrier family 24 member 3 ISO (MGI:6104227|PMID:28602864) ARUK-UCL PMID:28602864 MGI:6104227 NCBI chr20:19,168,820...19,680,706
Ensembl chr20:19,137,938...19,646,475
JBrowse link
G SLC2A10 solute carrier family 2 member 10 ISO (PMID:16550171) ARUK-UCL PMID:16550171 NCBI chr20:43,043,801...43,068,304
Ensembl chr20:44,128,837...44,153,148
JBrowse link
G SLC35C2 solute carrier family 35 member C2 ISO (MGI:4849897|PMID:20837470) MGI PMID:20837470 MGI:4849897 NCBI chr20:42,686,735...42,701,321
Ensembl chr20:43,772,681...43,780,671
JBrowse link
G SLC7A5 solute carrier family 7 member 5 ISO (PMID:24038088) ARUK-UCL PMID:24038088 NCBI chr16:68,512,407...68,552,763 JBrowse link
G SLIT2 slit guidance ligand 2 ISO (MGI:3819920|PMID:18829537) MGI PMID:18829537 MGI:3819920 NCBI chr 4:14,654,448...15,023,708
Ensembl chr 4:20,158,952...20,314,656
JBrowse link
G SLIT3 slit guidance ligand 3 ISO (MGI:3819920|PMID:18829537) MGI PMID:18829537 MGI:3819920 NCBI chr 5:164,029,432...164,664,156
Ensembl chr 5:170,793,731...171,425,242
JBrowse link
G SMAD2 SMAD family member 2 ISO (MGI:5461254|PMID:23152446) MGI PMID:23152446 MGI:5461254 NCBI chr18:41,213,001...41,309,902
Ensembl chr18:44,580,905...44,668,530
JBrowse link
G SMCR8 SMCR8-C9orf72 complex subunit ISO (PMID:28195531) HGNC PMID:28195531 NCBI chr17:32,858,205...32,871,132
Ensembl chr17:37,884,037...37,896,972
JBrowse link
G SMO smoothened, frizzled class receptor ISO (MGI:3611729|PMID:16396903) UniProt PMID:16396903 MGI:3611729 NCBI chr 7:121,143,968...121,168,873
Ensembl chr 7:133,668,304...133,693,048
JBrowse link
G SNX12 sorting nexin 12 ISO (PMID:22709416) UniProtKB PMID:22709416 NCBI chr  X:60,327,484...60,336,682
Ensembl chr  X:70,384,164...70,395,737
JBrowse link
G SOX11 SRY-box transcription factor 11 ISO (PMID:19808959)
(MGI:5285167|PMID:19808959)
UniProtKB
UniProt
PMID:19808959 MGI:5285167 NCBI chr2A:5,699,738...5,711,210 JBrowse link
G SOX9 SRY-box transcription factor 9 ISO (MGI:5524169|PMID:24218621) MGI PMID:24218621 MGI:5524169 NCBI chr17:66,028,737...66,034,122 JBrowse link
G SRSF6 serine and arginine rich splicing factor 6 ISO Bcl2l11 RGD PMID:23737756 RGD:11039479 NCBI chr20:39,795,659...39,801,864
Ensembl chr20:40,888,560...40,891,853
JBrowse link
G STC2 stanniocalcin 2 ISO (PMID:9753616) UniProtKB PMID:9753616 NCBI chr 5:168,668,851...168,681,274
Ensembl chr 5:175,575,419...175,587,832
JBrowse link
G STOX1 storkhead box 1 ISO (PMID:22253775) UniProtKB PMID:22253775 NCBI chr10:65,304,649...65,359,501
Ensembl chr10:67,882,654...67,894,039
JBrowse link
G TAF1 TATA-box binding protein associated factor 1 ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chr  X:60,630,137...60,729,904
Ensembl chr  X:70,684,217...70,782,323
JBrowse link
G TARDBP TAR DNA binding protein ISO (PMID:18305152) CACAO PMID:18305152 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
JBrowse link
G TBK1 TANK binding kinase 1 ISO (MGI:4457239|PMID:18665841) UniProt PMID:18665841 MGI:4457239 NCBI chr12:24,419,271...24,469,164
Ensembl chr12:24,917,246...24,968,587
JBrowse link
G TCF4 transcription factor 4 ISO (MGI:4453908|PMID:20231428) MGI PMID:20231428 MGI:4453908 NCBI chr18:48,603,069...48,969,010
Ensembl chr18:51,938,357...52,352,030
JBrowse link
G TCL1A TCL1 family AKT coactivator A ISO (MGI:3759699|PMID:17938240) MGI PMID:17938240 MGI:3759699 NCBI chr14:76,339,614...76,343,546
Ensembl chr14:95,664,120...95,667,375
JBrowse link
G TERF2 telomeric repeat binding factor 2 ISO (PMID:11927518) BHF-UCL PMID:11927518 NCBI chr16:49,729,906...49,763,002
Ensembl chr16:69,116,539...69,148,423
JBrowse link
G TERT telomerase reverse transcriptase ISO (PMID:11927518) BHF-UCL PMID:11927518 NCBI chr 5:1,542,217...1,586,775
Ensembl chr 5:1,300,960...1,338,872
JBrowse link
G TFAP4 transcription factor AP-4 ISO (MGI:3663964|PMID:16924111) UniProt PMID:16924111 MGI:3663964 NCBI chr16:3,176,129...3,226,404
Ensembl chr16:4,348,929...4,368,525
JBrowse link
G TGFB1 transforming growth factor beta 1 ISO (PMID:19913496), (PMID:20067797), (PMID:22269326), (PMID:25163461), (PMID:26634652), (PMID:29167509), (PMID:29529050)
(MGI:5921830|PMID:26634652)
(PMID:22269326)
BHF-UCL PMID:19913496 PMID:20067797 PMID:22269326 PMID:25163461 PMID:26634652 PMID:29167509 PMID:29529050 MGI:5921830 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
G TGFB2 transforming growth factor beta 2 ISO (PMID:25217442)
(MGI:5688835|PMID:21984612)
BHF-UCL
UniProt
PMID:21984612 PMID:25217442 MGI:5688835 NCBI chr 1:193,907,398...194,005,800
Ensembl chr 1:198,758,751...198,859,041
JBrowse link
G TGFBR3 transforming growth factor beta receptor 3 ISO (MGI:5688831|PMID:22960625) BHF-UCL PMID:22960625 MGI:5688831 NCBI chr 1:94,337,275...94,539,229
Ensembl chr 1:93,080,452...93,285,587
JBrowse link
G TGIF1 TGFB induced factor homeobox 1 ISO tropoelastin RGD PMID:18441095 RGD:2317192 NCBI chr18:10,819,015...10,830,282
Ensembl chr18:13,128,359...13,139,145
JBrowse link
G TIPARP TCDD inducible poly(ADP-ribose) polymerase ISO (PMID:23275542) MGI PMID:23275542 NCBI chr 3:153,730,307...153,762,442
Ensembl chr 3:161,783,999...161,816,525
JBrowse link
G TLE5 TLE family member 5, transcriptional modulator ISO (PMID:15006356) UniProtKB PMID:15006356 NCBI chr19:2,078,933...2,089,117
Ensembl chr19:3,030,550...3,040,375
JBrowse link
G TMF1 TATA element modulatory factor 1 ISO (MGI:5440392|PMID:22553199) MGI PMID:22553199 MGI:5440392 NCBI chr 3:68,955,866...68,988,353
Ensembl chr 3:70,322,814...70,355,460
JBrowse link
G TNF tumor necrosis factor ISO (PMID:24299952)
(MGI:5763710|PMID:26427354)
(PMID:15345745), (PMID:20164187), (PMID:22267480), (PMID:22499991), (PMID:26371161), (PMID:31124343), (PMID:31824476)
ARUK-UCL
MGI
BHF-UCL
PMID:15345745 PMID:20164187 PMID:22267480 PMID:22499991 PMID:24299952 PMID:26371161 PMID:26427354 PMID:31124343 PMID:31824476 MGI:5763710 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A ISO type 2 iodothyronine deiodinase in alpha tanycytes RGD PMID:20501675 RGD:5130988 NCBI chr12:6,457,617...6,470,969
Ensembl chr12:6,374,257...6,387,613
JBrowse link
G TP53 tumor protein p53 ISO (MGI:3805393|PMID:18625840) MGI PMID:18625840 MGI:3805393 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120
JBrowse link
G TP53INP1 tumor protein p53 inducible nuclear protein 1 ISO (MGI:5788610|PMID:26589288) BHF-UCL PMID:26589288 MGI:5788610 NCBI chr 8:91,545,655...91,569,535
Ensembl chr 8:93,747,162...93,767,196
JBrowse link
G TRIM6 tripartite motif containing 6 ISO (PMID:24882218) UniProtKB PMID:24882218 NCBI chr11:5,731,256...5,748,057 JBrowse link
G TTBK1 tau tubulin kinase 1 ISO (PMID:19118186) ARUK-UCL PMID:19118186 NCBI chr 6:42,835,285...42,880,100
Ensembl chr 6:44,131,360...44,169,912
JBrowse link
G UCN urocortin ISO ghrelin
Pla2g6
RGD PMID:14563694 PMID:21540451 RGD:5490560 RGD:5508192 NCBI chr2A:27,309,458...27,311,268
Ensembl chr2A:27,397,295...27,397,669
JBrowse link
G UCN2 urocortin 2 ISO Fshb RGD PMID:19193717 RGD:2317015 NCBI chr 3:48,484,628...48,485,179 JBrowse link
G VDR vitamin D receptor ISO (PMID:28885847) ARUK-UCL PMID:28885847 NCBI chr12:40,828,413...40,891,700
Ensembl chr12:41,702,742...41,766,192
JBrowse link
G VEGFA vascular endothelial growth factor A ISO (PMID:22773844), (PMID:28977001)
(MGI:5461755|PMID:22886301)
(PMID:19148554)
BHF-UCL
MGI
ARUK-UCL
PMID:19148554 PMID:22773844 PMID:22886301 PMID:28977001 MGI:5461755 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353
JBrowse link
G VEGFB vascular endothelial growth factor B ISO (PMID:18259607) UniProtKB PMID:18259607 NCBI chr11:59,591,750...59,595,926 JBrowse link
G VHL von Hippel-Lindau tumor suppressor ISO (PMID:23338840)
(MGI:5429122|PMID:22627278)
CAFA
MGI
PMID:22627278 PMID:23338840 MGI:5429122 NCBI chr 3:10,077,630...10,089,499
Ensembl chr 3:10,430,143...10,440,234
JBrowse link
G VPS35 VPS35 retromer complex component ISO (MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:5694519 NCBI chr16:26,924,901...26,954,443
Ensembl chr16:45,817,371...45,846,531
JBrowse link
G WDR35 WD repeat domain 35 ISO Gch1
Bcl2, Bcl2l1
RGD PMID:18671723 PMID:23289926 RGD:11553920 RGD:11553926 NCBI chr2A:19,896,498...19,977,295
Ensembl chr2A:20,014,127...20,093,810
JBrowse link
G WNT4 Wnt family member 4 ISO (PMID:15317892)
(MGI:2178881|PMID:11948913)
UniProtKB
MGI
PMID:11948913 PMID:15317892 MGI:2178881 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
G WNT8B Wnt family member 8B ISO (MGI:4413515|PMID:19890917) MGI PMID:19890917 MGI:4413515 NCBI chr10:97,079,996...97,083,933
Ensembl chr10:100,544,531...100,565,369
JBrowse link
G WWP2 WW domain containing E3 ubiquitin protein ligase 2 ISO (PMID:18776082) UniProtKB PMID:18776082 NCBI chr16:50,142,402...50,322,052
Ensembl chr16:69,525,246...69,703,831
JBrowse link
G XDH xanthine dehydrogenase ISO (PMID:18386220) UniProtKB PMID:18386220 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
G YAP1 Yes1 associated transcriptional regulator ISO (PMID:29403552) CACAO PMID:29403552 NCBI chr11:97,061,367...97,186,961
Ensembl chr11:100,552,424...100,681,301
JBrowse link
G YY1 YY1 transcription factor ISO (PMID:22065573) CACAO PMID:22065573 NCBI chr14:80,859,491...80,903,651 JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 ISO (MGI:5619432|PMID:23776228) CACAO PMID:23776228 MGI:5619432 NCBI chr 3:111,445,520...112,275,946
