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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of autophagy
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Accession:GO:0010506 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.



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regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer2 alkaline ceramidase 2 involved_in ISO (PMID:28294157) RGD PMID:28294157 NCBI chr 5:101,391,830...101,442,615
Ensembl chr 5:101,391,885...101,442,614
JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO (PMID:23878245)
(MGI:5509101|PMID:23878245)
RGD PMID:23878245 MGI:5509101 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in ISO (MGI:5310718|PMID:22258505) RGD PMID:22258505 MGI:5310718 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:16799551)
(PMID:16799551), (PMID:18797192)
RGD PMID:16799551 PMID:18797192 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Bok BCL2 family apoptosis regulator BOK involved_in ISO (PMID:24113155) RGD PMID:24113155 NCBI chr 9:94,223,493...94,234,476
Ensembl chr 9:94,223,389...94,234,476
JBrowse link
G Casp1 caspase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2158744 (MGI:5577214|PMID:24581500)
GO_REF:0000107
RGD
Ensembl
PMID:24581500 GO_REF:0000107 MGI:5577214 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (MGI:3851235|PMID:17683935) RGD PMID:17683935 MGI:3851235 NCBI chr 3:143,170,822...143,211,376
Ensembl chr 3:143,170,902...143,210,844
JBrowse link
G Cisd1 CDGSH iron sulfur domain 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:17,255,302...17,268,688
Ensembl chr20:17,255,151...17,284,924
JBrowse link
G Cisd2 CDGSH iron sulfur domain 2 involved_in ISO (PMID:20010695) RGD PMID:20010695 NCBI chr 2:223,828,937...223,853,768
Ensembl chr 2:223,828,937...223,868,946
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:5784638|PMID:27101989) RGD PMID:27101989 MGI:5784638 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Cryba1 crystallin, beta A1 IMP RGD PMID:21266465 RGD:126925759 NCBI chr10:62,608,373...62,614,726
Ensembl chr10:62,608,383...62,614,726
JBrowse link
G Dcaf12 DDB1 and CUL4 associated factor 12 acts_upstream_of ISO (PMID:31267705) RGD PMID:31267705 NCBI chr 5:56,460,418...56,482,171
Ensembl chr 5:56,461,006...56,482,456
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 involved_in IMP PMID:28694771 UniProt PMID:28694771 RGD:14390049 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Depp1 DEPP autophagy regulator 1 involved_in ISO
IBA
IEA
(PMID:28545464)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:28545464 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 4:149,910,794...149,913,013
Ensembl chr 4:149,910,779...149,914,542
JBrowse link
G Dram1 DNA-damage regulated autophagy modulator 1 involved_in ISO
IBA
(PMID:19895784)
PMID:21873635
RGD PMID:19895784 PMID:21873635 RGD:13792537 NCBI chr 7:22,742,794...22,776,888
Ensembl chr 7:22,742,849...22,776,765
JBrowse link
G Dram2 DNA damage regulated autophagy modulator 2 involved_in ISO
IEA
IBA
(PMID:19895784)
GO_REF:0000002
PMID:21873635
RGD
InterPro
PMID:19895784 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 2:194,035,624...194,064,415
Ensembl chr 2:194,035,818...194,063,403
JBrowse link
G Ercc4 ERCC excision repair 4, endonuclease catalytic subunit acts_upstream_of_or_within ISO MGI:3028660 (MGI:3797328|PMID:18443001) RGD PMID:18443001 MGI:3797328 NCBI chr10:2,416,259...2,448,364
Ensembl chr10:2,419,038...2,448,369
JBrowse link
G Fbxl2 F-box and leucine-rich repeat protein 2 involved_in ISO (PMID:23604317) RGD PMID:23604317 NCBI chr 8:113,916,660...113,965,137
Ensembl chr 8:113,913,373...113,965,066
JBrowse link
G Gpr137 G protein-coupled receptor 137 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:204,129,636...204,132,622
Ensembl chr 1:204,129,636...204,133,082
JBrowse link
G Gpr137b G protein-coupled receptor 137B involved_in IBA
ISO
PMID:21873635
(PMID:31036939)
RGD PMID:31036939 PMID:21873635 RGD:13792537 NCBI chr17:86,003,630...86,041,841
Ensembl chr17:85,966,921...86,041,835
JBrowse link
G Kat8 lysine acetyltransferase 8 acts_upstream_of_or_within ISO (PMID:23863932) RGD PMID:23863932 NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633
JBrowse link
G Keap1 Kelch-like ECH-associated protein 1 involved_in ISO
ISS
(PMID:20452972)
(MGI:4819475|PMID:20421418), (MGI:5009358|PMID:20173742)
GO_REF:0000024
RGD
UniProt
PMID:20173742 PMID:20421418 PMID:20452972 GO_REF:0000024 MGI:4819475 MGI:5009358 NCBI chr 8:19,768,375...19,777,862
Ensembl chr 8:19,768,375...19,777,862
JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 involved_in ISO (PMID:25681212) RGD PMID:25681212 NCBI chr11:81,153,491...81,224,643
Ensembl chr11:81,193,649...81,221,784
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta involved_in ISO (MGI:5645828|PMID:25915474) RGD PMID:25915474 MGI:5645828 NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:24211199) RGD PMID:24211199 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mapk15 mitogen-activated protein kinase 15 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22948227)
UniProt
Ensembl
RGD
PMID:22948227 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:107,694,907...107,714,640
Ensembl chr 7:107,694,964...107,714,645
JBrowse link
G Mapt microtubule-associated protein tau acts_upstream_of_or_within ISO UniProtKB:O15118 (PMID:19074461) RGD PMID:19074461 NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 acts_upstream_of_or_within ISO MGI:4456699 (MGI:5751614|PMID:26681805) RGD PMID:26681805 MGI:5751614 NCBI chr 2:123,822,042...123,882,913
Ensembl chr 2:123,816,614...123,857,971
JBrowse link
G Mtcl1 microtubule crosslinking factor 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:106,305,282...106,441,782
Ensembl chr 9:106,321,098...106,442,203
JBrowse link
G Mtmr3 myotubularin related protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:79,340,523...79,460,947
Ensembl chr14:79,340,513...79,461,041
JBrowse link
G Mtmr4 myotubularin related protein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:72,393,411...72,416,342
Ensembl chr10:72,392,551...72,416,342
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:5528770|PMID:24011591)
UniProt
RGD
PMID:24011591 GO_REF:0000024 MGI:5528770 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Nlrp6 NLR family, pyrin domain containing 6 acts_upstream_of_or_within ISO MGI:5085850 (MGI:5577214|PMID:24581500) RGD PMID:24581500 MGI:5577214 NCBI chr 1:196,004,854...196,011,615
Ensembl chr 1:196,004,953...196,011,113
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in IMP PMID:28694771 UniProt PMID:28694771 RGD:14390049 NCBI chr 1:181,213,292...181,215,327 JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in ISO (PMID:16799551) RGD PMID:16799551 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 involved_in ISO
IEA
ISS
(PMID:23604317)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:23604317 GO_REF:0000024 GO_REF:0000107 NCBI chr16:18,665,517...18,674,067
Ensembl chr16:18,665,457...18,674,065
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 involved_in ISO (PMID:16799551) RGD PMID:16799551 NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:6159303|PMID:29727621)
(PMID:25578879)
UniProt
RGD
PMID:25578879 PMID:29727621 GO_REF:0000024 MGI:6159303 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029
JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISS
ISO
GO_REF:0000024
(MGI:6159303|PMID:29727621)
(PMID:25578879)
UniProt
RGD
PMID:25578879 PMID:29727621 GO_REF:0000024 MGI:6159303 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO (PMID:25578879) RGD PMID:25578879 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
ISS
(PMID:20889974)
GO_REF:0000024
RGD
UniProt
PMID:20889974 GO_REF:0000024 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
JBrowse link
G Pycard PYD and CARD domain containing acts_upstream_of_or_within ISO MGI:3686870 (MGI:5577214|PMID:24581500) RGD PMID:24581500 MGI:5577214 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
JBrowse link
G Rab8a RAB8A, member RAS oncogene family involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27103069)
