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ONTOLOGY REPORT - ANNOTATIONS


Term:response to ionizing radiation
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Accession:GO:0010212 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ionizing radiation stimulus. Ionizing radiation is radiation with sufficient energy to remove electrons from atoms and may arise from spontaneous decay of unstable isotopes, resulting in alpha and beta particles and gamma rays. Ionizing radiation also includes X-rays.
Synonyms:exact_synonym: response to ionising radiation;   response to ionizing radiation stimulus



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response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B IEP RGD PMID:16494520 RGD:1598565 NCBI chr 4:25,242,761...25,325,194
Ensembl chr 4:25,242,798...25,325,199
JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 IEP RGD PMID:17132608 RGD:1598660 NCBI chr 6:9,965,118...9,990,563
Ensembl chr 6:9,965,118...9,990,563
JBrowse link
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:17525340), (PMID:17643121), (PMID:19261748)
Ensembl
UniProt
RGD
PMID:17525340 PMID:17643121 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr14:8,796,281...8,810,625
Ensembl chr14:8,796,266...8,810,622
JBrowse link
G Aen apoptosis enhancing nuclease involved_in ISS
ISO
GO_REF:0000024
(PMID:16171785)
UniProt
RGD
PMID:16171785 GO_REF:0000024 NCBI chr 1:132,815,094...132,824,522
Ensembl chr 1:132,815,142...132,824,523
JBrowse link
G Alad aminolevulinate dehydratase IEP 131Iodine RGD PMID:17916974 RGD:4144160 NCBI chr 5:75,961,993...75,972,334
Ensembl chr 5:75,961,993...75,972,474
JBrowse link
G Atm ATM serine/threonine kinase involved_in
acts_upstream_of_or_within
ISO (PMID:11375976), (PMID:9733515)
MGI:3605986|MGI:894697|MGI:99702 (MGI:1352316|PMID:10639175), (MGI:3836659|PMID:19061978)
RGD PMID:9733515 PMID:10639175 PMID:11375976 PMID:19061978 MGI:1352316 MGI:3836659 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19261748), (PMID:19261749)
UniProt
RGD
PMID:19261748 PMID:19261749 GO_REF:0000024 NCBI chr16:18,068,830...18,074,938
Ensembl chr16:18,068,884...18,074,923
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000104
(PMID:19261748), (PMID:19261749)
UniProt
RGD
PMID:19261748 PMID:19261749 GO_REF:0000024 GO_REF:0000104 NCBI chr 6:24,369,021...24,833,335
Ensembl chr 6:24,369,022...24,833,951
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:107202|MGI:1857429 (MGI:1352316|PMID:10639175), (MGI:3512739|PMID:15578100) RGD PMID:10639175 PMID:15578100 MGI:1352316 MGI:3512739 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Brat1 BRCA1-associated ATM activator 1 involved_in ISO (PMID:16452482) RGD PMID:16452482 NCBI chr12:13,928,889...13,951,760
Ensembl chr12:13,928,898...13,941,248
JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) RGD PMID:17525340 PMID:17643121 PMID:19261748 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 involved_in ISO
ISS
(PMID:17525341), (PMID:19261746), (PMID:19261748)
GO_REF:0000024
RGD
UniProt
PMID:17525341 PMID:19261746 PMID:19261748 GO_REF:0000024 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080
JBrowse link
G Brcc3dc BRCA1/BRCA2-containing complex, subunit 3, domain containing involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 7:44,014,889...44,017,678
Ensembl chr 7:44,005,646...44,016,670
JBrowse link
G Brsk1 BR serine/threonine kinase 1 NOT|involved_in ISO (PMID:15150265) RGD PMID:15150265 NCBI chr 1:69,134,166...69,159,947
Ensembl chr 1:69,134,565...69,160,365
JBrowse link
G Brsk2 BR serine/threonine kinase 2 NOT|involved_in ISS PMID:15150265 UniProt PMID:15150265 RGD:8554801 NCBI chr 1:197,035,522...197,088,624
Ensembl chr 1:197,035,633...197,088,092
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 IEP RGD PMID:16937495 RGD:2298916 NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
JBrowse link
G Clk2 CDC-like kinase 2 involved_in ISO (PMID:20682768) RGD PMID:20682768 NCBI chr 2:174,570,614...174,582,645
Ensembl chr 2:174,570,653...174,588,985
JBrowse link
G Cop1 COP1, E3 ubiquitin ligase involved_in ISO (PMID:19805145) RGD PMID:19805145 NCBI chr13:71,467,164...71,561,826
Ensembl chr13:71,429,961...71,538,890
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr 1:245,535,462...245,543,148
Ensembl chr 1:245,535,462...245,541,573
JBrowse link
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr 8:54,553,165...54,580,758
Ensembl chr 8:54,553,165...54,580,758
JBrowse link
G Cyp2r1 cytochrome P450, family 2, subfamily r, polypeptide 1 IEP RGD PMID:16806633 RGD:1601035 NCBI chr 1:168,749,302...168,798,079
Ensembl chr 1:168,751,038...168,797,759
JBrowse link
G Dclre1c DNA cross-link repair 1C acts_upstream_of_or_within ISO MGI:2667614 (MGI:2447929|PMID:12504013), (MGI:3514096|PMID:12615897) RGD PMID:12504013 PMID:12615897 MGI:2447929 MGI:3514096 NCBI chr17:74,775,828...74,810,089
Ensembl chr17:74,776,935...74,809,186
JBrowse link