Ensembl chr 3:118,389,250...118,431,453
JBrowse link
G ZBTB7B zinc finger and BTB domain containing 7B ISO (MGI:5450776|PMID:23034280) MGI PMID:23034280 MGI:5450776 NCBI chr 1:130,350,798...130,366,690
Ensembl chr 1:133,959,847...133,975,729
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A ISO (PMID:18178554)
(MGI:5486545|PMID:18178554)
BHF-UCL PMID:18178554 MGI:5486545 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
G ZMPSTE24 zinc metallopeptidase STE24 ISO (MGI:3789238|PMID:16079796), (MGI:5609934|PMID:23117660) MGI PMID:16079796 PMID:23117660 MGI:3789238 MGI:5609934 NCBI chr 1:39,545,264...39,589,721
Ensembl chr 1:40,869,076...40,912,747
JBrowse link
G ZNF148 zinc finger protein 148 ISO (PMID:12771217) UniProtKB PMID:12771217 NCBI chr 3:122,357,670...122,507,142
Ensembl chr 3:129,229,690...129,320,554
JBrowse link
G ZNF281 zinc finger protein 281 ISO (PMID:10448078)
(PMID:12771217)
UniProtKB PMID:10448078 PMID:12771217 NCBI chr 1:176,004,142...176,009,291 JBrowse link
G ZNF503 zinc finger protein 503 ISO (PMID:20735826) UniProtKB PMID:20735826 NCBI chr10:71,924,190...71,928,182
Ensembl chr10:74,587,682...74,593,545
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 ISO (PMID:21336257) UniProtKB PMID:21336257 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089
JBrowse link
G DHX36 DEAH-box helicase 36 ISO (PMID:26489465) UniProt PMID:26489465 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 ISO (PMID:28297718) CACAO PMID:28297718 NCBI chr 5:136,035,464...136,038,524
Ensembl chr 5:142,151,441...142,154,262
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
JBrowse link
G KHSRP KH-type splicing regulatory protein ISO (PMID:28275056)
(PMID:16126846)
CACAO
UniProtKB
PMID:16126846 PMID:28275056 NCBI chr19:5,433,989...5,445,721 JBrowse link
G MOV10 Mov10 RISC complex RNA helicase ISO (PMID:24726324) UniProt PMID:24726324 NCBI chr 1:115,327,051...115,353,483
Ensembl chr 1:124,999,353...125,025,820
JBrowse link
G PLEKHN1 pleckstrin homology domain containing N1 ISO (PMID:29180010)
(MGI:6105829|PMID:27616329)
UniProt PMID:27616329 PMID:29180010 MGI:6105829 Ensembl chr 1:865,290...873,575 JBrowse link
G QKI QKI, KH domain containing RNA binding ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr 6:161,361,413...161,523,414 JBrowse link
G RBM24 RNA binding motif protein 24 ISO (PMID:24375645) UniProtKB PMID:24375645 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 ISO (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) UniProt PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402
JBrowse link
G TARDBP TAR DNA binding protein ISO (PMID:28335005) CACAO PMID:28335005 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
JBrowse link
G TRIM71 tripartite motif containing 71 ISO (PMID:23125361) CACAO PMID:23125361 NCBI chr 3:32,745,217...32,824,985
Ensembl chr 3:33,050,997...33,123,910
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase ISO (PMID:26255671)
(PMID:24726324)
UniProtKB
UniProt
PMID:24726324 PMID:26255671 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A ISO (PMID:19909337)
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560), (MGI:5751631|PMID:26255671)
UniProtKB
UniProt
PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 PMID:26255671 MGI:3842851 MGI:5706859 MGI:5706909 MGI:5707103 MGI:5751631 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D ISO (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chr 6:147,266,039...147,304,289
Ensembl chr 6:151,974,485...151,999,898
JBrowse link
G ZFP36 ZFP36 ring finger protein ISO (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15766526)
(MGI:5795824|PMID:17288565)
(MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233)
(PMID:11719186), (PMID:15687258), (PMID:20221403), (PMID:27193233), (PMID:9703499)
UniProtKB
UniProt
PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 PMID:15687258 PMID:15766526 PMID:17288565 PMID:20221403 PMID:22701344 PMID:27193233 MGI:5784976 MGI:5788345 MGI:5795824 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 ISO (PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:26542173)
(MGI:5779430|PMID:27102483), (MGI:5784968|PMID:24700863)
(MGI:4818820|PMID:20622884), (MGI:5784967|PMID:24733888), (MGI:5784976|PMID:22701344)
(PMID:12198173), (PMID:25014217), (PMID:25106868)
UniProtKB
UniProt
PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 PMID:19179481 PMID:20622884 PMID:22701344 PMID:24700863 PMID:24733888 PMID:25014217 PMID:25106868 PMID:26542173 PMID:27102483 MGI:4818820 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 ISO (PMID:25106868)
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344)
UniProtKB
UniProt
PMID:20622884 PMID:22701344 PMID:25106868 MGI:4818820 MGI:5784976 NCBI chr2A:43,311,744...43,315,928 JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGEL2 angel homolog 2 ISO (PMID:22547059) HGNC PMID:22547059 NCBI chr 1:188,554,632...188,578,497
Ensembl chr 1:193,412,133...193,435,331
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 ISO (PMID:19029303)
(MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:26489465), (PMID:29180010)
UniProtKB
UniProt
PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 MGI:6105829 NCBI chr19:7,259,829...7,306,808
Ensembl chr19:8,114,849...8,147,137
JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 ISO (PMID:12034726) UniProt PMID:12034726 NCBI chr 1:49,288,364...49,444,457
Ensembl chr 1:50,853,276...50,951,058
JBrowse link
G HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 ISO (MGI:5306322|PMID:12456657) UniProt PMID:12456657 MGI:5306322 NCBI chr 5:133,132,030...133,140,771
Ensembl chr 5:139,277,004...139,277,939
JBrowse link
G HNRNPC heterogeneous nuclear ribonucleoprotein C ISO (PMID:16010978) UniProtKB PMID:16010978 NCBI chr14:2,022,280...2,083,215 JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) UniProtKB PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr 1:182,286,854...182,336,306
Ensembl chr 1:186,608,158...186,613,911
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chr19:319,953...334,945 JBrowse link
G RBM10 RNA binding motif protein 10 ISO (MGI:4367529|PMID:19508861) MGI PMID:19508861 MGI:4367529 NCBI chr  X:39,582,480...39,623,749
Ensembl chr  X:47,440,815...47,481,204
JBrowse link
G RBM38 RNA binding motif protein 38 ISO (PMID:17050675) UniProtKB PMID:17050675 NCBI chr20:53,731,641...53,749,688 JBrowse link
G TARDBP TAR DNA binding protein ISO (PMID:17481916) BHF-UCL PMID:17481916 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
JBrowse link
G TIRAP TIR domain containing adaptor protein ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chr11:121,100,558...121,112,844
Ensembl chr11:125,018,064...125,022,309
JBrowse link
G ZFP36 ZFP36 ring finger protein ISO (PMID:15014438) UniProtKB PMID:15014438 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
chromatin silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTBP1 C-terminal binding protein 1 ISO (PMID:21102443) BHF-UCL PMID:21102443 NCBI chr 4:1,354,806...1,393,244
Ensembl chr 4:1,238,984...1,266,822
JBrowse link
G HELLS helicase, lymphoid specific ISO (MGI:3510059|PMID:15448183) MGI PMID:15448183 MGI:3510059 NCBI chr10:91,282,330...91,344,156
Ensembl chr10:94,790,292...94,847,209
JBrowse link
G HMGB1 high mobility group box 1 ISO (PMID:19158276) UniProt PMID:19158276 NCBI chr13:11,737,942...11,894,923
Ensembl chr13:30,174,899...30,179,527
JBrowse link
G KDM1A lysine demethylase 1A ISO (MGI:4461095|PMID:20123967) BHF-UCL PMID:20123967 MGI:4461095 NCBI chr 1:22,205,624...22,269,571
Ensembl chr 1:23,153,066...23,217,692
JBrowse link
G KMT2D lysine methyltransferase 2D ISO (MGI:4849597|PMID:20808952) UniProt PMID:20808952 MGI:4849597 NCBI chr12:39,689,463...39,731,904
Ensembl chr12:40,575,083...40,608,661
JBrowse link
G LOC100970460 histone H1.0 ISO (PMID:19158276) UniProt PMID:19158276 NCBI chr22:18,720,235...18,722,440
Ensembl chr22:36,551,693...36,552,277
JBrowse link
G MECP2 methyl-CpG binding protein 2 ISO (MGI:3530434|PMID:15608638) MGI PMID:15608638 MGI:3530434 NCBI chr  X:143,571,864...143,647,192
Ensembl chr  X:153,465,204...153,527,854
JBrowse link
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D ISO (MGI:5551345|PMID:24135283) UniProt PMID:24135283 MGI:5551345 NCBI chr17:54,698,338...54,761,889
Ensembl chr17:59,824,566...59,887,015
JBrowse link
G TNP1 transition protein 1 ISO (PMID:11315969) UniProtKB PMID:11315969 NCBI chr2B:104,122,748...104,123,349
Ensembl chr2B:222,723,606...222,724,212
JBrowse link
G UBR2 ubiquitin protein ligase E3 component n-recognin 2 ISO (MGI:4431162|PMID:20080676) UniProt PMID:20080676 MGI:4431162 NCBI chr 6:42,150,409...42,282,486
Ensembl chr 6:43,449,154...43,579,224
JBrowse link
chromatin silencing at telomere term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO (MGI:892875|PMID:9214638) ARUK-UCL PMID:9214638 MGI:892875 NCBI chr17:14,572,868...14,618,012
Ensembl chr17:14,814,054...14,842,295
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO (PMID:9214638) ARUK-UCL PMID:9214638 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726
JBrowse link
G RIF1 replication timing regulatory factor 1 ISO (MGI:5584328|PMID:24735877) BHF-UCL PMID:24735877 MGI:5584328 NCBI chr2B:38,721,658...38,818,488