UniProt
Ensembl
RGD
PMID:27103069 GO_REF:0000024 GO_REF:0000107 NCBI chr16:17,654,027...17,675,385
Ensembl chr16:17,654,034...17,675,678
JBrowse link
G RGD1359108 similar to RIKEN cDNA 3110043O21 involved_in ISO
ISS
(PMID:27103069)
(MGI:5810480|PMID:27617292), (MGI:5811684|PMID:27875531), (MGI:5887182|PMID:27193190)
GO_REF:0000024
RGD
UniProt
PMID:27103069 PMID:27193190 PMID:27617292 PMID:27875531 GO_REF:0000024 MGI:5810480 MGI:5811684 MGI:5887182 NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
JBrowse link
G Rmc1 regulator of MON1-CCZ1 involved_in IBA
ISO
PMID:21873635
(PMID:29038162)
RGD PMID:29038162 PMID:21873635 RGD:13792537 NCBI chr18:3,359,848...3,379,764
Ensembl chr18:3,359,832...3,380,795
JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:104,878,487...105,176,986
Ensembl chr10:104,878,487...105,176,983
JBrowse link
G Rraga Ras-related GTP binding A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:101,113,341...101,114,936
Ensembl chr 5:101,112,859...101,114,510
JBrowse link
G RragB Ras-related GTP binding B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:18,184,619...18,234,639
Ensembl chr  X:18,184,992...18,234,639
JBrowse link
G Rragc Ras-related GTP binding C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:136,148,239...136,167,773
Ensembl chr 5:136,148,276...136,167,767
JBrowse link
G Rragd Ras-related GTP binding D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:47,373,902...47,409,369
Ensembl chr 5:47,373,463...47,409,356
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:27103069)
(MGI:5810480|PMID:27617292)
RGD PMID:27103069 PMID:27617292 MGI:5810480 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
JBrowse link
G Soga1 suppressor of glucose, autophagy associated 1 involved_in ISO (MGI:4837302|PMID:20813965) RGD PMID:20813965 MGI:4837302 NCBI chr 3:145,669,102...145,741,578
Ensembl chr 3:145,675,443...145,740,871
JBrowse link
G Soga3 SOGA family member 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:28,629,036...28,701,416
Ensembl chr 1:28,620,293...28,701,796
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO UniProtKB:Q5S007 (PMID:22012985) RGD PMID:22012985 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236
JBrowse link
G Trib3 tribbles pseudokinase 3 involved_in IMP PMID:28694771 UniProt PMID:28694771 RGD:14390049 NCBI chr 3:140,809,634...140,815,230
Ensembl chr 3:140,809,043...140,814,497
JBrowse link
G Usp10 ubiquitin specific peptidase 10 involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:21962518)
PMID:21873635
UniProt
RGD
PMID:21962518 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr19:47,972,858...48,014,900
Ensembl chr19:47,972,611...48,014,897
JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in ISO (PMID:21962518) RGD PMID:21962518 NCBI chr 2:115,576,912...115,689,153
Ensembl chr 2:115,577,091...115,686,222
JBrowse link
G Usp33 ubiquitin specific peptidase 33 involved_in ISO (PMID:24056301) RGD PMID:24056301 NCBI chr 2:241,283,209...241,328,479
Ensembl chr 2:241,292,985...241,328,479
JBrowse link
G Uvrag UV radiation resistance associated involved_in ISO (PMID:16799551) RGD PMID:16799551 NCBI chr 1:153,185,356...153,442,200
Ensembl chr 1:153,185,395...153,442,136
JBrowse link
G Vps29 VPS29 retromer complex component NOT|involved_in ISO (PMID:24603492) RGD PMID:24603492 NCBI chr12:34,208,911...34,217,977
Ensembl chr12:34,207,263...34,217,964
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301
JBrowse link
G Wdr24 WD repeat domain 24 involved_in ISO (PMID:27166823) RGD PMID:27166823 NCBI chr10:14,844,089...14,848,871
Ensembl chr10:14,843,728...14,848,864
JBrowse link
G Wdr41 WD repeat domain 41 involved_in ISO (PMID:27103069) RGD PMID:27103069 NCBI chr 2:26,222,797...26,273,840
Ensembl chr 2:26,224,495...26,273,836
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5573106|PMID:24753614)
UniProt
RGD
PMID:24753614 GO_REF:0000024 MGI:5573106 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Xpa XPA, DNA damage recognition and repair factor acts_upstream_of_or_within ISO MGI:1857939 (MGI:3797328|PMID:18443001) RGD PMID:18443001 MGI:3797328 NCBI chr 5:60,431,673...60,476,438
Ensembl chr 5:60,431,673...60,475,726
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (MGI:3797328|PMID:18443001) RGD PMID:18443001 MGI:3797328 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
negative regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Becn1 beclin 1 acts_upstream_of_or_within ISO MGI:2683833 (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in ISO (PMID:21975012) RGD PMID:21975012 NCBI chr 3:143,170,822...143,211,376
Ensembl chr 3:143,170,902...143,210,844
JBrowse link
G Ehmt2 euchromatic histone lysine methyltransferase 2 acts_upstream_of_or_within ISO (MGI:5543871|PMID:23918802) RGD PMID:23918802 MGI:5543871 NCBI chr20:3,919,623...3,936,751
Ensembl chr20:3,919,624...3,941,547
JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 involved_in ISO
ISS
(PMID:25495476)
GO_REF:0000024
RGD
GO_Central
PMID:25495476 GO_REF:0000024 NCBI chr 8:36,544,462...36,589,684
Ensembl chr 8:36,544,535...36,589,683
JBrowse link
G Fez2 fasciculation and elongation protein zeta 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:25495476)
GO_Central
RGD
PMID:25495476 GO_REF:0000024 NCBI chr 6:16,654,572...16,694,628
Ensembl chr 6:16,654,614...16,694,626
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in IBA
ISO
PMID:21873635
(PMID:23916833)
RGD PMID:23916833 PMID:21873635 RGD:13792537 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mtm1 myotubularin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2450997 (MGI:5510937|PMID:23695157)
RGD PMID:23695157 PMID:21873635 MGI:5510937, RGD:13792537 NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO
GO_REF:0000024
(PMID:20181828)
UniProt
RGD
PMID:20181828 GO_REF:0000024 NCBI chr 1:181,213,292...181,215,327 JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
IBA
ISS
(PMID:25484098)
PMID:21873635
GO_REF:0000024
RGD
GO_Central
PMID:25484098 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:54,718,608...54,722,784
Ensembl chr10:54,717,724...54,722,782
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Scfd1 sec1 family domain containing 1 involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 6:68,795,810...68,874,076
Ensembl chr 6:68,795,878...68,874,078
JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein involved_in ISO (PMID:21242315) RGD PMID:21242315 NCBI chr 2:185,500,029...185,520,811
Ensembl chr 2:185,500,004...185,522,026
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
JBrowse link
G Tmem39a transmembrane protein 39a involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:31806350)
UniProt
RGD
PMID:31806350 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964
JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
ISS
IBA
(PMID:25484098)
GO_REF:0000024
PMID:21873635
RGD
GO_Central
PMID:25484098 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:54,718,608...54,722,784
Ensembl chr10:54,717,724...54,722,782
JBrowse link
G Rubcn rubicon autophagy regulator involved_in IBA
ISO
PMID:21873635
(PMID:21062745)
RGD PMID:21062745 PMID:21873635 RGD:13792537 NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314
JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO
IBA
ISS
(PMID:31806350)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:31806350 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964
JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO (PMID:23459205) RGD PMID:23459205 NCBI chr 2:174,012,726...174,028,062
Ensembl chr 2:174,012,777...174,028,059
JBrowse link
negative regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1a adrenoceptor alpha 1A acts_upstream_of_or_within ISO (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr15:40,830,125...40,935,902
Ensembl chr15:40,832,534...40,927,500
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:18387192) RGD PMID:18387192 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in ISO
ISS
(MGI:3796473|PMID:18281291)
GO_REF:0000024
(PMID:21358617)
RGD
UniProt