G Dnmt1 DNA methyltransferase 1 IEP RGD PMID:17148264 RGD:1601086 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha IEP RGD PMID:17148264 RGD:1601086 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta IEP RGD PMID:17148264 RGD:1601086 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO (PMID:19234442) RGD PMID:19234442 NCBI chr 5:144,806,523...144,934,522
Ensembl chr 5:144,806,577...144,934,518
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP gamma irradiation RGD PMID:20385203 RGD:4145425 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Inip INTS3 and NABP interacting protein involved_in ISO (PMID:19605351), (PMID:19683501) RGD PMID:19605351 PMID:19683501 NCBI chr 5:74,648,392...74,662,628
Ensembl chr 5:74,648,392...74,662,628
JBrowse link
G Ints3 integrator complex subunit 3 involved_in ISO (PMID:19605351), (PMID:19683501) RGD PMID:19605351 PMID:19683501 NCBI chr 2:175,859,421...175,911,683
Ensembl chr 2:175,859,440...175,911,709
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:18397884) RGD PMID:18397884 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Krt14 keratin 14 IEP RGD PMID:12793764 RGD:1600177 NCBI chr10:85,137,932...85,141,990
Ensembl chr10:85,066,802...85,171,799
JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (MGI:1859491|PMID:10823907), (MGI:4943978|PMID:21390131) RGD PMID:10823907 PMID:21390131 MGI:1859491 MGI:4943978 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
JBrowse link
G LOC100302465 hypothetical LOC100302465 involved_in ISO (MGI:4455105|PMID:20154723) RGD PMID:20154723 MGI:4455105 NCBI chr 1:189,059,744...189,293,353
Ensembl chr 1:189,059,746...189,293,435
JBrowse link
G Lzic leucine zipper and CTNNBIP1 domain containing IEP RGD PMID:19444910 RGD:2314410 NCBI chr 5:159,928,260...159,941,512
Ensembl chr 5:159,920,439...159,939,685
JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:17148264 RGD:1601086 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) RGD PMID:27568553 NCBI chr10:34,501,359...34,525,474
Ensembl chr10:34,501,384...34,525,469
JBrowse link
G Mta1 metastasis associated 1 involved_in ISO
ISS
IBA
(PMID:19805145)
(MGI:4366101|PMID:19805145)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:19805145 PMID:21873635 GO_REF:0000024 MGI:4366101, RGD:13792537 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641
JBrowse link
G Nabp1 nucleic acid binding protein 1 involved_in IBA
ISO
ISS
PMID:21873635
(PMID:19605351), (PMID:19683501)
GO_REF:0000024
RGD
UniProt
PMID:19605351 PMID:19683501 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 9:50,098,552...50,133,982
Ensembl chr 9:50,126,726...50,134,107
JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISS
IEA
IBA
ISO
GO_REF:0000024
GO_REF:0000107
PMID:21873635
(PMID:19605351), (PMID:19683501)
UniProt
Ensembl
RGD
PMID:19605351 PMID:19683501 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr 7:830,949...836,551
Ensembl chr 7:830,949...838,027
JBrowse link
G Nek1 NIMA-related kinase 1 acts_upstream_of_or_within ISO MGI:1858122 (MGI:3522367|PMID:15604234) RGD PMID:15604234 MGI:3522367 NCBI chr16:28,998,229...29,125,426
Ensembl chr16:28,998,231...29,117,723
JBrowse link
G Nes nestin IEP RGD PMID:12445635 RGD:1642076 NCBI chr 2:173,437,867...173,447,777
Ensembl chr 2:173,438,734...173,447,777
JBrowse link
G Nhej1 nonhomologous end-joining factor 1 involved_in ISO
ISS
(PMID:16439205) RGD PMID:16439205 PMID:16439205 RGD:8553261 NCBI chr 9:76,526,322...76,622,488
Ensembl chr 9:76,526,324...76,622,444
JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (PMID:15456759) RGD PMID:15456759 NCBI chr 4:7,524,887...7,576,663
Ensembl chr 4:7,525,004...7,576,548
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:1857934 (MGI:5014034|PMID:20150414) RGD PMID:20150414 MGI:5014034 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Rad54b RAD54 homolog B acts_upstream_of_or_within ISO MGI:107202|MGI:3617695|MGI:894697 (MGI:3615835|PMID:16428451), (MGI:3836659|PMID:19061978) RGD PMID:16428451 PMID:19061978 MGI:3615835 MGI:3836659 NCBI chr 5:25,030,885...25,104,616
Ensembl chr 5:25,032,066...25,104,616
JBrowse link
G Rad54l RAD54 like acts_upstream_of_or_within ISO MGI:107202|MGI:2183934|MGI:3605986 (MGI:3615835|PMID:16428451), (MGI:3836659|PMID:19061978), (MGI:5014034|PMID:20150414) RGD PMID:16428451 PMID:19061978 PMID:20150414 MGI:3615835 MGI:3836659 MGI:5014034 NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070
JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:20173098) RGD PMID:20173098 NCBI chr19:39,235,883...39,268,536
Ensembl chr19:39,236,787...39,268,479
JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO
IEA
ISS
(PMID:19203578), (PMID:19203579)
GO_REF:0000104
GO_REF:0000024
RGD
UniProt
PMID:19203578 PMID:19203579 GO_REF:0000024 GO_REF:0000104 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277
JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO
ISS
(PMID:18001824), (PMID:18001825)
GO_REF:0000024
RGD
UniProt
PMID:18001824 PMID:18001825 GO_REF:0000024 NCBI chr20:7,682,258...7,710,448
Ensembl chr20:7,682,322...7,708,491
JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 IEP RGD PMID:19444910 RGD:2314410 NCBI chr 1:156,823,960...156,848,262