Ensembl chr2B:155,985,960...156,052,926
JBrowse link
conversion of ds siRNA to ss siRNA involved in RNA interference term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DICER1 dicer 1, ribonuclease III ISO (PMID:19701182) BHF-UCL PMID:19701182 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX9 DExH-box helicase 9 ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chr 1:158,355,472...158,404,178
Ensembl chr 1:162,006,822...162,055,833
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chr 1:220,450,218...220,461,412
Ensembl chr 1:225,817,899...225,842,031
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chr17:8,479,806...8,538,336
Ensembl chr17:8,468,240...8,519,552
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chr 6:83,491,803...83,527,256 JBrowse link
G YBX1 Y-box binding protein 1 ISO (PMID:19029303) UniProtKB PMID:19029303 NCBI chr 1:41,982,365...42,002,430
Ensembl chr 1:43,360,052...43,380,313
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT7 CCR4-NOT transcription complex subunit 7 ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G NOCT nocturnin ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 4:131,378,656...131,409,711
Ensembl chr 4:142,691,169...142,719,514
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr13:9,420,405...9,579,859
Ensembl chr13:27,798,607...27,921,266
JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor ISO (PMID:20584987), (PMID:20852261) UniProtKB PMID:20584987 PMID:20852261 NCBI chr11:54,861,349...54,893,279
Ensembl chr11:58,311,235...58,342,561
JBrowse link
DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNMT3A DNA methyltransferase 3 alpha ISO (MGI:3768461|PMID:17938196)
(MGI:3611125|PMID:16322236)
MGI PMID:16322236 PMID:17938196 MGI:3611125 MGI:3768461 NCBI chr2A:25,229,593...25,344,733
Ensembl chr2A:25,331,095...25,412,605
JBrowse link
G DNMT3B DNA methyltransferase 3 beta ISO (MGI:3768461|PMID:17938196) MGI PMID:17938196 MGI:3768461 NCBI chr20:29,049,993...29,096,957
Ensembl chr20:30,186,069...30,215,487
JBrowse link
G HDAC1 histone deacetylase 1 ISO (PMID:23770133) BHF-UCL PMID:23770133 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410
JBrowse link
G HELLS helicase, lymphoid specific ISO (MGI:3573964|PMID:15647320) UniProt PMID:15647320 MGI:3573964 NCBI chr10:91,282,330...91,344,156
Ensembl chr10:94,790,292...94,847,209
JBrowse link
G MBD2 methyl-CpG binding domain protein 2 ISO (PMID:23770133) BHF-UCL PMID:23770133 NCBI chr18:47,534,356...47,609,481 JBrowse link
G MBD3 methyl-CpG binding domain protein 3 ISO (MGI:3611125|PMID:16322236) MGI PMID:16322236 MGI:3611125 Ensembl chr19:1,549,184...1,559,254 JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO (MGI:3611125|PMID:16322236) MGI PMID:16322236 MGI:3611125 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 ISO (PMID:20065043) UniProtKB PMID:20065043 NCBI chr 5:175,695,802...175,780,534
Ensembl chr 5:183,007,081...183,089,997
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 ISO (PMID:20065043), (PMID:21336257) UniProtKB PMID:20065043 PMID:21336257 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 ISO (PMID:20065043) UniProtKB PMID:20065043 NCBI chr 5:150,262,907...150,280,215
Ensembl chr 5:156,256,448...156,274,293
JBrowse link
G EXOSC3 exosome component 3 ISO (PMID:11782436) UniProtKB PMID:11782436 NCBI chr 9:37,611,173...37,634,869
Ensembl chr 9:38,552,659...38,558,078
JBrowse link
G EXOSC5 exosome component 5 ISO (PMID:11782436) UniProtKB PMID:11782436 NCBI chr19:38,379,884...38,391,309
Ensembl chr19:46,886,326...46,897,703
JBrowse link
G EXOSC9 exosome component 9 ISO (PMID:11782436) UniProtKB PMID:11782436 NCBI chr 4:114,001,770...114,017,395
Ensembl chr 4:125,138,668...125,154,288
JBrowse link
gene silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHMP1A charged multivesicular body protein 1A ISO (PMID:11559747) UniProtKB PMID:11559747 NCBI chr16:70,398,021...70,411,383
Ensembl chr16:90,003,892...90,017,653
JBrowse link
G DNMT1 DNA methyltransferase 1 ISO (MGI:3687778|PMID:10615135) UniProt PMID:10615135 MGI:3687778 NCBI chr19:9,681,847...9,745,334
Ensembl chr19:10,342,478...10,406,972
JBrowse link
G KCNQ1 potassium voltage-gated channel subfamily Q member 1 ISO (MGI:3054495|PMID:15340049) MGI PMID:15340049 MGI:3054495 NCBI chr11:2,469,750...2,874,467 JBrowse link
G KMT2B lysine methyltransferase 2B ISO (MGI:4849597|PMID:20808952) MGI PMID:20808952 MGI:4849597 NCBI chr19:32,647,815...32,668,656
Ensembl chr19:41,382,458...41,402,695
JBrowse link
G SOX6 SRY-box transcription factor 6 ISO (MGI:3692153|PMID:16462943) MGI PMID:16462943 MGI:3692153 NCBI chr11:16,053,730...16,488,566
Ensembl chr11:15,747,495...16,175,246
JBrowse link
gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AJUBA ajuba LIM protein ISO (PMID:20616046) MGI PMID:20616046 NCBI chr14:3,791,309...3,802,763
Ensembl chr14:21,889,443...21,900,700
JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 ISO (PMID:23172285), (PMID:24768540) BHF-UCL PMID:23172285 PMID:24768540 NCBI chr16:38,793,212...38,902,686
Ensembl chr16:57,919,283...58,027,472
JBrowse link
G EIF6 eukaryotic translation initiation factor 6 ISO (PMID:17507929) UniProtKB PMID:17507929 NCBI chr20:31,608,264...31,614,225
Ensembl chr20:32,731,097...32,737,136
JBrowse link
G LIMD1 LIM domains containing 1 ISO (PMID:20616046) MGI PMID:20616046 NCBI chr 3:45,500,413...45,587,850
Ensembl chr 3:46,610,315...46,695,406
JBrowse link
G MOV10 Mov10 RISC complex RNA helicase ISO (PMID:17507929) UniProtKB PMID:17507929 NCBI chr 1:115,327,051...115,353,483
Ensembl chr 1:124,999,353...125,025,820
JBrowse link
G TNRC6A trinucleotide repeat containing adaptor 6A ISO (PMID:23172285) BHF-UCL PMID:23172285 Ensembl chr16:24,966,474...25,064,998 JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C ISO (PMID:23172285) BHF-UCL PMID:23172285 NCBI chr17:72,035,737...72,185,489
Ensembl chr17:77,633,564...77,738,511
JBrowse link
G WTIP WT1 interacting protein ISO (PMID:20616046) MGI PMID:20616046 NCBI chr19:31,436,223...31,461,262 JBrowse link
gene silencing by RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO2 argonaute RISC catalytic component 2 ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G EXD1 exonuclease 3'-5' domain containing 1 ISO (MGI:5751619|PMID:26669262) UniProt PMID:26669262 MGI:5751619 NCBI chr15:20,124,681...20,172,875
Ensembl chr15:38,373,481...38,418,179
JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) ISO (MGI:5439219|PMID:22902560) UniProt PMID:22902560 MGI:5439219 Ensembl chr 7:80,481,443...80,511,813 JBrowse link
G MAEL maelstrom spermatogenic transposon silencer ISO (MGI:3813746|PMID:18694567) UniProt PMID:18694567 MGI:3813746 NCBI chr 1:142,341,646...142,442,521
Ensembl chr 1:146,195,482...146,228,669
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:97,346,433...97,365,628 JBrowse link
G PIWIL2 piwi like RNA-mediated gene silencing 2 ISO (MGI:3709799|PMID:17446352), (MGI:3778312|PMID:18381894), (MGI:3815367|PMID:18922463) UniProt PMID:17446352 PMID:18381894 PMID:18922463 MGI:3709799 MGI:3778312 MGI:3815367 NCBI chr 8:21,520,166...21,608,374
Ensembl chr 8:18,463,173...18,544,186
JBrowse link
G PIWIL4 piwi like RNA-mediated gene silencing 4 ISO (MGI:3708051|PMID:17395546), (MGI:3778312|PMID:18381894), (MGI:3815367|PMID:18922463) UniProt PMID:17395546 PMID:18381894 PMID:18922463 MGI:3708051 MGI:3778312 MGI:3815367 NCBI chr11:89,572,252...89,628,251
Ensembl chr11:93,097,709...93,150,981
JBrowse link
G TDRD1 tudor domain containing 1 ISO (MGI:4356231|PMID:19465913) UniProt PMID:19465913 MGI:4356231 NCBI chr10:110,778,772...110,832,545
Ensembl chr10:114,210,165...114,262,386
JBrowse link
G TDRD12 tudor domain containing 12 ISO (MGI:5516419|PMID:24067652) UniProt PMID:24067652 MGI:5516419 NCBI chr19:29,638,686...29,750,249 JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B ISO (PMID:19716330) UniProtKB PMID:19716330 NCBI chr22:21,149,646...21,240,006
Ensembl chr22:38,850,107...39,045,914
JBrowse link
heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAHD1 bromo adjacent homology domain containing 1 ISO (PMID:19666599) UniProtKB PMID:19666599 NCBI chr15:19,376,233...19,404,699
Ensembl chr15:37,630,476...37,657,918
JBrowse link
G BAZ2A bromodomain adjacent to zinc finger domain 2A ISO (MGI:4462332|PMID:20168299)
(MGI:3653583|PMID:16678107)
MGI PMID:16678107 PMID:20168299 MGI:3653583 MGI:4462332 NCBI chr12:32,274,240...32,313,839
Ensembl chr12:32,529,634...32,566,248
JBrowse link
G EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit ISO (MGI:3820717|PMID:19026781) ARUK-UCL PMID:19026781 MGI:3820717 NCBI chr17:14,572,868...14,618,012
Ensembl chr17:14,814,054...14,842,295
JBrowse link
G HMGA2 high mobility group AT-hook 2 ISO (PMID:16901784) UniProtKB PMID:16901784 NCBI chr12:22,954,946...23,096,623 JBrowse link
G SIRT1 sirtuin 1 ISO (PMID:15469825) BHF-UCL PMID:15469825 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
heterochromatin maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID1A AT-rich interaction domain 1A ISO (MGI:5578697|PMID:24335282) MGI PMID:24335282 MGI:5578697 NCBI chr 1:25,960,868...26,047,057
Ensembl chr 1:27,018,616...27,103,239
JBrowse link
G HDAC2 histone deacetylase 2 ISO (PMID:19372552) BHF-UCL PMID:19372552 NCBI chr 6:111,731,139...111,761,826
