Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:anterior/posterior pattern specification
go back to main search page
Accession:GO:0009952 term browser browse the term
Definition:The regionalization process in which specific areas of cell differentiation are determined along the anterior-posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.
Synonyms:related_synonym: anterior/posterior pattern formation


GViewer not supported for chinchilla.
show annotations for term's descendants           Sort by:
 
anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin A receptor type 2A acts_upstream_of_or_within ISO (MGI:1344152|PMID:10452853), (MGI:3689276|PMID:16991118) MGI PMID:10452853 PMID:16991118 MGI:1344152 MGI:3689276 NCBI chrNW_004955440:13,849,926...13,931,374
Ensembl chrNW_004955440:13,849,926...13,931,374
JBrowse link
G Acvr2b activin A receptor type 2B involved_in
acts_upstream_of_or_within
ISO (PMID:9916847)
(MGI:1344152|PMID:10452853), (MGI:3689276|PMID:16991118)
(MGI:3689276|PMID:16991118), (MGI:3695190|PMID:16845371), (MGI:894948|PMID:9242489)
(MGI:3695190|PMID:16845371)
(MGI:3525050|PMID:15542835)
HGNC-UCL
MGI
PMID:9242489 PMID:9916847 PMID:10452853 PMID:15542835 PMID:16845371 PMID:16991118 MGI:1344152 MGI:3525050 MGI:3689276 MGI:3695190 MGI:894948 NCBI chrNW_004955427:25,438,652...25,467,360
Ensembl chrNW_004955427:25,438,652...25,467,360
JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within ISO (MGI:3703483|PMID:17067568)
(MGI:3530707|PMID:15652703), (MGI:3578600|PMID:15872003)
(MGI:3612223|PMID:16368932)
MGI PMID:15652703 PMID:15872003 PMID:16368932 PMID:17067568 MGI:3530707 MGI:3578600 MGI:3612223 MGI:3703483 NCBI chrNW_004955450:16,406,578...16,453,048
Ensembl chrNW_004955450:16,406,436...16,453,180
JBrowse link
G Alx4 ALX homeobox 4 acts_upstream_of_or_within ISO (MGI:1314705|PMID:9847249)
(MGI:1098911|PMID:9374397), (MGI:1314705|PMID:9847249)
MGI PMID:9374397 PMID:9847249 MGI:1098911 MGI:1314705 NCBI chrNW_004955422:3,278,615...3,290,799
Ensembl chrNW_004955422:3,278,615...3,291,714
JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO (MGI:2449253|PMID:12645927) MGI PMID:12645927 MGI:2449253 NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832
JBrowse link
G Arc activity regulated cytoskeleton associated protein acts_upstream_of_or_within ISO (MGI:1355000|PMID:10727859) MGI PMID:10727859 MGI:1355000 NCBI chrNW_004955454:1,379,998...1,383,414
Ensembl chrNW_004955454:1,379,998...1,383,414
JBrowse link
G Barx1 BARX homeobox 1 acts_upstream_of_or_within ISO (MGI:3766872|PMID:17855428) MGI PMID:17855428 MGI:3766872 NCBI chrNW_004955515:4,230,713...4,234,189
Ensembl chrNW_004955515:4,229,783...4,234,191
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (MGI:3051920|PMID:15136140) MGI PMID:15136140 MGI:3051920 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 acts_upstream_of_or_within ISO (MGI:3525050|PMID:15542835)
(MGI:1855789|PMID:10772805)
MGI PMID:10772805 PMID:15542835 MGI:1855789 MGI:3525050 NCBI chrNW_004955457:12,235,780...12,315,680
Ensembl chrNW_004955457:12,235,780...12,316,727
JBrowse link
G Bptf bromodomain PHD finger transcription factor acts_upstream_of_or_within ISO (MGI:3840601|PMID:18974875)
(MGI:3821803|PMID:18794365)
MGI PMID:18794365 PMID:18974875 MGI:3821803 MGI:3840601 NCBI chrNW_004955478:6,990,816...7,088,751
Ensembl chrNW_004955478:6,990,833...7,086,721
JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (MGI:3525050|PMID:15542835) MGI PMID:15542835 MGI:3525050 NCBI chrNW_004955406:39,303,221...39,307,308
Ensembl chrNW_004955406:39,303,175...39,308,778
JBrowse link
G Cdon cell adhesion associated, oncogene regulated acts_upstream_of_or_within ISO (MGI:4422144|PMID:19754878) MGI PMID:19754878 MGI:4422144 NCBI chrNW_004955412:27,004,391...27,093,968
Ensembl chrNW_004955412:27,003,919...27,065,989
JBrowse link
G Cdx1 caudal type homeobox 1 acts_upstream_of_or_within ISO (MGI:2154839|PMID:11784046), (MGI:77274|PMID:7585967) MGI PMID:7585967 PMID:11784046 MGI:2154839 MGI:77274 NCBI chrNW_004955415:4,337,903...4,355,782
Ensembl chrNW_004955415:4,337,903...4,355,782
JBrowse link
G Cdx2 caudal type homeobox 2 acts_upstream_of_or_within ISO (MGI:4398801|PMID:19853565) MGI PMID:19853565 MGI:4398801 NCBI chrNW_004955497:7,316,372...7,321,627 JBrowse link
G Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 acts_upstream_of_or_within ISO (MGI:4429791|PMID:19357712)
(MGI:3835694|PMID:18849982)
MGI PMID:18849982 PMID:19357712 MGI:3835694 MGI:4429791 NCBI chrNW_004955413:30,455,194...30,561,124
Ensembl chrNW_004955413:30,457,030...30,561,124
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:1197794|PMID:9501024) MGI PMID:9501024 MGI:1197794 NCBI chrNW_004955434:17,738,281...17,740,823
Ensembl chrNW_004955434:17,734,495...17,740,823
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO (MGI:3614586|PMID:16399080) MGI PMID:16399080 MGI:3614586 NCBI chrNW_004955442:19,358,202...19,388,552
Ensembl chrNW_004955442:19,358,081...19,388,815
JBrowse link
G Emx2 empty spiracles homeobox 2 acts_upstream_of_or_within ISO (MGI:3578670|PMID:15917450)
(MGI:2386059|PMID:12196586)
MGI PMID:12196586 PMID:15917450 MGI:2386059 MGI:3578670 NCBI chrNW_004955431:22,192,446...22,199,141
Ensembl chrNW_004955431:22,192,446...22,199,279
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:1344734|PMID:10498685) MGI PMID:10498685 MGI:1344734 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255
JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO (MGI:1934969|PMID:11358868) MGI PMID:11358868 MGI:1934969 NCBI chrNW_004955454:3,094,015...3,096,060
Ensembl chrNW_004955454:3,094,033...3,095,512
JBrowse link
G Fuz fuzzy planar cell polarity protein acts_upstream_of_or_within ISO (MGI:4367921|PMID:19877275) MGI PMID:19877275 MGI:4367921 NCBI chrNW_004955559:1,112,670...1,117,620
Ensembl chrNW_004955559:1,112,855...1,117,413
JBrowse link
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO (MGI:1339513|PMID:10391213)
(MGI:5509072|PMID:23918385)
MGI PMID:10391213 PMID:23918385 MGI:1339513 MGI:5509072 NCBI chrNW_004955458:3,388,402...3,398,040
Ensembl chrNW_004955458:3,388,402...3,398,040
JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (MGI:5439039|PMID:22841643) MGI PMID:22841643 MGI:5439039 NCBI chrNW_004955459:8,892,917...9,124,672
Ensembl chrNW_004955459:8,892,869...9,118,499
JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO (MGI:3053244|PMID:15315762)
(MGI:5439039|PMID:22841643)
MGI PMID:15315762 PMID:22841643 MGI:3053244 MGI:5439039 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
JBrowse link
G Grsf1 G-rich RNA sequence binding factor 1 acts_upstream_of_or_within ISO (MGI:3578569|PMID:15857914) MGI PMID:15857914 MGI:3578569 NCBI chrNW_004955447:2,181,841...2,194,650
Ensembl chrNW_004955447:2,181,839...2,194,650
JBrowse link
G Hhex hematopoietically expressed homeobox involved_in ISO (MGI:3777521|PMID:16936074) UniProt PMID:16936074 MGI:3777521 NCBI chrNW_004955425:737,506...742,775
Ensembl chrNW_004955425:735,378...742,775
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 acts_upstream_of_or_within ISO (MGI:3619785|PMID:16537918) MGI PMID:16537918 MGI:3619785 NCBI chrNW_004955435:17,201,866...17,257,371
Ensembl chrNW_004955435:17,172,651...17,257,371
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 acts_upstream_of_or_within ISO (MGI:3619785|PMID:16537918) MGI PMID:16537918 MGI:3619785 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844
JBrowse link
G Hnf1b HNF1 homeobox B acts_upstream_of_or_within ISO (MGI:3578600|PMID:15872003) MGI PMID:15872003 MGI:3578600 NCBI chrNW_004955451:320,283...371,420
Ensembl chrNW_004955451:320,283...371,420
JBrowse link
G Hoxa1 homeobox A1 acts_upstream_of_or_within ISO (MGI:3055618|PMID:15367676)
(MGI:1346308|PMID:10529420)
MGI PMID:10529420 PMID:15367676 MGI:1346308 MGI:3055618 NCBI chrNW_004955410:28,788,245...28,790,971