Ensembl chr 1:156,823,960...156,848,261
JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in ISO (PMID:8706124)
(MGI:82530|PMID:8706124)
RGD PMID:8706124 MGI:82530 NCBI chr 1:159,892,946...159,896,789
Ensembl chr 1:159,892,859...159,896,794
JBrowse link
G Star steroidogenic acute regulatory protein IEP enriched uranium RGD PMID:18821396 RGD:4770368 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Stk11 serine/threonine kinase 11 involved_in ISS
ISO
GO_REF:0000024
(MGI:5284815|PMID:12234250)
UniProt
RGD
PMID:12234250 GO_REF:0000024 MGI:5284815 NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
JBrowse link
G Ticrr TOPBP1-interacting checkpoint and replication regulator involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:133,597,618...133,639,513
Ensembl chr 1:133,597,716...133,639,523
JBrowse link
G Top2a DNA topoisomerase II alpha IEP RGD PMID:22965249 RGD:13432139 NCBI chr10:83,946,186...83,975,694
Ensembl chr10:83,945,735...83,976,874
JBrowse link
G Topbp1 DNA topoisomerase II binding protein 1 involved_in ISO (PMID:12773567) RGD PMID:12773567 NCBI chr 8:103,887,805...103,931,662
Ensembl chr 8:103,887,865...103,931,674
JBrowse link
G Tp53bp2 tumor protein p53 binding protein, 2 acts_upstream_of_or_within ISO MGI:3625686 (MGI:3624572|PMID:16702401) RGD PMID:16702401 MGI:3624572 NCBI chr13:94,088,769...94,145,436
Ensembl chr13:94,088,709...94,145,432
JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 GO_REF:0000024 GO_REF:0000107 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799
JBrowse link
G Usp28 ubiquitin specific peptidase 28 involved_in ISO
ISS
(PMID:16901786)
GO_REF:0000024
RGD
UniProt
PMID:16901786 GO_REF:0000024 NCBI chr 8:49,325,766...49,386,229
Ensembl chr 8:49,325,867...49,386,229
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 IEP RGD PMID:19714308 RGD:2312872 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771|MGI:3047571|MGI:3641440 (MGI:3761960|PMID:17713479) RGD PMID:17713479 MGI:3761960 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 acts_upstream_of_or_within ISO MGI:2179954|MGI:3625858 (MGI:3613277|PMID:15979950), (MGI:5007842|PMID:21568942) RGD PMID:15979950 PMID:21568942 MGI:3613277 MGI:5007842 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
JBrowse link
cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:16213212), (PMID:9925639) RGD PMID:9925639 PMID:16213212 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (PMID:9925639) RGD PMID:9925639 NCBI chr 8:96,426,704...96,524,152
Ensembl chr 8:96,426,724...96,524,136
JBrowse link
G Bcl2l1 Bcl2-like 1 acts_upstream_of_or_within ISO (MGI:3057092|PMID:15231831) RGD PMID:15231831 MGI:3057092 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A acts_upstream_of_or_within ISO (MGI:1354114|PMID:10710310) RGD PMID:10710310 MGI:1354114 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO MGI:2386905 (MGI:1354114|PMID:10710310) RGD PMID:10710310 MGI:1354114 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286
JBrowse link
G Cryab crystallin, alpha B acts_upstream_of_or_within ISO (PMID:23542032) RGD PMID:23542032 NCBI chr 8:51,093,441...51,099,161
Ensembl chr 8:51,093,441...51,099,157
JBrowse link
G Cyba cytochrome b-245 alpha chain IEP RGD PMID:18640264 RGD:2317861 NCBI chr19:50,487,598...50,495,669
Ensembl chr19:50,487,597...50,495,721
JBrowse link
G Ddias DNA damage-induced apoptosis suppressor acts_upstream_of_or_within ISO (MGI:3718924|PMID:17515607) RGD PMID:17515607 MGI:3718924 NCBI chr 1:146,906,150...146,930,462
Ensembl chr 1:146,906,154...146,930,462
JBrowse link
G Egr1 early growth response 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:3830454|PMID:19057511)
Ensembl
RGD
PMID:19057511 GO_REF:0000107 MGI:3830454 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Elk1 ETS transcription factor ELK1 IDA RGD PMID:17949253 RGD:7488908 NCBI chr  X:1,138,826...1,155,713
Ensembl chr  X:1,139,756...1,155,713
JBrowse link
G Gtf2h5 general transcription factor IIH subunit 5 acts_upstream_of_or_within ISO MGI:5514340 (MGI:5506835|PMID:23637614) RGD PMID:23637614 MGI:5506835 NCBI chr 1:46,656,804...46,663,512
Ensembl chr 1:46,656,859...46,664,939
JBrowse link
G H2ax H2A.X variant histone IDA RGD PMID:17552875 RGD:8693710 NCBI chr 8:44,671,927...44,673,257
Ensembl chr 8:44,671,786...44,673,239
JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:26359349) RGD PMID:26359349 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP RGD PMID:20470193 RGD:11354917 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Kdm1a lysine demethylase 1A acts_upstream_of_or_within ISO (PMID:24217620) RGD PMID:24217620 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:11836244) RGD PMID:11836244 NCBI chr 3:57,128,561...57,289,943
Ensembl chr 3:57,130,551...57,289,626
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
G Mir21 microRNA 21 involved_in ISO (PMID:19826040) RGD PMID:19826040 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Nox4 NADPH oxidase 4 IEP RGD PMID:18640264 RGD:2317861 NCBI chr 1:140,900,886...141,078,844