Ensembl chr 6:115,802,367...115,833,004
JBrowse link
G MTHFR methylenetetrahydrofolate reductase ISO (PMID:24769206) BHF-UCL PMID:24769206 NCBI chr 1:10,548,196...10,568,174
Ensembl chr 1:11,766,334...11,785,419
JBrowse link
G SIRT1 sirtuin 1 ISO (PMID:15469825) BHF-UCL PMID:15469825 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G UBE2B ubiquitin conjugating enzyme E2 B ISO (MGI:3720437|PMID:17488778) MGI PMID:17488778 MGI:3720437 NCBI chr 5:129,775,011...129,794,853
Ensembl chr 5:135,925,217...135,944,609
JBrowse link
G WDHD1 WD repeat and HMG-box DNA binding protein 1 ISO (MGI:5317038|PMID:21266480) MGI PMID:21266480 MGI:5317038 NCBI chr14:35,528,981...35,614,145
Ensembl chr14:53,807,684...53,889,703
JBrowse link
heterochromatin organization involved in chromatin silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 ISO (MGI:5532809|PMID:23754746), (MGI:5803776|PMID:26391951) UniProt PMID:23754746 PMID:26391951 MGI:5532809 MGI:5803776 NCBI chr18:11,479,742...11,627,035
Ensembl chr18:13,785,912...13,933,887
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase ISO (PMID:16086026) UniProtKB PMID:16086026 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041
JBrowse link
G DCP2 decapping mRNA 2 ISO (PMID:18172165) UniProtKB PMID:18172165 NCBI chr 5:108,333,091...108,377,119
Ensembl chr 5:114,144,999...114,172,480
JBrowse link
G ERI1 exoribonuclease 1 NOT ISO (PMID:18172165) UniProtKB PMID:18172165 NCBI chr 8:10,175,556...10,249,904 JBrowse link
G EXOSC10 exosome component 10 ISO (PMID:18172165) UniProtKB PMID:18172165 NCBI chr 1:9,829,922...9,865,092
Ensembl chr 1:11,050,727...11,087,241
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated ISO (PMID:18172165) UniProtKB PMID:18172165 NCBI chr 8:37,465,986...37,479,186
Ensembl chr 8:34,642,938...34,656,142
JBrowse link
G MTPAP mitochondrial poly(A) polymerase ISO (PMID:18172165) UniProtKB PMID:18172165 NCBI chr10:30,463,414...30,500,245
Ensembl chr10:30,818,599...30,854,542
JBrowse link
G TENT2 terminal nucleotidyltransferase 2 ISO (PMID:18172165) UniProtKB PMID:18172165 NCBI chr 5:35,622,645...35,696,451
Ensembl chr 5:35,893,841...35,966,932
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B ISO (PMID:18172165) UniProtKB PMID:18172165 NCBI chr16:30,415,668...30,494,758
Ensembl chr16:49,299,498...49,373,665
JBrowse link
G TUT1 terminal uridylyl transferase 1, U6 snRNA-specific NOT ISO (PMID:18172165) UniProtKB PMID:18172165 NCBI chr11:57,932,582...57,949,473 JBrowse link
G TUT4 terminal uridylyl transferase 4 NOT ISO (PMID:18172165) UniProtKB PMID:18172165 NCBI chr 1:51,684,408...51,815,059
Ensembl chr 1:53,292,477...53,422,893
JBrowse link
G TUT7 terminal uridylyl transferase 7 NOT ISO (PMID:18172165) UniProtKB PMID:18172165 NCBI chr 9:57,433,583...57,498,675
Ensembl chr 9:85,486,521...85,554,745
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase ISO (PMID:16086026) UniProtKB PMID:16086026 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224
JBrowse link
G XRN1 5'-3' exoribonuclease 1 ISO (PMID:18172165) UniProtKB PMID:18172165 NCBI chr 3:139,337,337...139,481,479
Ensembl chr 3:146,930,988...147,073,827
JBrowse link
inactivation of X chromosome by heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 ISO (MGI:5532809|PMID:23754746) UniProt PMID:23754746 MGI:5532809 NCBI chr18:11,479,742...11,627,035
Ensembl chr18:13,785,912...13,933,887
JBrowse link
inhibition of cysteine-type endopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARD16 caspase recruitment domain family member 16 ISO (PMID:11432859) UniProtKB PMID:11432859 NCBI chr11:99,981,854...99,985,839 JBrowse link
G CAST calpastatin ISO (PMID:2407243) CAFA PMID:2407243 NCBI chr 5:91,972,572...92,084,657
Ensembl chr 5:97,527,071...97,636,650
JBrowse link
G CST7 cystatin F ISO (MGI:5904382|PMID:28251676) MGI PMID:28251676 MGI:5904382 NCBI chr20:24,889,834...24,900,766
Ensembl chr20:25,237,251...25,248,364
JBrowse link
G LOC100969375 caspase recruitment domain-containing protein 8 ISO (PMID:11821383) UniProtKB PMID:11821383 NCBI chr19:45,204,735...45,256,481
Ensembl chr19:53,798,967...53,850,328
JBrowse link
G NOL3 nucleolar protein 3 ISO PMID:16639714
PMID:17292893
UniProt PMID:16639714 PMID:17292893 RGD:10047164 RGD:10047212 NCBI chr16:47,516,156...47,521,441 JBrowse link
inhibition of cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L12 BCL2 like 12 ISO (PMID:22262180) UniProtKB PMID:22262180 NCBI chr19:46,679,749...46,688,539 JBrowse link
G FCMR Fc fragment of IgM receptor ISO (MGI:3576402|PMID:15632112) MGI PMID:15632112 MGI:3576402 NCBI chr 1:182,506,551...182,525,249
Ensembl chr 1:186,786,147...186,803,789
JBrowse link
G NOL3 nucleolar protein 3 ISO (PMID:15509781) UniProtKB PMID:15509781 NCBI chr16:47,516,156...47,521,441 JBrowse link
G XIAP X-linked inhibitor of apoptosis ISO (MGI:2681362|PMID:14623868) MGI PMID:14623868 MGI:2681362 NCBI chr  X:113,052,164...113,105,160
Ensembl chr  X:123,232,643...123,278,606
JBrowse link
miRNA loading onto RISC involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific ISO (PMID:23622242) MGI PMID:23622242 NCBI chr 1:129,937,993...129,983,747 JBrowse link
G AGO1 argonaute RISC component 1 ISO (PMID:19966796) BHF-UCL PMID:19966796 NCBI chr 1:35,148,984...35,196,252
Ensembl chr 1:36,324,733...36,360,832
JBrowse link
G AGO2 argonaute RISC catalytic component 2 ISO (PMID:18178619), (PMID:19966796) BHF-UCL PMID:18178619 PMID:19966796 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125
JBrowse link
G AGO4 argonaute RISC component 4 ISO (PMID:19966796) BHF-UCL PMID:19966796 NCBI chr 1:35,072,045...35,122,418
Ensembl chr 1:36,249,038...36,299,259
JBrowse link
G DICER1 dicer 1, ribonuclease III ISO (PMID:18178619) BHF-UCL PMID:18178619 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940
JBrowse link
G LOC100968913 argonaute RISC catalytic component 3 ISO (PMID:19966796) BHF-UCL PMID:19966796 NCBI chr 1:35,196,371...35,322,220
Ensembl chr 1:36,372,221...36,497,190
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex ISO (PMID:18178619) BHF-UCL PMID:18178619 NCBI chr12:35,246,937...35,253,378
Ensembl chr12:36,031,818...36,038,008
JBrowse link
miRNA mediated inhibition of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 ISO (PMID:18771919) UniProtKB PMID:18771919 NCBI chr 1:35,148,984...35,196,252
Ensembl chr 1:36,324,733...36,360,832
JBrowse link
G AGO2 argonaute RISC catalytic component 2 ISO (PMID:18771919)
(PMID:17671087), (PMID:19801630)
UniProtKB PMID:17671087 PMID:18771919 PMID:19801630 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125
JBrowse link
G AGO4 argonaute RISC component 4 ISO (PMID:18771919) UniProtKB PMID:18771919 NCBI chr 1:35,072,045...35,122,418
Ensembl chr 1:36,249,038...36,299,259
JBrowse link
G EIF6 eukaryotic translation initiation factor 6 ISO (PMID:17507929) UniProtKB PMID:17507929 NCBI chr20:31,608,264...31,614,225
Ensembl chr20:32,731,097...32,737,136
JBrowse link
G LOC100968913 argonaute RISC catalytic component 3 ISO (PMID:18771919) UniProtKB PMID:18771919 NCBI chr 1:35,196,371...35,322,220
Ensembl chr 1:36,372,221...36,497,190
JBrowse link
G RBM4 RNA binding motif protein 4 ISO (PMID:19801630) UniProtKB PMID:19801630 NCBI chr11:61,996,221...62,026,007
Ensembl chr11:65,298,404...65,349,183
JBrowse link
G TNRC6A trinucleotide repeat containing adaptor 6A ISO (PMID:17671087) UniProtKB PMID:17671087 Ensembl chr16:24,966,474...25,064,998 JBrowse link
G TRIM71 tripartite motif containing 71 ISO (MGI:5448492|PMID:22735451) UniProt PMID:22735451 MGI:5448492 NCBI chr 3:32,745,217...32,824,985
Ensembl chr 3:33,050,997...33,123,910
JBrowse link
G ZFP36 ZFP36 ring finger protein ISO (MGI:5487524|PMID:21278420) UniProt PMID:21278420 MGI:5487524 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE12 phosphodiesterase 12 ISO (PMID:21245038), (PMID:21666256) UniProtKB PMID:21245038 PMID:21666256 NCBI chr 3:57,489,602...57,502,240
Ensembl chr 3:58,696,083...58,699,719
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 ISO (PMID:20691904)
(MGI:4881376|PMID:20691904)
UniProtKB
UniProt
PMID:20691904 MGI:4881376 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
G SUPV3L1 Suv3 like RNA helicase ISO (PMID:19864255) UniProtKB PMID:19864255 NCBI chr10:65,647,273...65,676,179
Ensembl chr10:68,180,671...68,209,538
JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO4 argonaute RISC component 4 ISO (PMID:18771919) UniProtKB PMID:18771919 NCBI chr 1:35,072,045...35,122,418
Ensembl chr 1:36,249,038...36,299,259
JBrowse link
G DCP2 decapping mRNA 2 ISO (PMID:21070968), (PMID:28002401)
(MGI:4849882|PMID:21070968)
UniProt PMID:21070968 PMID:28002401 MGI:4849882 NCBI chr 5:108,333,091...108,377,119
Ensembl chr 5:114,144,999...114,172,480
JBrowse link
G DXO decapping exoribonuclease ISO (PMID:29601584)
(MGI:5488528|PMID:23523372)
(MGI:6368104|PMID:28283058)
UniProt PMID:23523372 PMID:28283058 PMID:29601584 MGI:5488528 MGI:6368104 NCBI chr 6:31,630,523...31,632,363
Ensembl chr 6:32,517,086...32,519,566
JBrowse link
G HSPA1A heat shock protein family A (Hsp70) member 1A ISO (PMID:10205060) UniProtKB PMID:10205060 NCBI chr 6:31,476,710...31,491,411 JBrowse link
G KHSRP KH-type splicing regulatory protein ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr19:5,433,989...5,445,721 JBrowse link
