Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:anterior/posterior pattern specification
go back to main search page
Accession:GO:0009952 term browser browse the term
Definition:The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.
Synonyms:related_synonym: anterior/posterior pattern formation


show annotations for term's descendants           Sort by:
 
anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR2A activin A receptor type 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1344152|PMID:10452853), (MGI:3689276|PMID:16991118) Ensembl
MGI
PMID:10452853 PMID:16991118 GO_REF:0000107 MGI:1344152 MGI:3689276 NCBI chr19:49,642,429...49,726,720
Ensembl chr19:49,641,219...49,723,420
JBrowse link
G ACVR2B activin A receptor type 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1344152|PMID:10452853), (MGI:3689276|PMID:16991118)
(MGI:3525050|PMID:15542835)
(MGI:3695190|PMID:16845371)
(MGI:3689276|PMID:16991118), (MGI:3695190|PMID:16845371), (MGI:894948|PMID:9242489)
Ensembl
MGI
PMID:9242489 PMID:10452853 PMID:15542835 PMID:16845371 PMID:16991118 GO_REF:0000107 MGI:1344152 MGI:3525050 MGI:3689276 MGI:3695190 MGI:894948 NCBI chr23:8,211,555...8,225,596
Ensembl chr23:8,192,483...8,218,894
JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within ISO (MGI:3703483|PMID:17067568)
(MGI:3612223|PMID:16368932)
(MGI:3530707|PMID:15652703), (MGI:3578600|PMID:15872003)
MGI PMID:15652703 PMID:15872003 PMID:16368932 PMID:17067568 MGI:3530707 MGI:3578600 MGI:3612223 MGI:3703483 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030
JBrowse link
G ALX1 ALX homeobox 1 acts_upstream_of_or_within ISO (MGI:1314705|PMID:9847249) MGI PMID:9847249 MGI:1314705 NCBI chr15:26,838,615...26,858,786
Ensembl chr15:26,834,670...26,858,803
JBrowse link
G ALX4 ALX homeobox 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1098911|PMID:9374397), (MGI:1314705|PMID:9847249)
(MGI:1314705|PMID:9847249)
Ensembl
MGI
PMID:9374397 PMID:9847249 GO_REF:0000107 MGI:1098911 MGI:1314705 NCBI chr18:44,922,042...44,967,557
Ensembl chr18:44,922,150...44,967,550
JBrowse link
G APC APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (MGI:2449253|PMID:12645927) MGI PMID:12645927 MGI:2449253 NCBI chr 3:252,052...380,506
Ensembl chr 3:253,081...322,993
JBrowse link
G ARC activity regulated cytoskeleton associated protein acts_upstream_of_or_within ISO (MGI:1355000|PMID:10727859) MGI PMID:10727859 MGI:1355000 NCBI chr13:36,743,027...36,744,266 JBrowse link
G BARX1 BARX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3766872|PMID:17855428) Ensembl
MGI
PMID:17855428 GO_REF:0000107 MGI:3766872 NCBI chr 1:98,036,444...98,039,818
Ensembl chr 1:98,036,227...98,039,845
JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:12,641,872...12,647,519
Ensembl chr20:12,642,702...12,647,525
JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (MGI:3051920|PMID:15136140) MGI PMID:15136140 MGI:3051920 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923
JBrowse link
G BMPR2 bone morphogenetic protein receptor type 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3525050|PMID:15542835)
(MGI:1855789|PMID:10772805)
Ensembl
MGI
PMID:10772805 PMID:15542835 GO_REF:0000107 MGI:1855789 MGI:3525050 NCBI chr37:11,342,292...11,540,199
Ensembl chr37:11,342,384...11,533,024
JBrowse link
G BPTF bromodomain PHD finger transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3840601|PMID:18974875)
(MGI:3821803|PMID:18794365)
Ensembl
MGI
PMID:18794365 PMID:18974875 GO_REF:0000107 MGI:3821803 MGI:3840601 NCBI chr 9:12,586,107...12,703,296
Ensembl chr 9:12,590,333...12,703,422
JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (MGI:3525050|PMID:15542835) MGI PMID:15542835 MGI:3525050 NCBI chr38:70,921...75,149
Ensembl chr38:70,452...72,976
JBrowse link
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4422144|PMID:19754878) Ensembl
MGI
PMID:19754878 GO_REF:0000107 MGI:4422144 NCBI chr 5:8,439,606...8,536,088
Ensembl chr 5:8,446,346...8,533,426
JBrowse link
G CDX1 caudal type homeobox 1 acts_upstream_of_or_within ISO (MGI:2154839|PMID:11784046)
(MGI:2154839|PMID:11784046), (MGI:77274|PMID:7585967)
MGI PMID:7585967 PMID:11784046 MGI:2154839 MGI:77274 NCBI chr 4:58,897,914...58,915,573
Ensembl chr 4:58,897,877...58,915,776
JBrowse link
G CDX2 caudal type homeobox 2 acts_upstream_of_or_within ISO (MGI:4398801|PMID:19853565) MGI PMID:19853565 MGI:4398801 NCBI chr25:11,701,134...11,707,883
Ensembl chr25:11,700,779...11,707,127
JBrowse link
G CDX4 caudal type homeobox 4 acts_upstream_of_or_within ISO (MGI:4398801|PMID:19853565) MGI PMID:19853565 MGI:4398801 NCBI chr  X:57,123,670...57,135,557
Ensembl chr  X:57,123,920...57,135,089
JBrowse link
G CELSR1 cadherin EGF LAG seven-pass G-type receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4429791|PMID:19357712)
(MGI:3835694|PMID:18849982)
Ensembl
MGI
PMID:18849982 PMID:19357712 GO_REF:0000107 MGI:3835694 MGI:4429791 NCBI chr10:19,704,104...19,836,886
Ensembl chr10:19,707,804...19,837,481
JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:1197794|PMID:9501024) MGI PMID:9501024 MGI:1197794 NCBI chr11:35,155,568...35,159,085
Ensembl chr11:35,156,430...35,158,942
JBrowse link
G CRKL CRK like proto-oncogene, adaptor protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3614586|PMID:16399080) Ensembl
MGI
PMID:16399080 GO_REF:0000107 MGI:3614586 NCBI chr26:30,542,276...30,582,479
Ensembl chr26:30,545,311...30,581,964
JBrowse link
G CYP26A1 cytochrome P450 family 26 subfamily A member 1 acts_upstream_of_or_within ISO (MGI:3703483|PMID:17067568) MGI PMID:17067568 MGI:3703483 NCBI chr28:7,423,955...7,432,359
Ensembl chr28:7,428,772...7,432,370
JBrowse link
G CYP26C1 cytochrome P450, family 26, subfamily C, polypeptide 1 acts_upstream_of_or_within ISO (MGI:3703483|PMID:17067568) MGI PMID:17067568 MGI:3703483 NCBI chr28:7,416,022...7,424,173 JBrowse link
G EMX2 empty spiracles homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578670|PMID:15917450)
(MGI:2386059|PMID:12196586)
Ensembl
MGI
PMID:12196586 PMID:15917450 GO_REF:0000107 MGI:2386059 MGI:3578670 NCBI chr28:28,002,966...28,009,955
Ensembl chr28:28,003,710...28,009,035
JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:1344734|PMID:10498685) MGI PMID:10498685 MGI:1344734 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072
JBrowse link
G FOXH1 forkhead box H1 acts_upstream_of_or_within ISO (MGI:1934969|PMID:11358868) MGI PMID:11358868 MGI:1934969 NCBI chr13:37,883,554...37,887,324
Ensembl chr13:37,882,687...37,885,319
JBrowse link
G FUZ fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (MGI:4367921|PMID:19877275) MGI PMID:19877275 MGI:4367921 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699
JBrowse link
G GDF11 growth differentiation factor 11 acts_upstream_of_or_within ISO (MGI:5509072|PMID:23918385)
(MGI:1339513|PMID:10391213)
MGI PMID:10391213 PMID:23918385 MGI:1339513 MGI:5509072 NCBI chr10:142,039...152,537
Ensembl chr10:145,036...148,373
JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5439039|PMID:22841643) Ensembl
MGI
PMID:22841643 GO_REF:0000107 MGI:5439039 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658
JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5439039|PMID:22841643)
(MGI:3053244|PMID:15315762)
Ensembl
MGI
InterPro
PMID:15315762 PMID:22841643 GO_REF:0000002 GO_REF:0000107 MGI:3053244 MGI:5439039 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132
JBrowse link
G GRSF1 G-rich RNA sequence binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578569|PMID:15857914) Ensembl
MGI
PMID:15857914 GO_REF:0000107 MGI:3578569 NCBI chr13:60,088,198...60,102,292
Ensembl chr13:60,089,429...60,100,099
JBrowse link
G HES2 hes family bHLH transcription factor 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:60,275,645...60,279,327
Ensembl chr 5:60,278,043...60,279,181
JBrowse link
G HES3 hes family bHLH transcription factor 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:60,134,351...60,136,924
Ensembl chr 5:60,135,918...60,136,924
JBrowse link
G HES4 hes family bHLH transcription factor 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:56,221,509...56,226,938
Ensembl chr 5:56,225,497...56,226,772
JBrowse link
G HES5 hes family bHLH transcription factor 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:57,387,961...57,389,412
Ensembl chr 5:57,388,674...57,389,388
JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr29:27,185,191...27,188,121
Ensembl chr29:27,185,191...27,188,121
JBrowse link
G HHEX hematopoietically expressed homeobox involved_in ISO (MGI:3777521|PMID:16936074) UniProt PMID:16936074 MGI:3777521 NCBI chr28:7,057,379...7,063,326
Ensembl chr28:7,057,283...7,063,330
JBrowse link
G HIPK1 homeodomain interacting protein kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3619785|PMID:16537918) Ensembl
