Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:miRNA catabolic process
go back to main search page
Accession:GO:0010587 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of miRNA, microRNA, a class of single-stranded RNA molecules of about 21-23 nucleotides in length, which regulates gene expression.
Synonyms:exact_synonym: microRNA catabolic process


show annotations for term's descendants           Sort by:
 
miRNA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 IDA
IBA
ISS
(PMID:24141620)
(PMID:21873635)
UniProtKB
GO_Central
PMID:21873635, PMID:24141620 GO_REF:0000024 NCBI chr 2:231,961,713...232,344,350
Ensembl chr 2:231,961,245...232,344,350
JBrowse link
G LIN28A lin-28 homolog A IMP (PMID:18951094), (PMID:19703396) UniProtKB PMID:18951094, PMID:19703396 NCBI chr 1:26,410,778...26,429,728
Ensembl chr 1:26,410,817...26,429,728
JBrowse link
G LIN28B lin-28 homolog B IMP (PMID:19703396) UniProtKB PMID:19703396 NCBI chr 6:104,936,999...105,083,332
Ensembl chr 6:104,936,616...105,083,332
JBrowse link
G PARN poly(A)-specific ribonuclease IDA (PMID:25049417) UniProtKB PMID:25049417 NCBI chr16:14,435,701...14,630,286
Ensembl chr16:14,435,700...14,632,728
JBrowse link
G SND1 staphylococcal nuclease and tudor domain containing 1 IDA (PMID:28546213) UniProtKB PMID:28546213 NCBI chr 7:127,652,145...128,092,593
Ensembl chr 7:127,652,194...128,092,609
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B IDA (PMID:25049417) UniProtKB PMID:25049417 NCBI chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
JBrowse link
G TUT4 terminal uridylyl transferase 4 IMP (PMID:19703396) UniProtKB PMID:19703396 NCBI chr 1:52,423,275...52,553,463
Ensembl chr 1:52,408,282...52,553,487
JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT2 terminal nucleotidyltransferase 2 IDA (PMID:23200856) UniProtKB PMID:23200856 NCBI chr 5:79,612,421...79,688,246
Ensembl chr 5:79,612,120...79,686,648
JBrowse link
positive regulation of miRNA catabolic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIN28B lin-28 homolog B IMP (PMID:18951094) CACAO PMID:18951094 NCBI chr 6:104,936,999...105,083,332
Ensembl chr 6:104,936,616...105,083,332
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 IDA (PMID:20547861) UniProtKB PMID:20547861 NCBI chr 2:55,634,061...55,693,853
Ensembl chr 2:55,634,061...55,693,863
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A IDA (PMID:22055188), (PMID:24048733) UniProtKB PMID:22055188, PMID:24048733 NCBI chr 1:37,474,518...37,484,377
Ensembl chr 1:37,474,580...37,484,377
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18651
    metabolic process 12286
      primary metabolic process 10997
        nucleobase-containing compound metabolic process 5975
          nucleobase-containing compound catabolic process 580
            RNA catabolic process 436
              ncRNA catabolic process 39
                miRNA catabolic process 10
                  negative regulation of miRNA catabolic process 1
                  positive regulation of miRNA catabolic process 3
                  regulation of miRNA catabolic process + 4
Path 2
Term Annotations click to browse term
  biological_process 18651
    metabolic process 12286
      cellular metabolic process 11268
        cellular aromatic compound metabolic process 6226
          nucleobase-containing compound metabolic process 5975
            nucleic acid metabolic process 5426
              RNA metabolic process 4898
                ncRNA metabolic process 509
                  miRNA metabolic process 32
                    miRNA catabolic process 10
                      negative regulation of miRNA catabolic process 1
                      positive regulation of miRNA catabolic process 3
                      regulation of miRNA catabolic process + 4
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.