PMID:18281291 PMID:21358617 GO_REF:0000024 MGI:3796473 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Becn1 beclin 1 acts_upstream_of_or_within ISO (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Bmf Bcl2 modifying factor involved_in ISO
IBA
(PMID:23629966)
(MGI:5490676|PMID:23629966)
PMID:21873635
RGD PMID:23629966 PMID:21873635 MGI:5490676, RGD:13792537 NCBI chr 3:105,499,534...105,520,159
Ensembl chr 3:105,499,538...105,520,145
JBrowse link
G Cptp ceramide-1-phosphate transfer protein involved_in ISS
ISO
GO_REF:0000024
(PMID:29164996)
UniProt
RGD
PMID:29164996 GO_REF:0000024 NCBI chr 5:166,474,947...166,479,103
Ensembl chr 5:166,474,966...166,479,017
JBrowse link
G Dap death-associated protein involved_in IBA
ISO
PMID:21873635
(PMID:20537536)
RGD PMID:20537536 PMID:21873635 RGD:13792537 NCBI chr 2:82,199,206...82,251,771
Ensembl chr 2:82,199,280...82,251,752
JBrowse link
G Dapl1 death associated protein-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:43,960,993...43,980,940
Ensembl chr 3:43,960,810...43,980,940
JBrowse link
G Eif4e eukaryotic translation initiation factor 4E NOT|involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 NOT|involved_in ISO (PMID:18426977) RGD PMID:18426977 NCBI chr 5:150,197,410...150,418,363
Ensembl chr 5:150,195,226...150,418,363
JBrowse link
G Foxk1 forkhead box K1 involved_in ISO (PMID:25402684) RGD PMID:25402684 NCBI chr12:12,110,119...12,175,089
Ensembl chr12:12,115,950...12,175,089
JBrowse link
G Foxk2 forkhead box K2 involved_in ISO (MGI:5615527|PMID:25402684) RGD PMID:25402684 MGI:5615527 NCBI chr10:106,542,643...106,592,569
Ensembl chr10:106,542,566...106,592,563
JBrowse link
G Gata4 GATA binding protein 4 IMP RGD PMID:19901028 RGD:5131537 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Golga2 golgin A2 involved_in ISO (PMID:22735382) RGD PMID:22735382 NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279
JBrowse link
G Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 acts_upstream_of_or_within ISO MGI:3613033 (MGI:4461108|PMID:20041218) RGD PMID:20041218 MGI:4461108 NCBI chr 8:66,857,169...67,070,318
Ensembl chr 8:66,856,935...67,070,312
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:20099302)
UniProt
Ensembl
RGD
PMID:20099302 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:86,735,793...86,756,640
Ensembl chr 9:86,742,102...86,755,108
JBrowse link
G Il10 interleukin 10 involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il10ra interleukin 10 receptor subunit alpha involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr 8:45,563,009...45,578,041
Ensembl chr 8:45,563,137...45,578,061
JBrowse link
G Il3 interleukin 3 acts_upstream_of_or_within ISO (MGI:3575206|PMID:15680329) RGD PMID:15680329 MGI:3575206 NCBI chr10:38,405,716...38,408,066
Ensembl chr10:38,405,716...38,408,066
JBrowse link
G Izumo1 izumo sperm-egg fusion 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:96,090,817...96,096,893 JBrowse link
G Kdm4a lysine demethylase 4A involved_in ISO (PMID:25660547) RGD PMID:25660547 NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
JBrowse link
G Klhl22 kelch-like family member 22 involved_in ISS
ISO
GO_REF:0000024
(PMID:29769719)
UniProt
RGD
PMID:29769719 GO_REF:0000024 NCBI chr11:83,190,891...83,231,746
Ensembl chr11:83,190,891...83,231,770
JBrowse link
G Lep leptin involved_in ISO
ISS
(PMID:25060689)
(MGI:5705211|PMID:25060689)
GO_REF:0000024
RGD
UniProt
PMID:25060689 GO_REF:0000024 MGI:5705211 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Lepr leptin receptor involved_in ISO
ISS
(PMID:25060689)
GO_REF:0000024
RGD
UniProt
PMID:25060689 GO_REF:0000024 NCBI chr 5:116,294,409...116,477,904
Ensembl chr 5:116,289,823...116,475,908
JBrowse link
G Mcl1 MCL1 apoptosis regulator, BCL2 family member involved_in ISO (PMID:24113155) RGD PMID:24113155 NCBI chr 2:183,219,137...183,235,676
Ensembl chr 2:183,219,220...183,222,303
JBrowse link
G Mir223 microRNA 223 IDA RGD PMID:29608885 RGD:21408565 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mirlet7b microRNA let-7b involved_in ISO (PMID:26296645) RGD PMID:26296645 NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270
JBrowse link
G Mt3 metallothionein 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:4881636|PMID:20544854)
UniProt
RGD
PMID:20544854 GO_REF:0000024 MGI:4881636 NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
JBrowse link
G Mtmr9 myotubularin related protein 9 involved_in IBA
ISO
PMID:21873635
UniProtKB:Q96EF0-1 (PMID:22647598)
RGD PMID:22647598 PMID:21873635 RGD:13792537 NCBI chr15:37,769,161...37,791,195
Ensembl chr15:37,769,078...37,791,244
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in IMP
ISO
ISS
(MGI:5285135|PMID:21258367)
GO_REF:0000024
(PMID:22424946), (PMID:22576015), (PMID:30704899)
RGD
UniProt
PMID:21258367 PMID:22424946 PMID:22576015 PMID:30704899 PMID:24725502 GO_REF:0000024 MGI:5285135, RGD:10040964 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IMP RGD PMID:26601421 RGD:13781888 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO
IMP
GO_REF:0000024
(MGI:6283395|PMID:20181828)
(PMID:20181828)
UniProt
RGD
PMID:20181828 PMID:20181828 GO_REF:0000024 MGI:6283395, RGD:14390062 NCBI chr 1:181,213,292...181,215,327 JBrowse link
G Ptk2 protein tyrosine kinase 2 acts_upstream_of_or_within ISO (MGI:5888970|PMID:27994061) RGD PMID:27994061 MGI:5888970 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23991106) RGD PMID:23991106 NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
JBrowse link
G Rasip1 Ras interacting protein 1 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 1:96,097,078...96,109,564
Ensembl chr 1:96,091,074...96,109,562
JBrowse link
G Rnf5 ring finger protein 5 acts_upstream_of_or_within ISO MGI:3775796 (MGI:5469257|PMID:23093945) RGD PMID:23093945 MGI:5469257 NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985
JBrowse link
G Rraga Ras-related GTP binding A involved_in ISO
ISS
(PMID:25936802)
GO_REF:0000024
RGD
UniProt
PMID:25936802 GO_REF:0000024 NCBI chr 5:101,113,341...101,114,936
Ensembl chr 5:101,112,859...101,114,510
JBrowse link
G Rubcn rubicon autophagy regulator involved_in ISO (PMID:19270696) RGD PMID:19270696 NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314
JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:20543840)
UniProt
RGD
PMID:20543840 GO_REF:0000024 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Slc7a5 solute carrier family 7 member 5 IMP RGD PMID:25049270 RGD:151361107 NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823
JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:26962683) RGD PMID:26962683 NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
JBrowse link
G Tbc1d14 TBC1 domain family, member 14 involved_in IEA
ISO
GO_REF:0000107
(PMID:22613832)
Ensembl
RGD
PMID:22613832 GO_REF:0000107 NCBI chr14:74,172,652...74,272,182
Ensembl chr14:74,172,664...74,272,183
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO UniProtKB:P05067|UniProtKB:P49768 (MGI:5906931|PMID:28802038) RGD PMID:28802038 MGI:5906931 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:30902965) RGD PMID:30902965 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (MGI:5519172|PMID:23974797) RGD PMID:23974797 MGI:5519172 NCBI chr 9:105,722,779...105,830,836
Ensembl chr 9:105,722,899...105,733,009
JBrowse link
G Wdr6 WD repeat domain 6 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 8:109,268,079...109,274,504
Ensembl chr 8:109,268,079...109,274,499
JBrowse link
G Zkscan3 zinc finger with KRAB and SCAN domains 3 involved_in ISO (PMID:23434374) RGD PMID:23434374 NCBI chr17:43,217,168...43,232,828
Ensembl chr17:43,217,222...43,232,827
JBrowse link
negative regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Tspo translocator protein involved_in ISO (PMID:25470454)
(MGI:5689082|PMID:25470454)
RGD PMID:25470454 MGI:5689082 NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A involved_in ISO UniProtKB:P10619 (PMID:12505983)
(MGI:5700310|PMID:12505983)
RGD PMID:12505983 MGI:5700310 NCBI chr 3:153,569,106...153,574,983
Ensembl chr 3:153,568,381...153,576,215
JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:20697033) RGD PMID:20697033 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