MGI
PMID:16537918 GO_REF:0000107 MGI:3619785 NCBI chr17:51,732,079...51,783,534
Ensembl chr17:51,732,016...51,781,063
JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3619785|PMID:16537918) Ensembl
MGI
PMID:16537918 GO_REF:0000107 MGI:3619785 NCBI chr16:9,066,957...9,256,916
Ensembl chr16:9,066,970...9,244,526
JBrowse link
G HNF1B HNF1 homeobox B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578600|PMID:15872003) Ensembl
MGI
PMID:15872003 GO_REF:0000107 MGI:3578600 NCBI chr 9:37,437,992...37,493,200
Ensembl chr 9:37,438,583...37,492,993
JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (MGI:3055618|PMID:15367676)
(MGI:1346308|PMID:10529420)
MGI PMID:10529420 PMID:15367676 MGI:1346308 MGI:3055618 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681
JBrowse link
G HOXA10 homeobox A10 acts_upstream_of_or_within ISO (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr14:40,346,462...40,348,900
Ensembl chr14:40,346,462...40,354,396
JBrowse link
G HOXA11 homeobox A11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2667742|PMID:12869760) Ensembl
MGI
PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr14:40,355,907...40,360,120
Ensembl chr14:40,357,478...40,359,919
JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1098901|PMID:9367425) Ensembl
MGI
PMID:9367425 GO_REF:0000107 MGI:1098901 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239
JBrowse link
G HOXA3 homeobox A3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:67616|PMID:7913519)
(MGI:1195045|PMID:9441667)
GO_Central
MGI
PMID:7913519 PMID:9441667 PMID:21873635 MGI:1195045 MGI:67616 NCBI chr14:40,280,866...40,326,559
Ensembl chr14:40,280,861...40,296,147
JBrowse link
G HOXA4 homeobox A4 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:74948|PMID:7628700)
(MGI:67413|PMID:7918106)
GO_Central
MGI
PMID:7628700 PMID:7918106 PMID:21873635 MGI:67413 MGI:74948 NCBI chr14:40,302,106...40,304,437
Ensembl chr14:40,302,816...40,304,321
JBrowse link
G HOXA5 homeobox A5 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1203259|PMID:9603431), (MGI:63693|PMID:7901120)
(MGI:3723390|PMID:17417799)
(MGI:3720535|PMID:17626057)
GO_Central
MGI
PMID:7901120 PMID:9603431 PMID:17417799 PMID:17626057 PMID:21873635 MGI:1203259 MGI:3720535 MGI:3723390 MGI:63693 NCBI chr14:40,315,409...40,319,001
Ensembl chr14:40,315,639...40,317,768
JBrowse link
G HOXA6 homeobox A6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:40,319,505...40,321,838
Ensembl chr14:40,319,706...40,321,800
JBrowse link
G HOXA7 homeobox A7 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3720535|PMID:17626057)
(MGI:67413|PMID:7918106)
GO_Central
MGI
PMID:7918106 PMID:17626057 PMID:21873635 MGI:3720535 MGI:67413 NCBI chr14:40,327,918...40,334,073
Ensembl chr14:40,329,127...40,330,842
JBrowse link
G HOXA9 homeobox A9 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:78984|PMID:8625797)
(MGI:85243|PMID:9013929)
(MGI:3720535|PMID:17626057)
GO_Central
MGI
PMID:8625797 PMID:9013929 PMID:17626057 PMID:21873635 MGI:3720535 MGI:78984 MGI:85243 NCBI chr14:40,336,829...40,340,533
Ensembl chr14:40,337,999...40,339,923
JBrowse link
G HOXB1 homeobox B1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1346308|PMID:10529420)
(MGI:1859107|PMID:10885747)
Ensembl
MGI
PMID:10529420 PMID:10885747 GO_REF:0000107 MGI:1346308 MGI:1859107 NCBI chr 9:24,791,848...24,795,443
Ensembl chr 9:24,792,889...24,794,302
JBrowse link
G HOXB2 homeobox B2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:85074|PMID:9012503)
(MGI:1859107|PMID:10885747)
Ensembl
MGI
PMID:9012503 PMID:10885747 GO_REF:0000107 MGI:1859107 MGI:85074 NCBI chr 9:24,803,996...24,810,109
Ensembl chr 9:24,804,426...24,806,614
JBrowse link
G HOXB3 homeobox B3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1859107|PMID:10885747)
(MGI:1195045|PMID:9441667)
GO_Central
MGI
PMID:9441667 PMID:10885747 PMID:21873635 MGI:1195045 MGI:1859107 NCBI chr 9:24,810,299...24,837,434
Ensembl chr 9:24,809,739...24,836,058
JBrowse link
G HOXB4 homeobox B4 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:85074|PMID:9012503)
(MGI:74948|PMID:7628700)
(MGI:1859107|PMID:10885747)
GO_Central
MGI
Ensembl
PMID:7628700 PMID:9012503 PMID:10885747 PMID:21873635 GO_REF:0000107 MGI:1859107 MGI:74948 MGI:85074 NCBI chr 9:24,837,572...24,848,600
Ensembl chr 9:24,837,914...24,840,648
JBrowse link
G HOXB5 homeobox B5 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:70296|PMID:7828847)
(MGI:3720535|PMID:17626057)
(MGI:1859107|PMID:10885747)
GO_Central
MGI
PMID:7828847 PMID:10885747 PMID:17626057 PMID:21873635 MGI:1859107 MGI:3720535 MGI:70296 NCBI chr 9:24,853,759...24,856,478
Ensembl chr 9:24,853,759...24,856,437
JBrowse link
G HOXB6 homeobox B6 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1859107|PMID:10885747)
(MGI:70296|PMID:7828847)
(MGI:3720535|PMID:17626057)
GO_Central
MGI
PMID:7828847 PMID:10885747 PMID:17626057 PMID:21873635 MGI:1859107 MGI:3720535 MGI:70296 NCBI chr 9:24,858,416...24,862,360
Ensembl chr 9:24,859,054...24,860,774
JBrowse link
G HOXB7 homeobox B7 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1313067|PMID:9784603)
(MGI:1859107|PMID:10885747)
GO_Central
MGI
PMID:9784603 PMID:10885747 PMID:21873635 MGI:1313067 MGI:1859107 NCBI chr 9:24,870,037...24,874,517
Ensembl chr 9:24,870,612...24,873,453
JBrowse link
G HOXB8 homeobox B8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2681074|PMID:14623233)
(MGI:1859107|PMID:10885747)
(MGI:1349283|PMID:10559485), (MGI:1933164|PMID:11311170)
(MGI:1933164|PMID:11311170)
Ensembl
MGI
PMID:10559485 PMID:10885747 PMID:11311170 PMID:14623233 GO_REF:0000107 MGI:1349283 MGI:1859107 MGI:1933164 MGI:2681074 NCBI chr 9:24,874,893...24,888,981
Ensembl chr 9:24,874,899...24,877,504
JBrowse link
G HOXB9 homeobox B9 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1859107|PMID:10885747)
(MGI:85243|PMID:9013929)
(MGI:3720535|PMID:17626057)
GO_Central
MGI
PMID:9013929 PMID:10885747 PMID:17626057 PMID:21873635 MGI:1859107 MGI:3720535 MGI:85243 NCBI chr 9:24,884,101...24,889,904
Ensembl chr 9:24,872,950...24,889,376
JBrowse link
G HOXC10 homeobox C10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2667742|PMID:12869760) Ensembl
MGI
PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr27:1,272,272...1,277,411
Ensembl chr27:1,273,131...1,323,370
JBrowse link
G HOXC11 homeobox C11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2667742|PMID:12869760) Ensembl
MGI
PMID:12869760 GO_REF:0000107 MGI:2667742 NCBI chr27:1,287,326...1,289,577
Ensembl chr27:1,287,380...1,289,372
JBrowse link
G HOXC13 homeobox C13 acts_upstream_of_or_within ISO (MGI:1195385|PMID:9420327) MGI PMID:9420327 MGI:1195385 NCBI chr27:1,315,532...1,323,470
Ensembl chr27:1,273,131...1,323,370
JBrowse link
G HOXC4 homeobox C4 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:81673|PMID:8660891)
(MGI:79121|PMID:8626021)
GO_Central
MGI
Ensembl
PMID:8626021 PMID:8660891 PMID:21873635 GO_REF:0000107 MGI:79121 MGI:81673 NCBI chr27:1,209,510...1,246,873
Ensembl chr27:1,172,229...1,226,572
JBrowse link
G HOXC5 homeobox C5 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3720535|PMID:17626057)
GO_Central
MGI
PMID:17626057 PMID:21873635 MGI:3720535 NCBI chr27:1,227,739...1,232,802
Ensembl chr27:1,229,600...1,231,359
JBrowse link
G HOXC6 homeobox C6 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3720535|PMID:17626057)
GO_Central
MGI
PMID:17626057 PMID:21873635 MGI:3720535 NCBI chr27:1,233,749...1,246,874
Ensembl chr27:1,234,689...1,236,137
JBrowse link
G HOXC8 homeobox C8 acts_upstream_of_or_within ISO (MGI:1933164|PMID:11311170) MGI PMID:11311170 MGI:1933164 NCBI chr27:1,251,314...1,262,809 JBrowse link
G HOXC8 homeobox C8 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr27:1,252,730...1,254,876 JBrowse link
G HOXC9 homeobox C9 acts_upstream_of_or_within ISO (MGI:73980|PMID:7547473)
(MGI:3720535|PMID:17626057)
MGI PMID:7547473 PMID:17626057 MGI:3720535 MGI:73980
G HOXD10 homeobox D10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1350864|PMID:10642795)
(MGI:2667742|PMID:12869760)
Ensembl
MGI
PMID:10642795 PMID:12869760 GO_REF:0000107 MGI:1350864 MGI:2667742 NCBI chr36:19,924,352...19,927,706
Ensembl chr36:19,916,175...19,927,724
JBrowse link
G HOXD11 homeobox D11 acts_upstream_of_or_within ISO (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chr36:19,913,064...19,926,868
Ensembl chr36:19,914,431...19,916,766
JBrowse link
G HOXD13 homeobox D13 acts_upstream_of_or_within ISO (MGI:63627|PMID:8106170) MGI PMID:8106170 MGI:63627 NCBI chr36:19,901,184...19,903,837 JBrowse link
G HOXD3 homeobox D3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1195045|PMID:9441667)
(MGI:67616|PMID:7913519)
(MGI:63793|PMID:7910549), (MGI:67616|PMID:7913519)
GO_Central
MGI