Ensembl chrNW_004955410:28,787,817...28,790,962
JBrowse link
G Hoxa10 homeobox A10 acts_upstream_of_or_within ISO (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chrNW_004955410:28,864,785...28,874,454
Ensembl chrNW_004955410:28,864,785...28,874,454
JBrowse link
G Hoxa11 homeobox A11 acts_upstream_of_or_within ISO (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chrNW_004955410:28,875,780...28,879,643
Ensembl chrNW_004955410:28,877,055...28,879,465
JBrowse link
G Hoxa2 homeobox A2 acts_upstream_of_or_within ISO (MGI:1098901|PMID:9367425) MGI PMID:9367425 MGI:1098901 NCBI chrNW_004955410:28,794,878...28,798,231
Ensembl chrNW_004955410:28,794,878...28,798,231
JBrowse link
G Hoxa3 homeobox A3 acts_upstream_of_or_within ISO (MGI:67616|PMID:7913519)
(MGI:1195045|PMID:9441667)
MGI PMID:7913519 PMID:9441667 MGI:1195045 MGI:67616 NCBI chrNW_004955410:28,801,918...28,846,605
Ensembl chrNW_004955410:28,800,139...28,834,429
JBrowse link
G Hoxa4 homeobox A4 acts_upstream_of_or_within ISO (MGI:74948|PMID:7628700)
(MGI:67413|PMID:7918106)
MGI PMID:7628700 PMID:7918106 MGI:67413 MGI:74948 NCBI chrNW_004955410:28,822,814...28,827,294
Ensembl chrNW_004955410:28,823,500...28,825,020
JBrowse link
G Hoxa5 homeobox A5 acts_upstream_of_or_within ISO (MGI:3720535|PMID:17626057)
(MGI:1203259|PMID:9603431), (MGI:63693|PMID:7901120)
(MGI:3723390|PMID:17417799)
MGI PMID:7901120 PMID:9603431 PMID:17417799 PMID:17626057 MGI:1203259 MGI:3720535 MGI:3723390 MGI:63693 NCBI chrNW_004955410:28,835,795...28,838,244
Ensembl chrNW_004955410:28,834,127...28,838,244
JBrowse link
G Hoxa6 homeobox A6 acts_upstream_of_or_within ISO (MGI:3720535|PMID:17626057)
(MGI:67413|PMID:7918106)
MGI PMID:7918106 PMID:17626057 MGI:3720535 MGI:67413 NCBI chrNW_004955410:28,839,924...28,844,328
Ensembl chrNW_004955410:28,839,924...28,844,328
JBrowse link
G Hoxa7 homeobox A7 acts_upstream_of_or_within ISO (MGI:1313067|PMID:9784603) MGI PMID:9784603 MGI:1313067 NCBI chrNW_004955410:28,848,029...28,851,069
Ensembl chrNW_004955410:28,847,893...28,851,062
JBrowse link
G Hoxa9 homeobox A9 acts_upstream_of_or_within ISO (MGI:78984|PMID:8625797)
(MGI:3720535|PMID:17626057)
(MGI:85243|PMID:9013929)
MGI PMID:8625797 PMID:9013929 PMID:17626057 MGI:3720535 MGI:78984 MGI:85243 NCBI chrNW_004955410:28,856,661...28,861,803
Ensembl chrNW_004955410:28,856,661...28,861,803
JBrowse link
G Hoxb1 homeobox B1 acts_upstream_of_or_within ISO (MGI:1859107|PMID:10885747)
(MGI:1346308|PMID:10529420)
MGI PMID:10529420 PMID:10885747 MGI:1346308 MGI:1859107 NCBI chrNW_004955451:12,707,560...12,708,950
Ensembl chrNW_004955451:12,707,462...12,709,899
JBrowse link
G Hoxb2 homeobox B2 acts_upstream_of_or_within ISO (MGI:85074|PMID:9012503)
(MGI:1859107|PMID:10885747)
MGI PMID:9012503 PMID:10885747 MGI:1859107 MGI:85074 NCBI chrNW_004955451:12,693,764...12,697,825
Ensembl chrNW_004955451:12,694,868...12,697,846
JBrowse link
G Hoxb3 homeobox B3 acts_upstream_of_or_within ISO (MGI:1859107|PMID:10885747)
(MGI:1195045|PMID:9441667)
MGI PMID:9441667 PMID:10885747 MGI:1195045 MGI:1859107 NCBI chrNW_004955451:12,651,229...12,690,941
Ensembl chrNW_004955451:12,687,364...12,689,511
JBrowse link
G Hoxb4 homeobox B4 acts_upstream_of_or_within ISO (MGI:74948|PMID:7628700)
(MGI:85074|PMID:9012503)
(MGI:1859107|PMID:10885747)
MGI PMID:7628700 PMID:9012503 PMID:10885747 MGI:1859107 MGI:74948 MGI:85074 NCBI chrNW_004955451:12,661,290...12,665,576
Ensembl chrNW_004955451:12,662,795...12,664,374
JBrowse link
G Hoxb5 homeobox B5 acts_upstream_of_or_within ISO (MGI:3720535|PMID:17626057)
(MGI:1859107|PMID:10885747)
(MGI:70296|PMID:7828847)
MGI PMID:7828847 PMID:10885747 PMID:17626057 MGI:1859107 MGI:3720535 MGI:70296 NCBI chrNW_004955451:12,637,229...12,650,261
Ensembl chrNW_004955451:12,637,822...12,650,261
JBrowse link
G Hoxb6 homeobox B6 acts_upstream_of_or_within ISO (MGI:70296|PMID:7828847)
(MGI:3720535|PMID:17626057)
(MGI:1859107|PMID:10885747)
MGI PMID:7828847 PMID:10885747 PMID:17626057 MGI:1859107 MGI:3720535 MGI:70296 NCBI chrNW_004955451:12,637,221...12,645,749
Ensembl chrNW_004955451:12,637,221...12,645,749
JBrowse link
G Hoxb7 homeobox B7 acts_upstream_of_or_within ISO (MGI:1313067|PMID:9784603)
(MGI:1859107|PMID:10885747)
MGI PMID:9784603 PMID:10885747 MGI:1313067 MGI:1859107 NCBI chrNW_004955451:12,630,276...12,634,641
Ensembl chrNW_004955451:12,630,276...12,634,634
JBrowse link
G Hoxb9 homeobox B9 acts_upstream_of_or_within ISO (MGI:85243|PMID:9013929)
(MGI:1859107|PMID:10885747)
(MGI:3720535|PMID:17626057)
MGI PMID:9013929 PMID:10885747 PMID:17626057 MGI:1859107 MGI:3720535 MGI:85243 NCBI chrNW_004955451:12,616,465...12,616,926 JBrowse link
G Hoxc10 homeobox C10 acts_upstream_of_or_within ISO (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chrNW_004955458:1,243,529...1,248,653
Ensembl chrNW_004955458:1,243,529...1,248,661
JBrowse link
G Hoxc11 homeobox C11 acts_upstream_of_or_within ISO (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chrNW_004955458:1,231,625...1,234,785
Ensembl chrNW_004955458:1,231,445...1,234,798
JBrowse link
G Hoxc13 homeobox C13 acts_upstream_of_or_within ISO (MGI:1195385|PMID:9420327) MGI PMID:9420327 MGI:1195385 NCBI chrNW_004955458:1,197,295...1,205,098
Ensembl chrNW_004955458:1,197,295...1,205,127
JBrowse link
G Hoxc4 homeobox C4 acts_upstream_of_or_within ISO (MGI:79121|PMID:8626021)
(MGI:81673|PMID:8660891)
MGI PMID:8626021 PMID:8660891 MGI:79121 MGI:81673 NCBI chrNW_004955458:1,251,601...1,313,291
Ensembl chrNW_004955458:1,309,119...1,313,344
JBrowse link
G Hoxc5 homeobox C5 acts_upstream_of_or_within ISO (MGI:3720535|PMID:17626057) MGI PMID:17626057 MGI:3720535 NCBI chrNW_004955458:1,288,411...1,293,095
Ensembl chrNW_004955458:1,288,411...1,293,270
JBrowse link
G Hoxc6 homeobox C6 acts_upstream_of_or_within ISO (MGI:3720535|PMID:17626057) MGI PMID:17626057 MGI:3720535 NCBI chrNW_004955458:1,284,351...1,288,391
Ensembl chrNW_004955458:1,284,351...1,288,391
JBrowse link
G Hoxc8 homeobox C8 acts_upstream_of_or_within ISO (MGI:1933164|PMID:11311170) MGI PMID:11311170 MGI:1933164 NCBI chrNW_004955458:1,267,247...1,271,354
Ensembl chrNW_004955458:1,267,247...1,272,690
JBrowse link
G Hoxc9 homeobox C9 acts_upstream_of_or_within ISO (MGI:73980|PMID:7547473)
(MGI:3720535|PMID:17626057)
MGI PMID:7547473 PMID:17626057 MGI:3720535 MGI:73980 NCBI chrNW_004955458:1,258,364...1,261,510
Ensembl chrNW_004955458:1,258,364...1,261,510
JBrowse link
G Hoxd10 homeobox D10 acts_upstream_of_or_within ISO (MGI:1350864|PMID:10642795)
(MGI:2667742|PMID:12869760)
MGI PMID:10642795 PMID:12869760 MGI:1350864 MGI:2667742 NCBI chrNW_004955403:20,543,224...20,548,801
Ensembl chrNW_004955403:20,543,224...20,548,801
JBrowse link
G Hoxd11 homeobox D11 acts_upstream_of_or_within ISO (MGI:2667742|PMID:12869760) MGI PMID:12869760 MGI:2667742 NCBI chrNW_004955403:20,541,870...20,556,574 JBrowse link
G Hoxd13 homeobox D13 acts_upstream_of_or_within ISO (MGI:63627|PMID:8106170) MGI PMID:8106170 MGI:63627 NCBI chrNW_004955403:20,568,314...20,575,579
Ensembl chrNW_004955403:20,568,314...20,575,579
JBrowse link
G Hoxd3 homeobox D3 acts_upstream_of_or_within ISO (MGI:67616|PMID:7913519)
(MGI:1195045|PMID:9441667)
(MGI:63793|PMID:7910549), (MGI:67616|PMID:7913519)
MGI PMID:7910549 PMID:7913519 PMID:9441667 MGI:1195045 MGI:63793 MGI:67616 NCBI chrNW_004955403:20,489,663...20,496,021 JBrowse link
G Hoxd4 homeobox D4 acts_upstream_of_or_within ISO (MGI:74948|PMID:7628700)
(MGI:72992|PMID:7750651)
MGI PMID:7628700 PMID:7750651 MGI:72992 MGI:74948 NCBI chrNW_004955403:20,510,364...20,526,564
Ensembl chrNW_004955403:20,510,364...20,526,353
JBrowse link
G Hoxd8 homeobox D8 acts_upstream_of_or_within ISO (MGI:1933164|PMID:11311170) MGI PMID:11311170 MGI:1933164 NCBI chrNW_004955403:20,530,536...20,532,580 JBrowse link
G Hoxd9 homeobox D9 acts_upstream_of_or_within ISO (MGI:78984|PMID:8625797)
(MGI:3720535|PMID:17626057)
