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ONTOLOGY REPORT - ANNOTATIONS


Term:dorsal/ventral axis specification
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Accession:GO:0009950 term browser browse the term
Definition:The establishment, maintenance and elaboration of the dorsal/ventral axis. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.
Synonyms:exact_synonym: dorsoventral axis specification
 related_synonym: dorsal/ventral axis determination



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dorsal/ventral axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 acts_upstream_of_or_within ISO (MGI:1337175|PMID:10330403) RGD PMID:10330403 MGI:1337175 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO MGI:2181295 (MGI:2670493|PMID:12923052) RGD PMID:12923052 MGI:2670493 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2148594|MGI:2158470 (MGI:2670493|PMID:12923052)
Ensembl
RGD
PMID:12923052 GO_REF:0000107 MGI:2670493 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2156191 (MGI:3823171|PMID:18985738) RGD PMID:18985738 MGI:3823171 NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
JBrowse link
G Mdfi MyoD family inhibitor involved_in ISO (MGI:4441142|PMID:11238923) RGD PMID:11238923 MGI:4441142 NCBI chr 9:13,156,806...13,175,218
Ensembl chr 9:13,156,866...13,175,217
JBrowse link
G Pax6 paired box 6 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1856155|MGI:1934347 (MGI:1350715|PMID:10588713)
Ensembl
RGD
PMID:10588713 GO_REF:0000107 MGI:1350715 NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
JBrowse link
G Senp2 SUMO specific peptidase 2 IDA RGD PMID:10944533 RGD:1299408 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:9192640)
Ensembl
RGD
PMID:9192640 GO_REF:0000107 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Vax2 ventral anterior homeobox 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2159246|MGI:2388160 (MGI:2157789|PMID:11830578), (MGI:2157790|PMID:11830579)
Ensembl
RGD
PMID:11830578 PMID:11830579 GO_REF:0000107 MGI:2157789 MGI:2157790 NCBI chr 4:116,195,576...116,219,597
Ensembl chr 4:116,195,528...116,219,594
JBrowse link
G Wnt3 Wnt family member 3 acts_upstream_of_or_within ISO MGI:2450902|MGI:2450903 (MGI:2450015|PMID:12569130) RGD PMID:12569130 MGI:2450015 NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099
JBrowse link
negative regulation of Wnt signaling pathway involved in dorsal/ventral axis specification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 IDA RGD PMID:9566905 RGD:68736 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:9192640)
Ensembl
RGD
PMID:9192640 GO_REF:0000107 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
zygotic specification of dorsal/ventral axis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad2 SMAD family member 2 involved_in ISO (PMID:9436979) RGD PMID:9436979 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
JBrowse link
G Smad6 SMAD family member 6 involved_in ISO (PMID:9436979) RGD PMID:9436979 NCBI chr 8:64,450,114...64,519,673
Ensembl chr 8:64,450,114...64,519,763
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    multicellular organismal process 9052
      pattern specification process 499
        axis specification 103
          dorsal/ventral axis specification 13
            Wnt signaling pathway involved in dorsal/ventral axis specification + 2
            dorsal/ventral axis specification, ovarian follicular epithelium + 0
            oocyte dorsal/ventral axis specification + 0
            polarity specification of dorsal/ventral axis 0
            zygotic specification of dorsal/ventral axis 2
Path 2
Term Annotations click to browse term
  biological_process 19512
    developmental process 6931
      anatomical structure development 6346
        multicellular organism development 5773
          pattern specification process 499
            regionalization 390
              dorsal/ventral pattern formation 104
                dorsal/ventral axis specification 13
                  Wnt signaling pathway involved in dorsal/ventral axis specification + 2
                  dorsal/ventral axis specification, ovarian follicular epithelium + 0
                  oocyte dorsal/ventral axis specification + 0
                  polarity specification of dorsal/ventral axis 0
                  zygotic specification of dorsal/ventral axis 2
paths to the root