PMID:7910549 PMID:7913519 PMID:9441667 PMID:21873635 MGI:1195045 MGI:63793 MGI:67616 NCBI chr36:19,961,393...19,981,672
Ensembl chr36:19,960,761...19,980,525
JBrowse link
G HOXD4 homeobox D4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr36:19,960,161...19,961,371 JBrowse link
G HOXD4 homeobox D4 acts_upstream_of_or_within ISO (MGI:74948|PMID:7628700)
(MGI:72992|PMID:7750651)
MGI PMID:7628700 PMID:7750651 MGI:72992 MGI:74948
G HOXD8 homeobox D8 acts_upstream_of_or_within ISO (MGI:1933164|PMID:11311170) MGI PMID:11311170 MGI:1933164 NCBI chr36:19,938,916...19,941,092 JBrowse link
G HOXD9 homeobox D9 acts_upstream_of_or_within ISO (MGI:3720535|PMID:17626057)
(MGI:78984|PMID:8625797)
(MGI:1350864|PMID:10642795)
MGI PMID:8625797 PMID:10642795 PMID:17626057 MGI:1350864 MGI:3720535 MGI:78984 NCBI chr36:19,929,479...19,932,861 JBrowse link
G HTT huntingtin acts_upstream_of_or_within ISO (MGI:3609520|PMID:16109169) MGI PMID:16109169 MGI:3609520 NCBI chr 3:61,076,934...61,221,462
Ensembl chr 3:61,079,904...61,330,290
JBrowse link
G IFT88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:2660994|PMID:12701101)
(MGI:3579954|PMID:15930098)
MGI PMID:12701101 PMID:15930098 MGI:2660994 MGI:3579954 NCBI chr25:17,414,965...17,551,405
Ensembl chr25:17,414,965...17,551,266
JBrowse link
G KIF3A kinesin family member 3A acts_upstream_of_or_within ISO (MGI:1336552|PMID:10220415) MGI PMID:10220415 MGI:1336552 NCBI chr11:20,988,516...21,044,151
Ensembl chr11:20,928,655...21,044,090
JBrowse link
G KMT2A lysine methyltransferase 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3530206|PMID:15741318)
(MGI:3625774|PMID:16618927)
Ensembl
MGI
PMID:15741318 PMID:16618927 GO_REF:0000107 MGI:3530206 MGI:3625774 NCBI chr 5:15,212,559...15,302,825
Ensembl chr 5:15,217,348...15,270,971
JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:1344734|PMID:10498685) UniProt
MGI
PMID:10498685 GO_REF:0000024 MGI:1344734 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G LOC483397 interferon-induced transmembrane protein 1 acts_upstream_of_or_within ISO (MGI:3578569|PMID:15857914) MGI PMID:15857914 MGI:3578569 NCBI chr18:25,494,018...25,495,114 JBrowse link
G LOC609557 cryptic protein involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2136711|PMID:11412024)
GO_Central
MGI
PMID:11412024 PMID:21873635 MGI:2136711 NCBI chr19:20,318,937...20,384,369 JBrowse link
G LRP5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3045836|PMID:15142971)
GO_Central
MGI
PMID:15142971 PMID:21873635 MGI:3045836 NCBI chr18:49,439,494...49,555,375
Ensembl chr18:49,439,483...49,516,396
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3045836|PMID:15142971)
(MGI:4413372|PMID:19795512)
(MGI:3603992|PMID:16126904)
MGI PMID:15142971 PMID:16126904 PMID:19795512 MGI:3045836 MGI:3603992 MGI:4413372 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G MLLT3 MLLT3 super elongation complex subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2387913|PMID:12242306) Ensembl
MGI
PMID:12242306 GO_REF:0000107 MGI:2387913 NCBI chr11:39,923,165...40,203,574
Ensembl chr11:39,927,517...40,203,281
JBrowse link
G MSX1 msh homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4948979|PMID:21465616) Ensembl
MGI
PMID:21465616 GO_REF:0000107 MGI:4948979 NCBI chr 3:70,232,790...70,236,295
Ensembl chr 3:70,232,052...70,236,447
JBrowse link
G MSX2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chr 4:38,002,724...38,007,407
Ensembl chr 4:38,002,428...38,007,407
JBrowse link
G NEUROD1 neuronal differentiation 1 acts_upstream_of_or_within ISO (MGI:3613103|PMID:16368089) MGI PMID:16368089 MGI:3613103 NCBI chr36:24,853,591...24,857,886 JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2136068|PMID:11418863), (MGI:3042338|PMID:15004567)
(MGI:2155575|PMID:11311163)
(MGI:3056019|PMID:15302604)
(MGI:3624254|PMID:16496285)
MGI PMID:11311163 PMID:11418863 PMID:15004567 PMID:15302604 PMID:16496285 MGI:2136068 MGI:2155575 MGI:3042338 MGI:3056019 MGI:3624254 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
G NR2F2 nuclear receptor subfamily 2 group F member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578605|PMID:15829524) Ensembl
MGI
PMID:15829524 GO_REF:0000107 MGI:3578605 NCBI chr 3:44,135,143...44,148,836
Ensembl chr 3:44,136,463...44,148,524
JBrowse link
G OTX1 orthodenticle homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3039992|PMID:15105370) Ensembl
MGI
PMID:15105370 GO_REF:0000107 MGI:3039992 NCBI chr10:62,830,515...62,836,449
Ensembl chr10:62,830,187...62,837,172
JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (MGI:2136711|PMID:11412024)
(MGI:1197794|PMID:9501024)
(MGI:2656991|PMID:12652306)
MGI PMID:9501024 PMID:11412024 PMID:12652306 MGI:1197794 MGI:2136711 MGI:2656991 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446
JBrowse link
G PAX6 paired box 6 acts_upstream_of_or_within ISO (MGI:2386059|PMID:12196586)
(MGI:3578670|PMID:15917450)
MGI PMID:12196586 PMID:15917450 MGI:2386059 MGI:3578670
G PBX1 PBX homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2151355|PMID:11566859) Ensembl
MGI
PMID:11566859 GO_REF:0000107 MGI:2151355 NCBI chr38:18,378,997...18,703,694
Ensembl chr38:18,418,093...18,703,497
JBrowse link
G PCGF2 polycomb group ring finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:80640|PMID:8625838)
(MGI:3530206|PMID:15741318)
Ensembl
MGI
PMID:8625838 PMID:15741318 GO_REF:0000107 MGI:3530206 MGI:80640 NCBI chr 9:23,488,862...23,499,769
Ensembl chr 9:23,488,857...23,499,549
JBrowse link
G PCSK5 proprotein convertase subtilisin/kexin type 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:82,088,090...82,506,131
Ensembl chr 1:82,090,664...82,555,145
JBrowse link
G PDS5A PDS5 cohesin associated factor A acts_upstream_of_or_within ISO (MGI:3847057|PMID:19412548) MGI PMID:19412548 MGI:3847057 NCBI chr 3:72,521,839...72,673,164
Ensembl chr 3:72,521,868...72,673,164
JBrowse link
G RARG retinoic acid receptor gamma involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2154839|PMID:11784046)
(MGI:2154839|PMID:11784046), (MGI:60925|PMID:8388780)
Ensembl
MGI
PMID:8388780 PMID:11784046 GO_REF:0000107 MGI:2154839 MGI:60925 NCBI chr27:1,958,432...1,978,471
Ensembl chr27:1,958,204...1,978,476
JBrowse link
G RING1 ring finger protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3628673|PMID:16624538)
(MGI:1926247|PMID:11060235), (MGI:3628673|PMID:16624538)
Ensembl
MGI
PMID:11060235 PMID:16624538 GO_REF:0000107 MGI:1926247 MGI:3628673 NCBI chr12:2,671,578...2,675,488
Ensembl chr12:2,671,578...2,675,488
JBrowse link
G SCMH1 Scm polycomb group protein homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3703453|PMID:17215307) Ensembl
MGI
PMID:17215307 GO_REF:0000107 MGI:3703453 NCBI chr15:1,917,503...2,056,325
Ensembl chr15:1,917,509...2,058,904
JBrowse link
G SF3B1 splicing factor 3b subunit 1 acts_upstream_of_or_within ISO (MGI:3530206|PMID:15741318) MGI PMID:15741318 MGI:3530206 NCBI chr37:6,922,150...6,962,474
Ensembl chr37:6,924,047...6,962,896
JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:3618960|PMID:16467359) MGI PMID:16467359 MGI:3618960 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3618960|PMID:16467359) MGI PMID:16467359 MGI:3618960 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
G SHH sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:1928592|PMID:11118883)
(MGI:2135419|PMID:11389830)
MGI PMID:11118883 PMID:11389830 MGI:1928592 MGI:2135419 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G SMAD2 SMAD family member 2 acts_upstream_of_or_within ISO (MGI:2667288|PMID:12842913)
(MGI:1201281|PMID:9529255), (MGI:2136068|PMID:11418863)
MGI PMID:9529255 PMID:11418863 PMID:12842913 MGI:1201281 MGI:2136068 MGI:2667288 NCBI chr 7:43,696,883...43,778,063
Ensembl chr 7:43,700,445...43,769,983
JBrowse link
G SMAD4 SMAD family member 4 acts_upstream_of_or_within ISO (MGI:3051711|PMID:15215210) MGI PMID:15215210 MGI:3051711 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405
JBrowse link
G SMO smoothened, frizzled class receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5438143|PMID:22987639) Ensembl
MGI
PMID:22987639 GO_REF:0000107 MGI:5438143 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
G TBX1 T-box transcription factor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:3614586|PMID:16399080)
(MGI:3039048|PMID:15084464)
UniProt
MGI
PMID:15084464 PMID:16399080 GO_REF:0000024 MGI:3039048 MGI:3614586 NCBI chr26:29,529,071...29,533,240
Ensembl chr26:29,528,878...29,532,784
JBrowse link
G TBXT T-box transcription factor T acts_upstream_of_or_within ISO (MGI:3056222|PMID:15384171) MGI PMID:15384171 MGI:3056222 NCBI chr 1:54,183,495...54,192,331
Ensembl chr 1:54,183,153...54,192,352
JBrowse link
G TCF15 transcription factor 15 acts_upstream_of_or_within ISO (MGI:84545|PMID:8955271) MGI PMID:8955271 MGI:84545 NCBI chr24:20,274,113...20,281,081