G LOC100968913 argonaute RISC catalytic component 3 ISO (PMID:18771919) UniProtKB PMID:18771919 NCBI chr 1:35,196,371...35,322,220
Ensembl chr 1:36,372,221...36,497,190
JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:12515382) MGI PMID:12515382 NCBI chr 6:31,458,514...31,468,126
Ensembl chr 6:32,344,669...32,354,631
JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:12515382) MGI PMID:12515382 NCBI chr 7:33,094,545...33,104,489 JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated ISO (PMID:12515382) MGI PMID:12515382 NCBI chr 4:138,514,194...138,528,575
Ensembl chr 4:150,171,648...150,185,947
JBrowse link
G METTL14 methyltransferase like 14 ISO (MGI:5927282|PMID:28965759) UniProt PMID:28965759 MGI:5927282 NCBI chr 4:110,879,137...110,905,131
Ensembl chr 4:121,431,026...121,458,392
JBrowse link
G METTL16 methyltransferase like 16 ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr17:2,407,331...2,500,418
Ensembl chr17:2,292,498...2,376,277
JBrowse link
G METTL3 methyltransferase like 3 ISO (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:28637692 PMID:28792938 PMID:28965759 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906
JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 ISO (MGI:4431145|PMID:20133598) UniProt PMID:20133598 MGI:4431145 NCBI chr19:42,922,655...42,924,679
Ensembl chr19:51,459,529...51,459,945
JBrowse link
G NUDT12 nudix hydrolase 12 ISO (MGI:6368680|PMID:31101919) UniProt PMID:31101919 MGI:6368680 NCBI chr 5:98,903,740...98,917,763
Ensembl chr 5:104,601,373...104,617,925
JBrowse link
G NUDT16 nudix hydrolase 16 ISO (PMID:21070968), (PMID:21337011)
(MGI:4849882|PMID:21070968)
UniProtKB
UniProt
PMID:21070968 PMID:21337011 MGI:4849882 NCBI chr 3:128,466,119...128,473,186
Ensembl chr 3:135,788,354...135,790,038
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 ISO (PMID:12721301), (PMID:16055741) UniProtKB PMID:12721301 PMID:16055741 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
G RIDA reactive intermediate imine deaminase A homolog ISO (PMID:30930054) UniProt PMID:30930054 NCBI chr 8:94,739,120...94,753,934
Ensembl chr 8:96,923,776...96,938,512
JBrowse link
G SLFN14 schlafen family member 14 ISO (PMID:25996083)
(MGI:5705207|PMID:25996083)
UniProtKB
UniProt
PMID:25996083 MGI:5705207 NCBI chr17:21,232,934...21,250,368
Ensembl chr17:21,530,009...21,539,589
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 ISO (PMID:27558897), (PMID:30559377), (PMID:30930054)
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673)
UniProt PMID:27558897 PMID:29855337 PMID:30065315 PMID:30150673 PMID:30559377 PMID:30930054 MGI:6316439 MGI:6316688 MGI:6317061 NCBI chr 1:28,007,592...28,041,179
Ensembl chr 1:29,038,831...29,070,533
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D ISO (MGI:5567042|PMID:24415781) MGI PMID:24415781 MGI:5567042 NCBI chr 6:147,266,039...147,304,289
Ensembl chr 6:151,974,485...151,999,898
JBrowse link
G ZFP36 ZFP36 ring finger protein ISO (PMID:10330172), (PMID:10751406), (PMID:11782475), (PMID:20221403) UniProtKB PMID:10330172 PMID:10751406 PMID:11782475 PMID:20221403 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 ISO PMID:10751406 MGI PMID:10751406 RGD:1580602 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 ISO (MGI:5320815|PMID:22367205) UniProt PMID:22367205 MGI:5320815 NCBI chr2A:43,311,744...43,315,928 JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 ISO (MGI:49288|PMID:1370712) MGI PMID:1370712 MGI:49288 NCBI chr 8:119,473,607...119,668,790
Ensembl chr 8:122,401,567...122,404,080
JBrowse link
mRNA cleavage involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 NOT ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,148,984...35,196,252
Ensembl chr 1:36,324,733...36,360,832
JBrowse link
G AGO2 argonaute RISC catalytic component 2 ISO (PMID:18771919)
(MGI:5616320|PMID:16357216)
(PMID:15260970), (PMID:17524464)
UniProtKB
BHF-UCL
PMID:15260970 PMID:16357216 PMID:17524464 PMID:18771919 MGI:5616320 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125
JBrowse link
G AGO4 argonaute RISC component 4 NOT ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,072,045...35,122,418
Ensembl chr 1:36,249,038...36,299,259
JBrowse link
G LOC100968913 argonaute RISC catalytic component 3 NOT ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,196,371...35,322,220
Ensembl chr 1:36,372,221...36,497,190
JBrowse link
G MOV10 Mov10 RISC complex RNA helicase ISO (PMID:16289642) UniProtKB PMID:16289642 NCBI chr 1:115,327,051...115,353,483
Ensembl chr 1:124,999,353...125,025,820
JBrowse link
mRNA cleavage involved in gene silencing by siRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 NOT ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,148,984...35,196,252
Ensembl chr 1:36,324,733...36,360,832
JBrowse link
G AGO2 argonaute RISC catalytic component 2 ISO (PMID:15260970)
(PMID:22795694)
BHF-UCL PMID:15260970 PMID:22795694 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125
JBrowse link
G AGO4 argonaute RISC component 4 NOT ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,072,045...35,122,418
Ensembl chr 1:36,249,038...36,299,259
JBrowse link
G LOC100968913 argonaute RISC catalytic component 3 NOT ISO (PMID:15260970) BHF-UCL PMID:15260970 NCBI chr 1:35,196,371...35,322,220
Ensembl chr 1:36,372,221...36,497,190
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF1 CUGBP Elav-like family member 1 ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr11:47,415,600...47,515,254
Ensembl chr11:47,967,831...48,008,487
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr 4:46,374,255...46,482,552
Ensembl chr 4:52,263,010...52,320,307
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase ISO (PMID:28002401), (PMID:30197295) UniProt PMID:28002401 PMID:30197295 NCBI chr16:33,939,300...34,343,419
Ensembl chr16:53,023,425...53,490,231
JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 ISO (PMID:27157137) ParkinsonsUK-UCL PMID:27157137 NCBI chr2B:119,929,004...120,090,367
Ensembl chr2B:238,847,674...239,007,549
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:22,501,816...22,536,050
Ensembl chr 1:23,491,310...23,521,977
JBrowse link
G METTL14 methyltransferase like 14 ISO (MGI:5559905|PMID:24394384), (MGI:5927282|PMID:28965759) UniProt PMID:24394384 PMID:28965759 MGI:5559905 MGI:5927282 NCBI chr 4:110,879,137...110,905,131
Ensembl chr 4:121,431,026...121,458,392
JBrowse link
G METTL16 methyltransferase like 16 ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr17:2,407,331...2,500,418
Ensembl chr17:2,292,498...2,376,277
JBrowse link
G METTL3 methyltransferase like 3 ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 PMID:28965759 MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906
JBrowse link
G PUM1 pumilio RNA binding family member 1 ISO (MGI:5640888|PMID:25768905) UniProt PMID:25768905 MGI:5640888 NCBI chr 1:30,205,584...30,341,979
Ensembl chr 1:31,230,268...31,364,348
JBrowse link
G RBM24 RNA binding motif protein 24 ISO (PMID:29104163) UniProtKB PMID:29104163 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RIDA reactive intermediate imine deaminase A homolog ISO (PMID:30930054) UniProt PMID:30930054 NCBI chr 8:94,739,120...94,753,934
Ensembl chr 8:96,923,776...96,938,512
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr18:14,192,293...14,352,357
Ensembl chr18:17,833,047...17,990,086
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr2A:11,167,353...11,331,339
Ensembl chr2A:11,318,370...11,478,986
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 ISO (PMID:28106072)
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673)
(PMID:27558897), (PMID:30559377), (PMID:30930054)
UniProtKB
UniProt
PMID:27558897 PMID:28106072 PMID:29855337 PMID:30065315 PMID:30150673 PMID:30559377 PMID:30930054 MGI:6316439 MGI:6316688 MGI:6317061 NCBI chr 1:28,007,592...28,041,179
Ensembl chr 1:29,038,831...29,070,533
JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein 3 ISO (PMID:28106072) UniProtKB PMID:28106072 NCBI chr 8:59,701,341...59,742,865
Ensembl chr 8:61,375,832...61,413,911
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO (MGI:3057047|PMID:15480992) MGI PMID:15480992 MGI:3057047 NCBI chr12:7,777,734...7,793,960
Ensembl chr12:7,939,262...7,944,203
JBrowse link
G AXIN2 axin 2 ISO (PMID:17072303) BHF-UCL PMID:17072303 NCBI chr17:59,476,336...59,509,358
Ensembl chr17:64,688,416...64,720,086
JBrowse link
G CIRBP cold inducible RNA binding protein ISO (PMID:11574538) UniProtKB PMID:11574538
G DICER1 dicer 1, ribonuclease III ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940
JBrowse link
G E2F1 E2F transcription factor 1 ISO (PMID:15766563) BHF-UCL PMID:15766563 NCBI chr20:29,963,083...29,973,860
Ensembl chr20:31,103,764...31,110,604
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:24335285), (PMID:32354837) UniProt PMID:24335285 PMID:32354837 NCBI chr22:12,463,859...12,515,953
Ensembl chr22:30,322,502...30,378,322
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 ISO (PMID:19029303)
(MGI:5922838|PMID:27609837)
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615), (MGI:5559905|PMID:24394384)
(PMID:21613615), (PMID:31358969)
UniProtKB
CACAO
UniProt
MGI
PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 PMID:31358969 MGI:3037407 MGI:5287957 MGI:5559905 MGI:5922838 NCBI chr19:7,259,829...7,306,808