(MGI:1350864|PMID:10642795)
MGI PMID:8625797 PMID:10642795 PMID:17626057 MGI:1350864 MGI:3720535 MGI:78984 NCBI chrNW_004955451:12,619,722...12,621,320 JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO (MGI:3609520|PMID:16109169) MGI PMID:16109169 MGI:3609520 NCBI chrNW_004955514:1,906,189...2,042,357
Ensembl chrNW_004955514:1,906,502...2,038,889
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO (MGI:3579954|PMID:15930098)
(MGI:2660994|PMID:12701101)
MGI PMID:12701101 PMID:15930098 MGI:2660994 MGI:3579954 NCBI chrNW_004955497:1,338,959...1,454,788
Ensembl chrNW_004955497:1,338,904...1,455,122
JBrowse link
G Kif3a kinesin family member 3A acts_upstream_of_or_within ISO (MGI:1336552|PMID:10220415) MGI PMID:10220415 MGI:1336552 NCBI chrNW_004955408:4,072,823...4,115,975
Ensembl chrNW_004955408:4,069,639...4,115,998
JBrowse link
G Kmt2a lysine methyltransferase 2A acts_upstream_of_or_within ISO (MGI:3625774|PMID:16618927)
(MGI:3530206|PMID:15741318)
MGI PMID:15741318 PMID:16618927 MGI:3530206 MGI:3625774 NCBI chrNW_004955412:19,586,435...19,670,149 JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (MGI:1344734|PMID:10498685) MGI PMID:10498685 MGI:1344734 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within ISO (MGI:3045836|PMID:15142971) MGI PMID:15142971 MGI:3045836 NCBI chrNW_004955422:17,394,371...17,475,244
Ensembl chrNW_004955422:17,394,371...17,505,763
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3045836|PMID:15142971)
(MGI:3603992|PMID:16126904)
(MGI:4413372|PMID:19795512)
MGI PMID:15142971 PMID:16126904 PMID:19795512 MGI:3045836 MGI:3603992 MGI:4413372 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
JBrowse link
G Mllt3 MLLT3 super elongation complex subunit acts_upstream_of_or_within ISO (MGI:2387913|PMID:12242306) MGI PMID:12242306 MGI:2387913 NCBI chrNW_004955434:22,594,681...22,873,826 JBrowse link
G Msx1 msh homeobox 1 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chrNW_004955514:4,923,552...4,927,471
Ensembl chrNW_004955514:4,923,552...4,927,471
JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO (MGI:4948979|PMID:21465616) MGI PMID:21465616 MGI:4948979 NCBI chrNW_004955408:27,323,405...27,329,484
Ensembl chrNW_004955408:27,323,360...27,329,755
JBrowse link
G Neurod1 neuronal differentiation 1 acts_upstream_of_or_within ISO (MGI:3613103|PMID:16368089) MGI PMID:16368089 MGI:3613103 NCBI chrNW_004955403:15,595,888...15,600,040
Ensembl chrNW_004955403:15,595,888...15,600,040
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:3056019|PMID:15302604)
(MGI:2155575|PMID:11311163)
(MGI:3624254|PMID:16496285)
(MGI:2136068|PMID:11418863), (MGI:3042338|PMID:15004567)
MGI PMID:11311163 PMID:11418863 PMID:15004567 PMID:15302604 PMID:16496285 MGI:2136068 MGI:2155575 MGI:3042338 MGI:3056019 MGI:3624254 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628
JBrowse link
G Nr2f2 nuclear receptor subfamily 2 group F member 2 acts_upstream_of_or_within ISO (MGI:3578605|PMID:15829524) MGI PMID:15829524 MGI:3578605 NCBI chrNW_004955416:24,148,052...24,154,406
Ensembl chrNW_004955416:24,141,888...24,168,585
JBrowse link
G Otx1 orthodenticle homeobox 1 acts_upstream_of_or_within ISO (MGI:3039992|PMID:15105370) MGI PMID:15105370 MGI:3039992 NCBI chrNW_004955424:21,140,038...21,147,268
Ensembl chrNW_004955424:21,140,038...21,146,694
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (MGI:2656991|PMID:12652306)
(MGI:1197794|PMID:9501024)
(MGI:2136711|PMID:11412024)
MGI PMID:9501024 PMID:11412024 PMID:12652306 MGI:1197794 MGI:2136711 MGI:2656991 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095
JBrowse link
G Pax6 paired box 6 acts_upstream_of_or_within ISO (MGI:3578670|PMID:15917450)
(MGI:2386059|PMID:12196586)
MGI PMID:12196586 PMID:15917450 MGI:2386059 MGI:3578670 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO (MGI:2151355|PMID:11566859) MGI PMID:11566859 MGI:2151355 NCBI chrNW_004955462:11,777,168...12,083,068
Ensembl chrNW_004955462:11,812,649...12,082,316
JBrowse link
G Pcgf2 polycomb group ring finger 2 acts_upstream_of_or_within ISO (MGI:3530206|PMID:15741318)
(MGI:80640|PMID:8625838)
MGI PMID:8625838 PMID:15741318 MGI:3530206 MGI:80640 NCBI chrNW_004955451:13,817,559...13,822,342
Ensembl chrNW_004955451:13,817,559...13,832,653
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 involved_in ISO (PMID:18519639)
(MGI:3795695|PMID:18519639)
BHF-UCL PMID:18519639 MGI:3795695 NCBI chrNW_004955512:2,914,834...3,333,440
Ensembl chrNW_004955512:2,917,243...3,333,688
JBrowse link
G Pds5a PDS5 cohesin associated factor A acts_upstream_of_or_within ISO (MGI:3847057|PMID:19412548) MGI PMID:19412548 MGI:3847057 NCBI chrNW_004955443:7,475,434...7,603,548
Ensembl chrNW_004955443:7,475,385...7,604,714
JBrowse link
G Rarg retinoic acid receptor gamma acts_upstream_of_or_within ISO (MGI:2154839|PMID:11784046)
(MGI:2154839|PMID:11784046), (MGI:60925|PMID:8388780)
MGI PMID:8388780 PMID:11784046 MGI:2154839 MGI:60925 NCBI chrNW_004955458:480,257...501,172
Ensembl chrNW_004955458:480,070...501,356
JBrowse link
G Ring1 ring finger protein 1 acts_upstream_of_or_within ISO (MGI:1926247|PMID:11060235), (MGI:3628673|PMID:16624538)
(MGI:3628673|PMID:16624538)
MGI PMID:11060235 PMID:16624538 MGI:1926247 MGI:3628673 NCBI chrNW_004955437:1,782,156...1,785,811
Ensembl chrNW_004955437:1,782,115...1,788,842
JBrowse link
G Scmh1 Scm polycomb group protein homolog 1 acts_upstream_of_or_within ISO (MGI:3703453|PMID:17215307) MGI PMID:17215307 MGI:3703453 NCBI chrNW_004955537:819,209...971,297
Ensembl chrNW_004955537:824,828...937,324
JBrowse link
G Sf3b1 splicing factor 3b subunit 1 acts_upstream_of_or_within ISO (MGI:3530206|PMID:15741318) MGI PMID:15741318 MGI:3530206 NCBI chrNW_004955403:3,134,960...3,163,395
Ensembl chrNW_004955403:3,134,955...3,166,121
JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:3618960|PMID:16467359) MGI PMID:16467359 MGI:3618960 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3618960|PMID:16467359) MGI PMID:16467359 MGI:3618960 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321
JBrowse link
G Shh sonic hedgehog signaling molecule acts_upstream_of_or_within ISO (MGI:2135419|PMID:11389830)
(MGI:1928592|PMID:11118883)
MGI PMID:11118883 PMID:11389830 MGI:1928592 MGI:2135419 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO (MGI:2667288|PMID:12842913)
(MGI:1201281|PMID:9529255), (MGI:2136068|PMID:11418863)
MGI PMID:9529255 PMID:11418863 PMID:12842913 MGI:1201281 MGI:2136068 MGI:2667288 NCBI chrNW_004955402:33,131,760...33,217,144
Ensembl chrNW_004955402:33,136,778...33,216,844
JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within ISO (MGI:3051711|PMID:15215210) MGI PMID:15215210 MGI:3051711 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO (MGI:5438143|PMID:22987639) MGI PMID:22987639 MGI:5438143 NCBI chrNW_004955479:9,963,377...9,991,670
Ensembl chrNW_004955479:9,964,170...9,993,165
JBrowse link
G Tbx1 T-box transcription factor 1 acts_upstream_of_or_within ISO (MGI:3614586|PMID:16399080)
(MGI:3039048|PMID:15084464)
MGI PMID:15084464 PMID:16399080 MGI:3039048 MGI:3614586 NCBI chrNW_004955442:18,320,674...18,327,062
Ensembl chrNW_004955442:18,319,762...18,325,337
JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO (MGI:3056222|PMID:15384171) MGI PMID:15384171 MGI:3056222 NCBI chrNW_004955439:15,675,680...15,683,542
Ensembl chrNW_004955439:15,676,095...15,683,554
JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO (MGI:84545|PMID:8955271) MGI PMID:8955271 MGI:84545 NCBI chrNW_004955597:446,489...452,003
Ensembl chrNW_004955597:446,855...451,949
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 acts_upstream_of_or_within ISO (MGI:3695190|PMID:16845371) MGI PMID:16845371 MGI:3695190 NCBI chrNW_004955419:26,490,899...26,546,349
Ensembl chrNW_004955419:26,490,899...26,547,017
JBrowse link