negative regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO MGI:2429784 (MGI:5430482|PMID:20705711) RGD PMID:20705711 MGI:5430482 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:19640926) RGD PMID:19640926 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Lzts1 leucine zipper tumor suppressor 1 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr16:20,542,756...20,598,204
Ensembl chr16:20,542,809...20,598,203
JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3690270|PMID:16714284), (MGI:5563734|PMID:23274896)
PMID:21873635
(PMID:25327288)
RGD PMID:16714284 PMID:23274896 PMID:25327288 PMID:21873635 MGI:3690270 MGI:5563734, RGD:13792537 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Npc1 NPC intracellular cholesterol transporter 1 acts_upstream_of_or_within ISO MGI:1857409|MGI:1891828 (MGI:3723543|PMID:17468177) RGD PMID:17468177 MGI:3723543 NCBI chr18:3,379,482...3,425,100
Ensembl chr18:3,379,482...3,425,049
JBrowse link
G Nrbp2 nuclear receptor binding protein 2 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 7:107,798,642...107,805,230
Ensembl chr 7:107,799,497...107,805,230
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Poldip2 DNA polymerase delta interacting protein 2 acts_upstream_of_or_within ISO MGI:4044390 (MGI:5588624|PMID:24797518) RGD PMID:24797518 MGI:5588624 NCBI chr10:63,408,766...63,417,605
Ensembl chr10:63,407,213...63,417,605
JBrowse link
G Qsox1 quiescin sulfhydryl oxidase 1 involved_in ISO (PMID:24475161) RGD PMID:24475161 NCBI chr13:67,949,780...67,987,434
Ensembl chr13:67,949,780...67,987,459
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
JBrowse link
G Tsc1 TSC complex subunit 1 involved_in IMP PMID:23435171 ParkinsonsUK-UCL PMID:23435171 RGD:10448950 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Tsc2 TSC complex subunit 2 IMP RGD PMID:24599401 RGD:11568679 NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:22622177) RGD PMID:22622177 NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
JBrowse link
negative regulation of macroautophagy by TORC1 signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
JBrowse link
negative regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:19279012) RGD PMID:19279012 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Rnf41 ring finger protein 41 acts_upstream_of_or_within ISO MGI:1921624 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr 7:838,160...876,869
Ensembl chr 7:838,203...865,511
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:5319187 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:1857263 (MGI:5319065|PMID:22044588) RGD PMID:22044588 MGI:5319065 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Usp30 ubiquitin specific peptidase 30 IMP RGD PMID:24896179 RGD:13208875 NCBI chr12:42,501,345...42,555,311
Ensembl chr12:42,501,348...42,555,616
JBrowse link
negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vps13c vacuolar protein sorting 13 homolog C involved_in ISO
ISS
(PMID:26942284)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:26942284 GO_REF:0000024 NCBI chr 8:68,478,366...68,651,893
Ensembl chr 8:68,478,395...68,651,895
JBrowse link
positive regulation of aggrephagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag3 BAG cochaperone 3 involved_in ISO (PMID:18006506) RGD PMID:18006506 NCBI chr 1:183,103,038...183,126,862
Ensembl chr 1:183,102,871...183,126,858
JBrowse link
G Hspb8 heat shock protein family B (small) member 8 involved_in ISO (PMID:18006506) RGD PMID:18006506 NCBI chr12:40,176,405...40,205,002
Ensembl chr12:40,176,532...40,191,185
JBrowse link
G Htt huntingtin involved_in IEA
ISO
GO_REF:0000107
(PMID:25686248)
Ensembl
RGD
PMID:25686248 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
positive regulation of autophagosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsg arylsulfatase G involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr10:94,412,261...94,551,224
Ensembl chr10:94,447,399...94,542,941
JBrowse link
G Atg2a autophagy related 2A involved_in ISO (PMID:30952800), (PMID:31271352) RGD PMID:30952800 PMID:31271352 NCBI chr 1:203,542,559...203,562,242
Ensembl chr 1:203,542,559...203,562,242
JBrowse link
G Becn1 beclin 1 IMP RGD PMID:25561470 RGD:11561937 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 involved_in ISO (PMID:21072319) RGD PMID:21072319 NCBI chr 2:196,089,199...196,169,055
Ensembl chr 2:196,091,646...196,168,716
JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:25484098) RGD PMID:25484098 NCBI chr 3:16,223,367...16,264,261
Ensembl chr 3:16,223,367...16,264,154
JBrowse link
G Moap1 modulator of apoptosis 1 involved_in ISO (PMID:33783314)
(MGI:6810697|PMID:33783314)
RGD PMID:33783314 MGI:6810697 NCBI chr 6:121,882,565...121,884,500
Ensembl chr 6:121,882,366...121,898,643
JBrowse link
G Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha involved_in ISO
IEA
(PMID:25578879)
GO_REF:0000107
RGD
Ensembl
PMID:25578879 GO_REF:0000107 NCBI chr17:81,496,669...81,668,180
Ensembl chr17:81,496,670...81,668,029
JBrowse link
G Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta involved_in ISO (PMID:25578879) RGD PMID:25578879 NCBI chr10:82,706,016...82,734,938
Ensembl chr10:82,701,098...82,734,938
JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma involved_in ISO (PMID:25578879) RGD PMID:25578879 NCBI chr 7:63,020,004...63,035,086
Ensembl chr 7:63,020,000...63,035,078
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO
ISS
(PMID:25495476)
GO_REF:0000024
RGD
GO_Central
PMID:25495476 GO_REF:0000024 NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169
JBrowse link
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:25495476)
GO_Central
Ensembl
RGD
PMID:25495476 GO_REF:0000024 GO_REF:0000107 NCBI chr13:96,757,430...96,828,930
Ensembl chr13:96,757,460...96,829,478
JBrowse link
G Ralb RAS like proto-oncogene B involved_in ISO
IEA
(PMID:24056301)
GO_REF:0000107
RGD
Ensembl
PMID:24056301 GO_REF:0000107 NCBI chr13:30,588,036...30,624,199
Ensembl chr13:30,588,033...30,624,202
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 involved_in ISO (PMID:21068542)
(MGI:5634888|PMID:21068542)
RGD PMID:21068542 MGI:5634888 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
JBrowse link
G Snx18 sorting nexin 18 involved_in ISO (PMID:29437695) RGD PMID:29437695 NCBI chr 2:45,232,325...45,258,345
Ensembl chr 2:45,232,325...45,258,345
JBrowse link
G Snx30 sorting nexin family member 30 involved_in ISO
IBA
(PMID:32513819)
PMID:21873635
RGD PMID:32513819 PMID:21873635 RGD:13792537 NCBI chr 5:74,683,902...74,813,013
Ensembl chr 5:74,684,015...74,792,631
JBrowse link
G Snx4 sorting nexin 4 involved_in ISO
IBA
(PMID:32513819), (PMID:33468622)
PMID:21873635
RGD PMID:32513819 PMID:33468622 PMID:21873635 RGD:13792537 NCBI chr11:67,460,872...67,518,143
Ensembl chr11:67,460,870...67,518,174
JBrowse link
G Snx7 sorting nexin 7 involved_in ISO
IBA
(PMID:32513819)
PMID:21873635
RGD PMID:32513819 PMID:21873635 RGD:13792537 NCBI chr 2:205,843,164...205,927,737
Ensembl chr 2:205,842,837...205,927,763
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 IMP RGD PMID:23448468 RGD:13208863 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Wdr45 WD repeat domain 45 involved_in ISO
IEA
ISS
(PMID:31271352)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:31271352 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:14,776,280...14,782,197
Ensembl chr  X:14,776,293...14,782,202
JBrowse link
G Wipi1 WD repeat domain, phosphoinositide interacting 1 involved_in ISO (PMID:31271352) RGD PMID:31271352 NCBI chr10:94,542,946...94,580,174
Ensembl chr10:94,542,946...94,579,846
JBrowse link
positive regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07025818.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:48,598,506...48,599,444 JBrowse link
G Adrb2 adrenoceptor beta 2 involved_in ISO
ISS
(PMID:23708524)
GO_REF:0000024
RGD
GO_Central
PMID:23708524 GO_REF:0000024 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Calcoco2 calcium binding and coiled-coil domain 2 involved_in ISO (PMID:25771791) RGD PMID:25771791 NCBI chr10:81,055,467...81,069,298 JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in ISO