Ensembl chr 1:140,901,097...141,077,406
JBrowse link
G Rad51 RAD51 recombinase IEP RGD PMID:9885240 RGD:9831175 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Rnf4 ring finger protein 4 IMP RGD PMID:22661230 RGD:9480235 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566
JBrowse link
G Rpl13a ribosomal protein L13A IEP RGD PMID:10483362 RGD:11036101 NCBI chr 1:95,609,374...95,612,557
Ensembl chr 1:95,609,370...95,620,463
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO
IEA
(PMID:16213212)
GO_REF:0000107
RGD
Ensembl
PMID:16213212 GO_REF:0000107 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
JBrowse link
G Tlk2 tousled-like kinase 2 involved_in ISO (PMID:12660173) RGD PMID:12660173 NCBI chr10:90,154,449...90,248,562
Ensembl chr10:90,156,813...90,248,561
JBrowse link
G Tmem109 transmembrane protein 109 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
PMID:21873635
GO_REF:0000002
(PMID:23542032)
InterPro
RGD
PMID:23542032 PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 1:207,519,628...207,530,245
Ensembl chr 1:207,519,624...207,530,215
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:16213212)
(MGI:1354114|PMID:10710310)
RGD PMID:10710310 PMID:16213212 MGI:1354114 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:3818783|PMID:18045533) RGD PMID:18045533 MGI:3818783 NCBI chr 8:109,706,613...109,707,913
Ensembl chr 8:109,706,613...109,708,796
JBrowse link
G Tspyl5 TSPY-like 5 involved_in ISO (PMID:20079711) RGD PMID:20079711 NCBI chr 7:64,881,092...64,885,538
Ensembl chr 7:64,884,225...64,885,457
JBrowse link
G Wrn WRN RecQ like helicase involved_in ISO (PMID:21639834) RGD PMID:21639834 NCBI chr16:58,763,517...58,898,604
Ensembl chr16:58,763,504...58,895,450
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IBA
ISO
PMID:21873635
(PMID:26359349)
RGD PMID:26359349 PMID:21873635 RGD:13792537 NCBI chr 9:73,955,220...74,044,020
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in IBA
ISO
PMID:21873635
(PMID:26359349)
RGD PMID:26359349 PMID:21873635 RGD:13792537 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO
ISS
(PMID:18280240)
GO_REF:0000024
RGD
UniProt
PMID:18280240 GO_REF:0000024 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (MGI:3583382|PMID:15980864) RGD PMID:15980864 MGI:3583382 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
cellular response to ionizing radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO (PMID:14636569) RGD PMID:14636569 NCBI chr 6:24,369,021...24,833,335
Ensembl chr 6:24,369,022...24,833,951
JBrowse link
G Bard1 BRCA1 associated RING domain 1 involved_in ISO
IEA
(PMID:14636569)
GO_REF:0000107
RGD
Ensembl
PMID:14636569 GO_REF:0000107 NCBI chr 9:72,616,070...72,694,553
Ensembl chr 9:72,623,155...72,694,265
JBrowse link
G Bbc3 Bcl-2 binding component 3 acts_upstream_of_or_within ISO MGI:1096393|MGI:98834 (MGI:3690827|PMID:16286009) RGD PMID:16286009 MGI:3690827 NCBI chr 1:77,013,281...77,022,509
Ensembl chr 1:77,014,543...77,022,509
JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:23509288) RGD PMID:23509288 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Brca1 BRCA1, DNA repair associated involved_in ISO
IEA
(PMID:14636569)
GO_REF:0000107
RGD
Ensembl
PMID:14636569 GO_REF:0000107 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304
JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in ISO
IEA
(PMID:14636569)
GO_REF:0000107
RGD
Ensembl
PMID:14636569 GO_REF:0000107 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 involved_in ISO (PMID:14636569) RGD PMID:14636569 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A involved_in ISO (PMID:20160708) RGD PMID:20160708 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Clock clock circadian regulator involved_in IEA
ISO
GO_REF:0000107
(PMID:21659603)
Ensembl
RGD
PMID:21659603 GO_REF:0000107 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:21373644) RGD PMID:21373644 NCBI chr 2:109,975,813...110,037,911
Ensembl chr 2:109,975,813...110,037,911
JBrowse link
G Eef1d eukaryotic translation elongation factor 1 delta involved_in ISO (PMID:8168075) RGD PMID:8168075 NCBI chr 7:107,581,930...107,596,735
Ensembl chr 7:107,581,930...107,608,799
JBrowse link
G Fbxo4 F-box protein 4 acts_upstream_of_or_within ISO (MGI:5299398|PMID:21911473) RGD PMID:21911473 MGI:5299398 NCBI chr 2:53,174,798...53,187,792
Ensembl chr 2:53,174,798...53,187,792
JBrowse link
G Fignl1 fidgetin-like 1 involved_in ISO
ISS
(PMID:23754376)
GO_REF:0000024
RGD
UniProt
PMID:23754376 GO_REF:0000024 NCBI chr14:86,368,670...86,381,728
Ensembl chr14:86,368,675...86,377,455
JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible, alpha involved_in IEA
ISO
GO_REF:0000107
(PMID:20160708)
Ensembl
RGD
PMID:20160708 GO_REF:0000107 NCBI chr 4:96,154,789...96,157,091
Ensembl chr 4:96,154,789...96,157,115
JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in ISO (PMID:20160708) RGD PMID:20160708 NCBI chr10:100,881,404...100,949,193
Ensembl chr10:100,869,718...100,949,309
JBrowse link