Ensembl chr24:20,274,050...20,280,270
JBrowse link
G TGFBR1 transforming growth factor beta receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3695190|PMID:16845371) Ensembl
MGI
PMID:16845371 GO_REF:0000107 MGI:3695190 NCBI chr11:56,191,383...56,223,042
Ensembl chr11:56,161,772...56,218,594
JBrowse link
G TSHZ1 teashirt zinc finger homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3720547|PMID:17586487) Ensembl
MGI
PMID:17586487 GO_REF:0000107 MGI:3720547 NCBI chr 1:4,224,875...4,229,755
Ensembl chr 1:4,226,210...4,246,762
JBrowse link
G TULP3 TUB like protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3844764|PMID:19334287) Ensembl
MGI
PMID:19334287 GO_REF:0000107 MGI:3844764 NCBI chr27:41,819,574...41,884,198
Ensembl chr27:41,819,455...41,884,097
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3835694|PMID:18849982) MGI PMID:18849982 MGI:3835694 NCBI chr38:21,822,873...21,824,537 JBrowse link
G WNT3 Wnt family member 3 acts_upstream_of_or_within ISO (MGI:1341483|PMID:10431240) MGI PMID:10431240 MGI:1341483 NCBI chr 9:10,073,019...10,124,454
Ensembl chr 9:10,077,567...10,124,508
JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3044441|PMID:15148409) MGI PMID:15148409 MGI:3044441 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
G WNT5A Wnt family member 5A acts_upstream_of_or_within ISO (MGI:3039991|PMID:15073149), (MGI:4413372|PMID:19795512) MGI PMID:15073149 PMID:19795512 MGI:3039991 MGI:4413372 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
G YY1 YY1 transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3628673|PMID:16624538) Ensembl
MGI
PMID:16624538 GO_REF:0000107 MGI:3628673 NCBI chr 8:68,539,511...68,572,796
Ensembl chr 8:68,539,353...68,568,058
JBrowse link
G ZBTB16 zinc finger and BTB domain containing 16 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1859075|PMID:10835630) Ensembl
MGI
PMID:10835630 GO_REF:0000107 MGI:1859075 NCBI chr 5:19,082,594...19,284,360
Ensembl chr 5:19,087,154...19,267,628
JBrowse link
G ZIC3 Zic family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3624254|PMID:16496285) Ensembl
MGI
PMID:16496285 GO_REF:0000107 MGI:3624254 NCBI chr  X:107,822,002...107,833,582
Ensembl chr  X:107,821,948...107,833,597
JBrowse link
anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AURKA aurora kinase A acts_upstream_of_or_within ISO (MGI:5449118|PMID:22939930) MGI PMID:22939930 MGI:5449118 NCBI chr24:41,585,483...41,604,875
Ensembl chr24:41,585,518...41,604,791
JBrowse link
G BMP4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1889107|PMID:10964473) Ensembl
MGI
PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
G CDX1 caudal type homeobox 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:58,897,914...58,915,573
Ensembl chr 4:58,897,877...58,915,776
JBrowse link
G CDX2 caudal type homeobox 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:11,701,134...11,707,883
Ensembl chr25:11,700,779...11,707,127
JBrowse link
G CDX4 caudal type homeobox 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:57,123,670...57,135,557
Ensembl chr  X:57,123,920...57,135,089
JBrowse link
G CER1 cerberus 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3042338|PMID:15004567)
(MGI:3776330|PMID:18241853)
Ensembl
MGI
PMID:15004567 PMID:18241853 GO_REF:0000107 MGI:3042338 MGI:3776330 NCBI chr11:35,155,568...35,159,085
Ensembl chr11:35,156,430...35,158,942
JBrowse link
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1353237|PMID:10662781) Ensembl
MGI
PMID:10662781 GO_REF:0000107 MGI:1353237 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G DDIT3 DNA damage inducible transcript 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:1,606,693...1,612,410
Ensembl chr10:1,606,693...1,611,303
JBrowse link
G GPC3 glypican 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1889107|PMID:10964473) Ensembl
MGI
PMID:10964473 GO_REF:0000107 MGI:1889107 NCBI chr  X:104,313,426...104,751,215
Ensembl chr  X:104,313,591...104,751,756
JBrowse link
G HEY1 hes related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO (MGI:3530185|PMID:15680351) MGI PMID:15680351 MGI:3530185 NCBI chr29:27,185,191...27,188,121
Ensembl chr29:27,185,191...27,188,121
JBrowse link
G HEY2 hes related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO (MGI:3530185|PMID:15680351) MGI PMID:15680351 MGI:3530185 NCBI chr 1:64,630,656...64,646,546 JBrowse link
G LDB1 LIM domain binding 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2448170|PMID:12490556) Ensembl
MGI
PMID:12490556 GO_REF:0000107 MGI:2448170 NCBI chr28:14,646,409...14,658,324
Ensembl chr28:14,646,056...14,658,548
JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:1346311|PMID:10529425) UniProt
MGI
PMID:10529425 GO_REF:0000024 MGI:1346311 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2155575|PMID:11311163) MGI PMID:11311163 MGI:2155575 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
G PGAP1 post-GPI attachment to proteins inositol deacylase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1346311|PMID:10529425) Ensembl
MGI
PMID:10529425 GO_REF:0000107 MGI:1346311 NCBI chr37:6,430,344...6,499,310
Ensembl chr37:6,431,476...6,499,359
JBrowse link
G RNF2 ring finger protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2389282|PMID:12183370) Ensembl
MGI
PMID:12183370 GO_REF:0000107 MGI:2389282 NCBI chr 7:18,240,672...18,283,091
Ensembl chr 7:18,236,115...18,281,387
JBrowse link
G SIX2 SIX homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:47,399,152...47,403,503
Ensembl chr10:47,400,034...47,403,509
JBrowse link
G SKI SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:2176418|PMID:11731796) MGI PMID:11731796 MGI:2176418 NCBI chr 5:57,144,178...57,216,385
Ensembl chr 5:57,145,825...57,214,403
JBrowse link
G TBX18 T-box transcription factor 18 acts_upstream_of_or_within ISO (MGI:3044041|PMID:15155583) MGI PMID:15155583 MGI:3044041 NCBI chr12:44,901,076...44,929,730
Ensembl chr12:44,873,119...44,929,205
JBrowse link
G TDGF1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO (MGI:3776330|PMID:18241853) MGI PMID:18241853 MGI:3776330 NCBI chr20:42,137,939...42,140,590 JBrowse link
G WLS Wnt ligand secretion mediator involved_in ISO (MGI:4397730|PMID:19841259) UniProt PMID:19841259 MGI:4397730 NCBI chr 6:77,053,242...77,146,549
Ensembl chr 6:77,053,237...77,317,761
JBrowse link
G WNT3 Wnt family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3771246|PMID:18028899) Ensembl
MGI
PMID:18028899 GO_REF:0000107 MGI:3771246 NCBI chr 9:10,073,019...10,124,454
Ensembl chr 9:10,077,567...10,124,508
JBrowse link
anterior/posterior axis specification, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FRS2 fibroblast growth factor receptor substrate 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3580203|PMID:15870281) Ensembl
MGI
PMID:15870281 GO_REF:0000107 MGI:3580203 NCBI chr10:11,445,843...11,552,325
Ensembl chr10:11,539,994...11,552,890
JBrowse link
G FZD5 frizzled class receptor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:16,123,788...16,126,634
Ensembl chr37:16,123,798...16,125,567
JBrowse link
G TASOR transcription activation suppressor involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:33,665,231...33,713,264
Ensembl chr20:33,646,000...33,712,936
JBrowse link
G TBX3 T-box transcription factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:11,694,885...11,709,594
Ensembl chr26:11,696,565...11,708,918
JBrowse link
G TCF7L1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (MGI:3043490|PMID:14668413) MGI PMID:14668413 MGI:3043490 NCBI chr17:39,699,958...39,859,167
Ensembl chr17:39,699,958...39,858,182
JBrowse link
G TDGF1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO (MGI:1303194|PMID:9790191) MGI PMID:9790191 MGI:1303194 NCBI chr20:42,137,939...42,140,590 JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1891551|PMID:11029008)
GO_Central
MGI
PMID:11029008 PMID:21873635 MGI:1891551 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G MED12 mediator complex subunit 12 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4839483|PMID:20630950) Ensembl
MGI
PMID:20630950 GO_REF:0000107 MGI:4839483 NCBI chr  X:55,487,629...55,508,941
Ensembl chr  X:55,482,013...55,509,992
JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1891551|PMID:11029008) Ensembl
MGI
PMID:11029008 GO_REF:0000107 MGI:1891551 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
compartment pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLL1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2181244|PMID:12001066) Ensembl
MGI
PMID:12001066 GO_REF:0000107 MGI:2181244 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348
JBrowse link
