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ONTOLOGY REPORT - ANNOTATIONS


Term:response to ionizing radiation
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Accession:GO:0010212 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.
Synonyms:exact_synonym: response to ionising radiation;   response to ionizing radiation stimulus


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response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcg5 ATP binding cassette subfamily G member 5 ISO RGD PMID:17132608 RGD:1598660 NCBI chrNW_004955441:10,964,588...10,987,771
Ensembl chrNW_004955441:10,964,858...10,986,967
JBrowse link
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chrNW_004955474:6,252,321...6,265,518
Ensembl chrNW_004955474:6,252,321...6,265,286
JBrowse link
G Aen apoptosis enhancing nuclease involved_in ISO (PMID:16171785) UniProt PMID:16171785 NCBI chrNW_004955416:16,328,655...16,338,069
Ensembl chrNW_004955416:16,331,290...16,338,078
JBrowse link
G Alad aminolevulinate dehydratase ISO 131Iodine RGD PMID:17916974 RGD:4144160 NCBI chrNW_004955419:14,093,010...14,104,376
Ensembl chrNW_004955419:14,093,010...14,104,545
JBrowse link
G Atm ATM serine/threonine kinase involved_in
acts_upstream_of_or_within
ISO (PMID:11375976), (PMID:9733515)
(MGI:3836659|PMID:19061978)
(MGI:1352316|PMID:10639175)
BHF-UCL
MGI
PMID:9733515 PMID:10639175 PMID:11375976 PMID:19061978 MGI:1352316 MGI:3836659 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISO (PMID:19261748), (PMID:19261749) UniProt PMID:19261748 PMID:19261749 NCBI chrNW_004955524:939,250...944,457
Ensembl chrNW_004955524:937,815...944,456
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO (PMID:19261748), (PMID:19261749) UniProt PMID:19261748 PMID:19261749 NCBI chrNW_004955469:9,831,488...10,246,631
Ensembl chrNW_004955469:9,831,488...10,246,899
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:3512739|PMID:15578100)
(MGI:1352316|PMID:10639175)
MGI PMID:10639175 PMID:15578100 MGI:1352316 MGI:3512739 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Brat1 BRCA1 associated ATM activator 1 involved_in ISO (PMID:16452482) UniProt PMID:16452482 NCBI chrNW_004955460:12,662,005...12,674,223
Ensembl chrNW_004955460:12,662,779...12,673,287
JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO (PMID:17525341), (PMID:19261746), (PMID:19261748) UniProt PMID:17525341 PMID:19261746 PMID:19261748 NCBI chrNW_004955594:551,407...613,772
Ensembl chrNW_004955594:554,081...613,661
JBrowse link
G Brsk1 BR serine/threonine kinase 1 NOT|involved_in ISO (PMID:15150265) UniProt PMID:15150265 NCBI chrNW_004955567:924,728...943,092
Ensembl chrNW_004955567:924,734...943,701
JBrowse link
G Clk2 CDC like kinase 2 involved_in ISO (PMID:20682768) UniProt PMID:20682768 NCBI chrNW_004955545:1,716,294...1,727,187
Ensembl chrNW_004955545:1,716,294...1,725,185
JBrowse link
G Cop1 COP1 E3 ubiquitin ligase involved_in ISO (PMID:19805145) UniProt PMID:19805145 NCBI chrNW_004955406:15,662,546...15,859,306
Ensembl chrNW_004955406:15,662,546...15,859,306
JBrowse link
G CUNH10orf90 chromosome unknown C10orf90 homolog involved_in ISO (MGI:4455105|PMID:20154723) UniProt PMID:20154723 MGI:4455105 NCBI chrNW_004955477:4,299,277...4,510,702
Ensembl chrNW_004955477:4,297,588...4,510,959
JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within ISO (MGI:3514096|PMID:12615897)
(MGI:2447929|PMID:12504013)
MGI PMID:12504013 PMID:12615897 MGI:2447929 MGI:3514096 NCBI chrNW_004955429:19,461,446...19,501,908
Ensembl chrNW_004955429:19,461,528...19,505,321
JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO RGD PMID:17148264 RGD:1601086 NCBI chrNW_004955495:1,465,529...1,505,379
Ensembl chrNW_004955495:1,465,480...1,505,462
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO RGD PMID:17148264 RGD:1601086 NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta ISO RGD PMID:17148264 RGD:1601086 NCBI chrNW_004955422:28,380,595...28,427,012
Ensembl chrNW_004955422:28,380,591...28,421,301
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO (PMID:19234442) UniProt PMID:19234442 NCBI chrNW_004955444:8,336,071...8,655,041
Ensembl chrNW_004955444:8,495,530...8,655,100
JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO (PMID:19234442) UniProt PMID:19234442 NCBI chrNW_004955452:7,148,762...7,273,886
Ensembl chrNW_004955452:7,150,886...7,255,159
JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO gamma irradiation RGD PMID:20385203 RGD:4145425 NCBI chrNW_004955495:1,561,464...1,573,282
Ensembl chrNW_004955495:1,561,714...1,574,755
JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chrNW_004955419:14,729,275...14,732,971
Ensembl chrNW_004955419:14,728,816...14,732,971
JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chrNW_004955545:352,170...394,751
Ensembl chrNW_004955545:351,872...396,052