G Hus1 HUS1 checkpoint clamp component involved_in ISO (PMID:21659603) RGD PMID:21659603 NCBI chr14:83,688,702...83,703,466
Ensembl chr14:83,688,708...83,703,442
JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20687897) RGD PMID:20687897 NCBI chr 3:106,368,455...106,465,716
Ensembl chr 3:106,368,455...106,467,911
JBrowse link
G Ints7 integrator complex subunit 7 involved_in ISO (PMID:21659603) RGD PMID:21659603 NCBI chr13:103,155,123...103,207,953
Ensembl chr13:103,155,090...103,208,592
JBrowse link
G Itgb1 integrin subunit beta 1 IEP RGD PMID:19714308 RGD:2312872 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Itgb6 integrin subunit beta 6 acts_upstream_of_or_within ISO (MGI:3842254|PMID:17916808) RGD PMID:17916808 MGI:3842254 NCBI chr 3:45,046,295...45,170,532
Ensembl chr 3:45,048,044...45,121,671
JBrowse link
G Kdm4d lysine demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) RGD PMID:24550317 NCBI chr 8:11,279,756...11,304,920
Ensembl chr 8:11,268,859...11,305,290
JBrowse link
G Lig4 DNA ligase 4 involved_in ISO UniProtKB:G5EGA3 (PMID:29463814) RGD PMID:29463814 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in ISO
IEA
(PMID:20160708)
GO_REF:0000107
RGD
Ensembl
PMID:20160708 GO_REF:0000107 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Mfn2 mitofusin 2 IEP RGD PMID:26415228 RGD:13204741 NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase IEP RGD PMID:9780001 RGD:2316946 NCBI chr 1:191,710,980...191,937,760
Ensembl chr 1:191,710,930...191,937,756
JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IEP RGD PMID:27681750 RGD:13781886 NCBI chr 6:49,425,316...49,462,109
Ensembl chr 6:49,424,332...49,462,100
JBrowse link
G Net1 neuroepithelial cell transforming 1 involved_in ISO (PMID:21373644) RGD PMID:21373644 NCBI chr17:66,341,251...66,370,445
Ensembl chr17:66,340,728...66,370,441
JBrowse link
G Rad1 RAD1 checkpoint DNA exonuclease involved_in ISO (PMID:21659603) RGD PMID:21659603 NCBI chr 2:59,461,597...59,469,707
Ensembl chr 2:59,461,607...59,469,689
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:14636569), (PMID:23509288), (PMID:23754376) RGD PMID:14636569 PMID:23509288 PMID:23754376 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:23754376) RGD PMID:23754376 NCBI chr 4:159,759,454...159,772,524
Ensembl chr 4:159,759,459...159,772,524
JBrowse link
G Rad9a RAD9 checkpoint clamp component A involved_in ISO
IBA
(PMID:21659603)
PMID:21873635
RGD PMID:21659603 PMID:21873635 RGD:13792537 NCBI chr 1:201,488,511...201,553,582
Ensembl chr 1:201,487,136...201,553,608
JBrowse link
G Rad9b RAD9 checkpoint clamp component B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:34,217,868...34,248,380
Ensembl chr12:34,218,024...34,248,372
JBrowse link
G Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 involved_in ISO (PMID:21659603) RGD PMID:21659603 NCBI chr 4:161,634,047...161,639,437
Ensembl chr 4:161,634,048...161,639,371
JBrowse link
G Rhno1-ps2 RAD9-HUS1-RAD1 interacting nuclear orphan 1, pseudogene 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:184,691,837...184,692,948
Ensembl chr 2:184,691,839...184,692,926
JBrowse link
G Rhob ras homolog family member B involved_in ISO
ISS
(PMID:21373644)
GO_REF:0000024
RGD
UniProt
PMID:21373644 GO_REF:0000024 NCBI chr 6:31,363,752...31,365,926
Ensembl chr 6:31,363,548...31,366,108
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (MGI:5882892|PMID:16213212) RGD PMID:16213212 MGI:5882892 NCBI chr10:53,610,836...53,613,966
Ensembl chr10:53,610,421...53,613,966
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (MGI:5297784|PMID:17612497) RGD PMID:17612497 MGI:5297784 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Snai2 snail family transcriptional repressor 2 acts_upstream_of_or_within ISO MGI:2181667|MGI:98834 (MGI:3690827|PMID:16286009) RGD PMID:16286009 MGI:3690827 NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288), (PMID:23754376) RGD PMID:23509288 PMID:23754376 NCBI chr11:84,766,593...85,007,597
Ensembl chr11:84,766,593...85,007,600
JBrowse link
G Swi5 SWI5 homologous recombination repair protein involved_in ISS
ISO
GO_REF:0000024
(PMID:23754376)
UniProt
RGD
PMID:23754376 GO_REF:0000024 NCBI chr 3:15,574,687...15,583,760
Ensembl chr 3:15,564,715...15,583,805
JBrowse link
G Tank TRAF family member-associated NFKB activator involved_in ISO (PMID:25861989) RGD PMID:25861989 NCBI chr 3:46,114,253...46,190,270
Ensembl chr 3:46,114,274...46,190,264
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within IEP
ISO
MGI:3513111 (MGI:3842254|PMID:17916808) RGD PMID:17916808 PMID:25600523 MGI:3842254, RGD:11073671 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tnks1bp1 tankyrase 1 binding protein 1 involved_in ISO
IBA
(PMID:25749521)
PMID:21873635
RGD PMID:25749521 PMID:21873635 RGD:13792537 NCBI chr 3:70,135,335...70,160,071
Ensembl chr 3:70,137,837...70,160,038
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:20160708)
(MGI:5882892|PMID:16213212)
MGI:1096393|MGI:2181667 (MGI:3690827|PMID:16286009)