G Tshz1 teashirt zinc finger homeobox 1 acts_upstream_of_or_within ISO (MGI:3720547|PMID:17586487) MGI PMID:17586487 MGI:3720547 NCBI chrNW_004955402:58,695,150...58,717,926 JBrowse link
G Tulp3 TUB like protein 3 acts_upstream_of_or_within ISO (MGI:3844764|PMID:19334287) MGI PMID:19334287 MGI:3844764 NCBI chrNW_004955429:18,424,912...18,484,522
Ensembl chrNW_004955429:18,453,311...18,482,400
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:3835694|PMID:18849982) MGI PMID:18849982 MGI:3835694 NCBI chrNW_004955468:12,162,084...12,189,322
Ensembl chrNW_004955468:12,161,843...12,189,547
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3044441|PMID:15148409) MGI PMID:15148409 MGI:3044441 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (MGI:3039991|PMID:15073149), (MGI:4413372|PMID:19795512) MGI PMID:15073149 PMID:19795512 MGI:3039991 MGI:4413372 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
G Yy1 YY1 transcription factor acts_upstream_of_or_within ISO (MGI:3628673|PMID:16624538) MGI PMID:16624538 MGI:3628673 NCBI chrNW_004955438:21,341,374...21,377,674 JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 acts_upstream_of_or_within ISO (MGI:1859075|PMID:10835630) MGI PMID:10835630 MGI:1859075 NCBI chrNW_004955412:15,668,332...15,845,384
Ensembl chrNW_004955412:15,668,332...15,845,372
JBrowse link
G Zic3 Zic family member 3 acts_upstream_of_or_within ISO (MGI:3624254|PMID:16496285) MGI PMID:16496285 MGI:3624254 NCBI chrNW_004955489:7,560,684...7,571,739
Ensembl chrNW_004955489:7,560,684...7,571,892
JBrowse link
anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurka aurora kinase A acts_upstream_of_or_within ISO (MGI:5449118|PMID:22939930) MGI PMID:22939930 MGI:5449118 NCBI chrNW_004955445:2,831,073...2,853,151
Ensembl chrNW_004955445:2,831,157...2,853,357
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (MGI:1889107|PMID:10964473) MGI PMID:10964473 MGI:1889107 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist acts_upstream_of_or_within ISO (MGI:3042338|PMID:15004567)
(MGI:3776330|PMID:18241853)
MGI PMID:15004567 PMID:18241853 MGI:3042338 MGI:3776330 NCBI chrNW_004955434:17,738,281...17,740,823
Ensembl chrNW_004955434:17,734,495...17,740,823
JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:1353237|PMID:10662781) MGI PMID:10662781 MGI:1353237 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Ddit3 DNA damage inducible transcript 3 involved_in ISO (MGI:4821075|PMID:16434966) BHF-UCL PMID:16434966 MGI:4821075 NCBI chrNW_004955458:5,232,979...5,238,513
Ensembl chrNW_004955458:5,232,979...5,238,513
JBrowse link
G Gpc3 glypican 3 acts_upstream_of_or_within ISO (MGI:1889107|PMID:10964473) MGI PMID:10964473 MGI:1889107 NCBI chrNW_004955473:969,627...1,431,706
Ensembl chrNW_004955473:969,800...1,431,483
JBrowse link
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO (MGI:3530185|PMID:15680351) MGI PMID:15680351 MGI:3530185 NCBI chrNW_004955444:1,498,444...1,502,099
Ensembl chrNW_004955444:1,498,675...1,500,945
JBrowse link
G Hey2 hes related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within ISO (MGI:3530185|PMID:15680351) MGI PMID:15680351 MGI:3530185 NCBI chrNW_004955436:7,060,930...7,070,610
Ensembl chrNW_004955436:7,060,930...7,070,030
JBrowse link
G Ldb1 LIM domain binding 1 acts_upstream_of_or_within ISO (MGI:2448170|PMID:12490556) MGI PMID:12490556 MGI:2448170 NCBI chrNW_004955485:8,229,517...8,242,003
Ensembl chrNW_004955485:8,229,517...8,241,142
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (MGI:1346311|PMID:10529425) MGI PMID:10529425 MGI:1346311 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2155575|PMID:11311163) MGI PMID:11311163 MGI:2155575 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628
JBrowse link
G Pgap1 post-GPI attachment to proteins inositol deacylase 1 acts_upstream_of_or_within ISO (MGI:1346311|PMID:10529425) MGI PMID:10529425 MGI:1346311 NCBI chrNW_004955403:3,527,398...3,582,004
Ensembl chrNW_004955403:3,527,138...3,582,004
JBrowse link
G Rnf2 ring finger protein 2 acts_upstream_of_or_within ISO (MGI:2389282|PMID:12183370) MGI PMID:12183370 MGI:2389282 NCBI chrNW_004955406:23,672,947...23,725,253 JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:3794506|PMID:18321982) UniProt PMID:18321982 MGI:3794506 NCBI chrNW_004955441:12,029,530...12,033,214
Ensembl chrNW_004955441:12,029,480...12,033,214
JBrowse link
G Ski SKI proto-oncogene acts_upstream_of_or_within ISO (MGI:2176418|PMID:11731796) MGI PMID:11731796 MGI:2176418 NCBI chrNW_004955486:8,857,693...8,921,821
Ensembl chrNW_004955486:8,857,693...8,921,821
JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO (MGI:3044041|PMID:15155583) MGI PMID:15155583 MGI:3044041 NCBI chrNW_004955411:12,194,560...12,232,374
Ensembl chrNW_004955411:12,194,550...12,232,374
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO (MGI:3776330|PMID:18241853) MGI PMID:18241853 MGI:3776330 NCBI chrNW_004955420:25,476,975...25,479,969
Ensembl chrNW_004955420:25,477,122...25,479,969
JBrowse link
G Wls Wnt ligand secretion mediator involved_in ISO (MGI:4397730|PMID:19841259) UniProt PMID:19841259 MGI:4397730 NCBI chrNW_004955423:23,374,401...23,465,308
Ensembl chrNW_004955423:23,374,401...23,466,475
JBrowse link
anterior/posterior axis specification, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 acts_upstream_of_or_within ISO (MGI:3580203|PMID:15870281) MGI PMID:15870281 MGI:3580203 NCBI chrNW_004955405:9,785,857...9,884,220
Ensembl chrNW_004955405:9,843,925...9,884,220
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO (PMID:9054360) BHF-UCL PMID:9054360 NCBI chrNW_004955457:7,282,403...7,288,918
Ensembl chrNW_004955457:7,282,403...7,288,918
JBrowse link
G Tasor transcription activation suppressor involved_in ISO (MGI:6109647|PMID:28839193) UniProt PMID:28839193 MGI:6109647 NCBI chrNW_004955430:6,440,655...6,480,956
Ensembl chrNW_004955430:6,442,084...6,480,802
JBrowse link
G Tbx3 T-box transcription factor 3 involved_in ISO (PMID:9207801) UniProt PMID:9207801 NCBI chrNW_004955455:15,988,153...16,000,156
Ensembl chrNW_004955455:15,988,663...16,000,063
JBrowse link
G Tcf7l1 transcription factor 7 like 1 acts_upstream_of_or_within ISO (MGI:3043490|PMID:14668413) MGI PMID:14668413 MGI:3043490 NCBI chrNW_004955424:2,139,576...2,286,183
Ensembl chrNW_004955424:2,137,865...2,286,181
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 acts_upstream_of_or_within ISO (MGI:1303194|PMID:9790191) MGI PMID:9790191 MGI:1303194 NCBI chrNW_004955420:25,476,975...25,479,969
Ensembl chrNW_004955420:25,477,122...25,479,969
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4835157|PMID:9054360) BHF-UCL PMID:9054360 MGI:4835157 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
axis elongation involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:1891551|PMID:11029008) MGI PMID:11029008 MGI:1891551 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO (MGI:4839483|PMID:20630950) MGI PMID:20630950 MGI:4839483 NCBI chrNW_004955475:10,687,168...10,710,286
Ensembl chrNW_004955475:10,687,367...10,710,053
JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:1891551|PMID:11029008) MGI PMID:11029008 MGI:1891551 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541
JBrowse link
compartment pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of_or_within ISO (MGI:2181244|PMID:12001066) MGI PMID:12001066 MGI:2181244 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Dll3 delta like canonical Notch ligand 3 acts_upstream_of_or_within ISO (MGI:2181244|PMID:12001066) MGI PMID:12001066 MGI:2181244 NCBI chrNW_004955468:70,714...78,831
Ensembl chrNW_004955468:71,004...78,827
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO (MGI:2181244|PMID:12001066) MGI PMID:12001066 MGI:2181244 NCBI chrNW_004955460:12,773,975...12,784,512
Ensembl chrNW_004955460:12,773,975...12,784,512
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:2181244|PMID:12001066) MGI PMID:12001066 MGI:2181244 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