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:18397884) UniProt PMID:18397884 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036
JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (MGI:4943978|PMID:21390131)
(MGI:1859491|PMID:10823907)
MGI PMID:10823907 PMID:21390131 MGI:1859491 MGI:4943978 NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193
JBrowse link
G LOC102011010 steroid 17-alpha-hydroxylase/17,20 lyase ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chrNW_004955485:7,615,132...7,652,899
Ensembl chrNW_004955485:7,645,363...7,650,658
JBrowse link
G LOC102014960 cholesterol side-chain cleavage enzyme, mitochondrial ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chrNW_004955450:3,433,310...3,484,462
Ensembl chrNW_004955450:3,474,491...3,484,232
JBrowse link
G LOC102023780 aromatase ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chrNW_004955409:3,198,622...3,313,072
Ensembl chrNW_004955409:3,266,233...3,313,142
JBrowse link
G LOC102024786 vitamin D 25-hydroxylase ISO RGD PMID:16806633 RGD:1601035 NCBI chrNW_004955414:29,929,130...29,948,151
Ensembl chrNW_004955414:29,928,644...29,948,484
JBrowse link
G Lzic leucine zipper and CTNNBIP1 domain containing ISO RGD PMID:19444910 RGD:2314410 NCBI chrNW_004955486:3,655,745...3,666,828
Ensembl chrNW_004955486:3,655,812...3,666,828
JBrowse link
G Mecp2 methyl-CpG binding protein 2 ISO RGD PMID:17148264 RGD:1601086 NCBI chrNW_004955580:674,014...737,586
Ensembl chrNW_004955580:679,109...735,288
JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) UniProt PMID:27568553 NCBI chrNW_004955408:726,124...758,851 JBrowse link
G Mta1 metastasis associated 1 involved_in ISO (PMID:19805145)
(MGI:4366101|PMID:19805145)
UniProt PMID:19805145 MGI:4366101 NCBI chrNW_004955538:3,630,383...3,671,005
Ensembl chrNW_004955538:3,634,341...3,671,005
JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chrNW_004955403:7,603,002...7,610,925
Ensembl chrNW_004955403:7,604,144...7,611,042
JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISO (PMID:19605351), (PMID:19683501) UniProt PMID:19605351 PMID:19683501 NCBI chrNW_004955458:3,835,205...3,836,841
Ensembl chrNW_004955458:3,835,205...3,840,634
JBrowse link
G Nek1 NIMA related kinase 1 acts_upstream_of_or_within ISO (MGI:3522367|PMID:15604234) MGI PMID:15604234 MGI:3522367 NCBI chrNW_004955403:36,710,248...36,878,901
Ensembl chrNW_004955403:36,720,162...36,881,891
JBrowse link
G Nes nestin ISO RGD PMID:12445635 RGD:1642076 NCBI chrNW_004955545:2,748,132...2,756,595
Ensembl chrNW_004955545:2,748,078...2,756,301
JBrowse link
G Nhej1 non-homologous end joining factor 1 involved_in ISO (PMID:16439205) UniProt PMID:16439205 NCBI chrNW_004955453:14,278,773...14,362,167
Ensembl chrNW_004955453:14,281,069...14,363,876
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (PMID:15456759) UniProt PMID:15456759 NCBI chrNW_004955491:8,177,422...8,219,764
Ensembl chrNW_004955491:8,177,422...8,219,766
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (MGI:5014034|PMID:20150414) MGI PMID:20150414 MGI:5014034 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Rad54b RAD54 homolog B acts_upstream_of_or_within ISO (MGI:3615835|PMID:16428451)
(MGI:3836659|PMID:19061978)
MGI PMID:16428451 PMID:19061978 MGI:3615835 MGI:3836659 NCBI chrNW_004955417:10,598,295...10,685,999
Ensembl chrNW_004955417:10,597,450...10,686,005
JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO (MGI:3836659|PMID:19061978)
(MGI:3615835|PMID:16428451), (MGI:5014034|PMID:20150414)
MGI PMID:16428451 PMID:19061978 PMID:20150414 MGI:3615835 MGI:3836659 MGI:5014034 NCBI chrNW_004955464:11,996,512...12,033,525
Ensembl chrNW_004955464:11,996,512...12,033,490
JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:20173098) UniProt PMID:20173098 NCBI chrNW_004955484:2,824,057...2,857,321
Ensembl chrNW_004955484:2,824,422...2,858,283
JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (PMID:19203578), (PMID:19203579) UniProt PMID:19203578 PMID:19203579 NCBI chrNW_004955420:12,656,815...12,676,836
Ensembl chrNW_004955420:12,657,272...12,676,426
JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO (PMID:18001824), (PMID:18001825) UniProt PMID:18001824 PMID:18001825 NCBI chrNW_004955437:5,807,592...5,832,213
Ensembl chrNW_004955437:5,809,082...5,832,057
JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:19444910 RGD:2314410 NCBI chrNW_004955414:19,850,523...19,904,879
Ensembl chrNW_004955414:19,850,530...19,905,266
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:8706124)
(MGI:82530|PMID:8706124)
UniProt PMID:8706124 MGI:82530 NCBI chrNW_004955414:22,117,929...22,121,744
Ensembl chrNW_004955414:22,117,930...22,121,744
JBrowse link
G Star steroidogenic acute regulatory protein ISO enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISO (MGI:5284815|PMID:12234250) UniProt PMID:12234250 MGI:5284815 NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058