RGD PMID:16213212 PMID:16286009 PMID:20160708 MGI:3690827 MGI:5882892 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:26323318) RGD PMID:26323318 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Ccnd2 cyclin D2 acts_upstream_of_or_within ISO MGI:2180642 (MGI:5500853|PMID:23714078) RGD PMID:23714078 MGI:5500853 NCBI chr 4:159,966,883...159,989,261
Ensembl chr 4:159,962,363...159,989,495
JBrowse link
G Dbn1 drebrin 1 IEP RGD PMID:23578130 RGD:10398817 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
G Dnm2 dynamin 2 IEP RGD PMID:15994918 RGD:9685147 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:17090718 RGD:11041722 NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
JBrowse link
G Kat5 lysine acetyltransferase 5 IEP RGD PMID:15985650 RGD:2316135 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:23331620 RGD:126790570 NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095
JBrowse link
G Nipbl NIPBL, cohesin loading factor involved_in ISO (PMID:17468178) RGD PMID:17468178 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
JBrowse link
G Nucks1 nuclear casein kinase and cyclin-dependent kinase substrate 1 involved_in ISO (PMID:26323318) RGD PMID:26323318 NCBI chr13:43,345,091...43,374,316
Ensembl chr13:43,345,115...43,370,229
JBrowse link
G Prap1 proline-rich acidic protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6694360|PMID:32629119)
UniProt
RGD
PMID:32629119 GO_REF:0000024 MGI:6694360 NCBI chr 1:194,883,078...194,886,874
Ensembl chr 1:194,883,078...194,886,872
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:4835111|PMID:19778523)
Ensembl
RGD
PMID:19778523 GO_REF:0000107 MGI:4835111 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO (MGI:4835111|PMID:19778523) RGD PMID:19778523 MGI:4835111 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 IEP RGD PMID:21915754 RGD:9586753 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11966321 PMID:21873635 RGD:727219, RGD:13792537 NCBI chr 9:73,955,220...74,044,020
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:11175667 PMID:21873635 RGD:2317102, RGD:13792537 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
JBrowse link
negative regulation of response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkdc protein kinase, DNA-activated, catalytic subunit IMP RGD PMID:22981234 RGD:8696027 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
positive regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmga2 high mobility group AT-hook 2 involved_in ISO (PMID:16061642) RGD PMID:16061642 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
regulation of cellular response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase IMP RGD PMID:28007901 RGD:12879399 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
regulation of cellular response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata3 GATA binding protein 3 involved_in ISO
ISS
(PMID:19735555)
GO_REF:0000024
RGD
UniProt
PMID:19735555 GO_REF:0000024 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
response to gamma radiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO MGI:2157186 (MGI:3057047|PMID:15480992) RGD PMID:15480992 MGI:3057047 NCBI chr 4:155,800,030...155,828,515
Ensembl chr 4:155,800,887...155,827,390
JBrowse link
G Bak1 BCL2-antagonist/killer 1 acts_upstream_of_or_within ISO MGI:2159364 (MGI:3722566|PMID:17068116) RGD PMID:17068116 MGI:3722566 NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
JBrowse link
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO MGI:1857429 (MGI:3722566|PMID:17068116) RGD PMID:17068116 MGI:3722566 NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
JBrowse link
G Bcl2 BCL2, apoptosis regulator acts_upstream_of_or_within ISO MGI:2156165 (MGI:1858868|PMID:10815637), (MGI:2156164|PMID:8170972), (MGI:3722566|PMID:17068116), (MGI:62849|PMID:8372353) RGD PMID:8170972 PMID:8372353 PMID:10815637 PMID:17068116 MGI:1858868 MGI:2156164 MGI:3722566 MGI:62849 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743
JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2177233|MGI:2653913|MGI:2653914 (MGI:1277623|PMID:9699678), (MGI:87113|PMID:9126738)
Ensembl
RGD
PMID:9126738 PMID:9699678 GO_REF:0000107 MGI:1277623 MGI:87113 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567
JBrowse link
G Casp6 caspase 6 IEP RGD PMID:10590178 RGD:2301333 NCBI chr 2:218,466,063...218,478,503
Ensembl chr 2:218,466,076...218,478,502
JBrowse link
G Cav1 caveolin 1 IEP RGD PMID:17993744 RGD:2289115 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Cbl Cbl proto-oncogene IEP RGD PMID:16301331 RGD:1579837 NCBI chr 8:44,487,824...44,571,620
Ensembl chr 8:44,489,410...44,571,176
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP RGD PMID:19084914 RGD:2306303 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccl7 C-C motif chemokine ligand 7 IEP RGD PMID:20185578 RGD:5134998 NCBI chr10:67,016,446...67,018,296
Ensembl chr10:67,016,446...67,018,303
JBrowse link
G Chek2 checkpoint kinase 2 acts_upstream_of_or_within ISO (MGI:3032464|PMID:14744935) RGD PMID:14744935 MGI:3032464 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:17,193,364...17,195,143