convergent extension involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514
JBrowse link
embryonic heart tube anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within ISO (MGI:3611958|PMID:16314491) MGI PMID:16314491 MGI:3611958 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Foxh1 forkhead box H1 acts_upstream_of_or_within ISO (MGI:3055632|PMID:15363409) MGI PMID:15363409 MGI:3055632 NCBI chrNW_004955454:3,094,015...3,096,060
Ensembl chrNW_004955454:3,094,033...3,095,512
JBrowse link
G Gata4 GATA binding protein 4 acts_upstream_of_or_within ISO (MGI:87488|PMID:9136932) MGI PMID:9136932 MGI:87488 NCBI chrNW_004955403:52,958,318...53,029,267
Ensembl chrNW_004955403:52,987,644...53,029,267
JBrowse link
epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2677178|PMID:14511481) MGI PMID:14511481 MGI:2677178 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628
JBrowse link
fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nog noggin involved_in ISO (PMID:8582276) BHF-UCL PMID:8582276 NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740
JBrowse link
forebrain anterior/posterior pattern specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fezf1 FEZ family zinc finger 1 acts_upstream_of_or_within ISO (MGI:3702790|PMID:16971467) MGI PMID:16971467 MGI:3702790 NCBI chrNW_004955479:3,945,358...3,953,924
Ensembl chrNW_004955479:3,945,292...3,951,847
JBrowse link
G Fezf2 FEZ family zinc finger 2 acts_upstream_of_or_within ISO (MGI:3702790|PMID:16971467) MGI PMID:16971467 MGI:3702790 NCBI chrNW_004955517:3,439,999...3,443,477
Ensembl chrNW_004955517:3,439,999...3,443,846
JBrowse link
G Six3 SIX homeobox 3 acts_upstream_of_or_within ISO (MGI:3772426|PMID:18094027) MGI PMID:18094027 MGI:3772426 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:3772426|PMID:18094027) MGI PMID:18094027 MGI:3772426 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167
JBrowse link
forebrain-midbrain boundary formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pax6 paired box 6 acts_upstream_of_or_within ISO (MGI:892757|PMID:9169845) MGI PMID:9169845 MGI:892757 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:4360856|PMID:19686689)
(MGI:4361775|PMID:19805295)
MGI PMID:19686689 PMID:19805295 MGI:4360856 MGI:4361775 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Wnt2 Wnt family member 2 acts_upstream_of_or_within ISO (MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:4360856 NCBI chrNW_004955432:22,988,208...23,024,530
Ensembl chrNW_004955432:22,984,170...23,027,705
JBrowse link
G Wnt2b Wnt family member 2B acts_upstream_of_or_within ISO (MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:4360856 NCBI chrNW_004955435:15,948,262...15,962,958
Ensembl chrNW_004955435:15,948,262...15,962,958
JBrowse link
midbrain-hindbrain boundary development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G En1 engrailed homeobox 1 acts_upstream_of_or_within ISO (MGI:3525936|PMID:15607945) MGI PMID:15607945 MGI:3525936 NCBI chrNW_004955459:10,839,581...10,844,198 JBrowse link
G Fgf8 fibroblast growth factor 8 acts_upstream_of_or_within ISO (MGI:3720541|PMID:17601531) MGI PMID:17601531 MGI:3720541 NCBI chrNW_004955485:8,517,412...8,521,732
Ensembl chrNW_004955485:8,517,412...8,521,770
JBrowse link
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (MGI:3624192|PMID:16651541) MGI PMID:16651541 MGI:3624192 NCBI chrNW_004955453:538,066...541,415
Ensembl chrNW_004955453:538,280...540,306
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:1891551|PMID:11029008), (MGI:4413372|PMID:19795512) MGI PMID:11029008 PMID:19795512 MGI:1891551 MGI:4413372 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:59176|PMID:2205396) MGI PMID:2205396 MGI:59176 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167
JBrowse link
midbrain-hindbrain boundary initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ssbp3 single stranded DNA binding protein 3 involved_in ISO (MGI:3578570|PMID:15857913) UniProt PMID:15857913 MGI:3578570 NCBI chrNW_004955464:4,901,150...5,049,341
Ensembl chrNW_004955464:4,901,151...5,047,656
JBrowse link
midbrain-hindbrain boundary maturation during brain development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:76584|PMID:8555108) MGI PMID:8555108 MGI:76584 NCBI chrNW_004955500:7,797,063...7,811,142
Ensembl chrNW_004955500:7,797,060...7,811,167
JBrowse link
midbrain-hindbrain boundary morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbx2 gastrulation brain homeobox 2 acts_upstream_of_or_within ISO (MGI:3624192|PMID:16651541) MGI PMID:16651541 MGI:3624192 NCBI chrNW_004955453:538,066...541,415
Ensembl chrNW_004955453:538,280...540,306
JBrowse link
G Hes1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:2149154|PMID:11500373) MGI PMID:11500373 MGI:2149154 NCBI chrNW_004955420:14,565,921...14,568,447
Ensembl chrNW_004955420:14,564,283...14,568,447
JBrowse link
G Hes3 hes family bHLH transcription factor 3 acts_upstream_of_or_within ISO (MGI:2149134|PMID:11522634) MGI PMID:11522634 MGI:2149134 NCBI chrNW_004955486:6,272,757...6,273,721
Ensembl chrNW_004955486:6,272,757...6,273,721
JBrowse link
G Kdm2b lysine demethylase 2B involved_in ISO (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chrNW_004955482:6,774,021...6,885,113
Ensembl chrNW_004955482:6,774,059...6,887,171
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx18 T-box transcription factor 18 involved_in ISO (MGI:3722519|PMID:17584735) BHF-UCL PMID:17584735 MGI:3722519 NCBI chrNW_004955411:12,194,560...12,232,374
Ensembl chrNW_004955411:12,194,550...12,232,374
JBrowse link
negative regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuz fuzzy planar cell polarity protein involved_in ISO (MGI:5498583|PMID:23806618) UniProt PMID:23806618 MGI:5498583 NCBI chrNW_004955559:1,112,670...1,117,620
Ensembl chrNW_004955559:1,112,855...1,117,413
JBrowse link
G Ofd1 OFD1 centriole and centriolar satellite protein involved_in ISO (MGI:5498583|PMID:23806618) UniProt PMID:23806618 MGI:5498583 NCBI chrNW_004955519:4,433,747...4,470,842
Ensembl chrNW_004955519:4,433,855...4,471,070
JBrowse link
negative regulation of Notch signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in ISO (MGI:5545944|PMID:23072809) UniProt PMID:23072809 MGI:5545944 NCBI chrNW_004955460:12,773,975...12,784,512
Ensembl chrNW_004955460:12,773,975...12,784,512
JBrowse link
neural plate anterior/posterior regionalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr2 cadherin EGF LAG seven-pass G-type receptor 2 involved_in ISO (MGI:3765258|PMID:12755329) BHF-UCL PMID:12755329 MGI:3765258 NCBI chrNW_004955435:12,671,759...12,695,070
Ensembl chrNW_004955435:12,671,759...12,695,564
JBrowse link
P granule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pld6 phospholipase D family member 6 involved_in ISO (MGI:4943609|PMID:21397848) UniProt PMID:21397848 MGI:4943609 NCBI chrNW_004955577:698,741...702,977 JBrowse link
G Tdrd5 tudor domain containing 5 involved_in ISO (MGI:4946318|PMID:21383078) UniProt PMID:21383078 MGI:4946318 NCBI chrNW_004955406:18,895,010...18,961,200
Ensembl chrNW_004955406:18,895,011...18,962,333
JBrowse link
polarity specification of anterior/posterior axis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule involved_in ISO (MGI:5559673|PMID:11044396) Roslin_Institute PMID:11044396 MGI:5559673 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Wnt8a Wnt family member 8A acts_upstream_of_or_within ISO (MGI:3609071|PMID:16256739) MGI PMID:16256739 MGI:3609071 NCBI chrNW_004955418:2,332,636...2,338,099
Ensembl chrNW_004955418:2,332,636...2,338,085
JBrowse link
primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ets2 ETS proto-oncogene 2, transcription factor acts_upstream_of_or_within ISO (MGI:5546318|PMID:23552073) MGI PMID:23552073 MGI:5546318 NCBI chrNW_004955407:37,747,152...37,764,170