JBrowse link
G Top2a DNA topoisomerase II alpha ISO RGD PMID:22965249 RGD:13432139 NCBI chrNW_004955451:14,928,273...14,964,855
Ensembl chrNW_004955451:14,929,136...14,964,723
JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:12773567) UniProt PMID:12773567 NCBI chrNW_004955501:4,907,687...4,974,995
Ensembl chrNW_004955501:4,908,137...4,976,453
JBrowse link
G Tp53bp2 tumor protein p53 binding protein 2 acts_upstream_of_or_within ISO (MGI:3624572|PMID:16702401) MGI PMID:16702401 MGI:3624572 NCBI chrNW_004955520:1,254,853...1,285,118
Ensembl chrNW_004955520:1,257,216...1,285,322
JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISO (PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 NCBI chrNW_004955408:29,154,373...29,274,817
Ensembl chrNW_004955408:29,154,629...29,274,856
JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO (PMID:16901786) UniProt PMID:16901786 NCBI chrNW_004955412:15,425,136...15,469,819
Ensembl chrNW_004955412:15,426,159...15,443,023
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 ISO RGD PMID:19714308 RGD:2312872 NCBI chrNW_004955435:5,390,745...5,410,025
Ensembl chrNW_004955435:5,390,751...5,411,691
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (MGI:3761960|PMID:17713479) MGI PMID:17713479 MGI:3761960 NCBI chrNW_004955418:27,174,510...27,426,245
Ensembl chrNW_004955418:27,173,659...27,426,264
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO (MGI:3613277|PMID:15979950)
(MGI:5007842|PMID:21568942)
MGI PMID:15979950 PMID:21568942 MGI:3613277 MGI:5007842 NCBI chrNW_004955413:27,135,785...27,158,344
Ensembl chrNW_004955413:27,135,805...27,159,750
JBrowse link
cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:16213212), (PMID:9925639) CAFA PMID:9925639 PMID:16213212 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:9925639) BHF-UCL PMID:9925639 NCBI chrNW_004955508:3,337,036...3,440,313
Ensembl chrNW_004955508:3,337,432...3,440,257
JBrowse link
G Bcl2l1 BCL2 like 1 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) MGI PMID:15231831 MGI:3057092 NCBI chrNW_004955422:29,254,440...29,307,104
Ensembl chrNW_004955422:29,254,216...29,308,174
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (MGI:1354114|PMID:10710310) MGI PMID:10710310 MGI:1354114 NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479
JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO (MGI:1354114|PMID:10710310) MGI PMID:10710310 MGI:1354114 NCBI chrNW_004955455:2,969,113...3,008,004
Ensembl chrNW_004955455:2,969,270...3,003,173
JBrowse link
G Cryab crystallin alpha B acts_upstream_of_or_within ISO (PMID:23542032) MGI PMID:23542032 NCBI chrNW_004955412:13,626,018...13,629,495
Ensembl chrNW_004955412:13,625,363...13,640,426
JBrowse link
G Ddias DNA damage induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) MGI PMID:17515607 MGI:3718924 NCBI chrNW_004955414:9,607,338...9,636,941
Ensembl chrNW_004955414:9,607,064...9,630,781
JBrowse link
G Egr1 early growth response 1 involved_in ISO (MGI:3830454|PMID:19057511) BHF-UCL PMID:19057511 MGI:3830454 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
G Elk1 ETS transcription factor ELK1 ISO RGD PMID:17949253 RGD:7488908 NCBI chrNW_004955516:431,081...444,871
Ensembl chrNW_004955516:430,775...444,871
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 acts_upstream_of_or_within ISO (MGI:5506835|PMID:23637614) MGI PMID:23637614 MGI:5506835 NCBI chrNW_004955439:4,226,530...4,234,390
Ensembl chrNW_004955439:4,226,530...4,234,261
JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004955476:11,508,446...11,510,333
Ensembl chrNW_004955476:11,508,126...11,510,333
JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:26359349) UniProt PMID:26359349 NCBI chrNW_004955454:2,907,265...2,932,352
Ensembl chrNW_004955454:2,907,265...2,932,351
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO RGD PMID:20470193 RGD:11354917 NCBI chrNW_004955419:3,055,420...3,060,208
Ensembl chrNW_004955419:3,055,420...3,062,131
JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) MGI PMID:24217620 NCBI chrNW_004955452:3,044,042...3,104,650
Ensembl chrNW_004955452:3,044,264...3,104,418
JBrowse link
G LOC102004641 cytochrome b-245 light chain ISO RGD PMID:18640264 RGD:2317861 NCBI chrNW_004955541:2,570,843...2,573,822
Ensembl chrNW_004955541:2,569,727...2,574,118
JBrowse link
G LOC102025775 histone H2AX ISO RGD PMID:17552875 RGD:8693710 NCBI chrNW_004955412:20,203,173...20,204,714
Ensembl chrNW_004955412:20,203,772...20,204,203
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:11836244) UniProt PMID:11836244 NCBI chrNW_004955449:1,976,186...2,139,044 JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808
JBrowse link