Ensembl chr14:17,193,365...17,195,215
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 IEP RGD PMID:19084914 RGD:2306303 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:17,181,030...17,183,075
Ensembl chr14:17,181,062...17,183,075
JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 IEP RGD PMID:20185578 RGD:5134998 NCBI chr14:17,310,089...17,312,303
Ensembl chr14:17,310,426...17,313,093
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP 137 cesium RGD PMID:18046538 RGD:4831839 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Dcun1d3 defective in cullin neddylation 1 domain containing 3 involved_in ISO
ISS
(PMID:18823379)
GO_REF:0000024
RGD
UniProt
PMID:18823379 GO_REF:0000024 NCBI chr 1:174,243,001...174,285,647
Ensembl chr 1:66,494,848...66,496,343
Ensembl chr 1:66,494,848...66,496,343
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:19169047 RGD:9685443 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (MGI:3054497|PMID:15340056) RGD PMID:15340056 MGI:3054497 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587
JBrowse link
G Fancd2 FA complementation group D2 involved_in ISO (PMID:12874027) RGD PMID:12874027 NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412
JBrowse link
G Gata3 GATA binding protein 3 IEP RGD PMID:19084914 RGD:2306303 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:104887|MGI:98352 (MGI:3044494|PMID:15182862)
Ensembl
RGD
PMID:15182862 GO_REF:0000107 MGI:3044494 NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
JBrowse link
G Il1a interleukin 1 alpha IEP RGD PMID:16524844 RGD:2311096 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822
JBrowse link
G Il1b interleukin 1 beta IEP RGD PMID:16524844 RGD:2311096 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Il6r interleukin 6 receptor IEP RGD PMID:14751512 RGD:1625440 NCBI chr 2:175,289,157...175,347,719
Ensembl chr 2:175,298,686...175,347,536
JBrowse link
G Lig4 DNA ligase 4 acts_upstream_of_or_within ISO MGI:1857732 (MGI:1312981|PMID:9823897), (MGI:1860400|PMID:10911993) RGD PMID:9823897 PMID:10911993 MGI:1312981 MGI:1860400 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
JBrowse link
G Men1 menin 1 involved_in ISO (PMID:12874027) RGD PMID:12874027 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISS
ISO
GO_REF:0000024
(PMID:19179467)
UniProt
RGD
PMID:19179467 GO_REF:0000024 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 IEP RGD PMID:14994994 RGD:10414067 NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
JBrowse link
G Pml PML nuclear body scaffold acts_upstream_of_or_within ISO MGI:104662|MGI:2429949 (MGI:1306978|PMID:9806545), (MGI:3701394|PMID:11025664) RGD PMID:9806545 PMID:11025664 MGI:1306978 MGI:3701394 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Polb DNA polymerase beta IEP RGD PMID:12425958 RGD:8694104 NCBI chr16:69,379,438...69,402,710
Ensembl chr16:69,379,400...69,404,812
JBrowse link
G Polg DNA polymerase gamma, catalytic subunit IEP RGD PMID:12425958 RGD:8694104 NCBI chr 1:133,382,764...133,399,578
Ensembl chr 1:133,382,766...133,398,567
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4822286|PMID:20647423)
UniProt
RGD
PMID:20647423 GO_REF:0000024 MGI:4822286 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO MGI:2383951 (MGI:1290043|PMID:9768755) RGD PMID:9768755 MGI:1290043 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C IDA RGD PMID:17290791 RGD:1599984 NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
JBrowse link
G Socs3 suppressor of cytokine signaling 3 IEP RGD PMID:14751512 PMID:16937495 RGD:1625440, RGD:2298916 NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787
JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO MGI:104887|MGI:98352 (MGI:3044494|PMID:15182862) RGD PMID:15182862 MGI:3044494 NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO MGI:4391656 (MGI:5498602|PMID:23726973) RGD PMID:23726973 MGI:5498602 NCBI chr 4:159,927,138...159,946,094
Ensembl chr 4:159,927,139...159,946,029
JBrowse link
G Top1 DNA topoisomerase I IEP RGD PMID:2853856 RGD:2317066 NCBI chr 3:149,293,658...149,375,405
Ensembl chr 3:149,293,403...149,376,623
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:7958916)
MGI:1857590 (MGI:3032464|PMID:14744935), (MGI:3722566|PMID:17068116)
RGD PMID:7958916 PMID:14744935 PMID:17068116 MGI:3032464 MGI:3722566 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO (PMID:21333377) RGD PMID:21333377 NCBI chr15:35,733,548...35,772,676
Ensembl chr15:35,734,107...35,772,677
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO MGI:3654106 (MGI:3652689|PMID:16777961) RGD PMID:16777961 MGI:3652689 NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 acts_upstream_of_or_within ISO MGI:1926771 (MGI:1913213|PMID:9875844) RGD PMID:9875844 MGI:1913213 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
JBrowse link