G DLL3 delta like canonical Notch ligand 3 acts_upstream_of_or_within ISO (MGI:2181244|PMID:12001066) MGI PMID:12001066 MGI:2181244 NCBI chr 1:113,737,662...113,745,936 JBrowse link
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2181244|PMID:12001066) Ensembl
MGI
PMID:12001066 GO_REF:0000107 MGI:2181244 NCBI chr 6:14,631,638...14,640,147
Ensembl chr 6:14,632,691...14,635,485
JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2181244|PMID:12001066) Ensembl
MGI
PMID:12001066 GO_REF:0000107 MGI:2181244 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
embryonic heart tube anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611958|PMID:16314491) Ensembl
MGI
PMID:16314491 GO_REF:0000107 MGI:3611958 NCBI chr24:15,199,667...15,211,509
Ensembl chr24:15,200,291...15,212,217
JBrowse link
G FOXH1 forkhead box H1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3055632|PMID:15363409) Ensembl
MGI
PMID:15363409 GO_REF:0000107 MGI:3055632 NCBI chr13:37,883,554...37,887,324
Ensembl chr13:37,882,687...37,885,319
JBrowse link
G GATA4 GATA binding protein 4 acts_upstream_of_or_within ISO (MGI:87488|PMID:9136932) MGI PMID:9136932 MGI:87488 NCBI chr25:26,126,172...26,211,474
Ensembl chr25:26,127,853...26,182,989
JBrowse link
epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2677178|PMID:14511481) Ensembl
MGI
PMID:14511481 GO_REF:0000107 MGI:2677178 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOG noggin involved_in ISO (PMID:8582276) BHF-UCL PMID:8582276 NCBI chr 9:31,453,604...31,456,060 JBrowse link
forebrain anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FEZF1 FEZ family zinc finger 1 acts_upstream_of_or_within ISO (MGI:3702790|PMID:16971467) MGI PMID:16971467 MGI:3702790
G FEZF2 FEZ family zinc finger 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3702790|PMID:16971467) Ensembl
MGI
PMID:16971467 GO_REF:0000107 MGI:3702790 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282
JBrowse link
G SIX3 SIX homeobox 3 acts_upstream_of_or_within ISO (MGI:3772426|PMID:18094027) MGI PMID:18094027 MGI:3772426 NCBI chr10:47,332,875...47,369,359
Ensembl chr10:47,332,888...47,343,635
JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:3772426|PMID:18094027) MGI PMID:18094027 MGI:3772426 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
forebrain-midbrain boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAX6 paired box 6 acts_upstream_of_or_within ISO (MGI:892757|PMID:9169845) MGI PMID:9169845 MGI:892757
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689)
(MGI:4361775|PMID:19805295)
Ensembl
MGI
PMID:19686689 PMID:19805295 GO_REF:0000107 MGI:4360856 MGI:4361775 NCBI chr23:10,559,722...10,572,933
Ensembl chr23:10,559,718...10,572,927
JBrowse link
G WNT2 Wnt family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr14:56,123,735...56,172,113
Ensembl chr14:56,129,248...56,172,069
JBrowse link
G WNT2B Wnt family member 2B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4360856|PMID:19686689) Ensembl
MGI
PMID:19686689 GO_REF:0000107 MGI:4360856 NCBI chr17:63,034,719...63,054,369
Ensembl chr17:63,035,883...63,047,956
JBrowse link
midbrain-hindbrain boundary development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EN1 engrailed homeobox 1 acts_upstream_of_or_within ISO (MGI:3525936|PMID:15607945) MGI PMID:15607945 MGI:3525936 NCBI chr19:31,124,325...31,129,538 JBrowse link
G FGF8 fibroblast growth factor 8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3720541|PMID:17601531) Ensembl
MGI
PMID:17601531 GO_REF:0000107 MGI:3720541 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468
JBrowse link
G GBX2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (MGI:3624192|PMID:16651541) MGI PMID:16651541 MGI:3624192 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512
JBrowse link
G LRP6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1891551|PMID:11029008), (MGI:4413372|PMID:19795512)
GO_Central
MGI
PMID:11029008 PMID:19795512 PMID:21873635 MGI:1891551 MGI:4413372 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G WNT1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:59176|PMID:2205396) MGI PMID:2205396 MGI:59176 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SSBP3 single stranded DNA binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:54,690,632...54,826,691
Ensembl chr 5:54,662,840...54,824,960
JBrowse link
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:76584|PMID:8555108) MGI PMID:8555108 MGI:76584 NCBI chr27:5,588,151...5,592,254
Ensembl chr27:5,574,940...5,592,060
JBrowse link
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3624192|PMID:16651541) Ensembl
MGI
PMID:16651541 GO_REF:0000107 MGI:3624192 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512
JBrowse link
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:2149154|PMID:11500373) MGI PMID:11500373 MGI:2149154
G HES3 hes family bHLH transcription factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2149134|PMID:11522634) Ensembl
MGI
PMID:11522634 GO_REF:0000107 MGI:2149134 NCBI chr 5:60,134,351...60,136,924
Ensembl chr 5:60,135,918...60,136,924
JBrowse link
G KDM2B lysine demethylase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:7,625,857...7,746,049
Ensembl chr26:7,598,931...7,745,113
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX18 T-box transcription factor 18 involved_in ISO (MGI:3722519|PMID:17584735) BHF-UCL PMID:17584735 MGI:3722519 NCBI chr12:44,901,076...44,929,730
Ensembl chr12:44,873,119...44,929,205
JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FUZ fuzzy planar cell polarity protein involved_in ISO (MGI:5498583|PMID:23806618) UniProt PMID:23806618 MGI:5498583 NCBI chr 1:106,742,381...106,752,543
Ensembl chr 1:106,747,860...106,805,699
JBrowse link
G OFD1 OFD1 centriole and centriolar satellite protein involved_in ISO (MGI:5498583|PMID:23806618) UniProt PMID:23806618 MGI:5498583 NCBI chr  X:10,140,439...10,194,478
Ensembl chr  X:10,140,067...10,194,472
JBrowse link
negative regulation of Notch signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:14,631,638...14,640,147
Ensembl chr 6:14,632,691...14,635,485
JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5317364|PMID:21795391) Ensembl
MGI
PMID:21795391 GO_REF:0000107 MGI:5317364 NCBI chr 9:48,394,568...48,396,849
Ensembl chr 9:48,394,754...48,395,098
JBrowse link
neural plate anterior/posterior regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR2 cadherin EGF LAG seven-pass G-type receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:42,547,638...42,573,407
Ensembl chr 6:42,548,983...42,573,962
JBrowse link
P granule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLD6 phospholipase D family member 6 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 5:42,208,594...42,212,403
Ensembl chr 5:42,208,609...42,210,796
JBrowse link
G TDRD5 tudor domain containing 5 involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:20,259,940...20,348,014
Ensembl chr 7:20,261,630...20,348,650
JBrowse link
polarity specification of anterior/posterior axis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
G WNT8A Wnt family member 8A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3609071|PMID:16256739) Ensembl
MGI
PMID:16256739 GO_REF:0000107 MGI:3609071 NCBI chr11:25,707,058...25,752,724
Ensembl chr11:25,744,780...25,749,748
JBrowse link
primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ETS2 ETS proto-oncogene 2, transcription factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5546318|PMID:23552073) Ensembl
MGI
PMID:23552073 GO_REF:0000107 MGI:5546318 NCBI chr31:33,846,821...33,861,394
Ensembl chr31:33,839,010...33,860,330
JBrowse link
G FOXA2 forkhead box A2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2157654|PMID:11291865) UniProt
MGI
PMID:11291865 GO_REF:0000024 MGI:2157654 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072
JBrowse link
G GDF3 growth differentiation factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611720|PMID:16368929) Ensembl
MGI
PMID:16368929 GO_REF:0000107 MGI:3611720 NCBI chr27:37,125,845...37,129,567
Ensembl chr27:37,125,928...37,129,484
JBrowse link
G HHEX hematopoietically expressed homeobox acts_upstream_of_or_within ISO (MGI:4950786|PMID:21445260) MGI PMID:21445260 MGI:4950786 NCBI chr28:7,057,379...7,063,326
Ensembl chr28:7,057,283...7,063,330
JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2157654|PMID:11291865) UniProt
MGI
PMID:11291865 GO_REF:0000024 MGI:2157654 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G LRP6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4413372|PMID:19795512)
GO_Central
MGI
PMID:19795512 PMID:21873635 MGI:4413372 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:4950786|PMID:21445260) MGI PMID:21445260 MGI:4950786 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2157654|PMID:11291865) UniProt
MGI