G Nox4 NADPH oxidase 4 ISO RGD PMID:18640264 RGD:2317861 NCBI chrNW_004955414:4,062,337...4,220,032
Ensembl chrNW_004955414:4,062,081...4,212,746
JBrowse link
G Rad51 RAD51 recombinase ISO RGD PMID:9885240 RGD:9831175 NCBI chrNW_004955416:7,566,715...7,590,628
Ensembl chrNW_004955416:7,566,686...7,590,628
JBrowse link
G Rnf4 ring finger protein 4 ISO RGD PMID:22661230 RGD:9480235 NCBI chrNW_004955514:1,501,943...1,525,689
Ensembl chrNW_004955514:1,511,062...1,523,714
JBrowse link
G Rpl13a ribosomal protein L13a ISO RGD PMID:10483362 RGD:11036101 NCBI chrNW_004955559:1,358,479...1,362,663
Ensembl chrNW_004955559:1,358,486...1,362,663
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) CAFA PMID:16213212 NCBI chrNW_004955467:8,519,760...8,525,514
Ensembl chrNW_004955467:8,519,760...8,527,182
JBrowse link
G Tlk2 tousled like kinase 2 involved_in ISO (PMID:12660173) UniProt PMID:12660173 NCBI chrNW_004955478:9,100,863...9,229,448
Ensembl chrNW_004955478:9,100,863...9,231,281
JBrowse link
G Tmem109 transmembrane protein 109 acts_upstream_of_or_within ISO (PMID:23542032) MGI PMID:23542032 NCBI chrNW_004955511:5,557,322...5,564,866
Ensembl chrNW_004955511:5,562,206...5,565,267
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:16213212)
(MGI:1354114|PMID:10710310)
CAFA
MGI
PMID:10710310 PMID:16213212 MGI:1354114 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:3818783|PMID:18045533) MGI PMID:18045533 MGI:3818783 NCBI chrNW_004955532:533,877...535,767
Ensembl chrNW_004955532:533,877...535,767
JBrowse link
G Tspyl5 TSPY like 5 involved_in ISO (PMID:20079711) UniProt PMID:20079711 NCBI chrNW_004955417:13,133,655...13,136,768
Ensembl chrNW_004955417:13,135,178...13,136,413
JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:21639834) UniProt PMID:21639834 NCBI chrNW_004955463:7,495,243...7,633,532
Ensembl chrNW_004955463:7,525,100...7,633,596
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO (PMID:26359349) UniProt PMID:26359349 NCBI chrNW_004955453:16,967,453...17,054,634
Ensembl chrNW_004955453:16,967,453...17,054,634
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:26359349) UniProt PMID:26359349 NCBI chrNW_004955413:27,135,785...27,158,344
Ensembl chrNW_004955413:27,135,805...27,159,750
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO (PMID:18280240) UniProt PMID:18280240 NCBI chrNW_004955412:5,423,866...5,533,728
Ensembl chrNW_004955412:5,423,855...5,534,408
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (MGI:3583382|PMID:15980864) MGI PMID:15980864 MGI:3583382 NCBI chrNW_004955537:82,724...134,609
Ensembl chrNW_004955537:81,920...134,609
JBrowse link
cellular response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbc3 BCL2 binding component 3 acts_upstream_of_or_within ISO (MGI:3690827|PMID:16286009) MGI PMID:16286009 MGI:3690827 NCBI chrNW_004955574:1,167,790...1,174,966
Ensembl chrNW_004955574:1,167,242...1,174,966
JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:23509288) UniProt PMID:23509288 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479
JBrowse link
G Clock clock circadian regulator involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004955447:15,394,496...15,537,969
Ensembl chrNW_004955447:15,454,630...15,530,906
JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:21373644) UniProt PMID:21373644 NCBI chrNW_004955420:2,769,542...2,827,843
Ensembl chrNW_004955420:2,768,800...2,828,230
JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta involved_in ISO (PMID:8168075) UniProt PMID:8168075 NCBI chrNW_004955454:2,284,892...2,299,169 JBrowse link
G Fbxo4 F-box protein 4 acts_upstream_of_or_within ISO (MGI:5299398|PMID:21911473) MGI PMID:21911473 MGI:5299398 NCBI chrNW_004955426:26,046,742...26,066,747
Ensembl chrNW_004955426:26,046,742...26,063,388
JBrowse link
G Fignl1 fidgetin like 1 involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chrNW_004955456:3,588,190...3,594,559
Ensembl chrNW_004955456:3,588,714...3,594,559
JBrowse link
G Gadd45a growth arrest and DNA damage inducible alpha involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chrNW_004955423:23,656,516...23,658,367
Ensembl chrNW_004955423:23,656,458...23,658,367
JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chrNW_004955553:2,186,590...2,258,964
Ensembl chrNW_004955553:2,186,590...2,259,456
JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004955456:5,465,180...5,476,380
Ensembl chrNW_004955456:5,465,182...5,474,303
JBrowse link
G Ifi16 interferon gamma inducible protein 16 involved_in ISO (PMID:14654789) UniProt PMID:14654789 NCBI chrNW_004955468:10,828,726...10,845,853 JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20687897) UniProt PMID:20687897 NCBI chrNW_004955416:7,870,521...8,020,862
Ensembl chrNW_004955416:7,870,258...7,961,812
JBrowse link
G Ints7 integrator complex subunit 7 involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004955406:5,299,696...5,371,496