Ensembl chr19:8,114,849...8,147,137
JBrowse link
G FUS FUS RNA binding protein ISO (PMID:27378374) MGI PMID:27378374 NCBI chr16:23,775,389...23,786,881
Ensembl chr16:31,551,135...31,562,327
JBrowse link
G GDNF glial cell derived neurotrophic factor ISO (PMID:12358785) BHF-UCL PMID:12358785 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:15192077 RGD:1357938 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U ISO (PMID:17174306) UniProtKB PMID:17174306 NCBI chr 1:220,450,218...220,461,412
Ensembl chr 1:225,817,899...225,842,031
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator ISO (PMID:25940091), (PMID:28673543) UniProt PMID:25940091 PMID:28673543 NCBI chr 5:150,086,829...150,221,401
Ensembl chr 5:156,112,358...156,216,706
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 ISO (MGI:2158083|PMID:11741878) MGI PMID:11741878 MGI:2158083 NCBI chr 1:182,286,854...182,336,306
Ensembl chr 1:186,608,158...186,613,911
JBrowse link
G MEIOC meiosis specific with coiled-coil domain ISO (MGI:5770021|PMID:26742488) UniProt PMID:26742488 MGI:5770021 NCBI chr17:12,725,114...12,744,974
Ensembl chr17:12,901,882...12,920,285
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21073857 RGD:10040969 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G NOCT nocturnin ISO (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chr 4:131,378,656...131,409,711
Ensembl chr 4:142,691,169...142,719,514
JBrowse link
G QKI QKI, KH domain containing RNA binding ISO RGD PMID:16855020 RGD:10045995 NCBI chr 6:161,361,413...161,523,414 JBrowse link
G RBM24 RNA binding motif protein 24 ISO (PMID:29104163) UniProtKB PMID:29104163 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RBM46 RNA binding motif protein 46 ISO (MGI:5644240|PMID:25397698) MGI PMID:25397698 MGI:5644240 NCBI chr 4:147,148,767...147,196,342
Ensembl chr 4:158,966,658...159,014,240
JBrowse link
G SLC11A1 solute carrier family 11 member 1 ISO (MGI:85148|PMID:9009318) MGI PMID:9009318 MGI:85148 NCBI chr2B:105,640,613...105,655,524
Ensembl chr2B:224,238,284...224,252,941
JBrowse link
G TAF15 TATA-box binding protein associated factor 15 ISO (PMID:27378374) MGI PMID:27378374 NCBI chr17:20,948,186...20,985,925 JBrowse link
G TENT5C terminal nucleotidyltransferase 5C ISO (PMID:28931820)
(MGI:5926094|PMID:28931820)
UniProtKB
UniProt
PMID:28931820 MGI:5926094 NCBI chr 1:84,894,428...84,916,868
Ensembl chr 1:119,893,916...119,895,091
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 ISO (PMID:18794151) UniProtKB PMID:18794151 NCBI chr 1:35,492,918...35,572,896
Ensembl chr 1:36,719,770...36,741,355
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353
JBrowse link
G YBX1 Y-box binding protein 1 ISO (PMID:31358969) UniProt PMID:31358969 NCBI chr 1:41,982,365...42,002,430
Ensembl chr 1:43,360,052...43,380,313
JBrowse link
G YBX2 Y-box binding protein 2 ISO (MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:3696301 NCBI chr17:7,319,186...7,325,594
Ensembl chr17:7,306,548...7,312,632
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL16 methyltransferase like 16 ISO (PMID:28525753) UniProt PMID:28525753 NCBI chr17:2,407,331...2,500,418
Ensembl chr17:2,292,498...2,376,277
JBrowse link
negative regulation of antibacterial peptide production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPINK5 serine peptidase inhibitor Kazal type 5 ISO (MGI:3770082|PMID:17012259) UniProt PMID:17012259 MGI:3770082 NCBI chr 5:143,387,981...143,578,839
Ensembl chr 5:149,506,367...149,590,930
JBrowse link
negative regulation of chemokine (C-C motif) ligand 4 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG2 arginase 2 ISO (MGI:5908771|PMID:27074721) UniProt PMID:27074721 MGI:5908771 NCBI chr14:48,197,831...48,231,829
Ensembl chr14:67,075,941...67,109,962
JBrowse link
negative regulation of chemokine (C-C motif) ligand 5 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG2 arginase 2 ISO (MGI:5908771|PMID:27074721) UniProt PMID:27074721 MGI:5908771 NCBI chr14:48,197,831...48,231,829
Ensembl chr14:67,075,941...67,109,962
JBrowse link
G MUL1 mitochondrial E3 ubiquitin protein ligase 1 ISO (PMID:23399697) UniProtKB PMID:23399697 NCBI chr 1:19,454,792...19,463,527
Ensembl chr 1:20,496,356...20,505,281
JBrowse link
G SIRPA signal regulatory protein alpha ISO (MGI:3760575|PMID:17954568) ARUK-UCL PMID:17954568 MGI:3760575 NCBI chr20:2,006,994...2,052,894
Ensembl chr20:1,773,271...1,818,106
JBrowse link
G TICAM2 toll like receptor adaptor molecule 2 ISO (PMID:19412184) UniProtKB PMID:19412184 NCBI chr 5:110,935,649...110,960,019
Ensembl chr 5:116,734,092...116,734,799
JBrowse link
negative regulation of chemokine (C-X-C motif) ligand 2 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KLF4 Kruppel like factor 4 ISO (PMID:20551324) BHF-UCL PMID:20551324 NCBI chr 9:78,634,545...78,639,447
Ensembl chr 9:106,820,954...106,825,797
JBrowse link
G MAP2K5 mitogen-activated protein kinase kinase 5 ISO PMID:20551324 BHF-UCL PMID:20551324 RGD:8553940 NCBI chr15:46,493,139...46,760,271
Ensembl chr15:64,761,394...65,029,655
JBrowse link
negative regulation of chemokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELANE elastase, neutrophil expressed ISO (PMID:12223522) UniProt PMID:12223522 NCBI chr19:276,499...280,598 JBrowse link
G EPHA2 EPH receptor A2 ISO (MGI:3847147|PMID:19443703) MGI PMID:19443703 MGI:3847147 NCBI chr 1:15,259,915...15,292,983
Ensembl chr 1:16,253,513...16,284,787
JBrowse link
G F2RL1 F2R like trypsin receptor 1 ISO (PMID:19865078) UniProt PMID:19865078 NCBI chr 5:38,462,521...38,478,882
Ensembl chr 5:39,006,331...39,024,265
JBrowse link
G IL6 interleukin 6 ISO (MGI:2673020|PMID:12925700) MGI PMID:12925700 MGI:2673020 NCBI chr 7:23,415,922...23,420,767 JBrowse link
G LGALS9 galectin 9 ISO (PMID:25754930) UniProtKB PMID:25754930 NCBI chr17:29,125,460...29,145,028
Ensembl chr17:29,623,398...29,642,959
JBrowse link
G LILRB4 leukocyte immunoglobulin like receptor B4 ISO (PMID:19380766) ARUK-UCL PMID:19380766 NCBI chr19:51,606,681...51,612,751 JBrowse link
G SIGIRR single Ig and TIR domain containing ISO (MGI:2673012|PMID:12925853) HGNC-UCL PMID:12925853 MGI:2673012 NCBI chr11:403,733...415,024 JBrowse link
G SLC37A4 solute carrier family 37 member 4 ISO (MGI:3695950|PMID:16891306) MGI PMID:16891306 MGI:3695950 NCBI chr11:113,862,537...113,869,447
Ensembl chr11:117,792,700...117,799,269
JBrowse link
G SUZ12 SUZ12 polycomb repressive complex 2 subunit ISO RGD PMID:23192652 RGD:9586745 NCBI chr17:24,790,921...24,853,790 JBrowse link
negative regulation of connective tissue growth factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC2A10 solute carrier family 2 member 10 ISO (PMID:16550171), (PMID:26376865) ARUK-UCL PMID:16550171 PMID:26376865 NCBI chr20:43,043,801...43,068,304
Ensembl chr20:44,128,837...44,153,148
JBrowse link
negative regulation of cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B1 ATPase plasma membrane Ca2+ transporting 1 ISO (MGI:6114568|PMID:28827723) UniProt PMID:28827723 MGI:6114568 NCBI chr12:87,107,900...87,229,514
Ensembl chr12:90,427,560...90,495,320
JBrowse link
G AXL AXL receptor tyrosine kinase ISO (MGI:5509105|PMID:23878224) MGI PMID:23878224 MGI:5509105 NCBI chr19:38,211,555...38,254,464
Ensembl chr19:46,719,615...46,761,747
JBrowse link
G BTK Bruton tyrosine kinase ISO (MGI:5505742|PMID:23544144) CACAO PMID:23544144 MGI:5505742 NCBI chr  X:90,551,874...90,588,786
Ensembl chr  X:100,684,017...100,725,187
JBrowse link
G BTN1A1 butyrophilin subfamily 1 member A1 ISO (MGI:4453380|PMID:20208008) UniProt PMID:20208008 MGI:4453380 NCBI chr 6:26,333,369...26,342,997
Ensembl chr 6:26,990,950...27,001,087
JBrowse link
G BTN2A2 butyrophilin subfamily 2 member A2 ISO (MGI:4453380|PMID:20208008) UniProt PMID:20208008 MGI:4453380 NCBI chr 6:26,215,215...26,227,261
Ensembl chr 6:26,873,828...26,885,592
JBrowse link
G CEACAM1 CEA cell adhesion molecule 1 ISO (MGI:3693042|PMID:17081782) MGI PMID:17081782 MGI:3693042 NCBI chr19:39,395,550...39,417,063 JBrowse link
G CIDEA cell death inducing DFFA like effector a ISO (PMID:15919794) BHF-UCL PMID:15919794 NCBI chr18:2,051,880...2,075,909 JBrowse link
G CLEC4A C-type lectin domain family 4 member A ISO (PMID:18258799) UniProtKB PMID:18258799 NCBI chr12:8,242,240...8,257,860
Ensembl chr12:8,285,174...8,300,029
JBrowse link
G CRYBA1 crystallin beta A1 ISO RGD PMID:21993393 RGD:10059647 NCBI chr17:27,522,647...27,530,767
Ensembl chr17:28,032,809...28,040,525
JBrowse link
G EPHA2 EPH receptor A2 ISO (MGI:3847147|PMID:19443703) MGI PMID:19443703 MGI:3847147 NCBI chr 1:15,259,915...15,292,983
Ensembl chr 1:16,253,513...16,284,787
JBrowse link
G FFAR4 free fatty acid receptor 4 ISO (MGI:4839696|PMID:20813258)
(MGI:5779244|PMID:26828067)
UniProt
MGI
PMID:20813258 PMID:26828067 MGI:4839696 MGI:5779244 NCBI chr10:90,312,647...90,336,115
Ensembl chr10:93,823,004...93,860,262
JBrowse link
G FOXP3 forkhead box P3 ISO (PMID:11483607) UniProt PMID:11483607 NCBI chr  X:41,550,462...41,567,492
Ensembl chr  X:49,402,652...49,417,029
JBrowse link
G GPNMB glycoprotein nmb ISO (PMID:19350579) ParkinsonsUK-UCL PMID:19350579 NCBI chr 7:23,931,220...23,959,687
Ensembl chr 7:23,539,928...23,568,624
JBrowse link