response to X-ray term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:9269316 PMID:21873635 RGD:2306948, RGD:13792537 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:11309417) RGD PMID:11309417 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Brca2 BRCA2, DNA repair associated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1930616|MGI:2177226|MGI:2448890 (MGI:1100157|PMID:9398843), (MGI:1203345|PMID:9660919), (MGI:3833141|PMID:16859999)
Ensembl
RGD
PMID:9398843 PMID:9660919 PMID:16859999 GO_REF:0000107 MGI:1100157 MGI:1203345 MGI:3833141 NCBI chr12:59,492...103,789
Ensembl chr12:59,819...100,567
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 acts_upstream_of_or_within ISO (PMID:14636569) RGD PMID:14636569 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080
JBrowse link
G Casp3 caspase 3 IEP RGD PMID:18239382 RGD:2293328 NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
JBrowse link
G Ccnd1 cyclin D1 IEP RGD PMID:17148264 RGD:1601086 NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A IEP RGD PMID:18413982 RGD:8662408 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEP RGD PMID:17549535 RGD:8661655 NCBI chr 7:129,098,489...129,127,620
Ensembl chr 7:129,098,786...129,127,546
JBrowse link
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit acts_upstream_of_or_within ISO MGI:2183944 (MGI:3613277|PMID:15979950) RGD PMID:15979950 MGI:3613277 NCBI chr 1:78,971,310...79,007,963
Ensembl chr 1:78,996,390...79,007,963
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (MGI:3613277|PMID:15979950), (MGI:3699047|PMID:17145777) RGD PMID:15979950 PMID:17145777 MGI:3613277 MGI:3699047 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587
JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit acts_upstream_of_or_within ISO MGI:2449180 (MGI:3699047|PMID:17145777) RGD PMID:17145777 MGI:3699047 NCBI chr 2:39,647,393...39,686,229
Ensembl chr 2:39,647,452...39,684,859
JBrowse link
G Fga fibrinogen alpha chain IEP RGD PMID:4170424 RGD:11040910 NCBI chr 2:168,365,364...168,381,533
Ensembl chr 2:168,374,120...168,381,528
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:15161688 RGD:9068912 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hp haptoglobin IEP RGD PMID:12379430 RGD:1626377 NCBI chr19:37,539,626...37,544,178
Ensembl chr19:37,539,627...37,544,523
JBrowse link
G Il7 interleukin 7 IEP RGD PMID:15799696 RGD:10402940 NCBI chr 2:94,235,219...94,280,075
Ensembl chr 2:94,234,766...94,280,075
JBrowse link
G Kars1 lysyl-tRNA synthetase 1 IDA RGD PMID:4001316 RGD:12910553 NCBI chr19:39,957,846...39,976,886
Ensembl chr19:39,957,846...39,977,632
JBrowse link
G Lig4 DNA ligase 4 involved_in ISO (PMID:9809069) RGD PMID:9809069 NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
JBrowse link
G Lrp2 LDL receptor related protein 2 IDA RGD PMID:12121845 RGD:1641839 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
JBrowse link
G Msh2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2667543|PMID:12687013)
Ensembl
RGD
PMID:12687013 GO_REF:0000107 MGI:2667543 NCBI chr 6:6,813,793...6,872,960
Ensembl chr 6:6,813,795...6,872,938
JBrowse link
G Pdxk pyridoxal kinase IEP RGD PMID:2928487 RGD:2303016 NCBI chr20:10,210,393...10,231,937
Ensembl chr20:10,210,289...10,232,110
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 acts_upstream_of_or_within ISO MGI:2678372 (MGI:2675761|PMID:12952892) RGD PMID:12952892 MGI:2675761 NCBI chr18:59,986,187...59,990,174
Ensembl chr18:59,986,017...59,992,429
JBrowse link
G Rad51 RAD51 recombinase IEP RGD PMID:17148264 RGD:1601086 NCBI chr 3:106,099,753...106,125,038
Ensembl chr 3:106,100,381...106,125,035
JBrowse link
G Thbd thrombomodulin IEP RGD PMID:12057911 RGD:634507 NCBI chr 3:135,863,366...135,867,018
Ensembl chr 3:135,862,835...135,867,193
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within IEP
IMP
ISO
MGI:1857263 (MGI:3032953|PMID:11884608), (MGI:5440773|PMID:22821713) RGD PMID:11884608 PMID:22821713 PMID:17699727 PMID:28834365 MGI:3032953 MGI:5440773, RGD:2290567, RGD:14995504 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:8811296 RGD:11079207 NCBI chr 4:158,360,152...158,491,539
Ensembl chr 4:158,360,152...158,491,539
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO MGI:2662686 (MGI:3613277|PMID:15979950) RGD PMID:15979950 MGI:3613277 NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482
JBrowse link
G Xrcc4 X-ray repair cross complementing 4 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:9242410)
MGI:1926771 (MGI:1913213|PMID:9875844)
PMID:21873635
RGD PMID:9242410 PMID:9875844 PMID:21873635 MGI:1913213, RGD:13792537 NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
JBrowse link
G Xrra1 X-ray radiation resistance associated 1 involved_in ISO (PMID:12908878) RGD PMID:12908878 NCBI chr 1:154,183,330...154,247,883
Ensembl chr 1:154,183,377...154,247,895
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20091
    response to stimulus 10575
      response to abiotic stimulus 1581
        response to radiation 558
          response to ionizing radiation 197
            cellular response to ionizing radiation + 88
            response to X-ray + 45
            response to gamma radiation + 75
paths to the root