Ensembl chrNW_004955407:37,747,000...37,765,237
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255
JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within ISO (MGI:3611720|PMID:16368929) MGI PMID:16368929 MGI:3611720 NCBI chrNW_004955413:6,493,734...6,516,315 JBrowse link
G Hhex hematopoietically expressed homeobox acts_upstream_of_or_within ISO (MGI:4950786|PMID:21445260) MGI PMID:21445260 MGI:4950786 NCBI chrNW_004955425:737,506...742,775
Ensembl chrNW_004955425:735,378...742,775
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
JBrowse link
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:4950786|PMID:21445260) MGI PMID:21445260 MGI:4950786 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628
JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095
JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO (MGI:1312998|PMID:9799237) MGI PMID:9799237 MGI:1312998 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
regulation of cell migration involved in somitogenic axis elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha involved_in ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chrNW_004955501:2,648,017...2,751,999
Ensembl chrNW_004955501:2,648,017...2,752,057
JBrowse link
regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nog noggin involved_in ISO (PMID:8582276) BHF-UCL PMID:8582276 NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740
JBrowse link
regulation of somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdx1 caudal type homeobox 1 involved_in ISO (MGI:5301472|PMID:22015720) UniProt PMID:22015720 MGI:5301472 NCBI chrNW_004955415:4,337,903...4,355,782
Ensembl chrNW_004955415:4,337,903...4,355,782
JBrowse link
G Cdx2 caudal type homeobox 2 involved_in ISO (MGI:5301472|PMID:22015720) UniProt PMID:22015720 MGI:5301472 NCBI chrNW_004955497:7,316,372...7,321,627 JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISO (MGI:5689216|PMID:26114479) UniProt PMID:26114479 MGI:5689216 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Dmrt2 doublesex and mab-3 related transcription factor 2 acts_upstream_of_or_within ISO (MGI:3820487|PMID:17974128) MGI PMID:17974128 MGI:3820487 NCBI chrNW_004955434:5,528,625...5,535,783 JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within
ISO (PMID:19061953)
(MGI:4367298|PMID:19779553)
UniProt
MGI
PMID:19061953 PMID:19779553 MGI:4367298 NCBI chrNW_004955460:12,773,975...12,784,512
Ensembl chrNW_004955460:12,773,975...12,784,512
JBrowse link
G Notch1 notch receptor 1 acts_upstream_of_or_within ISO (MGI:72973|PMID:7789282) MGI PMID:7789282 MGI:72973 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
G Pax3 paired box 3 acts_upstream_of_or_within ISO (MGI:3820487|PMID:17974128) MGI PMID:17974128 MGI:3820487 NCBI chrNW_004955453:11,463,407...11,558,001
Ensembl chrNW_004955453:11,463,379...11,558,006
JBrowse link
retinoic acid receptor signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within ISO (MGI:3578715|PMID:15889094) MGI PMID:15889094 MGI:3578715 NCBI chrNW_004955450:16,406,578...16,453,048
Ensembl chrNW_004955450:16,406,436...16,453,180
JBrowse link
rostrocaudal neural tube patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6ap2 ATPase H+ transporting accessory protein 2 involved_in ISO (PMID:20093472) UniProt PMID:20093472 NCBI chrNW_004955565:2,006,154...2,029,921 JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger acts_upstream_of_or_within ISO (MGI:82985|PMID:8887324) MGI PMID:8887324 MGI:82985 NCBI chrNW_004955429:6,548,586...6,553,730 JBrowse link
G Sox17 SRY-box transcription factor 17 acts_upstream_of_or_within ISO (MGI:4421275|PMID:19913509) MGI PMID:19913509 MGI:4421275 NCBI chrNW_004955454:13,689,403...13,690,019 JBrowse link
somite rostral/caudal axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:3821807|PMID:18794329) MGI PMID:18794329 MGI:3821807 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173
JBrowse link
G Foxa2 forkhead box A2 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chrNW_004955415:29,982,940...29,987,093
Ensembl chrNW_004955415:29,982,940...29,986,255
JBrowse link
G Gdf3 growth differentiation factor 3 acts_upstream_of_or_within ISO (MGI:3611720|PMID:16368929) MGI PMID:16368929 MGI:3611720 NCBI chrNW_004955413:6,493,734...6,516,315 JBrowse link
G Kdm6a lysine demethylase 6A acts_upstream_of_or_within ISO (MGI:5448135|PMID:22949634) MGI PMID:22949634 MGI:5448135 NCBI chrNW_004955516:3,151,350...3,346,832
Ensembl chrNW_004955516:3,149,948...3,346,832
JBrowse link
G Lhx1 LIM homeobox 1 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 acts_upstream_of_or_within ISO (MGI:4459001|PMID:20346937) MGI PMID:20346937 MGI:4459001 NCBI chrNW_004955416:15,447,959...15,450,209 JBrowse link
G Otx2 orthodenticle homeobox 2 acts_upstream_of_or_within ISO (MGI:2157654|PMID:11291865) MGI PMID:11291865 MGI:2157654 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095
JBrowse link
G Ripply1 ripply transcriptional repressor 1 acts_upstream_of_or_within ISO (MGI:4459001|PMID:20346937) MGI PMID:20346937 MGI:4459001 NCBI chrNW_004955490:9,167,071...9,172,101
Ensembl chrNW_004955490:9,167,183...9,169,773
JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within
involved_in
ISO (MGI:4459001|PMID:20346937)
(MGI:3613215|PMID:16326386)
MGI
UniProt
PMID:16326386 PMID:20346937 MGI:3613215 MGI:4459001 NCBI chrNW_004955411:11,418,744...11,422,766 JBrowse link
G Smad4 SMAD family member 4 acts_upstream_of_or_within ISO (MGI:1195384|PMID:9420335) MGI PMID:9420335 MGI:1195384 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
JBrowse link
G Tbx6 T-box transcription factor 6 acts_upstream_of_or_within ISO (MGI:4459001|PMID:20346937) MGI PMID:20346937 MGI:4459001 NCBI chrNW_004955493:6,888,832...6,894,840
Ensembl chrNW_004955493:6,888,832...6,894,831
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (MGI:4453264|PMID:20178780) MGI PMID:20178780 MGI:4453264 NCBI chrNW_004955482:5,404,739...5,415,243
Ensembl chrNW_004955482:5,404,739...5,415,243
JBrowse link
somite specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 acts_upstream_of_or_within ISO (MGI:3034157|PMID:14960495) MGI PMID:14960495 MGI:3034157 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Meox1 mesenchyme homeobox 1 acts_upstream_of_or_within ISO (MGI:2669571|PMID:12925591) MGI PMID:12925591 MGI:2669571 NCBI chrNW_004955451:17,013,180...17,022,131
Ensembl chrNW_004955451:17,012,982...17,022,186
JBrowse link
G Meox2 mesenchyme homeobox 2 acts_upstream_of_or_within ISO (MGI:2669571|PMID:12925591) MGI PMID:12925591 MGI:2669571 NCBI chrNW_004955410:18,924,669...18,988,478
Ensembl chrNW_004955410:18,924,605...18,988,478
JBrowse link
somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi1 abl interactor 1 acts_upstream_of_or_within ISO (MGI:3577662|PMID:15755804) MGI PMID:15755804 MGI:3577662 NCBI chrNW_004955429:2,682,341...2,783,752
Ensembl chrNW_004955429:2,682,343...2,783,752
JBrowse link
G Atm ATM serine/threonine kinase acts_upstream_of_or_within ISO (MGI:3624894|PMID:16687486) MGI PMID:16687486 MGI:3624894 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Axin2 axin 2 acts_upstream_of_or_within ISO (MGI:3037351|PMID:12636920) MGI PMID:12636920 MGI:3037351 NCBI chrNW_004955478:4,952,551...4,982,223
Ensembl chrNW_004955478:4,952,488...4,982,225
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (MGI:3702797|PMID:16943278) MGI PMID:16943278 MGI:3702797 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312
JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (MGI:5296388|PMID:22072575) UniProt PMID:22072575 MGI:5296388 NCBI chrNW_004955419:4,604,883...4,626,675
Ensembl chrNW_004955419:4,607,507...4,626,608
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in
acts_upstream_of_or_within
ISO (MGI:5545944|PMID:23072809)
(MGI:3578712|PMID:15902259)
UniProt
MGI