G HDAC9 histone deacetylase 9 ISO (PMID:28855441) ARUK-UCL PMID:28855441 NCBI chr 7:18,740,580...19,653,615
Ensembl chr 7:18,138,761...18,970,717
JBrowse link
G IL10 interleukin 10 ISO (PMID:1940799) UniProt
RGD
PMID:1940799 PMID:8484757 RGD:729048 NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371
JBrowse link
G LGR4 leucine rich repeat containing G protein-coupled receptor 4 ISO (MGI:5499954|PMID:23589304) UniProt PMID:23589304 MGI:5499954 NCBI chr11:27,330,279...27,437,201
Ensembl chr11:27,229,963...27,291,571
JBrowse link
G LRRC32 leucine rich repeat containing 32 ISO (MGI:3807624|PMID:18628982) MGI PMID:18628982 MGI:3807624 NCBI chr11:71,708,222...71,721,426
Ensembl chr11:75,354,997...75,367,440
JBrowse link
G MERTK MER proto-oncogene, tyrosine kinase ISO (MGI:5509105|PMID:23878224) MGI PMID:23878224 MGI:5509105 NCBI chr2A:89,977,226...90,109,970
Ensembl chr2A:113,056,852...113,162,052
JBrowse link
G NDRG2 NDRG family member 2 ISO (MGI:4835375|PMID:19815093) MGI PMID:19815093 MGI:4835375 NCBI chr14:1,831,764...1,840,819
Ensembl chr14:19,913,674...19,967,470
JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 ISO (MGI:3799438|PMID:18566389) BHF-UCL PMID:18566389 MGI:3799438 NCBI chr 4:94,925,048...95,040,849
Ensembl chr 4:105,589,062...105,704,098
JBrowse link
G NLRP12 NLR family pyrin domain containing 12 ISO (PMID:16203735) HGNC-UCL PMID:16203735 NCBI chr19:50,735,124...50,765,556
Ensembl chr19:59,582,005...59,614,436
JBrowse link
G NPTN neuroplastin ISO (MGI:6114568|PMID:28827723) UniProt PMID:28827723 MGI:6114568 NCBI chr15:52,470,545...52,544,046
Ensembl chr15:71,229,992...71,269,579
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO (MGI:3799438|PMID:18566389) BHF-UCL PMID:18566389 MGI:3799438 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060
JBrowse link
G PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 ISO (MGI:6094454|PMID:27805901) UniProt PMID:27805901 MGI:6094454 NCBI chr 6:29,844,971...29,851,792
Ensembl chr 6:30,515,139...30,518,384
JBrowse link
G PTGER4 prostaglandin E receptor 4 ISO (MGI:2151986|PMID:11602631) UniProt PMID:11602631 MGI:2151986 NCBI chr 5:69,686,906...69,700,739
Ensembl chr 5:74,731,470...74,745,148
JBrowse link
G RGCC regulator of cell cycle ISO (PMID:19162005) BHF-UCL PMID:19162005 NCBI chr13:22,639,289...22,652,594
Ensembl chr13:41,228,643...41,241,909
JBrowse link
G RNF128 ring finger protein 128 ISO (MGI:2656456|PMID:12705856) MGI PMID:12705856 MGI:2656456 NCBI chr  X:95,796,407...95,898,023
Ensembl chr  X:106,174,269...106,275,992
JBrowse link
G SLC11A1 solute carrier family 11 member 1 ISO (MGI:3619659|PMID:16470178) MGI PMID:16470178 MGI:3619659 NCBI chr2B:105,640,613...105,655,524
Ensembl chr2B:224,238,284...224,252,941
JBrowse link
G SRGN serglycin ISO (MGI:3695245|PMID:16807245) UniProt PMID:16807245 MGI:3695245 NCBI chr10:65,554,873...65,572,108
Ensembl chr10:68,089,392...68,106,250
JBrowse link
G SYT11 synaptotagmin 11 ISO (MGI:5913303|PMID:28686317) UniProt PMID:28686317 MGI:5913303 NCBI chr 1:131,193,999...131,218,752
Ensembl chr 1:135,026,032...135,046,943
JBrowse link
G TIA1 TIA1 cytotoxic granule associated RNA binding protein ISO (MGI:3037090|PMID:10921895) MGI PMID:10921895 MGI:3037090 NCBI chr2A:70,264,568...70,303,913
Ensembl chr2A:71,380,881...71,420,533
JBrowse link
G TNFRSF4 TNF receptor superfamily member 4 ISO (MGI:2683815|PMID:14635034) MGI PMID:14635034 MGI:2683815 Ensembl chr 1:1,168,935...1,171,337 JBrowse link
G TNFSF4 TNF superfamily member 4 ISO (MGI:2683815|PMID:14635034) MGI PMID:14635034 MGI:2683815 NCBI chr 1:148,684,689...148,989,775
Ensembl chr 1:152,391,450...152,415,845
JBrowse link
G TWSG1 twisted gastrulation BMP signaling modulator 1 ISO (PMID:17164348) BHF-UCL PMID:17164348 NCBI chr18:4,883,688...4,950,963
Ensembl chr18:7,164,091...7,229,271
JBrowse link
negative regulation of cytokine production involved in immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPT1 angiopoietin 1 ISO (MGI:4437182|PMID:20060382) MGI PMID:20060382 MGI:4437182 NCBI chr 8:103,893,234...104,137,661
Ensembl chr 8:106,042,041...106,286,783
JBrowse link
G APOA1 apolipoprotein A1 ISO (PMID:12458630) BHF-UCL PMID:12458630 NCBI chr11:111,673,539...111,675,428
Ensembl chr11:115,606,136...115,608,122
JBrowse link
G APOA2 apolipoprotein A2 ISO (PMID:12458630) BHF-UCL PMID:12458630 NCBI chr 1:136,634,754...136,636,122 JBrowse link
G IL10 interleukin 10 ISO (PMID:10443688) BHF-UCL PMID:10443688 NCBI chr 1:182,369,234...182,374,207
Ensembl chr 1:186,648,289...186,653,371
JBrowse link
G TNF tumor necrosis factor ISO (PMID:10443688) BHF-UCL PMID:10443688 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381
JBrowse link
negative regulation of cytokine production involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 ISO (MGI:3836690|PMID:18723473) UniProt PMID:18723473 MGI:3836690 NCBI chr  X:143,275,165...143,295,283
Ensembl chr  X:153,162,412...153,182,424
JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 ISO (MGI:3836690|PMID:18723473) UniProt PMID:18723473 MGI:3836690 NCBI chr12:49,082,122...49,158,524
Ensembl chr12:49,941,914...50,011,140
JBrowse link
G ADCY7 adenylate cyclase 7 ISO (MGI:4459338|PMID:20505140) UniProt PMID:20505140 MGI:4459338 NCBI chr16:30,507,836...30,581,068
Ensembl chr16:49,410,143...49,462,278
JBrowse link
G APOD apolipoprotein D ISO (PMID:18842892) UniProtKB PMID:18842892 NCBI chr 3:192,852,887...192,868,233
Ensembl chr 3:203,152,476...203,168,060
JBrowse link
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 ISO (MGI:5698780|PMID:25328665) UniProt PMID:25328665 MGI:5698780 NCBI chr12:102,755,388...102,818,686
Ensembl chr12:106,151,969...106,206,879
JBrowse link
G CHID1 chitinase domain containing 1 ISO (PMID:20724479) UniProtKB PMID:20724479 NCBI chr11:888,660...930,901
Ensembl chr11:929,278...977,082
JBrowse link
G CUEDC2 CUE domain containing 2 ISO (PMID:24882011)
(MGI:5576401|PMID:24882011)
MGI PMID:24882011 MGI:5576401 NCBI chr10:99,026,735...99,036,175
Ensembl chr10:102,492,412...102,502,107
JBrowse link
G F2 coagulation factor II, thrombin ISO (PMID:20421939) UniProtKB PMID:20421939 NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157
JBrowse link
G IL1R2 interleukin 1 receptor type 2 ISO (MGI:5468848|PMID:23395675) MGI PMID:23395675 MGI:5468848 Ensembl chr2A:103,042,328...103,078,190 JBrowse link
G LILRB4 leukocyte immunoglobulin like receptor B4 ISO (PMID:19380766) ARUK-UCL PMID:19380766 NCBI chr19:51,606,681...51,612,751 JBrowse link
G MACIR macrophage immunometabolism regulator ISO (MGI:5698579|PMID:26316022) MGI PMID:26316022 MGI:5698579 NCBI chr 5:98,612,892...98,632,854
Ensembl chr 5:104,330,232...104,330,852
JBrowse link
G MEFV MEFV innate immuity regulator, pyrin ISO (PMID:26347139) UniProtKB PMID:26347139 NCBI chr16:2,175,858...2,191,056
Ensembl chr16:3,353,666...3,368,970
JBrowse link
G NLRC3 NLR family CARD domain containing 3 ISO (MGI:5568884|PMID:24560620) UniProt PMID:24560620 MGI:5568884 NCBI chr16:2,463,940...2,487,961
Ensembl chr16:3,637,612...3,674,088
JBrowse link
G NLRP7 NLR family pyrin domain containing 7 ISO (PMID:15817483) UniProtKB PMID:15817483 NCBI chr19:51,966,886...51,990,971
Ensembl chr19:60,662,184...60,677,844
JBrowse link
G PDCD4 programmed cell death 4 ISO (MGI:3707264|PMID:17114484), (MGI:4438829|PMID:19946272) BHF-UCL PMID:17114484 PMID:19946272 MGI:3707264 MGI:4438829 NCBI chr10:107,465,084...107,493,285
Ensembl chr10:110,914,222...110,942,394
JBrowse link
G PLA2G10 phospholipase A2 group X ISO (MGI:5779244|PMID:26828067) MGI PMID:26828067 MGI:5779244 NCBI chr16:13,600,152...13,622,629 JBrowse link
G PPARA peroxisome proliferator activated receptor alpha ISO (PMID:31574452) ARUK-UCL PMID:31574452 Ensembl chr22:45,218,364...45,302,970 JBrowse link
G PYCARD PYD and CARD domain containing ISO (PMID:24531343) UniProt PMID:24531343 NCBI chr16:23,764,386...23,765,732
Ensembl chr16:31,571,363...31,573,828
JBrowse link
G SIRPA signal regulatory protein alpha ISO (MGI:6189251|PMID:23562609)
(MGI:3760575|PMID:17954568)
ARUK-UCL PMID:17954568 PMID:23562609 MGI:3760575 MGI:6189251 NCBI chr20:2,006,994...2,052,894
Ensembl chr20:1,773,271...1,818,106
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A ISO (MGI:5142149|PMID:21616078) UniProt PMID:21616078 MGI:5142149 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
negative regulation of cytoplasmic translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB1 cytoplasmic polyadenylation element binding protein 1 ISO (PMID:18752464)
(MGI:5543770|PMID:18752464)
UniProtKB
UniProt
PMID:18752464 MGI:5543770 NCBI chr15:62,949,264...63,053,994
Ensembl chr15:80,443,096...80,526,948
JBrowse link
G CPEB2 cytoplasmic polyadenylation element binding protein 2 ISO (PMID:18752464)
(MGI:5543770|PMID:18752464)
UniProtKB
UniProt
PMID:18752464 MGI:5543770 NCBI chr 4:9,431,573...9,499,036 JBrowse link
G FMR1 FMRP translational regulator 1 ISO (MGI:5767073|PMID:11376146) UniProt PMID:11376146 MGI:5767073 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G RBM24 RNA binding motif protein 24 ISO (PMID:29358667) UniProtKB PMID:29358667 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G UNK unk zinc finger ISO (PMID:25737280) GO_Central PMID:25737280 NCBI chr17:69,735,509...69,776,345
Ensembl chr17:75,285,922...75,326,427