PMID:11291865 GO_REF:0000024 MGI:2157654 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446
JBrowse link
G SRF serum response factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1312998|PMID:9799237) Ensembl
MGI
PMID:9799237 GO_REF:0000107 MGI:1312998 NCBI chr12:11,664,441...11,673,846
Ensembl chr12:11,664,527...11,671,533
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4413372|PMID:19795512) Ensembl
MGI
PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
regulation of cell migration involved in somitogenic axis elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP2R3A protein phosphatase 2 regulatory subunit B''alpha involved_in ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chr23:32,441,130...32,628,588
Ensembl chr23:32,471,921...32,626,548
JBrowse link
regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NOG noggin involved_in ISO (PMID:8582276) BHF-UCL PMID:8582276 NCBI chr 9:31,453,604...31,456,060 JBrowse link
regulation of somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDX1 caudal type homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:58,897,914...58,915,573
Ensembl chr 4:58,897,877...58,915,776
JBrowse link
G CDX2 caudal type homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:11,701,134...11,707,883
Ensembl chr25:11,700,779...11,707,127
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348
JBrowse link
G DMRT2 doublesex and mab-3 related transcription factor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3820487|PMID:17974128) Ensembl
MGI
PMID:17974128 GO_REF:0000107 MGI:3820487 NCBI chr 1:89,873,380...89,880,944
Ensembl chr 1:89,875,670...89,880,641
JBrowse link
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367298|PMID:19779553) Ensembl
MGI
PMID:19779553 GO_REF:0000107 MGI:4367298 NCBI chr 6:14,631,638...14,640,147
Ensembl chr 6:14,632,691...14,635,485
JBrowse link
G NOTCH1 notch receptor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:72973|PMID:7789282) Ensembl
MGI
PMID:7789282 GO_REF:0000107 MGI:72973 NCBI chr 9:48,975,972...49,018,985
Ensembl chr 9:48,974,757...49,017,277
JBrowse link
G PAX3 paired box 3 acts_upstream_of_or_within ISO (MGI:3820487|PMID:17974128) MGI PMID:17974128 MGI:3820487 NCBI chr37:28,346,476...28,443,648
Ensembl chr37:28,346,563...28,444,561
JBrowse link
retinoic acid receptor signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3578715|PMID:15889094) Ensembl
MGI
PMID:15889094 GO_REF:0000107 MGI:3578715 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030
JBrowse link
rostrocaudal neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP6AP2 ATPase H+ transporting accessory protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:35,050,588...35,073,633
Ensembl chr  X:35,050,606...35,073,067
JBrowse link
G BMI1 BMI1 proto-oncogene, polycomb ring finger involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:82985|PMID:8887324) Ensembl
MGI
PMID:8887324 GO_REF:0000107 MGI:82985 NCBI chr 2:10,818,232...10,828,473
Ensembl chr 2:10,818,232...10,833,613
JBrowse link
G COMMD3 COMM domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:10,829,693...10,833,643
Ensembl chr 2:10,818,232...10,833,613
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4421275|PMID:19913509) Ensembl
MGI
PMID:19913509 GO_REF:0000107 MGI:4421275 NCBI chr29:5,979,092...5,981,504
Ensembl chr29:5,979,261...5,981,124
JBrowse link
somite rostral/caudal axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3821807|PMID:18794329) Ensembl
MGI
PMID:18794329 GO_REF:0000107 MGI:3821807 NCBI chr19:29,916,994...30,063,243
Ensembl chr19:29,921,636...30,063,216
JBrowse link
G FOXA2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chr24:1,010,370...1,013,791
Ensembl chr24:1,010,651...1,013,072
JBrowse link
G GDF3 growth differentiation factor 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3611720|PMID:16368929) Ensembl
MGI
PMID:16368929 GO_REF:0000107 MGI:3611720 NCBI chr27:37,125,845...37,129,567
Ensembl chr27:37,125,928...37,129,484
JBrowse link
G KDM6A lysine demethylase 6A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5448135|PMID:22949634) Ensembl
MGI
PMID:22949634 GO_REF:0000107 MGI:5448135 NCBI chr  X:38,745,854...38,964,029
Ensembl chr  X:38,745,854...38,959,842
JBrowse link
G LHX1 LIM homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2157654|PMID:11291865) Ensembl
MGI
PMID:11291865 GO_REF:0000107 MGI:2157654 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164
JBrowse link
G MESP1 mesoderm posterior bHLH transcription factor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:52,738,333...52,739,962
Ensembl chr 3:52,738,366...52,739,755
JBrowse link
G MESP2 mesoderm posterior bHLH transcription factor 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4459001|PMID:20346937)
GO_Central
MGI
PMID:20346937 PMID:21873635 MGI:4459001 NCBI chr 3:52,757,581...52,759,987
Ensembl chr 3:52,756,836...52,760,004
JBrowse link
G NRARP NOTCH regulated ankyrin repeat protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5438472|PMID:21998026) Ensembl
MGI
PMID:21998026 GO_REF:0000107 MGI:5438472 NCBI chr 9:48,394,568...48,396,849
Ensembl chr 9:48,394,754...48,395,098
JBrowse link
G OTX2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446
JBrowse link
G RIPPLY1 ripply transcriptional repressor 1 acts_upstream_of_or_within ISO (MGI:4459001|PMID:20346937) MGI PMID:20346937 MGI:4459001 NCBI chr  X:80,457,529...80,461,281
Ensembl chr  X:80,457,912...80,460,765
JBrowse link
G RIPPLY2 ripply transcriptional repressor 2 acts_upstream_of_or_within
involved_in
ISO (MGI:4459001|PMID:20346937)
(MGI:3613215|PMID:16326386)
MGI
UniProt
PMID:16326386 PMID:20346937 MGI:3613215 MGI:4459001 NCBI chr12:44,144,821...44,168,236 JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1195384|PMID:9420335) Ensembl
MGI
PMID:9420335 GO_REF:0000107 MGI:1195384 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405
JBrowse link
G TBX6 T-box transcription factor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4459001|PMID:20346937) Ensembl
MGI
PMID:20346937 GO_REF:0000107 MGI:4459001 NCBI chr 6:18,093,201...18,098,592
Ensembl chr 6:18,093,189...18,097,636
JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4453264|PMID:20178780) Ensembl
MGI
PMID:20178780 GO_REF:0000107 MGI:4453264 NCBI chr26:6,039,046...6,047,490
Ensembl chr26:6,039,405...6,047,459
JBrowse link
somite specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COBL cordon-bleu WH2 repeat protein involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:7586755) Ensembl
BHF-UCL
PMID:7586755 GO_REF:0000107 NCBI chr18:2,206,957...2,386,333
Ensembl chr18:2,208,260...2,459,206
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3034157|PMID:14960495) Ensembl
MGI
PMID:14960495 GO_REF:0000107 MGI:3034157 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348
JBrowse link
G MEOX1 mesenchyme homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2669571|PMID:12925591) Ensembl
MGI
PMID:12925591 GO_REF:0000107 MGI:2669571 NCBI chr 9:19,614,568...19,641,426
Ensembl chr 9:19,614,503...19,640,908
JBrowse link
G MEOX2 mesenchyme homeobox 2 acts_upstream_of_or_within ISO (MGI:2669571|PMID:12925591) MGI PMID:12925591 MGI:2669571 NCBI chr14:30,258,737...30,324,438
Ensembl chr14:29,864,318...30,324,006
JBrowse link
somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABI1 abl interactor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3577662|PMID:15755804) Ensembl
MGI
PMID:15755804 GO_REF:0000107 MGI:3577662 NCBI chr 2:6,941,752...7,059,466
Ensembl chr 2:6,941,900...7,057,684
JBrowse link
G ATM ATM serine/threonine kinase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3624894|PMID:16687486) Ensembl
MGI
PMID:16687486 GO_REF:0000107 MGI:3624894 NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207
JBrowse link
G AXIN2 axin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3037351|PMID:12636920) Ensembl
MGI
PMID:12636920 GO_REF:0000107 MGI:3037351 NCBI chr 9:14,559,476...14,588,950
Ensembl chr 9:14,559,388...14,588,530
JBrowse link
G BMPR1A bone morphogenetic protein receptor type 1A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3702797|PMID:16943278) Ensembl
MGI
PMID:16943278 GO_REF:0000107 MGI:3702797 NCBI chr 4:34,499,898...34,582,481
Ensembl chr 4:34,517,492...34,578,923
JBrowse link
G CRB2 crumbs cell polarity complex component 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:59,427,661...59,450,436
Ensembl chr 9:59,427,569...59,450,434
JBrowse link
G DLL1 delta like canonical Notch ligand 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3578712|PMID:15902259)
(MGI:5545944|PMID:23072809)
MGI
UniProt
PMID:15902259 PMID:23072809 MGI:3578712 MGI:5545944 NCBI chr12:72,265,078...72,272,347
Ensembl chr12:72,265,682...72,272,348
JBrowse link