Ensembl chrNW_004955406:5,299,697...5,371,896
JBrowse link
G Itgb1 integrin subunit beta 1 ISO RGD PMID:19714308 RGD:2312872 NCBI chrNW_004955462:4,454,809...4,483,227
Ensembl chrNW_004955462:4,454,809...4,484,842
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO (MGI:3842254|PMID:17916808) MGI PMID:17916808 MGI:3842254 NCBI chrNW_004955449:13,387,013...13,520,879
Ensembl chrNW_004955449:13,448,084...13,520,879
JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chrNW_004955605:7,585...32,650
Ensembl chrNW_004955605:8,977...10,539
JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:29463814) UniProt PMID:29463814 NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193
JBrowse link
G Mapk14 mitogen-activated protein kinase 14 involved_in ISO (PMID:20160708) BHF-UCL PMID:20160708 NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083
JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:26415228 RGD:13204741 NCBI chrNW_004955486:1,937,873...1,962,577
Ensembl chrNW_004955486:1,937,802...1,962,772
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO RGD PMID:9780001 RGD:2316946 NCBI chrNW_004955477:7,103,035...7,375,073
Ensembl chrNW_004955477:7,102,977...7,376,530
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase ISO RGD PMID:27681750 RGD:13781886 NCBI chrNW_004955410:10,717,664...10,742,109
Ensembl chrNW_004955410:10,717,664...10,751,177
JBrowse link
G Net1 neuroepithelial cell transforming 1 involved_in ISO (PMID:21373644) UniProt PMID:21373644 NCBI chrNW_004955421:22,105,292...22,154,368
Ensembl chrNW_004955421:22,105,257...22,156,292
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004955426:20,035,605...20,042,340
Ensembl chrNW_004955426:20,035,605...20,041,974
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:23509288), (PMID:23754376) UniProt PMID:23509288 PMID:23754376 NCBI chrNW_004955416:7,566,715...7,590,628
Ensembl chrNW_004955416:7,566,686...7,590,628
JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chrNW_004955413:2,335,431...2,362,781
Ensembl chrNW_004955413:2,334,911...2,361,806
JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004955422:18,079,634...18,146,122
Ensembl chrNW_004955422:18,079,652...18,085,548
JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO (PMID:21659603) UniProt PMID:21659603 NCBI chrNW_004955429:18,408,121...18,415,832
Ensembl chrNW_004955429:18,408,117...18,415,832
JBrowse link
G Rhob ras homolog family member B involved_in ISO (PMID:21373644) UniProt PMID:21373644 NCBI chrNW_004955469:2,964,968...2,966,998
Ensembl chrNW_004955469:2,965,041...2,965,631
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (MGI:5882892|PMID:16213212) CAFA PMID:16213212 MGI:5882892 NCBI chrNW_004955467:8,519,760...8,525,514
Ensembl chrNW_004955467:8,519,760...8,527,182
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:5297784|PMID:17612497) UniProt PMID:17612497 MGI:5297784 NCBI chrNW_004955425:20,280,725...20,307,663
Ensembl chrNW_004955425:20,279,963...20,307,663
JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO (MGI:3690827|PMID:16286009) MGI PMID:16286009 MGI:3690827 NCBI chrNW_004955454:8,759,860...8,763,603
Ensembl chrNW_004955454:8,758,636...8,764,427
JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288), (PMID:23754376) UniProt PMID:23509288 PMID:23754376 NCBI chrNW_004955454:7,360,144...7,710,077
Ensembl chrNW_004955454:7,359,670...7,711,680
JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in ISO (PMID:23754376) UniProt PMID:23754376 NCBI chrNW_004955570:799,332...808,368
Ensembl chrNW_004955570:799,332...808,368
JBrowse link
G Tank TRAF family member associated NFKB activator involved_in ISO (PMID:25861989) UniProt PMID:25861989 NCBI chrNW_004955449:12,470,203...12,561,364
Ensembl chrNW_004955449:12,470,085...12,561,370
JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (MGI:3842254|PMID:17916808) RGD
MGI
PMID:17916808 PMID:25600523 MGI:3842254 RGD:11073671 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 involved_in ISO (PMID:25749521) BHF-UCL PMID:25749521 NCBI chrNW_004955511:2,359,581...2,378,389
Ensembl chrNW_004955511:2,359,444...2,378,559
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:20160708)
(MGI:3690827|PMID:16286009)
(MGI:5882892|PMID:16213212)
BHF-UCL
MGI
CAFA
PMID:16213212 PMID:16286009 PMID:20160708 MGI:3690827 MGI:5882892 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:26323318) ParkinsonsUK-UCL PMID:26323318 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Ccnd2 cyclin D2 acts_upstream_of_or_within ISO (MGI:5500853|PMID:23714078) MGI PMID:23714078 MGI:5500853 NCBI chrNW_004955413:2,083,351...2,108,450
Ensembl chrNW_004955413:2,083,351...2,103,430
JBrowse link
G Dbn1 drebrin 1 ISO RGD PMID:23578130 RGD:10398817 NCBI chrNW_004955408:29,695,442...29,705,417
