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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of gastrulation
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Accession:GO:0010470 term browser browse the term
Definition:Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals.


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regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955459:8,382,671...8,628,048
Ensembl chrNW_004955459:8,408,160...8,629,344
JBrowse link
G Clasp2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955421:767,648...957,160
Ensembl chrNW_004955421:767,210...897,457
JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (MGI:5700252|PMID:26496195) UniProt PMID:26496195 MGI:5700252 NCBI chrNW_004955419:4,604,883...4,626,675
Ensembl chrNW_004955419:4,607,507...4,626,608
JBrowse link
G Dag1 dystroglycan 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955532:1,446,553...1,465,310
Ensembl chrNW_004955532:1,397,900...1,466,312
JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha acts_upstream_of_or_within ISO (MGI:69170|PMID:7958910) MGI PMID:7958910 MGI:69170 NCBI chrNW_004955445:12,925,248...12,962,501
Ensembl chrNW_004955445:12,924,662...12,984,281
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628
JBrowse link
G Phldb1 pleckstrin homology like domain family B member 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955412:19,754,997...19,800,984
Ensembl chrNW_004955412:19,756,379...19,800,984
JBrowse link
G Phldb2 pleckstrin homology like domain family B member 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chrNW_004955427:12,284,100...12,385,755
Ensembl chrNW_004955427:12,273,062...12,388,217
JBrowse link
G Poglut1 protein O-glucosyltransferase 1 involved_in ISO (MGI:5700252|PMID:26496195) UniProt PMID:26496195 MGI:5700252 NCBI chrNW_004955427:19,188,512...19,206,050
Ensembl chrNW_004955427:19,188,183...19,206,050
JBrowse link
G Tgif1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chrNW_004955402:7,130,809...7,138,945
Ensembl chrNW_004955402:7,129,484...7,138,340
JBrowse link
G Tgif2 TGFB induced factor homeobox 2 acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chrNW_004955422:25,024,359...25,042,568
Ensembl chrNW_004955422:25,024,359...25,041,459
JBrowse link
positive regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxa2 forkhead box A2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255
JBrowse link
G Lhx1 LIM homeobox 1 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (PMID:21281489) UniProt PMID:21281489 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO (MGI:5009762|PMID:21281489) UniProt PMID:21281489 MGI:5009762 NCBI chrNW_004955417:14,502,450...14,510,015
Ensembl chrNW_004955417:14,502,451...14,510,160
JBrowse link
G Otx2 orthodenticle homeobox 2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095
JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:1343990|PMID:10477299) UniProt PMID:10477299 MGI:1343990 NCBI chrNW_004955454:2,886,981...2,888,829
Ensembl chrNW_004955454:2,886,981...2,888,829
JBrowse link
G Tenm4 teneurin transmembrane protein 4 involved_in ISO (MGI:3531238|PMID:15489520) UniProt PMID:15489520 MGI:3531238 NCBI chrNW_004955414:12,649,128...13,364,523
Ensembl chrNW_004955414:12,867,974...13,364,580
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11976
    developmental process 5678
      anatomical structure morphogenesis 2525
        regulation of anatomical structure morphogenesis 895
          regulation of gastrulation 18
            negative regulation of gastrulation 0
            positive regulation of gastrulation 7
            regulation of apical constriction involved in ventral furrow formation + 0
Path 2
Term Annotations click to browse term
  biological_process 11976
    developmental process 5678
      anatomical structure development 5308
        multicellular organism development 4864
          embryo development 1179
            embryonic morphogenesis 630
              gastrulation 177
                regulation of gastrulation 18
                  negative regulation of gastrulation 0
                  positive regulation of gastrulation 7
                  regulation of apical constriction involved in ventral furrow formation + 0
paths to the root