G DLL3 delta like canonical Notch ligand 3 acts_upstream_of_or_within ISO (MGI:1095777|PMID:9272948)
(MGI:3620337|PMID:15170697)
MGI PMID:9272948 PMID:15170697 MGI:1095777 MGI:3620337 NCBI chr 1:113,737,662...113,745,936 JBrowse link
G EP300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:24,076,538...24,156,708
Ensembl chr10:24,077,971...24,156,396
JBrowse link
G EPB41L5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:3821807|PMID:18794329) MGI PMID:18794329 MGI:3821807 NCBI chr19:29,916,994...30,063,243
Ensembl chr19:29,921,636...30,063,216
JBrowse link
G FOXB1 forkhead box B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:24,822,137...24,825,833
Ensembl chr30:24,823,815...24,824,792
JBrowse link
G FOXC1 forkhead box C1 involved_in ISO (MGI:2150572|PMID:11562355) UniProt PMID:11562355 MGI:2150572
G FOXC2 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:66,234,336...66,296,007
Ensembl chr 5:66,294,176...66,295,693
JBrowse link
G FOXF1 forkhead box F1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1928688|PMID:11124112) Ensembl
MGI
PMID:11124112 GO_REF:0000107 MGI:1928688 NCBI chr 5:66,343,776...66,347,785
Ensembl chr 5:66,345,150...66,347,935
JBrowse link
G HES7 hes family bHLH transcription factor 7 acts_upstream_of_or_within ISO (MGI:3046002|PMID:15170214)
(MGI:2152470|PMID:11641270), (MGI:4367298|PMID:19779553)
MGI PMID:11641270 PMID:15170214 PMID:19779553 MGI:2152470 MGI:3046002 MGI:4367298 NCBI chr 5:32,944,351...32,950,433
Ensembl chr 5:32,944,037...32,947,591
JBrowse link
G KAT2A lysine acetyltransferase 2A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709911|PMID:17325035)
(MGI:3583034|PMID:15937931)
Ensembl
MGI
PMID:15937931 PMID:17325035 GO_REF:0000107 MGI:3583034 MGI:3709911 NCBI chr 9:20,778,434...20,787,057
Ensembl chr 9:20,779,042...20,787,067
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3510574|PMID:15545629)
(MGI:1334099|PMID:10090727)
Ensembl
MGI
PMID:10090727 PMID:15545629 GO_REF:0000107 MGI:1334099 MGI:3510574 NCBI chr32:28,516,002...28,633,759
Ensembl chr32:28,517,108...28,634,019
JBrowse link
G LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3774705|PMID:18234727) Ensembl
MGI
PMID:18234727 GO_REF:0000107 MGI:3774705 NCBI chr 6:14,631,638...14,640,147
Ensembl chr 6:14,632,691...14,635,485
JBrowse link
G LOC119863920 forkhead box C2 involved_in IEA Ensembl GO_REF:0000107
G LOC483397 interferon-induced transmembrane protein 1 acts_upstream_of_or_within ISO (MGI:3578569|PMID:15857914) MGI PMID:15857914 MGI:3578569 NCBI chr18:25,494,018...25,495,114 JBrowse link
G LOC485469 protocadherin-8 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2451199|PMID:12591245) Ensembl
MGI
PMID:12591245 GO_REF:0000107 MGI:2451199 NCBI chr22:9,860,590...9,865,298
Ensembl chr22:9,860,827...9,865,412
JBrowse link
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G MED12 mediator complex subunit 12 acts_upstream_of_or_within ISO (MGI:4839544|PMID:20589884) MGI PMID:20589884 MGI:4839544 NCBI chr  X:55,487,629...55,508,941
Ensembl chr  X:55,482,013...55,509,992
JBrowse link
G MESP2 mesoderm posterior bHLH transcription factor 2 acts_upstream_of_or_within ISO (MGI:3578712|PMID:15902259) MGI PMID:15902259 MGI:3578712 NCBI chr 3:52,757,581...52,759,987
Ensembl chr 3:52,756,836...52,760,004
JBrowse link
G MIB1 MIB E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3603078|PMID:16000382) Ensembl
MGI
PMID:16000382 GO_REF:0000107 MGI:3603078 NCBI chr 7:66,173,414...66,289,477
Ensembl chr 7:66,178,594...66,289,491
JBrowse link
G MSGN1 mesogenin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1928575|PMID:11124811), (MGI:5545970|PMID:21750544) Ensembl
MGI
PMID:11124811 PMID:21750544 GO_REF:0000107 MGI:1928575 MGI:5545970 NCBI chr17:13,266,674...13,267,968
Ensembl chr17:13,266,674...13,267,240
JBrowse link
G MYF5 myogenic factor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1861090|PMID:10929709)
(MGI:3849775|PMID:19531352)
(MGI:78390|PMID:8565825)
Ensembl
MGI
PMID:8565825 PMID:10929709 PMID:19531352 GO_REF:0000107 MGI:1861090 MGI:3849775 MGI:78390 NCBI chr15:23,049,235...23,051,604
Ensembl chr15:23,048,585...23,051,970
JBrowse link
G MYF6 myogenic factor 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:76810|PMID:7588068) Ensembl
MGI
PMID:7588068 GO_REF:0000107 MGI:76810 NCBI chr15:23,039,090...23,041,092
Ensembl chr15:23,039,416...23,041,019
JBrowse link
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within ISO (MGI:3701029|PMID:16831833) MGI PMID:16831833 MGI:3701029 NCBI chr36:25,965,243...26,054,775
Ensembl chr36:25,965,938...26,054,760
JBrowse link
G NKX3-1 NK3 homeobox 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9621431) Ensembl
BHF-UCL
PMID:9621431 GO_REF:0000107 NCBI chr25:33,815,343...33,817,465
Ensembl chr25:33,815,095...33,817,474
JBrowse link
G NLE1 notchless homolog 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5608942|PMID:24875805) Ensembl
MGI
PMID:24875805 GO_REF:0000107 MGI:5608942 NCBI chr 9:38,222,083...38,230,819
Ensembl chr 9:38,222,051...38,365,621
JBrowse link
G PALB2 partner and localizer of BRCA2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4459579|PMID:20484223) Ensembl
MGI
PMID:20484223 GO_REF:0000107 MGI:4459579 NCBI chr 6:22,209,711...22,237,798
Ensembl chr 6:22,209,384...22,237,745
JBrowse link
G PAX1 paired box 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3590033|PMID:16093716) Ensembl
MGI
PMID:16093716 GO_REF:0000107 MGI:3590033 NCBI chr24:1,742,570...1,752,593
Ensembl chr24:1,743,940...1,753,185
JBrowse link
G PLXNA2 plexin A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19666519) Ensembl
BHF-UCL
PMID:19666519 GO_REF:0000107 NCBI chr 7:6,863,518...7,049,301
Ensembl chr 7:6,863,663...7,049,250
JBrowse link
G POFUT1 protein O-fucosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2660984|PMID:12697902) Ensembl
MGI
PMID:12697902 GO_REF:0000107 MGI:2660984 NCBI chr24:21,608,905...21,636,084
Ensembl chr24:21,608,899...21,632,979
JBrowse link
G POGLUT1 protein O-glucosyltransferase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1267118|PMID:9636176) Ensembl
MGI
PMID:9636176 GO_REF:0000107 MGI:1267118 NCBI chr33:23,122,682...23,150,863
Ensembl chr33:23,121,563...23,148,678
JBrowse link
G PRKDC protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (MGI:3624894|PMID:16687486) MGI PMID:16687486 MGI:3624894 NCBI chr29:24,904...243,926
Ensembl chr29:35,007...243,895
JBrowse link
G PSEN1 presenilin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:87649|PMID:9153393)
(MGI:1347695|PMID:10557208), (MGI:4367298|PMID:19779553)
Ensembl
MGI
PMID:9153393 PMID:10557208 PMID:19779553 GO_REF:0000107 MGI:1347695 MGI:4367298 MGI:87649 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
G PSEN2 presenilin 2 acts_upstream_of_or_within ISO (MGI:1347695|PMID:10557208), (MGI:4367298|PMID:19779553) MGI PMID:10557208 PMID:19779553 MGI:1347695 MGI:4367298 NCBI chr 7:38,147,157...38,163,023
Ensembl chr 7:38,147,173...38,166,722
JBrowse link
G RAD51D RAD51 paralog D involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:38,242,178...38,259,788
Ensembl chr 9:38,222,051...38,365,621
JBrowse link
G RBPJ recombination signal binding protein for immunoglobulin kappa J region involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367298|PMID:19779553) Ensembl
MGI
PMID:19779553 GO_REF:0000107 MGI:4367298 NCBI chr 3:84,060,417...84,286,008
Ensembl chr 3:84,064,440...84,286,360
JBrowse link
G RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:38,271,419...38,346,103
Ensembl chr 9:38,222,051...38,365,621
JBrowse link
G RIPPLY2 ripply transcriptional repressor 2 involved_in
acts_upstream_of_or_within
ISO (MGI:3613215|PMID:16326386)
(MGI:3715395|PMID:17531978)
UniProt
MGI
PMID:16326386 PMID:17531978 MGI:3613215 MGI:3715395 NCBI chr12:44,144,821...44,168,236 JBrowse link
G ROR2 receptor tyrosine kinase like orphan receptor 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3037488|PMID:14745966) Ensembl
MGI
PMID:14745966 GO_REF:0000107 MGI:3037488 NCBI chr 1:95,209,122...95,280,956
Ensembl chr 1:95,088,745...95,280,151
JBrowse link
G SEMA3C semaphorin 3C involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:19666519) Ensembl
BHF-UCL
PMID:19666519 GO_REF:0000107 NCBI chr18:20,457,683...20,748,008
Ensembl chr18:20,459,925...20,635,276
JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (PMID:10654605)
(MGI:3618960|PMID:16467359)
BHF-UCL
MGI
PMID:10654605 PMID:16467359 MGI:3618960 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SFRP2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3618960|PMID:16467359) MGI PMID:16467359 MGI:3618960 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3618021|PMID:15183723) Ensembl
MGI
PMID:15183723 GO_REF:0000107 MGI:3618021 NCBI chr30:31,246,313...31,360,098
Ensembl chr30:31,245,657...31,363,337
