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ONTOLOGY REPORT - ANNOTATIONS

Term:fatty acid omega-oxidation
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Accession:GO:0010430 term browser browse the term
Definition:A fatty acid oxidation process in which the methyl group at the end of the fatty acid molecule (the omega carbon) is first oxidized to a hydroxyl group, then to an oxo group, and finally to a carboxyl group. The long chain dicarboxylates derived from omega-oxidation then enter the beta-oxidation pathway for further degradation.
Synonyms:xref: MetaCyc:PWY-2724


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fatty acid omega-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in ISS
ISO		 GO_REF:0000024
(PMID:16081420)
(MGI:6355486|PMID:16081420)		 UniProt
RGD		 PMID:16081420 GO_REF:0000024 MGI:6355486 NCBI chr 2:226,948,717...226,966,747
Ensembl chr 2:226,947,466...226,987,591 		JBrowse link
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide involved_in ISO
ISS		 (PMID:16081420)
GO_REF:0000024		 RGD
UniProt		 PMID:16081420 GO_REF:0000024 NCBI chr 2:226,975,184...226,987,591
Ensembl chr 2:226,947,466...226,987,591 		JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in ISO (PMID:9600267) RGD PMID:9600267 NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182 		JBrowse link
G Cyp4f18 cytochrome P450, family 4, subfamily f, polypeptide 18 involved_in ISO (PMID:18577768) RGD PMID:18577768 NCBI chr16:17,763,543...17,804,944
Ensembl chr16:17,707,317...17,804,940 		JBrowse link
G Cyp4v3 cytochrome P450, family 4, subfamily v, polypeptide 3 involved_in ISO
ISS		 (PMID:19661213), (PMID:22772592)
GO_REF:0000024		 RGD
UniProt		 PMID:19661213 PMID:22772592 GO_REF:0000024 NCBI chr16:46,917,929...46,958,735
Ensembl chr16:46,918,401...46,943,395 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12289
      cellular metabolic process 10293
        cellular lipid metabolic process 1068
          fatty acid metabolic process 454
            fatty acid oxidation 120
              fatty acid omega-oxidation 5
Path 2
Term Annotations click to browse term
  biological_process 20115
    cellular process 18524
      cellular metabolic process 10293
        organic acid metabolic process 1033
          oxoacid metabolic process 1022
            carboxylic acid metabolic process 1007
              monocarboxylic acid metabolic process 730
                fatty acid metabolic process 454
                  fatty acid oxidation 120
                    fatty acid omega-oxidation 5
paths to the root