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ONTOLOGY REPORT - ANNOTATIONS

Term:specification of animal organ identity
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Accession:GO:0010092 term browser browse the term
Definition:The regionalization process in which the identity of an animal organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.


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specification of animal organ identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBR1 T-box brain transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20615956) Ensembl
MGI		 PMID:20615956 GO_REF:0000107 NCBI chr 2:161,416,297...161,425,870
Ensembl chr 2:161,416,297...161,425,870 		JBrowse link
activation of prostate induction by androgen receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17317769) Ensembl
MGI		 PMID:17317769 GO_REF:0000107 NCBI chr  X:67,544,021...67,730,619
Ensembl chr  X:67,544,021...67,730,619 		JBrowse link
fibroblast growth factor receptor signaling pathway involved in mammary gland specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16720875) Ensembl
MGI
TreeGrafter		 PMID:16720875 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706 		JBrowse link
G FGFR2 fibroblast growth factor receptor 2 involved_in
acts_upstream_of_or_within		 ISS
ISO		 (PMID:16720875) UniProt
MGI		 PMID:16720875 GO_REF:0000024 NCBI chr10:121,478,330...121,598,458
Ensembl chr10:121,478,332...121,598,458 		JBrowse link
heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26295701) Ensembl
MGI		 PMID:26295701 GO_REF:0000107 NCBI chr 8:117,794,490...118,111,826
Ensembl chr 8:117,794,490...118,111,826 		JBrowse link
heart induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 involved_in IDA (PMID:19736317) BHF-UCL PMID:19736317 NCBI chr20:6,767,686...6,780,246
Ensembl chr20:6,767,686...6,780,246 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in IMP (PMID:20702560) BHF-UCL PMID:20702560 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G DKK1 dickkopf WNT signaling pathway inhibitor 1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:52,314,281...52,317,657
Ensembl chr10:52,314,281...52,318,042 		JBrowse link
G GATA5 GATA binding protein 5 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr20:62,463,497...62,475,995
Ensembl chr20:62,463,497...62,475,995 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:89,732,446...89,751,249
Ensembl chr15:89,749,875...89,751,249 		JBrowse link
G POU5F1 POU class 5 homeobox 1 involved_in IMP (PMID:19736317) BHF-UCL PMID:19736317 NCBI chr 6:31,164,337...31,170,682
Ensembl chr 6:31,164,337...31,180,731 		JBrowse link
G ROBO1 roundabout guidance receptor 1 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 3:78,597,239...79,767,998
Ensembl chr 3:78,597,239...79,767,998 		JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 3:75,906,675...77,649,964
Ensembl chr 3:75,906,695...77,649,964 		JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19686689)
(PMID:19805295)		 Ensembl
MGI		 PMID:19686689 PMID:19805295 GO_REF:0000107 NCBI chr 3:41,199,505...41,240,443
Ensembl chr 3:41,194,741...41,260,096 		JBrowse link
G WNT2 Wnt family member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19686689) Ensembl
MGI		 PMID:19686689 GO_REF:0000107 NCBI chr 7:117,275,451...117,323,058
Ensembl chr 7:117,275,451...117,323,152 		JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19686689) Ensembl
MGI		 PMID:19686689 GO_REF:0000107 NCBI chr 1:112,466,541...112,530,165
Ensembl chr 1:112,466,541...112,530,165 		JBrowse link
mammary gland specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF10 fibroblast growth factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16720875) Ensembl
MGI		 PMID:16720875 GO_REF:0000107 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16720875) Ensembl
MGI		 PMID:16720875 GO_REF:0000107 NCBI chr 7:41,960,949...42,264,268
Ensembl chr 7:41,960,949...42,264,100 		JBrowse link
G PAX3 paired box 3 acts_upstream_of_or_within ISO (PMID:16720875) MGI PMID:16720875 NCBI chr 2:222,199,887...222,298,998
Ensembl chr 2:222,199,887...222,298,998 		JBrowse link
organ induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9806931) Ensembl
MGI		 PMID:9806931 GO_REF:0000107 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G FGF1 fibroblast growth factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15576401) Ensembl
MGI		 PMID:15576401 GO_REF:0000107 NCBI chr 5:142,592,178...142,698,070
Ensembl chr 5:142,592,178...142,698,070 		JBrowse link
G FGF10 fibroblast growth factor 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:10964474
(PMID:12810586)		 MGI
Ensembl		 PMID:10964474 PMID:12810586 GO_REF:0000107 RGD:8554722 NCBI chr 5:44,300,247...44,389,420
Ensembl chr 5:44,300,247...44,389,706 		JBrowse link
G FGF2 fibroblast growth factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15576401) Ensembl
MGI		 PMID:15576401 GO_REF:0000107 NCBI chr 4:122,826,682...122,898,236
Ensembl chr 4:122,826,682...122,898,236 		JBrowse link
G FGF3 fibroblast growth factor 3 acts_upstream_of_or_within ISO (PMID:12810586)
(PMID:15741321)		 MGI PMID:12810586 PMID:15741321 NCBI chr11:69,809,968...69,819,416
Ensembl chr11:69,809,968...69,819,416 		JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15741321) Ensembl
MGI		 PMID:15741321 GO_REF:0000107 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371 		JBrowse link
G FGFR1 fibroblast growth factor receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15576401) Ensembl