Ensembl chrNW_004955408:29,696,266...29,705,416
JBrowse link
G Dnm2 dynamin 2 ISO RGD PMID:15994918 RGD:9685147 NCBI chrNW_004955495:1,860,644...1,934,589
Ensembl chrNW_004955495:1,860,644...1,934,818
JBrowse link
G Hamp hepcidin antimicrobial peptide ISO RGD PMID:17090718 RGD:11041722 NCBI chrNW_004955468:4,576,080...4,577,591
Ensembl chrNW_004955468:4,575,510...4,577,649
JBrowse link
G Kat5 lysine acetyltransferase 5 ISO RGD PMID:15985650 RGD:2316135 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036
JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO (PMID:17468178) UniProt PMID:17468178 NCBI chrNW_004955426:21,666,958...21,841,515
Ensembl chrNW_004955426:21,666,857...21,841,515
JBrowse link
G Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 involved_in ISO (PMID:26323318) ParkinsonsUK-UCL PMID:26323318 NCBI chrNW_004955406:41,412,855...41,448,551
Ensembl chrNW_004955406:41,417,983...41,449,177
JBrowse link
G Prap1 proline rich acidic protein 1 involved_in ISO (MGI:6694360|PMID:32629119) UniProt PMID:32629119 MGI:6694360 NCBI chrNW_004955477:10,982,530...11,002,747 JBrowse link
G Sfrp1 secreted frizzled related protein 1 involved_in ISO (MGI:4835111|PMID:19778523) UniProt PMID:19778523 MGI:4835111 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514
JBrowse link
G Sfrp2 secreted frizzled related protein 2 involved_in ISO (MGI:4835111|PMID:19778523) UniProt PMID:19778523 MGI:4835111 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO RGD PMID:21915754 RGD:9586753 NCBI chrNW_004955416:9,962,736...10,035,433
Ensembl chrNW_004955416:9,962,897...10,035,278
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 ISO RGD PMID:11966321 RGD:727219 NCBI chrNW_004955453:16,967,453...17,054,634
Ensembl chrNW_004955453:16,967,453...17,054,634
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 ISO RGD PMID:11175667 RGD:2317102 NCBI chrNW_004955413:27,135,785...27,158,344
Ensembl chrNW_004955413:27,135,805...27,159,750
JBrowse link
negative regulation of response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkdc protein kinase, DNA-activated, catalytic subunit ISO RGD PMID:22981234 RGD:8696027 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
positive regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmga2 high mobility group AT-hook 2 involved_in ISO (PMID:16061642) UniProt PMID:16061642 NCBI chrNW_004955458:12,493,790...12,624,805 JBrowse link
regulation of cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO RGD PMID:28007901 RGD:12879399 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO (PMID:19735555) UniProt PMID:19735555 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
JBrowse link
response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:3057047|PMID:15480992) MGI PMID:15480992 MGI:3057047 NCBI chrNW_004955413:6,471,933...6,480,475
Ensembl chrNW_004955413:6,471,953...6,480,469
JBrowse link
G Bak1 BCL2 antagonist/killer 1 acts_upstream_of_or_within ISO (MGI:3722566|PMID:17068116) MGI PMID:17068116 MGI:3722566 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (MGI:3722566|PMID:17068116) MGI PMID:17068116 MGI:3722566 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:1858868|PMID:10815637), (MGI:2156164|PMID:8170972), (MGI:3722566|PMID:17068116), (MGI:62849|PMID:8372353) MGI PMID:8170972 PMID:8372353 PMID:10815637 PMID:17068116 MGI:1858868 MGI:2156164 MGI:3722566 MGI:62849 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (MGI:1277623|PMID:9699678)
(MGI:87113|PMID:9126738)
MGI PMID:9126738 PMID:9699678 MGI:1277623 MGI:87113 NCBI chrNW_004955431:13,449,287...13,526,878
Ensembl chrNW_004955431:13,449,543...13,527,432
JBrowse link
G Casp6 caspase 6 ISO RGD PMID:10590178 RGD:2301333 NCBI chrNW_004955496:575,839...584,287
Ensembl chrNW_004955496:577,832...584,287
JBrowse link
G Cav1 caveolin 1 ISO RGD PMID:17993744 RGD:2289115 NCBI chrNW_004955432:22,258,262...22,292,403
Ensembl chrNW_004955432:22,258,250...22,292,403
JBrowse link
G Cbl Cbl proto-oncogene ISO RGD PMID:16301331 RGD:1579837 NCBI chrNW_004955412:20,307,011...20,388,539
Ensembl chrNW_004955412:20,307,011...20,388,539
JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO (MGI:3032464|PMID:14744935) MGI PMID:14744935 MGI:3032464 NCBI chrNW_004955455:2,969,113...3,008,004
Ensembl chrNW_004955455:2,969,270...3,003,173
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 ISO RGD PMID:19084914 RGD:2306303 NCBI chrNW_004955433:748,392...750,890
Ensembl chrNW_004955433:748,284...750,927
JBrowse link
G Dcun1d3 defective in cullin neddylation 1 domain containing 3 involved_in ISO (PMID:18823379) UniProt PMID:18823379 NCBI chrNW_004955493:153,226...186,824
Ensembl chrNW_004955493:153,226...186,451
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:19169047 RGD:9685443 NCBI chrNW_004955507:2,035,918...2,141,327
