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ONTOLOGY REPORT - ANNOTATIONS


Term:response to gamma radiation
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Accession:GO:0010332 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum.
Synonyms:related_synonym: response to gamma ray;   response to gamma-ray photon


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response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO MGI:2157186 (MGI:3057047|PMID:15480992) RGD PMID:15480992 MGI:3057047 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390
JBrowse link
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO MGI:2159364 (MGI:3722566|PMID:17068116) RGD PMID:17068116 MGI:3722566 NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
JBrowse link
G Bax BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857429 (MGI:3722566|PMID:17068116)
Ensembl
RGD
PMID:17068116 GO_REF:0000107 MGI:3722566 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2156165 (MGI:1858868|PMID:10815637), (MGI:2156164|PMID:8170972), (MGI:3722566|PMID:17068116), (MGI:62849|PMID:8372353)
Ensembl
RGD
PMID:8170972 PMID:8372353 PMID:10815637 PMID:17068116 GO_REF:0000107 MGI:1858868 MGI:2156164 MGI:3722566 MGI:62849 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177233|MGI:2653913|MGI:2653914 (MGI:1277623|PMID:9699678), (MGI:87113|PMID:9126738)
Ensembl
RGD
PMID:9126738 PMID:9699678 GO_REF:0000107 MGI:1277623 MGI:87113 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567
JBrowse link
G Casp6 caspase 6 IEP RGD PMID:10590178 RGD:2301333 NCBI chr 2:218,466,063...218,478,503
Ensembl chr 2:218,466,076...218,478,502
JBrowse link
G Cav1 caveolin 1 IEP RGD PMID:17993744 RGD:2289115 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:16301331 RGD:1579837 NCBI chr 8:44,487,824...44,571,620
Ensembl chr 8:44,489,410...44,571,176
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP RGD PMID:19084914 RGD:2306303 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccl7 C-C motif chemokine ligand 7 IEP RGD PMID:20185578 RGD:5134998 NCBI chr10:67,016,446...67,018,296
Ensembl chr10:67,016,446...67,018,303
JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO (MGI:3032464|PMID:14744935) RGD PMID:14744935 MGI:3032464 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:17,193,364...17,195,143
Ensembl chr14:17,193,365...17,195,215
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 IEP RGD PMID:19084914 RGD:2306303 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:17,181,030...17,183,075
Ensembl chr14:17,181,062...17,183,075
JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:17,310,089...17,312,303
Ensembl chr14:17,310,426...17,313,093
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP 137 cesium RGD PMID:18046538 RGD:4831839 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Dcun1d3 defective in cullin neddylation 1 domain containing 3 involved_in ISO
ISS
(PMID:18823379)
GO_REF:0000024
RGD
UniProt
PMID:18823379 GO_REF:0000024 NCBI chr 1:174,243,001...174,285,647
Ensembl chr 1:66,494,848...66,496,343
Ensembl chr 1:66,494,848...66,496,343
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:19169047 RGD:9685443 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (MGI:3054497|PMID:15340056) RGD PMID:15340056 MGI:3054497 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587
JBrowse link
G Fancd2 FA complementation group D2 involved_in ISO (PMID:12874027) RGD PMID:12874027 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412
JBrowse link
G Gata3 GATA binding protein 3 IEP RGD PMID:19084914 RGD:2306303 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104887|MGI:98352 (MGI:3044494|PMID:15182862)
Ensembl
RGD
PMID:15182862 GO_REF:0000107 MGI:3044494 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Il1a interleukin 1 alpha IEP RGD PMID:16524844 RGD:2311096 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822
JBrowse link
G Il1b interleukin 1 beta IEP RGD PMID:16524844 RGD:2311096 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Il6r interleukin 6 receptor IEP RGD PMID:14751512 RGD:1625440 NCBI chr 2:175,289,157...175,347,719
Ensembl chr 2:175,298,686...175,347,536
JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (MGI:1312981|PMID:9823897), (MGI:1860400|PMID:10911993) RGD PMID:9823897 PMID:10911993 MGI:1312981 MGI:1860400 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
JBrowse link
G Men1 menin 1 involved_in ISO (PMID:12874027) RGD PMID:12874027 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISS
ISO
GO_REF:0000024
(PMID:19179467)
UniProt
RGD
PMID:19179467 GO_REF:0000024 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IEP RGD PMID:14994994 RGD:10414067 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within ISO MGI:104662|MGI:2429949 (MGI:1306978|PMID:9806545), (MGI:3701394|PMID:11025664) RGD PMID:9806545 PMID:11025664 MGI:1306978 MGI:3701394 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Polb DNA polymerase beta IEP RGD PMID:12425958 RGD:8694104 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812
JBrowse link
G Polg DNA polymerase gamma, catalytic subunit IEP RGD PMID:12425958 RGD:8694104 NCBI chr 1:133,382,764...133,399,578
Ensembl chr 1:133,382,766...133,398,567
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4822286|PMID:20647423)
UniProt
RGD
PMID:20647423 GO_REF:0000024 MGI:4822286 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:2383951 (MGI:1290043|PMID:9768755) RGD PMID:9768755 MGI:1290043 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C IDA RGD PMID:17290791 RGD:1599984 NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEP RGD PMID:14751512 PMID:16937495 RGD:1625440, RGD:2298916 NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787
JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO MGI:104887|MGI:98352 (MGI:3044494|PMID:15182862) RGD PMID:15182862 MGI:3044494 NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:4391656 (MGI:5498602|PMID:23726973) RGD PMID:23726973 MGI:5498602 NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