JBrowse link
negative regulation of cytoplasmic translational elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 ISO (MGI:5314154|PMID:22157746) UniProt PMID:22157746 MGI:5314154 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089
JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 ISO (PMID:32354837) UniProt PMID:32354837 NCBI chr22:12,463,859...12,515,953
Ensembl chr22:30,322,502...30,378,322
JBrowse link
negative regulation of dendritic cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAK3 Janus kinase 3 ISO (MGI:3719947|PMID:16020505) BHF-UCL PMID:16020505 MGI:3719947 NCBI chr19:17,299,129...17,330,700
Ensembl chr19:18,283,560...18,300,964
JBrowse link
negative regulation of DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase ISO (PMID:21496894) UniProtKB PMID:21496894 NCBI chr12:8,688,392...8,699,008
Ensembl chr12:8,904,273...8,913,917
JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO (MGI:5285126|PMID:21496894) UniProt PMID:21496894 MGI:5285126 NCBI chr12:7,777,734...7,793,960
Ensembl chr12:7,939,262...7,944,203
JBrowse link
G TET1 tet methylcytosine dioxygenase 1 ISO (PMID:21496894) UniProtKB PMID:21496894 NCBI chr10:65,036,313...65,168,051
Ensembl chr10:67,586,586...67,703,160
JBrowse link
negative regulation of DNA-templated transcription, elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPT4H1 SPT4 homolog, DSIF elongation factor subunit ISO (PMID:9450929), (PMID:9857195) UniProtKB PMID:9450929 PMID:9857195 NCBI chr17:52,420,503...52,427,514 JBrowse link
G SUPT5H SPT5 homolog, DSIF elongation factor subunit ISO (PMID:10075709)
(PMID:9450929)
UniProtKB PMID:9450929 PMID:10075709 NCBI chr19:36,543,998...36,575,161
Ensembl chr19:45,092,075...45,122,335
JBrowse link
negative regulation of DNA-templated transcription, initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MORC1 MORC family CW-type zinc finger 1 ISO (MGI:5694015|PMID:25503965) MGI PMID:25503965 MGI:5694015 NCBI chr 3:106,091,990...106,251,790
Ensembl chr 3:113,021,874...113,180,331
JBrowse link
G THRA thyroid hormone receptor alpha ISO (PMID:8524305) UniProtKB PMID:8524305 NCBI chr17:17,196,459...17,226,263 JBrowse link
negative regulation of DNA-templated transcription, termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PER2 period circadian regulator 2 ISO (MGI:5430667|PMID:22767893) UniProt PMID:22767893 MGI:5430667 NCBI chr2B:125,477,021...125,521,577
Ensembl chr2B:244,328,122...244,371,040
JBrowse link
negative regulation of endothelin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PTGER4 prostaglandin E receptor 4 ISO RGD PMID:15560120 RGD:10043380 NCBI chr 5:69,686,906...69,700,739
Ensembl chr 5:74,731,470...74,745,148
JBrowse link
negative regulation of fibroblast growth factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGFR1 fibroblast growth factor receptor 1 ISO (MGI:5548021|PMID:24259513) MGI PMID:24259513 MGI:5548021 NCBI chr 8:37,713,133...37,773,098
Ensembl chr 8:34,890,147...34,948,904
JBrowse link
G FGFR4 fibroblast growth factor receptor 4 ISO (MGI:5548021|PMID:24259513) MGI PMID:24259513 MGI:5548021 NCBI chr 5:172,386,443...172,400,271
Ensembl chr 5:179,454,995...179,467,605
JBrowse link
G RGCC regulator of cell cycle ISO (PMID:19652095) BHF-UCL PMID:19652095 NCBI chr13:22,639,289...22,652,594
Ensembl chr13:41,228,643...41,241,909
JBrowse link
G WNT11 Wnt family member 11 ISO (MGI:3775898|PMID:18191119) MGI PMID:18191119 MGI:3775898 NCBI chr11:71,239,781...71,263,915
Ensembl chr11:74,540,169...74,560,024
JBrowse link
negative regulation of formation of translation preinitiation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPL13A ribosomal protein L13a ISO (PMID:17218275) UniProtKB PMID:17218275 NCBI chr19:46,485,729...46,504,928
Ensembl chr19:55,423,866...55,428,598
JBrowse link
negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NACC2 NACC family member 2 ISO (PMID:22926524) BHF-UCL PMID:22926524 NCBI chr 9:107,079,113...107,168,332
Ensembl chr 9:136,066,229...136,105,176
JBrowse link
negative regulation of gene expression, epigenetic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMI1 BMI1 proto-oncogene, polycomb ring finger ISO (PMID:24623306) UniProtKB PMID:24623306 NCBI chr10:22,477,755...22,487,894 JBrowse link
G CREBZF CREB/ATF bZIP transcription factor ISO (PMID:15705566) UniProtKB PMID:15705566 NCBI chr11:80,713,916...80,721,085
Ensembl chr11:84,322,496...84,329,636
JBrowse link
G DNMT3B DNA methyltransferase 3 beta ISO (MGI:3765099|PMID:18056424) UniProt PMID:18056424 MGI:3765099 NCBI chr20:29,049,993...29,096,957
Ensembl chr20:30,186,069...30,215,487
JBrowse link
G EPC1 enhancer of polycomb homolog 1 ISO (PMID:10976108) MGI PMID:10976108 NCBI chr10:32,398,557...32,509,146
Ensembl chr10:32,985,456...33,095,070
JBrowse link
G EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit ISO (PMID:20154697)
(PMID:24623306)
UniProtKB PMID:20154697 PMID:24623306 NCBI chr 7:140,536,962...140,613,104
Ensembl chr 7:153,017,590...153,059,726
JBrowse link
G LHX2 LIM homeobox 2 ISO (MGI:5817507|PMID:28053041) UniProt PMID:28053041 MGI:5817507 NCBI chr 9:95,132,445...95,154,130
Ensembl chr 9:123,655,845...123,676,796
JBrowse link
G LOC100974647 core histone macro-H2A.2 ISO (PMID:19734898) UniProtKB PMID:19734898 NCBI chr10:66,526,013...66,585,568
Ensembl chr10:69,077,456...69,114,194
JBrowse link
G LOC100974858 core histone macro-H2A.1 ISO (PMID:19734898), (PMID:23595991), (PMID:24071584) UniProtKB PMID:19734898 PMID:23595991 PMID:24071584 NCBI chr 5:130,727,065...130,791,932
Ensembl chr 5:136,868,521...136,933,834
JBrowse link
G MORC2 MORC family CW-type zinc finger 2 ISO (PMID:28581500), (PMID:29211708) UniProt PMID:28581500 PMID:29211708 NCBI chr22:11,912,043...11,995,497
Ensembl chr22:29,753,241...29,795,632
JBrowse link
G MPHOSPH8 M-phase phosphoprotein 8 ISO (PMID:26022416), (PMID:28581500), (PMID:29211708) UniProt PMID:26022416 PMID:28581500 PMID:29211708 NCBI chr13:932,620...999,853
Ensembl chr13:19,278,149...19,316,389
JBrowse link
G PPHLN1 periphilin 1 ISO (PMID:26022416), (PMID:28581500) UniProt PMID:26022416 PMID:28581500 NCBI chr12:46,271,425...46,392,128
Ensembl chr12:47,125,110...47,256,615
JBrowse link
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D ISO (PMID:23242139) UniProtKB PMID:23242139 NCBI chr17:54,698,338...54,761,889
Ensembl chr17:59,824,566...59,887,015
JBrowse link
G SPI1 Spi-1 proto-oncogene ISO (PMID:20139074) UniProtKB PMID:20139074 NCBI chr11:47,301,245...47,326,891
Ensembl chr11:47,853,991...47,880,259
JBrowse link
G TASOR transcription activation suppressor ISO (PMID:26022416), (PMID:28581500), (PMID:29211708) UniProt PMID:26022416 PMID:28581500 PMID:29211708 NCBI chr 3:56,555,945...56,619,151
Ensembl chr 3:57,771,656...57,834,077
JBrowse link
G TRIM27 tripartite motif containing 27 ISO (PMID:10976108) MGI PMID:10976108 NCBI chr 6:28,722,505...28,743,484
Ensembl chr 6:29,390,423...29,411,308
JBrowse link
negative regulation of gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DND1 DND microRNA-mediated repression inhibitor 1 ISO (PMID:18155131) UniProtKB PMID:18155131 NCBI chr 5:136,035,464...136,038,524
Ensembl chr 5:142,151,441...142,154,262
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 ISO (PMID:26595526)
(PMID:27089893)
UniProtKB
BHF-UCL
PMID:26595526 PMID:27089893 NCBI chr19:7,259,829...7,306,808
Ensembl chr19:8,114,849...8,147,137
JBrowse link
G POU5F1 POU class 5 homeobox 1 ISO (PMID:19409607) UniProtKB PMID:19409607 NCBI chr 6:30,910,421...30,916,465
Ensembl chr 6:31,775,343...31,781,426
JBrowse link
G PPARG peroxisome proliferator activated receptor gamma ISO (PMID:28522568) BHF-UCL PMID:28522568 NCBI chr 3:12,215,322...12,361,669
Ensembl chr 3:12,622,397...12,705,060
JBrowse link
G TGFB1 transforming growth factor beta 1 ISO (PMID:22269326) BHF-UCL PMID:22269326 NCBI chr19:38,324,009...38,347,003
Ensembl chr19:46,831,659...46,852,973
JBrowse link
negative regulation of granulocyte colony-stimulating factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAVCR2 hepatitis A virus cellular receptor 2 ISO (PMID:26492563) UniProtKB PMID:26492563 NCBI chr 5:152,486,125...152,514,004
Ensembl chr 5:159,108,915...159,131,007
JBrowse link
negative regulation of granulocyte macrophage colony-stimulating factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD84 CD84 molecule ISO (PMID:22068234) UniProtKB PMID:22068234 NCBI chr 1:135,901,375...135,934,791
Ensembl chr 1:139,819,254...139,857,559
JBrowse link
negative regulation of hepatocyte growth factor production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INHBB inhibin subunit beta B ISO (PMID:12419948) UniProt PMID:12419948 NCBI chr2B:7,278,944...7,284,632 JBrowse link
negative regulation of immunoglobulin production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CD22 CD22 molecule ISO (MGI:4453395|PMID:20200274) ARUK-UCL PMID:20200274 MGI:4453395 NCBI chr19:32,265,278...32,294,122
Ensembl chr19:41,012,222...41,030,713
JBrowse link
G CR1 complement C3b/C4b receptor 1 (Knops blood group) ISO (PMID:22962438) ARUK-UCL PMID:22962438 NCBI chr 1:183,094,601...183,246,957 JBrowse link
G FCGR2B Fc fragment of IgG receptor IIb ISO (MGI:3608295|PMID:12385742) MGI PMID:12385742 MGI:3608295 NCBI chr 1:137,074,342...137,090,962 JBrowse link