IBA
(PMID:26468287)
PMID:21873635
RGD PMID:26468287 PMID:21873635 RGD:13792537 NCBI chr 8:123,412,105...123,479,315
Ensembl chr 8:123,412,112...123,479,021
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:16888103)
(MGI:3656111|PMID:16888103)
RGD PMID:16888103 MGI:3656111 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
JBrowse link
G Tom1 target of myb1 membrane trafficking protein involved_in ISO (PMID:23023224) RGD PMID:23023224 NCBI chr19:13,405,482...13,440,384
Ensembl chr19:13,405,501...13,440,384
JBrowse link
positive regulation of autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor IMP RGD PMID:22293957 RGD:7245565 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 involved_in IMP
ISO
(MGI:6810795|PMID:24980959)
(PMID:21358617), (PMID:31123703), (PMID:32333458)
RGD PMID:21358617 PMID:24980959 PMID:31123703 PMID:32333458 PMID:25117440 MGI:6810795, RGD:11552604 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Atf6 activating transcription factor 6 acts_upstream_of_or_within ISO (PMID:28747345) RGD PMID:28747345 NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177
JBrowse link
G Atg101 autophagy related 101 involved_in ISO (MGI:6810791|PMID:19225151) RGD PMID:19225151 MGI:6810791 NCBI chr 7:132,398,477...132,407,643
Ensembl chr 7:132,398,483...132,407,633
JBrowse link
G Atg13 autophagy related 13 involved_in ISO (MGI:6810791|PMID:19225151) RGD PMID:19225151 MGI:6810791 NCBI chr 3:77,647,069...77,681,028
Ensembl chr 3:77,645,790...77,681,043
JBrowse link
G Atg16l1 autophagy related 16-like 1 involved_in ISO (MGI:6271293|PMID:30208760) RGD PMID:30208760 MGI:6271293 NCBI chr 9:88,420,737...88,457,530
Ensembl chr 9:88,422,038...88,457,529
JBrowse link
G Atg7 autophagy related 7 IDA
IMP
RGD PMID:24674959 PMID:25639566 RGD:11553823, RGD:11553824 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Becn1 beclin 1 involved_in IMP
ISS
ISO
GO_REF:0000024
(PMID:21358617)
UniProt
RGD
PMID:21358617 PMID:24674959 GO_REF:0000024, RGD:11553823 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Ccny cyclin Y involved_in ISO (PMID:32098961) RGD PMID:32098961 NCBI chr17:57,385,002...57,512,860
Ensembl chr17:57,384,176...57,522,378
JBrowse link
G Cdk16 cyclin-dependent kinase 16 involved_in ISO
IEA
(PMID:32098961)
GO_REF:0000107
RGD
Ensembl
PMID:32098961 GO_REF:0000107 NCBI chr  X:1,492,814...1,504,309
Ensembl chr  X:1,492,814...1,504,148
JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:22095288) RGD PMID:22095288 NCBI chr17:3,930,223...4,090,991
Ensembl chr17:3,930,213...4,090,991
JBrowse link
G Dcn decorin involved_in ISO
IEA
(PMID:23798385)
GO_REF:0000002
RGD
InterPro
PMID:23798385 GO_REF:0000002 NCBI chr 7:32,281,252...32,321,291
Ensembl chr 7:32,281,252...32,321,270
JBrowse link
G Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:77,732,297...77,862,924
Ensembl chr14:77,732,297...77,862,794
JBrowse link
G Dhrsx dehydrogenase/reductase X-linked involved_in ISO
IBA
(PMID:25076851)
PMID:21873635
RGD PMID:25076851 PMID:21873635 RGD:13792537 NCBI chr12:16,299,768...16,304,553
Ensembl chr12:16,299,808...16,304,552
JBrowse link
G Endog endonuclease G involved_in ISO (PMID:33473107)
(MGI:6504770|PMID:33473107)
RGD PMID:33473107 MGI:6504770 NCBI chr 3:13,449,113...13,451,715
Ensembl chr 3:13,449,086...13,451,932
JBrowse link
G Flcn folliculin involved_in ISO
ISS
(PMID:25126726)
GO_REF:0000024
RGD
UniProt
PMID:25126726 GO_REF:0000024 NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769
JBrowse link
G Foxo1 forkhead box O1 involved_in ISO
ISS
(PMID:20543840)
GO_REF:0000024
RGD
UniProt
PMID:20543840 GO_REF:0000024 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Foxo3 forkhead box O3 involved_in ISO (MGI:3771642|PMID:18054316), (MGI:3771681|PMID:18054315) RGD PMID:18054315 PMID:18054316 MGI:3771642 MGI:3771681 NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:5319706|PMID:22539723)
UniProt
RGD
PMID:22539723 GO_REF:0000024 MGI:5319706 NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISS
ISO
GO_REF:0000024
RNAcentral:URS0000554A4F_10090 (MGI:5319706|PMID:22539723), (MGI:5825416|PMID:26160071)
UniProt
RGD
PMID:22539723 PMID:26160071 GO_REF:0000024 MGI:5319706 MGI:5825416 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in ISO (MGI:3796473|PMID:18281291) RGD PMID:18281291 MGI:3796473 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hmgb1 high mobility group box 1 involved_in IMP
ISO
(MGI:5634889|PMID:20819940)
(PMID:20819940)
RGD PMID:20819940 PMID:23604926 MGI:5634889, RGD:10402086 NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
JBrowse link
G Hpse heparanase involved_in ISO (PMID:26249176) RGD PMID:26249176 NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
JBrowse link
G Ifnb1 interferon beta 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5695780|PMID:26451483)
UniProt
RGD
PMID:26451483 GO_REF:0000024 MGI:5695780 NCBI chr 5:103,020,969...103,021,523
Ensembl chr 5:103,020,969...103,021,523
JBrowse link
G Ifng interferon gamma involved_in ISO
ISS
(PMID:23629966), (PMID:26347139)
GO_REF:0000024
RGD
UniProt
PMID:23629966 PMID:26347139 GO_REF:0000024 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:16888103), (PMID:25891078), (PMID:28389568)
(MGI:3656111|PMID:16888103)
RGD PMID:16888103 PMID:25891078 PMID:28389568 MGI:3656111 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:5319706|PMID:22539723)
(PMID:30704899)
UniProt
RGD
PMID:22539723 PMID:30704899 GO_REF:0000024 MGI:5319706 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO
IBA
(PMID:22012985)
(MGI:4454597|PMID:20457918)
PMID:21873635
RGD PMID:20457918 PMID:22012985 PMID:21873635 MGI:4454597, RGD:13792537 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IDA RGD PMID:26581593 RGD:12879823 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Mefv MEFV innate immuity regulator, pyrin involved_in ISS
ISO
GO_REF:0000024
(PMID:26347139)
UniProt
RGD
PMID:26347139 GO_REF:0000024 NCBI chr10:11,786,948...11,796,977
Ensembl chr10:11,787,422...11,796,973
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:26347139) RGD PMID:26347139 NCBI chr  X:104,354,692...104,456,757
Ensembl chr  X:104,355,316...104,453,473
JBrowse link
G Mir222 microRNA 222 IMP RGD PMID:33792838 RGD:152025536 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006
JBrowse link
G Mtdh metadherin involved_in ISO (PMID:21127263) RGD PMID:21127263 NCBI chr 7:65,306,464...65,365,647
Ensembl chr 7:65,306,400...65,364,413
JBrowse link
G Nprl2 NPR2-like, GATOR1 complex subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:108,215,823...108,218,996
Ensembl chr 8:108,215,814...108,218,996
JBrowse link
G Nprl3 NPR3-like, GATOR1 complex subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:15,355,361...15,395,812
Ensembl chr10:15,355,355...15,395,810
JBrowse link
G Optn optineurin involved_in ISO (PMID:21617041) RGD PMID:21617041 NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:28747345)
MGI:6369059 (MGI:6099440|PMID:28747345)
Ensembl
RGD
PMID:28747345 GO_REF:0000107 MGI:6099440 NCBI chr10:83,590,052...83,598,620
Ensembl chr10:83,590,071...83,598,620
JBrowse link
G Pik3c2a phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha involved_in ISO (PMID:28910396) RGD PMID:28910396 NCBI chr 1:170,577,942...170,684,353
Ensembl chr 1:170,577,942...170,683,472
JBrowse link
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase involved_in ISO (MGI:4361989|PMID:17476689) RGD PMID:17476689 MGI:4361989 NCBI chr  X:14,617,582...14,622,851
Ensembl chr  X:14,617,582...14,622,851
JBrowse link
G Plekhf1 pleckstrin homology and FYVE domain containing 1 involved_in ISO
IBA
(PMID:22115783)
PMID:21873635
RGD PMID:22115783 PMID:21873635 RGD:13792537 NCBI chr 1:90,908,304...90,915,862
Ensembl chr 1:90,904,742...90,915,820
JBrowse link
G Plk2 polo-like kinase 2 involved_in ISO (PMID:23983262) RGD PMID:23983262 NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO
ISS
(PMID:22012985), (PMID:26103054)
(MGI:5285135|PMID:21258367)
GO_REF:0000024
RGD
UniProt