PMID:15902259 PMID:23072809 MGI:3578712 MGI:5545944 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Dll3 delta like canonical Notch ligand 3 acts_upstream_of_or_within ISO (MGI:1095777|PMID:9272948)
(MGI:3620337|PMID:15170697)
MGI PMID:9272948 PMID:15170697 MGI:1095777 MGI:3620337 NCBI chrNW_004955468:70,714...78,831
Ensembl chrNW_004955468:71,004...78,827
JBrowse link
G Ep300 E1A binding protein p300 acts_upstream_of_or_within ISO (MGI:3583034|PMID:15937931) MGI PMID:15937931 MGI:3583034 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Epb41l5 erythrocyte membrane protein band 4.1 like 5 acts_upstream_of_or_within ISO (MGI:3821807|PMID:18794329) MGI PMID:18794329 MGI:3821807 NCBI chrNW_004955459:9,641,926...9,783,718
Ensembl chrNW_004955459:9,641,884...9,784,173
JBrowse link
G Foxb1 forkhead box B1 involved_in ISO (MGI:3771770|PMID:18064677) UniProt PMID:18064677 MGI:3771770 NCBI chrNW_004955450:14,867,941...14,902,990 JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO (MGI:1928688|PMID:11124112) MGI PMID:11124112 MGI:1928688 NCBI chrNW_004955541:1,341,715...1,345,397
Ensembl chrNW_004955541:1,317,114...1,346,590
JBrowse link
G Hes7 hes family bHLH transcription factor 7 acts_upstream_of_or_within ISO (MGI:3046002|PMID:15170214)
(MGI:2152470|PMID:11641270), (MGI:4367298|PMID:19779553)
MGI PMID:11641270 PMID:15170214 PMID:19779553 MGI:2152470 MGI:3046002 MGI:4367298 NCBI chrNW_004955467:8,837,895...8,841,062
Ensembl chrNW_004955467:8,837,886...8,841,739
JBrowse link
G Kat2a lysine acetyltransferase 2A acts_upstream_of_or_within ISO (MGI:3583034|PMID:15937931)
(MGI:3709911|PMID:17325035)
MGI PMID:15937931 PMID:17325035 MGI:3583034 MGI:3709911 NCBI chrNW_004955451:16,192,228...16,197,103
Ensembl chrNW_004955451:16,191,186...16,197,574
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within ISO (MGI:1334099|PMID:10090727)
(MGI:3510574|PMID:15545629)
MGI PMID:10090727 PMID:15545629 MGI:1334099 MGI:3510574 NCBI chrNW_004955496:1,728,840...1,827,749
Ensembl chrNW_004955496:1,728,840...1,828,698
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within
ISO (MGI:5545944|PMID:23072809)
(MGI:3774705|PMID:18234727)
UniProt
MGI
PMID:18234727 PMID:23072809 MGI:3774705 MGI:5545944 NCBI chrNW_004955460:12,773,975...12,784,512
Ensembl chrNW_004955460:12,773,975...12,784,512
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
JBrowse link
G Med12 mediator complex subunit 12 acts_upstream_of_or_within ISO (MGI:4839544|PMID:20589884) MGI PMID:20589884 MGI:4839544 NCBI chrNW_004955475:10,687,168...10,710,286
Ensembl chrNW_004955475:10,687,367...10,710,053
JBrowse link
G Mesp2 mesoderm posterior bHLH transcription factor 2 acts_upstream_of_or_within ISO (MGI:3578712|PMID:15902259) MGI PMID:15902259 MGI:3578712 NCBI chrNW_004955416:15,447,959...15,450,209 JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (MGI:3603078|PMID:16000382) MGI PMID:16000382 MGI:3603078 NCBI chrNW_004955402:10,392,308...10,502,576
Ensembl chrNW_004955402:10,392,308...10,502,576
JBrowse link
G Msgn1 mesogenin 1 acts_upstream_of_or_within ISO (MGI:1928575|PMID:11124811), (MGI:5545970|PMID:21750544) MGI PMID:11124811 PMID:21750544 MGI:1928575 MGI:5545970 NCBI chrNW_004955469:617,029...617,610
Ensembl chrNW_004955469:617,029...617,610
JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO (MGI:3849775|PMID:19531352)
(MGI:1861090|PMID:10929709)
(MGI:78390|PMID:8565825)
MGI PMID:8565825 PMID:10929709 PMID:19531352 MGI:1861090 MGI:3849775 MGI:78390 NCBI chrNW_004955405:19,345,943...19,348,453
Ensembl chrNW_004955405:19,345,943...19,348,453
JBrowse link
G Myf6 myogenic factor 6 acts_upstream_of_or_within ISO (MGI:76810|PMID:7588068) MGI PMID:7588068 MGI:76810 NCBI chrNW_004955405:19,336,798...19,338,610
Ensembl chrNW_004955405:19,336,718...19,338,670
JBrowse link
G Nckap1 NCK associated protein 1 acts_upstream_of_or_within ISO (MGI:3701029|PMID:16831833) MGI PMID:16831833 MGI:3701029 NCBI chrNW_004955403:14,476,689...14,554,380
Ensembl chrNW_004955403:14,480,162...14,554,702
JBrowse link
G Nkx3-1 NK3 homeobox 1 acts_upstream_of_or_within ISO (PMID:9621431) BHF-UCL PMID:9621431 NCBI chrNW_004955403:46,807,846...46,809,924
Ensembl chrNW_004955403:46,806,178...46,836,310
JBrowse link
G Nle1 notchless homolog 1 acts_upstream_of_or_within ISO (MGI:5608942|PMID:24875805) MGI PMID:24875805 MGI:5608942 NCBI chrNW_004955481:9,821,329...9,830,350
Ensembl chrNW_004955481:9,821,329...9,830,555
JBrowse link
G Palb2 partner and localizer of BRCA2 acts_upstream_of_or_within ISO (MGI:4459579|PMID:20484223) MGI PMID:20484223 MGI:4459579 NCBI chrNW_004955493:2,149,053...2,175,482
Ensembl chrNW_004955493:2,147,862...2,175,781
JBrowse link
G Pax1 paired box 1 acts_upstream_of_or_within ISO (MGI:3590033|PMID:16093716) MGI PMID:16093716 MGI:3590033 NCBI chrNW_004955415:29,413,253...29,420,682
Ensembl chrNW_004955415:29,413,253...29,420,682
JBrowse link
G Pcdh8 protocadherin 8 acts_upstream_of_or_within ISO (MGI:2451199|PMID:12591245) MGI PMID:12591245 MGI:2451199 NCBI chrNW_004955404:50,403,752...50,413,264 JBrowse link
G Plxna2 plexin A2 acts_upstream_of_or_within ISO (PMID:19666519) BHF-UCL PMID:19666519 NCBI chrNW_004955489:3,914,137...4,116,780
Ensembl chrNW_004955489:3,914,633...4,116,825
JBrowse link
G Pofut1 protein O-fucosyltransferase 1 acts_upstream_of_or_within ISO (MGI:2660984|PMID:12697902) MGI PMID:12697902 MGI:2660984 NCBI chrNW_004955422:28,809,901...28,833,186
Ensembl chrNW_004955422:28,809,901...28,833,186
JBrowse link
G Poglut1 protein O-glucosyltransferase 1 acts_upstream_of_or_within ISO (MGI:1267118|PMID:9636176) MGI PMID:9636176 MGI:1267118 NCBI chrNW_004955427:19,188,512...19,206,050
Ensembl chrNW_004955427:19,188,183...19,206,050
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit acts_upstream_of_or_within ISO (MGI:3624894|PMID:16687486) MGI PMID:16687486 MGI:3624894 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Psen1 presenilin 1 acts_upstream_of_or_within ISO (MGI:1347695|PMID:10557208), (MGI:4367298|PMID:19779553)
(MGI:87649|PMID:9153393)
MGI PMID:9153393 PMID:10557208 PMID:19779553 MGI:1347695 MGI:4367298 MGI:87649 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO (MGI:1347695|PMID:10557208), (MGI:4367298|PMID:19779553) MGI PMID:10557208 PMID:19779553 MGI:1347695 MGI:4367298 NCBI chrNW_004955406:5,727,367...5,748,798
Ensembl chrNW_004955406:5,727,367...5,752,234
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region acts_upstream_of_or_within ISO (MGI:4367298|PMID:19779553) MGI PMID:19779553 MGI:4367298 NCBI chrNW_004955443:18,783,061...19,029,441
Ensembl chrNW_004955443:18,783,061...18,910,228
JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within
involved_in
ISO (MGI:3715395|PMID:17531978)
(MGI:3613215|PMID:16326386)
MGI
UniProt
PMID:16326386 PMID:17531978 MGI:3613215 MGI:3715395 NCBI chrNW_004955411:11,418,744...11,422,766 JBrowse link
G Ror2 receptor tyrosine kinase like orphan receptor 2 acts_upstream_of_or_within ISO (MGI:3037488|PMID:14745966) MGI PMID:14745966 MGI:3037488 NCBI chrNW_004955515:313,612...554,751
Ensembl chrNW_004955515:313,604...553,774
JBrowse link
G Sema3c semaphorin 3C acts_upstream_of_or_within ISO (PMID:19666519) BHF-UCL PMID:19666519 NCBI chrNW_004955410:4,795,658...4,953,460
Ensembl chrNW_004955410:4,794,477...4,954,906
JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:3618960|PMID:16467359)
(PMID:10654605)
MGI
BHF-UCL
PMID:10654605 PMID:16467359 MGI:3618960 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3618960|PMID:16467359) MGI PMID:16467359 MGI:3618960 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321
JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO (MGI:3618021|PMID:15183723) MGI PMID:15183723 MGI:3618021 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
G Tbx18 T-box transcription factor 18 acts_upstream_of_or_within ISO (MGI:3044041|PMID:15155583) MGI PMID:15155583 MGI:3044041 NCBI chrNW_004955411:12,194,560...12,232,374