JBrowse link
G TBX18 T-box transcription factor 18 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3044041|PMID:15155583)
GO_Central
MGI
PMID:15155583 PMID:21873635 MGI:3044041 NCBI chr12:44,901,076...44,929,730
Ensembl chr12:44,873,119...44,929,205
JBrowse link
G TBX19 T-box transcription factor 19 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:30,198,912...30,248,410
Ensembl chr 7:30,185,850...30,365,512
JBrowse link
G TBXT T-box transcription factor T involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3056222|PMID:15384171)
(MGI:64493|PMID:8293872)
(MGI:3701028|PMID:16835439)
GO_Central
MGI
PMID:8293872 PMID:15384171 PMID:16835439 PMID:21873635 MGI:3056222 MGI:3701028 MGI:64493 NCBI chr 1:54,183,495...54,192,331
Ensembl chr 1:54,183,153...54,192,352
JBrowse link
G TCAP titin-cap involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:9817758) Ensembl
BHF-UCL
PMID:9817758 GO_REF:0000107 NCBI chr 9:22,811,792...22,812,980
Ensembl chr 9:22,794,177...22,813,012
JBrowse link
G TCF15 transcription factor 15 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:84545|PMID:8955271) Ensembl
MGI
PMID:8955271 GO_REF:0000107 MGI:84545 NCBI chr24:20,274,113...20,281,081
Ensembl chr24:20,274,050...20,280,270
JBrowse link
G TMED2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (MGI:4453264|PMID:20178780) MGI PMID:20178780 MGI:4453264 NCBI chr26:6,039,046...6,047,490
Ensembl chr26:6,039,405...6,047,459
JBrowse link
G TP53 tumor protein p53 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709913|PMID:17320900) Ensembl
MGI
PMID:17320900 GO_REF:0000107 MGI:3709913 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109
JBrowse link
G TTN titin acts_upstream_of_or_within ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chr36:22,146,870...22,417,858
Ensembl chr36:22,147,824...22,417,826
JBrowse link
G WNT3A Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3611726|PMID:16291790), (MGI:64780|PMID:8299937)
(MGI:3037351|PMID:12636920)
MGI PMID:8299937 PMID:12636920 PMID:16291790 MGI:3037351 MGI:3611726 MGI:64780 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412
JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4413372|PMID:19795512) Ensembl
MGI
PMID:19795512 GO_REF:0000107 MGI:4413372 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
JBrowse link
G XRCC2 X-ray repair cross complementing 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3708426|PMID:17116431) Ensembl
MGI
PMID:17116431 GO_REF:0000107 MGI:3708426 NCBI chr16:16,402,821...16,429,095
Ensembl chr16:16,402,933...16,429,037
JBrowse link
G ZC3H7B zinc finger CCCH-type containing 7B acts_upstream_of_or_within ISO (MGI:3583034|PMID:15937931) MGI PMID:15937931 MGI:3583034 NCBI chr10:23,882,379...23,944,850
Ensembl chr10:23,884,981...23,920,131
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (MGI:3590396|PMID:16157277), (MGI:3624924|PMID:16598713) MGI PMID:16157277 PMID:16598713 MGI:3590396 MGI:3624924 NCBI chr19:46,419,812...46,541,888
Ensembl chr19:46,423,998...46,542,122
JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228
JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OSR1 odd-skipped related transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:14,508,543...14,515,657
Ensembl chr17:14,509,333...14,589,228
JBrowse link
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMP4 bone morphogenetic protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:29,997,563...30,254,307
Ensembl chr 8:29,997,569...30,004,557
JBrowse link
spinal cord anterior/posterior patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDF11 growth differentiation factor 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3701017|PMID:16790475) Ensembl
MGI
PMID:16790475 GO_REF:0000107 MGI:3701017 NCBI chr10:142,039...152,537
Ensembl chr10:145,036...148,373
JBrowse link
thorax and anterior abdomen determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NEUROG1 neurogenin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:23,563,128...23,564,819
Ensembl chr11:23,563,803...23,564,543
JBrowse link
G TIFAB TIFA inhibitor involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:23,492,317...23,495,825
Ensembl chr11:23,492,867...23,493,352
JBrowse link
G WT1 WT1 transcription factor involved_in ISO (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chr18:35,099,660...35,148,767
Ensembl chr18:35,103,934...35,148,000
JBrowse link
transforming growth factor beta receptor signaling pathway involved in primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NODAL nodal growth differentiation factor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2677178|PMID:14511481) Ensembl
MGI
PMID:14511481 GO_REF:0000107 MGI:2677178 NCBI chr 4:21,366,828...21,374,623
Ensembl chr 4:21,367,583...21,375,151
JBrowse link
Wnt signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DKK1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chr26:35,697,428...35,701,596
Ensembl chr26:35,697,618...35,701,496
JBrowse link
G LRP6 LDL receptor related protein 6 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3055483|PMID:15469977)
GO_Central
MGI
PMID:15469977 PMID:21873635 MGI:3055483 NCBI chr27:34,003,334...34,166,334
Ensembl chr27:34,003,539...34,161,437
JBrowse link
G SFRP1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chr16:24,262,451...24,306,162
Ensembl chr16:24,261,946...24,302,964
JBrowse link
G SFRP2 secreted frizzled related protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3793375|PMID:18257070) Ensembl
MGI
PMID:18257070 GO_REF:0000107 MGI:3793375 NCBI chr15:51,541,197...51,548,765
Ensembl chr15:51,540,500...51,548,765
JBrowse link
zona limitans intrathalamica formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SHH sonic hedgehog signaling molecule ISO RGD PMID:25281935 RGD:12832757 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903
JBrowse link
zygotic determination of anterior/posterior axis, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCKAP1 NCK associated protein 1 acts_upstream_of_or_within ISO (MGI:3701029|PMID:16831833) MGI PMID:16831833 MGI:3701029 NCBI chr36:25,965,243...26,054,775
Ensembl chr36:25,965,938...26,054,760
JBrowse link
G PCSK6 proprotein convertase subtilisin/kexin type 6 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1858546|PMID:10809672) Ensembl
MGI
PMID:10809672 GO_REF:0000107 MGI:1858546 NCBI chr 3:39,582,804...39,768,838
Ensembl chr 3:39,582,819...39,767,929
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16153
    multicellular organismal process 7683
      pattern specification process 481
        regionalization 384
          anterior/posterior pattern specification 234
            anterior region determination 0
            anterior/posterior axis specification + 54
            anterior/posterior pattern specification involved in kidney development + 2
            anterior/posterior pattern specification, imaginal disc + 0
            compartment pattern specification + 4
            embryonic heart tube anterior/posterior pattern specification + 3
            forebrain anterior/posterior pattern specification 4
            foregut regionalization + 3
            neural plate anterior/posterior regionalization + 6
            periodic partitioning by pair rule gene 0
            posterior abdomen determination + 0
            rostrocaudal neural tube patterning + 15
            somitogenesis + 81
            spinal cord anterior/posterior patterning + 1
            thorax and anterior abdomen determination + 3
Path 2
Term Annotations click to browse term
  biological_process 16153
    developmental process 6395
      anatomical structure development 5941
        multicellular organism development 5428
          pattern specification process 481
            regionalization 384
              anterior/posterior pattern specification 234
                anterior region determination 0
                anterior/posterior axis specification + 54
                anterior/posterior pattern specification involved in kidney development + 2
                anterior/posterior pattern specification, imaginal disc + 0
                compartment pattern specification + 4
                embryonic heart tube anterior/posterior pattern specification + 3
                forebrain anterior/posterior pattern specification 4
                foregut regionalization + 3
                neural plate anterior/posterior regionalization + 6
                periodic partitioning by pair rule gene 0
                posterior abdomen determination + 0
                rostrocaudal neural tube patterning + 15
                somitogenesis + 81
                spinal cord anterior/posterior patterning + 1
                thorax and anterior abdomen determination + 3
paths to the root