PMID:21258367 PMID:22012985 PMID:26103054 GO_REF:0000024 MGI:5285135 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5285135|PMID:21258367)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21258367 GO_REF:0000024 GO_REF:0000107 MGI:5285135 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkd1 protein kinase D1 involved_in ISO (PMID:22095288) RGD PMID:22095288 NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
JBrowse link
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in ISO (MGI:6810791|PMID:19225151) RGD PMID:19225151 MGI:6810791 NCBI chr 5:13,161,648...13,225,560
Ensembl chr 5:13,161,648...13,225,560
JBrowse link
G Rnf152 ring finger protein 152 involved_in ISO
IBA
ISS
(PMID:25936802)
PMID:21873635
(MGI:5644195|PMID:25936802)
GO_REF:0000024
RGD
UniProt
PMID:25936802 PMID:21873635 GO_REF:0000024 MGI:5644195, RGD:13792537 NCBI chr13:21,324,039...21,403,405
Ensembl chr13:21,323,824...21,403,113
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in ISO
IEA
UniProtKB:Q14457 (PMID:27853422)
GO_REF:0000107
RGD
Ensembl
PMID:27853422 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G Sh3bp4 SH3-domain binding protein 4 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22575674)
UniProt
Ensembl
RGD
PMID:22575674 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:89,660,156...89,739,163
Ensembl chr 9:89,660,156...89,739,163
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 involved_in ISO (PMID:17891140)
(MGI:3770552|PMID:17891140)
RGD PMID:17891140 MGI:3770552 NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
JBrowse link
G Smo smoothened, frizzled class receptor IDA RGD PMID:31221056 RGD:150521664 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (PMID:23878245) RGD PMID:23878245 NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
JBrowse link
G Svip small VCP interacting protein involved_in ISO
IBA
(PMID:21909394)
PMID:21873635
RGD PMID:21909394 PMID:21873635 RGD:13792537 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116
JBrowse link
G Tfeb transcription factor EB involved_in ISO (PMID:21617040), (PMID:22576015), (PMID:23434374) RGD PMID:21617040 PMID:22576015 PMID:23434374 NCBI chr 9:13,198,890...13,254,726
Ensembl chr 9:13,198,891...13,254,714
JBrowse link
G Ticam1 TIR domain containing adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) RGD PMID:17658277 MGI:3718934 NCBI chr 9:1,102,559...1,115,573
Ensembl chr 9:1,102,366...1,123,147
JBrowse link
G Tlr9 toll-like receptor 9 IDA RGD PMID:18632594 RGD:2301341 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
JBrowse link
G Tmem59 transmembrane protein 59 involved_in ISO
IBA
(PMID:23376921)
PMID:21873635
RGD PMID:23376921 PMID:21873635 RGD:13792537 NCBI chr 5:121,962,507...121,983,625
Ensembl chr 5:121,962,440...121,983,625
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 involved_in ISO
ISS
(PMID:22421968), (PMID:22470510)
GO_REF:0000024
RGD
UniProt
PMID:22421968 PMID:22470510 GO_REF:0000024 NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
JBrowse link
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:143,881,427...143,890,104
Ensembl chr 3:143,882,021...143,890,097
JBrowse link
G Tpcn1 two pore segment channel 1 involved_in ISO
IEA
(PMID:22012985)
GO_REF:0000107
RGD
Ensembl
PMID:22012985 GO_REF:0000107 NCBI chr12:35,972,813...36,029,632
Ensembl chr12:35,972,846...36,029,626
JBrowse link
G Trim14 tripartite motif-containing 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:60,800,032...60,825,481
Ensembl chr 5:60,800,032...60,824,858
JBrowse link
G Trim21 tripartite motif-containing 21 involved_in IBA
ISO
PMID:21873635
(PMID:26347139)
RGD PMID:26347139 PMID:21873635 RGD:13792537 NCBI chr 1:156,964,896...156,987,504
Ensembl chr 1:156,964,913...156,987,440
JBrowse link
G Trim27 tripartite motif-containing 27 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:43,538,282...43,550,633
Ensembl chr17:43,538,285...43,550,643
JBrowse link
G Trim30c tripartite motif-containing 30C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,766,401...158,787,915
Ensembl chr 1:158,765,969...158,787,183
JBrowse link
G Trim30d tripartite motif-containing 30D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,795,288...158,813,913
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim32 tripartite motif-containing 32 involved_in ISO (PMID:31123703) RGD PMID:31123703 NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
JBrowse link
G Trim34 tripartite motif-containing 34 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,707,172...158,720,214
Ensembl chr 1:158,707,172...158,718,674
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Trim6 tripartite motif containing 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,683,746...158,696,936
Ensembl chr 1:158,683,746...158,696,914
JBrowse link
G Trim65 tripartite motif-containing 65 involved_in ISO
IBA
(PMID:26347139)
PMID:21873635
RGD PMID:26347139 PMID:21873635 RGD:13792537 NCBI chr10:101,357,937...101,364,036
Ensembl chr10:101,357,937...101,364,971
JBrowse link
G Trim68 tripartite motif containing 68 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:157,114,044...157,127,494
Ensembl chr 1:157,114,044...157,127,477
JBrowse link
G Trim8 tripartite motif-containing 8 involved_in ISO (PMID:26347139) RGD PMID:26347139 NCBI chr 1:245,369,632...245,384,513
Ensembl chr 1:245,369,632...245,384,513
JBrowse link
G Triml1 tripartite motif family-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:48,994,968...49,005,343
Ensembl chr16:48,997,252...49,005,417
JBrowse link
G Triml2 tripartite motif family-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:48,944,838...48,955,453
Ensembl chr16:48,944,838...48,955,453
JBrowse link
G Tsc2 TSC complex subunit 2 involved_in ISO (MGI:5509101|PMID:23878245) RGD PMID:23878245 MGI:5509101 NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
JBrowse link
G Ufl1 Ufm1-specific ligase 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5818653|PMID:25952549)
UniProt
RGD
PMID:25952549 GO_REF:0000024 MGI:5818653 NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO
IBA
(PMID:25126726)
(MGI:5319706|PMID:22539723), (MGI:6810791|PMID:19225151)
PMID:21873635
RGD PMID:19225151 PMID:22539723 PMID:25126726 PMID:21873635 MGI:5319706 MGI:6810791, RGD:13792537 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link
G Ulk2 unc-51 like autophagy activating kinase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (PMID:23184933) RGD PMID:23184933 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:22739135)
(MGI:5487497|PMID:22739135)
RGD PMID:22739135 MGI:5487497 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
positive regulation of autophagy in response to ER overload term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l11 Bcl2-like 11 IMP RGD PMID:25772147 RGD:13782257 NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068
JBrowse link
G Bid BH3 interacting domain death agonist IMP RGD PMID:25772147 RGD:13782257 NCBI chr 4:154,113,198...154,136,353
Ensembl chr 4:154,113,198...154,134,720
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 IMP RGD PMID:25772147 RGD:13782257 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
positive regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 IMP RGD PMID:23698117 RGD:11561968 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Fbxo7 F-box protein 7 involved_in IBA
IMP
ISO
PMID:21873635
PMID:26310625
(PMID:26310625)
RGD PMID:26310625 PMID:21873635 PMID:26310625 RGD:13792537, RGD:11536096 NCBI chr 7:17,809,224...17,837,549
Ensembl chr 7:17,809,231...17,837,530
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in IEA
ISO
GO_REF:0000107
(MGI:3796473|PMID:18281291)
Ensembl
RGD
PMID:18281291 GO_REF:0000107 MGI:3796473 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Htt huntingtin involved_in IEA
ISO
GO_REF:0000107
(PMID:25686248)
Ensembl
RGD
PMID:25686248 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:26310625) RGD PMID:26310625 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
JBrowse link
positive regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo-like kinase 3 involved_in ISO (PMID:27344333) RGD PMID:27344333 NCBI chr 5:130,607,142...130,612,317
Ensembl chr 5:130,607,142...130,612,317
JBrowse link
positive regulation of lipophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:23708524)