Ensembl chrNW_004955411:12,194,550...12,232,374
JBrowse link
G Tbxt T-box transcription factor T acts_upstream_of_or_within ISO (MGI:3056222|PMID:15384171)
(MGI:3701028|PMID:16835439)
(MGI:64493|PMID:8293872)
MGI PMID:8293872 PMID:15384171 PMID:16835439 MGI:3056222 MGI:3701028 MGI:64493 NCBI chrNW_004955439:15,675,680...15,683,542
Ensembl chrNW_004955439:15,676,095...15,683,554
JBrowse link
G Tcap titin-cap acts_upstream_of_or_within ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chrNW_004955451:14,413,657...14,414,735
Ensembl chrNW_004955451:14,413,657...14,414,735
JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO (MGI:84545|PMID:8955271) MGI PMID:8955271 MGI:84545 NCBI chrNW_004955597:446,489...452,003
Ensembl chrNW_004955597:446,855...451,949
JBrowse link
G Tmed2 transmembrane p24 trafficking protein 2 acts_upstream_of_or_within ISO (MGI:4453264|PMID:20178780) MGI PMID:20178780 MGI:4453264 NCBI chrNW_004955482:5,404,739...5,415,243
Ensembl chrNW_004955482:5,404,739...5,415,243
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:3709913|PMID:17320900) MGI PMID:17320900 MGI:3709913 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Ttn titin acts_upstream_of_or_within ISO (PMID:9817758) BHF-UCL PMID:9817758 NCBI chrNW_004955403:18,057,344...18,328,389 JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO (MGI:3037351|PMID:12636920)
(MGI:3611726|PMID:16291790), (MGI:64780|PMID:8299937)
MGI PMID:8299937 PMID:12636920 PMID:16291790 MGI:3037351 MGI:3611726 MGI:64780 NCBI chrNW_004955581:351,375...382,541
Ensembl chrNW_004955581:350,889...382,541
JBrowse link
G Wnt5a Wnt family member 5A acts_upstream_of_or_within ISO (MGI:4413372|PMID:19795512) MGI PMID:19795512 MGI:4413372 NCBI chrNW_004955430:5,304,817...5,325,684
Ensembl chrNW_004955430:5,304,745...5,325,684
JBrowse link
G Xrcc2 X-ray repair cross complementing 2 acts_upstream_of_or_within ISO (MGI:3708426|PMID:17116431) MGI PMID:17116431 MGI:3708426 NCBI chrNW_004955491:6,579,443...6,629,410
Ensembl chrNW_004955491:6,599,085...6,629,439
JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 acts_upstream_of_or_within ISO (MGI:3590396|PMID:16157277), (MGI:3624924|PMID:16598713) MGI PMID:16157277 PMID:16598713 MGI:3590396 MGI:3624924 NCBI chrNW_004955440:10,755,658...10,881,044
Ensembl chrNW_004955440:10,756,014...10,795,491
JBrowse link
specification of anterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
specification of posterior mesonephric tubule identity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Osr1 odd-skipped related transcription factor 1 involved_in ISO (MGI:3697513|PMID:16790474) UniProt PMID:16790474 MGI:3697513 NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
JBrowse link
specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:10706139), (PMID:17118062) UniProt PMID:10706139 PMID:17118062 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
spinal cord anterior/posterior patterning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf11 growth differentiation factor 11 acts_upstream_of_or_within ISO (MGI:3701017|PMID:16790475) MGI PMID:16790475 MGI:3701017 NCBI chrNW_004955458:3,388,402...3,398,040
Ensembl chrNW_004955458:3,388,402...3,398,040
JBrowse link
thorax and anterior abdomen determination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Neurog1 neurogenin 1 involved_in ISO (PMID:23419067) CAFA PMID:23419067 NCBI chrNW_004955408:30,693,893...30,695,453
Ensembl chrNW_004955408:30,694,496...30,695,221
JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (MGI:62488|PMID:8395349) UniProt PMID:8395349 MGI:62488 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
transforming growth factor beta receptor signaling pathway involved in primitive streak formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nodal nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:2677178|PMID:14511481) MGI PMID:14511481 MGI:2677178 NCBI chrNW_004955437:20,828,448...20,835,486
Ensembl chrNW_004955437:20,828,448...20,835,628
JBrowse link
Wnt signaling pathway involved in somitogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chrNW_004955425:7,353,964...7,357,599 JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:3055483|PMID:15469977) MGI PMID:15469977 MGI:3055483 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
JBrowse link
G Sfrp1 secreted frizzled related protein 1 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chrNW_004955536:1,663,721...1,702,678
Ensembl chrNW_004955536:1,663,344...1,703,514
JBrowse link
G Sfrp2 secreted frizzled related protein 2 acts_upstream_of_or_within ISO (MGI:3793375|PMID:18257070) MGI PMID:18257070 MGI:3793375 NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321
JBrowse link
zona limitans intrathalamica formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shh sonic hedgehog signaling molecule ISO RGD PMID:25281935 RGD:12832757 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
zygotic determination of anterior/posterior axis, embryo term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nckap1 NCK associated protein 1 acts_upstream_of_or_within ISO (MGI:3701029|PMID:16831833) MGI PMID:16831833 MGI:3701029 NCBI chrNW_004955403:14,476,689...14,554,380
Ensembl chrNW_004955403:14,480,162...14,554,702
JBrowse link
G Pcsk6 proprotein convertase subtilisin/kexin type 6 acts_upstream_of_or_within ISO (MGI:1858546|PMID:10809672) MGI PMID:10809672 MGI:1858546 NCBI chrNW_004955416:28,184,768...28,314,697
Ensembl chrNW_004955416:28,184,768...28,314,759
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11952
    multicellular organismal process 6213
      pattern specification process 439
        regionalization 350
          anterior/posterior pattern specification 208
            anterior region determination 0
            anterior/posterior axis specification + 47
            anterior/posterior pattern specification involved in kidney development + 2
            anterior/posterior pattern specification, imaginal disc + 0
            compartment pattern specification + 4
            embryonic heart tube anterior/posterior pattern specification + 3
            forebrain anterior/posterior pattern specification 4
            foregut regionalization + 3
            neural plate anterior/posterior regionalization + 6
            periodic partitioning by pair rule gene 0
            posterior abdomen determination + 0
            rostrocaudal neural tube patterning + 14
            somitogenesis + 70
            spinal cord anterior/posterior patterning + 1
            thorax and anterior abdomen determination + 2
Path 2
Term Annotations click to browse term
  biological_process 11952
    developmental process 5657
      anatomical structure development 5288
        multicellular organism development 4844
          pattern specification process 439
            regionalization 350
              anterior/posterior pattern specification 208
                anterior region determination 0
                anterior/posterior axis specification + 47
                anterior/posterior pattern specification involved in kidney development + 2
                anterior/posterior pattern specification, imaginal disc + 0
                compartment pattern specification + 4
                embryonic heart tube anterior/posterior pattern specification + 3
                forebrain anterior/posterior pattern specification 4
                foregut regionalization + 3
                neural plate anterior/posterior regionalization + 6
                periodic partitioning by pair rule gene 0
                posterior abdomen determination + 0
                rostrocaudal neural tube patterning + 14
                somitogenesis + 70
                spinal cord anterior/posterior patterning + 1
                thorax and anterior abdomen determination + 2
paths to the root