Ensembl chrNW_004955507:2,036,050...2,137,377
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO (MGI:3054497|PMID:15340056) MGI PMID:15340056 MGI:3054497 NCBI chrNW_004955556:745,175...812,215
Ensembl chrNW_004955556:748,231...813,133
JBrowse link
G Fancd2 FA complementation group D2 involved_in ISO (PMID:12874027) UniProt PMID:12874027 NCBI chrNW_004955561:1,460,080...1,538,026
Ensembl chrNW_004955561:1,464,869...1,538,045
JBrowse link
G Gata3 GATA binding protein 3 ISO RGD PMID:19084914 RGD:2306303 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
JBrowse link
G Gpx1 glutathione peroxidase 1 acts_upstream_of_or_within ISO (MGI:3044494|PMID:15182862) MGI PMID:15182862 MGI:3044494 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Il1a interleukin 1 alpha ISO RGD PMID:16524844 RGD:2311096 NCBI chrNW_004955470:1,527,710...1,538,418
Ensembl chrNW_004955470:1,527,674...1,538,466
JBrowse link
G Il1b interleukin 1 beta ISO RGD PMID:16524844 RGD:2311096 NCBI chrNW_004955470:1,486,936...1,491,888
Ensembl chrNW_004955470:1,486,967...1,491,947
JBrowse link
G Il6r interleukin 6 receptor ISO RGD PMID:14751512 RGD:1625440 NCBI chrNW_004955545:932,814...979,359
Ensembl chrNW_004955545:950,765...981,762
JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO (MGI:1312981|PMID:9823897), (MGI:1860400|PMID:10911993) MGI PMID:9823897 PMID:10911993 MGI:1312981 MGI:1860400 NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193
JBrowse link
G LOC102014960 cholesterol side-chain cleavage enzyme, mitochondrial ISO 137 cesium RGD PMID:18046538 RGD:4831839 NCBI chrNW_004955450:3,433,310...3,484,462
Ensembl chrNW_004955450:3,474,491...3,484,232
JBrowse link
G Men1 menin 1 involved_in ISO (PMID:12874027) UniProt PMID:12874027 NCBI chrNW_004955422:20,356,491...20,363,374
Ensembl chrNW_004955422:20,356,491...20,363,575
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:19179467) UniProt PMID:19179467 NCBI chrNW_004955461:2,714,022...2,718,872
Ensembl chrNW_004955461:2,714,022...2,718,982
JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 ISO RGD PMID:14994994 RGD:10414067 NCBI chrNW_004955489:520,875...557,609
Ensembl chrNW_004955489:520,875...557,615
JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within ISO (MGI:1306978|PMID:9806545)
(MGI:3701394|PMID:11025664)
MGI PMID:9806545 PMID:11025664 MGI:1306978 MGI:3701394 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Polb DNA polymerase beta ISO RGD PMID:12425958 RGD:8694104 NCBI chrNW_004955536:542,179...595,198
Ensembl chrNW_004955536:540,836...595,198
JBrowse link
G Polg DNA polymerase gamma, catalytic subunit ISO RGD PMID:12425958 RGD:8694104 NCBI chrNW_004955416:15,773,005...15,788,736
Ensembl chrNW_004955416:15,773,473...15,788,651
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (MGI:4822286|PMID:20647423) UniProt PMID:20647423 MGI:4822286 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (MGI:1290043|PMID:9768755) MGI PMID:9768755 MGI:1290043 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C ISO RGD PMID:17290791 RGD:1599984 NCBI chrNW_004955406:35,005,577...35,127,395
Ensembl chrNW_004955406:35,005,214...35,129,552
JBrowse link
G Socs3 suppressor of cytokine signaling 3 ISO RGD PMID:14751512 PMID:16937495 RGD:1625440 RGD:2298916 NCBI chrNW_004955506:4,222,455...4,225,563
Ensembl chrNW_004955506:4,222,455...4,225,563
JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO (MGI:3044494|PMID:15182862) MGI PMID:15182862 MGI:3044494 NCBI chrNW_004955439:21,209,101...21,223,538
Ensembl chrNW_004955439:21,209,101...21,224,163
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (MGI:5498602|PMID:23726973) MGI PMID:23726973 MGI:5498602 NCBI chrNW_004955413:2,129,719...2,153,873
Ensembl chrNW_004955413:2,129,678...2,154,380
JBrowse link
G Top1 DNA topoisomerase I ISO RGD PMID:2853856 RGD:2317066 NCBI chrNW_004955445:15,834,017...15,922,785
Ensembl chrNW_004955445:15,834,017...15,922,785
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:7958916)
(MGI:3032464|PMID:14744935)
(MGI:3722566|PMID:17068116)
BHF-UCL
MGI
PMID:7958916 PMID:14744935 PMID:17068116 MGI:3032464 MGI:3722566 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Trim13 tripartite motif containing 13 involved_in ISO (PMID:21333377) UniProt PMID:21333377 NCBI chrNW_004955431:3,324,331...3,395,724
Ensembl chrNW_004955431:3,324,331...3,395,724
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO (MGI:3652689|PMID:16777961) MGI PMID:16777961 MGI:3652689 NCBI chrNW_004955491:6,579,443...6,629,410
Ensembl chrNW_004955491:6,599,085...6,629,439
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO (MGI:1913213|PMID:9875844) MGI PMID:9875844 MGI:1913213 NCBI chrNW_004955418:27,174,510...27,426,245
Ensembl chrNW_004955418:27,173,659...27,426,264
JBrowse link