MGI		 PMID:15576401 GO_REF:0000107 NCBI chr 8:38,411,143...38,468,635
Ensembl chr 8:38,400,215...38,468,834 		JBrowse link
G FGFR4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO (PMID:15576401) MGI PMID:15576401 NCBI chr 5:177,086,915...177,098,144
Ensembl chr 5:177,086,905...177,098,144 		JBrowse link
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15569927) Ensembl
MGI		 PMID:15569927 GO_REF:0000107 NCBI chr12:69,470,388...69,579,793
Ensembl chr12:69,470,349...69,579,793 		JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15691764) Ensembl
MGI		 PMID:15691764 GO_REF:0000107 NCBI chr 5:37,812,677...37,840,041
Ensembl chr 5:37,812,677...37,840,041 		JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12050119) Ensembl
MGI		 PMID:12050119 GO_REF:0000107 NCBI chr 7:27,181,157...27,185,232
Ensembl chr 7:27,181,157...27,185,232 		JBrowse link
G HOXC11 homeobox C11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12050119) Ensembl
MGI		 PMID:12050119 GO_REF:0000107 NCBI chr12:53,973,126...53,977,643
Ensembl chr12:53,973,126...53,977,643 		JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (PMID:12050119) MGI PMID:12050119 NCBI chr 2:176,107,280...176,115,679
Ensembl chr 2:176,104,216...176,109,754 		JBrowse link
G SIX1 SIX homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 (PMID:12783782) Ensembl
MGI
UniProt		 PMID:12783782 GO_REF:0000024 GO_REF:0000107 NCBI chr14:60,643,421...60,649,477
Ensembl chr14:60,643,421...60,658,259 		JBrowse link
G SPRY1 sprouty RTK signaling antagonist 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15691764) Ensembl
MGI		 PMID:15691764 GO_REF:0000107 NCBI chr 4:123,396,795...123,403,760
Ensembl chr 4:123,396,795...123,403,760 		JBrowse link
primary heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257 		JBrowse link
G WNT11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:76,186,325...76,210,761
Ensembl chr11:76,186,325...76,210,736 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539 		JBrowse link
pronephric field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX2 paired box 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr10:100,735,396...100,829,944
Ensembl chr10:100,735,396...100,829,944 		JBrowse link
G PAX8 paired box 8 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:113,215,997...113,278,921
Ensembl chr 2:113,215,997...113,278,921 		JBrowse link
secondary heart field specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AXIN2 axin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22711842) Ensembl
MGI		 PMID:22711842 GO_REF:0000107 NCBI chr17:65,528,563...65,561,648
Ensembl chr17:65,528,563...65,561,648 		JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in IMP (PMID:20702560) BHF-UCL PMID:20702560 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761 		JBrowse link
G FOXH1 forkhead box H1 involved_in IEA
ISS		 Ensembl
BHF-UCL		 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:144,473,412...144,475,849
Ensembl chr 8:144,473,412...144,475,849 		JBrowse link
G ISL1 ISL LIM homeobox 1 involved_in IMP (PMID:20520780) BHF-UCL PMID:20520780 NCBI chr 5:51,383,448...51,394,730
Ensembl chr 5:51,383,448...51,394,730 		JBrowse link
G LRP2 LDL receptor related protein 2 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:169,127,109...169,362,534
Ensembl chr 2:169,127,109...169,362,534 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257 		JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in ISS
IEA		 BHF-UCL
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr15:89,732,446...89,751,249
Ensembl chr15:89,749,875...89,751,249 		JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22711842) Ensembl
MGI		 PMID:22711842 GO_REF:0000107 NCBI chr 4:26,105,449...26,435,131
Ensembl chr 4:26,163,455...26,435,131 		JBrowse link
G SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17519332) Ensembl
MGI		 PMID:17519332 GO_REF:0000107 NCBI chr 7:151,238,780...151,277,149
Ensembl chr 7:151,238,764...151,277,896 		JBrowse link
G WNT11 Wnt family member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:76,186,325...76,210,761
Ensembl chr11:76,186,325...76,210,736 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,465,715...55,505,263
Ensembl chr 3:55,465,715...55,490,539 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19669
    multicellular organismal process 8456
      pattern specification process 526
        regionalization 476
          specification of animal organ identity 42
            heart field specification + 18
            kidney field specification + 2
            lung field specification + 3
            mammary gland specification + 4
            organ induction + 26
            pancreas field specification + 0
            prostate field specification + 1
Path 2
Term Annotations click to browse term
  biological_process 19669
    developmental process 7610
      anatomical structure development 7020
        anatomical structure morphogenesis 3195
          animal organ morphogenesis 1242
            animal organ formation 79
              specification of animal organ identity 42
                heart field specification + 18
                kidney field specification + 2
                lung field specification + 3
                mammary gland specification + 4
                organ induction + 26
                pancreas field specification + 0
                prostate field specification + 1
paths to the root