GO_Central
RGD
PMID:23708524 GO_REF:0000024 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Htt huntingtin involved_in ISO
IEA
(PMID:25686248)
GO_REF:0000107
RGD
Ensembl
PMID:25686248 GO_REF:0000107 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO MGI:3587950 (MGI:5444071|PMID:22958918) RGD PMID:22958918 MGI:5444071 NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
JBrowse link
G Sptlc1 serine palmitoyltransferase, long chain base subunit 1 acts_upstream_of_or_within ISO (PMID:25332431) RGD PMID:25332431 NCBI chr17:11,877,249...11,916,295
Ensembl chr17:11,877,249...11,916,295
JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25332431)
GO_REF:0000107
RGD
Ensembl
PMID:25332431 GO_REF:0000107 NCBI chr 6:106,948,681...107,031,584
Ensembl chr 6:106,950,949...107,031,542
JBrowse link
positive regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3 BCL2 interacting protein 3 acts_upstream_of_or_within ISO UniProtKB:O60238 (PMID:19273585) RGD PMID:19273585 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Bnip3l BCL2 interacting protein 3 like acts_upstream_of_or_within ISO UniProtKB:Q12983 (PMID:19273585) RGD PMID:19273585 NCBI chr15:41,174,594...41,197,730
Ensembl chr15:41,174,594...41,197,803
JBrowse link
G Dcn decorin acts_upstream_of_or_within ISO UniProtKB:P35968 (PMID:23798385) RGD PMID:23798385 NCBI chr 7:32,281,252...32,321,291
Ensembl chr 7:32,281,252...32,321,270
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO MGI:102548|MGI:2182627 (MGI:4457987|PMID:20453062)
(PMID:20453062)
RGD PMID:20453062 MGI:4457987 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
JBrowse link
G Gnai3 G protein subunit alpha i3 involved_in ISO (PMID:12642577) RGD PMID:12642577 NCBI chr 2:195,742,765...195,780,720
Ensembl chr 2:195,742,642...195,780,742
JBrowse link
G Gpsm1 G-protein signaling modulator 1 involved_in ISO (PMID:12642577) RGD PMID:12642577 NCBI chr 3:9,140,816...9,167,828
Ensembl chr 3:9,128,636...9,167,827
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2386679 (MGI:3847365|PMID:19273585)
Ensembl
RGD
PMID:19273585 GO_REF:0000107 MGI:3847365 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within ISO MGI:2429784 (MGI:5430482|PMID:20705711) RGD PMID:20705711 MGI:5430482 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma involved_in ISO (MGI:5819337|PMID:23778976) RGD PMID:23778976 MGI:5819337 NCBI chr  X:152,216,485...152,241,476
Ensembl chr  X:152,216,596...152,239,499
JBrowse link
G Il4 interleukin 4 involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5702366|PMID:26416964)
GO_REF:0000024
RGD
UniProt
PMID:26416964 PMID:21873635 GO_REF:0000024 MGI:5702366, RGD:13792537 NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
JBrowse link
G Kdr kinase insert domain receptor acts_upstream_of_or_within
involved_in
ISO
IEA
UniProtKB:P07585 (PMID:23798385)
GO_REF:0000107
RGD
Ensembl
PMID:23798385 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Larp1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr10:42,191,378...42,246,361
Ensembl chr10:42,191,325...42,243,371
JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 involved_in ISO (MGI:5819337|PMID:23778976) RGD PMID:23778976 MGI:5819337 NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597
JBrowse link
G Pafah1b2 platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 8:46,260,069...46,312,073
Ensembl chr 8:46,261,064...46,279,833
JBrowse link
G Pim2 Pim-2 proto-oncogene, serine/threonine kinase acts_upstream_of_or_within ISO (MGI:4361989|PMID:17476689) RGD PMID:17476689 MGI:4361989 NCBI chr  X:14,617,582...14,622,851
Ensembl chr  X:14,617,582...14,622,851
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:20871098) RGD PMID:20871098 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Rab12 RAB12, member RAS oncogene family involved_in ISO (MGI:5574288|PMID:23357852) RGD PMID:23357852 MGI:5574288 NCBI chr 9:106,480,301...106,506,895
Ensembl chr 9:106,480,301...106,506,910
JBrowse link
G RGD1359108 similar to RIKEN cDNA 3110043O21 involved_in ISO
IEA
ISS
UniProtKB:Q96DA2 (PMID:27103069), (PMID:27334615)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:27103069 PMID:27334615 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
JBrowse link
G Rufy4 RUN and FYVE domain containing 4 involved_in IBA
ISO
PMID:21873635
(PMID:26416964)
RGD PMID:26416964 PMID:21873635 RGD:13792537 NCBI chr 9:75,702,937...75,727,719
Ensembl chr 9:75,703,750...75,723,525
JBrowse link
G Scoc short coiled-coil protein involved_in ISO
ISS
(PMID:22354037)
GO_REF:0000024
RGD
GO_Central
PMID:22354037 GO_REF:0000024 NCBI chr19:24,659,651...24,689,236
Ensembl chr19:24,659,651...24,693,217
JBrowse link
G Sesn1 sestrin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:45,294,876...45,387,698
Ensembl chr20:45,294,871...45,387,697
JBrowse link
G Sesn2 sestrin 2 involved_in ISO
IBA
(PMID:23274085)
PMID:21873635
RGD PMID:23274085 PMID:21873635 RGD:13792537 NCBI chr 5:144,702,287...144,721,241
Ensembl chr 5:144,701,530...144,721,260
JBrowse link
G Sesn3 sestrin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:11,133,822...11,189,436
Ensembl chr 8:11,133,678...11,185,842
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:18296641)
(MGI:3776699|PMID:18296641), (MGI:4940431|PMID:21189328)
RGD PMID:18296641 PMID:21189328 MGI:3776699 MGI:4940431 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO
IBA
ISS
(PMID:30568238), (PMID:30842662)
PMID:21873635
(MGI:6305034|PMID:30568238)
GO_REF:0000024
RGD
UniProt
PMID:30568238 PMID:30842662 PMID:21873635 GO_REF:0000024 MGI:6305034, RGD:13792537 NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr 1:83,586,713...83,616,971
Ensembl chr 1:83,586,718...83,616,892
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO (PMID:27103069) RGD PMID:27103069 NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO
IBA
(PMID:22178386)
PMID:21873635
RGD PMID:22178386 PMID:21873635 RGD:13792537 NCBI chr15:35,733,548...35,772,676
Ensembl chr15:35,734,107...35,772,677
JBrowse link
G Tsc1 TSC complex subunit 1 IDA RGD PMID:23435171 RGD:10448950 NCBI chr 3:11,969,547...12,018,591
Ensembl chr 3:11,979,729...12,015,674
JBrowse link
G Tsc2 TSC complex subunit 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:4457987|PMID:20453062)
(MGI:5819337|PMID:23778976)
UniProtKB:Q61037 (PMID:23778976)
Ensembl
RGD
PMID:20453062 PMID:23778976 GO_REF:0000107 MGI:4457987 MGI:5819337 NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301
JBrowse link
G Wdr24 WD repeat domain 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:14,844,089...14,848,871
Ensembl chr10:14,843,728...14,848,864
JBrowse link
positive regulation of mitophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ambra1 autophagy and beclin 1 regulator 1 involved_in ISO (PMID:30217973) RGD PMID:30217973 NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
JBrowse link
G Cers1 ceramide synthase 1 involved_in ISO (PMID:22922758) RGD PMID:22922758 NCBI chr16:19,097,309...19,112,519
Ensembl chr16:19,104,466...19,112,519
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IMP RGD PMID:28608965 RGD:13432560 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
JBrowse link
G Slc25a4 solute carrier family 25 member 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6407583|PMID:31618756)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:31618756 GO_REF:0000024 GO_REF:0000107 MGI:6407583 NCBI chr16:46,072,935...46,076,730
Ensembl chr16:46,072,939...46,076,733
JBrowse link
G Slc25a5 solute carrier family 25 member 5 involved_in ISS
ISO
GO_REF:0000024
(MGI:6407583|PMID:31618756)
UniProt
RGD
PMID:31618756 GO_REF:0000024 MGI:6407583 NCBI chr  X:116,031,896...116,034,963
Ensembl chr  X:116,031,803...116,034,967
JBrowse link
G Vdac1 voltage-dependent anion channel 1 involved_in ISO (PMID:32047033) RGD PMID:32047033 NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
JBrowse link
G Vps13d vacuolar protein sorting 13 homolog D involved_in ISO (PMID:29307555) RGD PMID:29307555 NCBI chr 5:156,830,509...157,055,895
Ensembl chr 5:156,830,512...157,055,891
JBrowse link