response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 ISO RGD PMID:9269316 RGD:2306948 NCBI chrNW_004955512:5,686,508...5,703,645 JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:11309417) UniProt PMID:11309417 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687
JBrowse link
G Brca2 BRCA2 DNA repair associated acts_upstream_of_or_within ISO (MGI:1203345|PMID:9660919)
(MGI:3833141|PMID:16859999)
(MGI:1100157|PMID:9398843)
MGI PMID:9398843 PMID:9660919 PMID:16859999 MGI:1100157 MGI:1203345 MGI:3833141 NCBI chrNW_004955431:13,449,287...13,526,878
Ensembl chrNW_004955431:13,449,543...13,527,432
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 acts_upstream_of_or_within ISO (PMID:14636569) MGI PMID:14636569 NCBI chrNW_004955594:551,407...613,772
Ensembl chrNW_004955594:554,081...613,661
JBrowse link
G Casp3 caspase 3 ISO RGD PMID:18239382 RGD:2293328 NCBI chrNW_004955403:24,315,712...24,326,271 JBrowse link
G Ccnd1 cyclin D1 ISO RGD PMID:17148264 RGD:1601086 NCBI chrNW_004955422:16,449,921...16,462,676
Ensembl chrNW_004955422:16,448,770...16,463,300
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A ISO RGD PMID:18413982 RGD:8662408 NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO RGD PMID:17549535 RGD:8661655 NCBI chrNW_004955500:6,860,771...6,885,466
Ensembl chrNW_004955500:6,860,771...6,885,473
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO (MGI:3613277|PMID:15979950) MGI PMID:15979950 MGI:3613277 NCBI chrNW_004955555:2,393,510...2,430,180
Ensembl chrNW_004955555:2,393,278...2,406,582
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO (MGI:3613277|PMID:15979950), (MGI:3699047|PMID:17145777) MGI PMID:15979950 PMID:17145777 MGI:3613277 MGI:3699047 NCBI chrNW_004955556:745,175...812,215
Ensembl chrNW_004955556:748,231...813,133
JBrowse link
G Fga fibrinogen alpha chain ISO RGD PMID:4170424 RGD:11040910 NCBI chrNW_004955471:8,806,964...8,814,671
Ensembl chrNW_004955471:8,806,650...8,816,791
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO RGD PMID:15161688 RGD:9068912 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Il7 interleukin 7 ISO RGD PMID:15799696 RGD:10402940 NCBI chrNW_004955444:2,365,077...2,400,953 JBrowse link
G Kars1 lysyl-tRNA synthetase 1 ISO RGD PMID:4001316 RGD:12910553 NCBI chrNW_004955484:1,924,523...1,939,777
Ensembl chrNW_004955484:1,924,523...1,940,552
JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:9809069) UniProt PMID:9809069 NCBI chrNW_004955404:3,606,077...3,615,193
Ensembl chrNW_004955404:3,606,077...3,615,193
JBrowse link
G Lrp2 LDL receptor related protein 2 ISO RGD PMID:12121845 RGD:1641839 NCBI chrNW_004955449:5,155,109...5,314,886
Ensembl chrNW_004955449:5,160,946...5,314,948
JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO (MGI:2667543|PMID:12687013) MGI PMID:12687013 MGI:2667543 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698
JBrowse link
G Pdxk pyridoxal kinase ISO RGD PMID:2928487 RGD:2303016 NCBI chrNW_004955407:41,482,216...41,494,174
Ensembl chrNW_004955407:41,482,216...41,494,177
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO (MGI:2675761|PMID:12952892) MGI PMID:12952892 MGI:2675761 NCBI chrNW_004955402:44,005,517...44,010,722 JBrowse link
G Rad51 RAD51 recombinase ISO RGD PMID:17148264 RGD:1601086 NCBI chrNW_004955416:7,566,715...7,590,628
Ensembl chrNW_004955416:7,566,686...7,590,628
JBrowse link
G Thbd thrombomodulin ISO RGD PMID:12057911 RGD:634507 NCBI chrNW_004955415:30,222,830...30,226,406 JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:3032953|PMID:11884608)
(MGI:5440773|PMID:22821713)
RGD
MGI
PMID:11884608 PMID:17699727 PMID:22821713 MGI:3032953 MGI:5440773 RGD:2290567 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Vwf von Willebrand factor ISO RGD PMID:8811296 RGD:11079207 NCBI chrNW_004955413:3,672,470...3,825,588
Ensembl chrNW_004955413:3,672,470...3,819,571
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO (MGI:3613277|PMID:15979950) MGI PMID:15979950 MGI:3613277 NCBI chrNW_004955491:6,579,443...6,629,410
Ensembl chrNW_004955491:6,599,085...6,629,439
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within
ISO (PMID:9242410)
(MGI:1913213|PMID:9875844)
UniProt
MGI
PMID:9242410 PMID:9875844 MGI:1913213 NCBI chrNW_004955418:27,174,510...27,426,245
Ensembl chrNW_004955418:27,173,659...27,426,264
JBrowse link
G Xrra1 X-ray radiation resistance associated 1 involved_in ISO (PMID:12908878) UniProt PMID:12908878 NCBI chrNW_004955414:16,825,118...16,893,518
Ensembl chrNW_004955414:16,827,284...16,890,796
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11978
    response to stimulus 6455
      response to abiotic stimulus 1336
        response to radiation 500
          response to ionizing radiation 180
            cellular response to ionizing radiation + 80
            response to X-ray + 42
            response to gamma radiation + 69
paths to the root