JBrowse link
G Top1 DNA topoisomerase I IEP RGD PMID:2853856 RGD:2317066 NCBI chr 3:149,293,658...149,375,405
Ensembl chr 3:149,293,403...149,376,623
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:7958916)
MGI:1857590 (MGI:3032464|PMID:14744935), (MGI:3722566|PMID:17068116)
RGD PMID:7958916 PMID:14744935 PMID:17068116 MGI:3032464 MGI:3722566 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO (PMID:21333377) RGD PMID:21333377 NCBI chr15:35,733,548...35,772,676
Ensembl chr15:35,734,107...35,772,677
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO MGI:3654106 (MGI:3652689|PMID:16777961) RGD PMID:16777961 MGI:3652689 NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771 (MGI:1913213|PMID:9875844) RGD PMID:9875844 MGI:1913213 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
JBrowse link
cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:16213212), (PMID:9925639) RGD PMID:9925639 PMID:16213212 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:9925639) RGD PMID:9925639 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
JBrowse link
G Bcl2l1 Bcl2-like 1 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (MGI:1354114|PMID:10710310) RGD PMID:10710310 MGI:1354114 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO MGI:2386905 (MGI:1354114|PMID:10710310) RGD PMID:10710310 MGI:1354114 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286
JBrowse link
G Cryab crystallin, alpha B acts_upstream_of_or_within ISO (PMID:23542032) RGD PMID:23542032 NCBI chr 8:51,093,441...51,099,161
Ensembl chr 8:51,093,441...51,099,157
JBrowse link
G Cyba cytochrome b-245 alpha chain IEP RGD PMID:18640264 RGD:2317861 NCBI chr19:50,487,598...50,495,669
Ensembl chr19:50,487,597...50,495,721
JBrowse link
G Ddias DNA damage-induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) RGD PMID:17515607 MGI:3718924 NCBI chr 1:146,906,150...146,930,462
Ensembl chr 1:146,906,154...146,930,462
JBrowse link
G Egr1 early growth response 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:3830454|PMID:19057511)
Ensembl
RGD
PMID:19057511 GO_REF:0000107 MGI:3830454 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Elk1 ETS transcription factor ELK1 IDA RGD PMID:17949253 RGD:7488908 NCBI chr  X:1,138,826...1,155,713
Ensembl chr  X:1,139,756...1,155,713
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 acts_upstream_of_or_within ISO MGI:5514340 (MGI:5506835|PMID:23637614) RGD PMID:23637614 MGI:5506835 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939
JBrowse link
G H2ax H2A.X variant histone IDA RGD PMID:17552875 RGD:8693710 NCBI chr 8:44,671,927...44,673,257
Ensembl chr 8:44,671,786...44,673,239
JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:26359349) RGD PMID:26359349 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP RGD PMID:20470193 RGD:11354917 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) RGD PMID:24217620 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:11836244) RGD PMID:11836244 NCBI chr 3:57,128,561...57,289,943
Ensembl chr 3:57,130,551...57,289,626
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
G Nox4 NADPH oxidase 4 IEP RGD PMID:18640264 RGD:2317861 NCBI chr 1:140,900,886...141,078,844
Ensembl chr 1:140,901,097...141,077,406
JBrowse link
G Rad51 RAD51 recombinase IEP RGD PMID:9885240 RGD:9831175 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Rnf4 ring finger protein 4 IMP RGD PMID:22661230 RGD:9480235 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566
JBrowse link
G Rpl13a ribosomal protein L13A IEP RGD PMID:10483362 RGD:11036101 NCBI chr 1:95,609,374...95,612,557 JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
JBrowse link
G Tlk2 tousled-like kinase 2 involved_in ISO (PMID:12660173) RGD PMID:12660173 NCBI chr10:90,154,449...90,248,562
Ensembl chr10:90,156,813...90,248,561
JBrowse link
G Tmem109 transmembrane protein 109 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:23542032)
RGD PMID:23542032 PMID:21873635 RGD:13792537 NCBI chr 1:207,519,628...207,530,245
Ensembl chr 1:207,519,624...207,530,215
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:16213212)
(MGI:1354114|PMID:10710310)
RGD PMID:10710310 PMID:16213212 MGI:1354114 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:3818783|PMID:18045533) RGD PMID:18045533 MGI:3818783 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
G Tspyl5 TSPY-like 5 involved_in ISO (PMID:20079711) RGD PMID:20079711 NCBI chr 7:64,881,092...64,885,538
Ensembl chr 7:64,884,225...64,885,457
JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:21639834) RGD PMID:21639834 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IBA
ISO
PMID:21873635
(PMID:26359349)
RGD PMID:26359349 PMID:21873635 RGD:13792537 NCBI chr 9:73,955,220...74,044,020
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in IBA
ISO
PMID:21873635
(PMID:26359349)
RGD PMID:26359349 PMID:21873635 RGD:13792537 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO
ISS
(PMID:18280240)
GO_REF:0000024
RGD
UniProt
PMID:18280240 GO_REF:0000024 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (MGI:3583382|PMID:15980864) RGD PMID:15980864 MGI:3583382 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
negative regulation of response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkdc protein kinase, DNA-activated, catalytic subunit IMP RGD PMID:22981234 RGD:8696027 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
regulation of cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase IMP RGD PMID:28007901 RGD:12879399 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    response to stimulus 10358
      response to abiotic stimulus 1530
        response to radiation 542
          response to ionizing radiation 192
            response to gamma radiation 74
              cellular response to gamma radiation + 33
              negative regulation of response to gamma radiation + 1
              positive regulation of response to gamma radiation + 0
              regulation of response to gamma radiation + 2
paths to the root