positive regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vdac1 voltage-dependent anion channel 1 involved_in ISO (PMID:32047033) RGD PMID:32047033 NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
JBrowse link
positive regulation of xenophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in ISO (PMID:23245322) RGD PMID:23245322 NCBI chr 3:16,223,367...16,264,261
Ensembl chr 3:16,223,367...16,264,154
JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (MGI:5299952|PMID:22033934) RGD PMID:22033934 MGI:5299952 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863
JBrowse link
G Nod1 nucleotide-binding oligomerization domain containing 1 acts_upstream_of_or_within ISO MGI:2674231 (MGI:5299952|PMID:22033934) RGD PMID:22033934 MGI:5299952 NCBI chr 4:84,060,871...84,111,668
Ensembl chr 4:84,060,880...84,111,404
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within ISO MGI:3529594 (MGI:5299952|PMID:22033934) RGD PMID:22033934 MGI:5299952 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Optn optineurin involved_in ISO
IEA
(PMID:21617041)
GO_REF:0000107
RGD
Ensembl
PMID:21617041 GO_REF:0000107 NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (MGI:5299952|PMID:22033934) RGD PMID:22033934 MGI:5299952 NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Rnf31 ring finger protein 31 involved_in ISO (PMID:28481331) RGD PMID:28481331 NCBI chr15:29,083,047...29,095,328
Ensembl chr15:29,083,631...29,101,915
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO (MGI:5645201|PMID:21617041) RGD PMID:21617041 MGI:5645201 NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO MGI:2674036 (MGI:5299952|PMID:22033934) RGD PMID:22033934 MGI:5299952 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 involved_in ISO (PMID:22342342) RGD PMID:22342342 NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418
JBrowse link
G Atg5 autophagy related 5 involved_in ISO
IEA
(PMID:22342342)
GO_REF:0000107
RGD
Ensembl
PMID:22342342 GO_REF:0000107 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209
JBrowse link
G Clec16a C-type lectin domain containing 16A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:5698740|PMID:26450516) RGD PMID:26450516 MGI:5698740 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Tbc1d25 TBC1 domain family, member 25 involved_in ISO
IBA
(PMID:21383079)
PMID:21873635
RGD PMID:21383079 PMID:21873635 RGD:13792537 NCBI chr  X:14,314,095...14,339,171
Ensembl chr  X:14,314,414...14,338,275
JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 involved_in ISO (PMID:22342342) RGD PMID:22342342 NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611
JBrowse link
regulation of autophagy of mitochondrion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bnip3l BCL2 interacting protein 3 like involved_in ISO UniProtKB:Q9Z2F7 (MGI:5616312|PMID:20200478) RGD PMID:20200478 MGI:5616312 NCBI chr15:41,174,594...41,197,730
Ensembl chr15:41,174,594...41,197,803
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080
JBrowse link
G Cttn cortactin involved_in ISO
IEA
(MGI:5616310|PMID:20457763)
GO_REF:0000107
RGD
Ensembl
PMID:20457763 GO_REF:0000107 MGI:5616310 NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
JBrowse link
G Dnm1l dynamin 1-like involved_in ISO UniProtKB:Q9BXM7 (PMID:19279012) RGD PMID:19279012 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:24912190) RGD PMID:24912190 NCBI chr 2:170,150,552...170,310,698
Ensembl chr 2:170,149,694...170,309,941
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 involved_in ISO
IEA
(PMID:28381481), (PMID:31908024)
GO_REF:0000107
RGD
Ensembl
PMID:28381481 PMID:31908024 GO_REF:0000107 NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:24912190) RGD PMID:24912190 NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
JBrowse link
G Parl presenilin associated, rhomboid-like involved_in ISO (MGI:5619462|PMID:21355049) RGD PMID:21355049 MGI:5619462 NCBI chr11:80,594,059...80,620,506
Ensembl chr11:80,593,192...80,620,506
JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO (PMID:24912190) RGD PMID:24912190 NCBI chr10:45,007,637...45,029,650
Ensembl chr10:45,007,637...45,029,650
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr 7:113,663,202...113,720,850
Ensembl chr 7:113,663,202...113,720,848
JBrowse link
G Usp36 ubiquitin specific peptidase 36 involved_in ISO (PMID:24912190) ParkinsonsUK-UCL PMID:24912190 NCBI chr10:103,497,349...103,528,877
Ensembl chr10:103,497,349...103,528,877
JBrowse link
G Vdac1 voltage-dependent anion channel 1 involved_in ISO (MGI:5689082|PMID:25470454) RGD PMID:25470454 MGI:5689082 NCBI chr10:36,532,306...36,559,642
Ensembl chr10:36,532,244...36,559,640
JBrowse link
regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfap glial fibrillary acidic protein involved_in ISO
IBA
IMP
(PMID:20797626)
PMID:21873635
(MGI:4830420|PMID:20797626)
RGD PMID:20797626 PMID:21873635 PMID:20797626 MGI:4830420, RGD:13792537, RGD:10412296 NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
JBrowse link
regulation of macroautophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg14 autophagy related 14 involved_in ISO (PMID:10625637) RGD PMID:10625637 NCBI chr15:20,795,750...20,827,113
Ensembl chr15:20,795,750...20,827,113
JBrowse link
G Atp13a2 ATPase cation transporting 13A2 involved_in ISO (PMID:22198378) RGD PMID:22198378 NCBI chr 5:153,292,722...153,312,143
Ensembl chr 5:153,292,751...153,312,139
JBrowse link
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 involved_in ISO
IEA
(PMID:22982048)
GO_REF:0000107
RGD
Ensembl
PMID:22982048 GO_REF:0000107 NCBI chr10:85,935,802...85,989,901
Ensembl chr10:85,935,854...85,989,895
JBrowse link
G Becn1 beclin 1 involved_in ISO (PMID:10625637) RGD PMID:10625637 NCBI chr10:86,231,387...86,246,742
Ensembl chr10:86,231,388...86,246,742
JBrowse link
G Hdac6 histone deacetylase 6 involved_in ISO (PMID:16192271) RGD PMID:16192271 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase, catalytic subunit type 3 involved_in ISO (PMID:10625637) RGD PMID:10625637 NCBI chr18:21,845,282...21,934,387
Ensembl chr18:21,845,295...21,929,048
JBrowse link
G Pik3r4 phosphoinositide-3-kinase, regulatory subunit 4 involved_in ISO (PMID:10625637) RGD PMID:10625637 NCBI chr 8:106,267,908...106,316,585
Ensembl chr 8:106,267,954...106,316,584
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5619439|PMID:23332761)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23332761 GO_REF:0000024 GO_REF:0000107 MGI:5619439 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Ubqln1 ubiquilin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Ubqln2 ubiquilin 2 involved_in IBA
ISO
PMID:21873635
(PMID:20529957)
RGD PMID:20529957 PMID:21873635 RGD:13792537 NCBI chr  X:17,853,086...17,856,505
Ensembl chr  X:17,853,114...17,856,505
JBrowse link
G Ulk1 unc-51 like autophagy activating kinase 1 involved_in ISO (PMID:20921139) RGD PMID:20921139 NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20091
    cellular process 18676
      process utilizing autophagic mechanism 508
        autophagy 508
          regulation of autophagy 294
            modulation by virus of host autophagy + 0
            negative regulation of autophagy + 79
            positive regulation of autophagy + 153
            regulation of autophagy of mitochondrion + 31
            regulation of chaperone-mediated autophagy + 4
            regulation of macroautophagy + 118
            regulation of microlipophagy 0
Path 2
Term Annotations click to browse term
  biological_process 20091
    biological regulation 13996
      regulation of biological process 13218
        regulation of cellular process 12482
          regulation of cellular metabolic process 5719
            regulation of cellular catabolic process 780
              regulation of autophagy 294
                modulation by virus of host autophagy + 0
                negative regulation of autophagy + 79
                positive regulation of autophagy + 153
                regulation of autophagy of mitochondrion + 31
                regulation of chaperone-mediated autophagy + 4
                regulation of macroautophagy + 118
                regulation of microlipophagy 0
paths to the root